mRNA_S-dermatodea_contig13550.2059.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig13550.2059.1 vs. uniprot
Match: D7FQ27_ECTSI (Chorismate mutase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ27_ECTSI) HSP 1 Score: 343 bits (879), Expect = 2.800e-106 Identity = 170/205 (82.93%), Postives = 184/205 (89.76%), Query Frame = 3
Query: 3 VRRYMSLEELAFFPMFLPEPILPPLDFSRLLAPNNVNVNEEILRRYISEVVPMICEPGDDEQHGSSVVCDVNALQALSRRVHLGKFVAESKFQEDSRTYQALCRAGDVPGVLALLTNKAVEKKVLHRAFMKASTYGSDVNDPPIL------GEGAADEERNFKVDPHSIVAIYRDFVIPLTKDVEILYLFQRAGYPCPSLEGIHD 599
VRRYMSLEELAFFPMFLPEPILPPLDF RLLAPN+VNVN++IL+RY+SE+VPMICEPGDD+QHGSSVVCDVNALQALSRRVHLGKFVAESKFQEDS+TYQ LCRAGD GVL LLTNKAVE+KVL RAFMKASTYGSD+ND P+ G+GAA E+NFKV+P IV IYRD VIPLTKDVEILYLFQR GYPCPSLEGIHD
Sbjct: 191 VRRYMSLEELAFFPMFLPEPILPPLDFPRLLAPNDVNVNDQILKRYVSEIVPMICEPGDDDQHGSSVVCDVNALQALSRRVHLGKFVAESKFQEDSKTYQDLCRAGDARGVLELLTNKAVEEKVLKRAFMKASTYGSDINDVPVSTEDAKGGDGAAKAEQNFKVNPQFIVDIYRDTVIPLTKDVEILYLFQRTGYPCPSLEGIHD 395
BLAST of mRNA_S-dermatodea_contig13550.2059.1 vs. uniprot
Match: A0A836CAA2_9STRA (Chorismate mutase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAA2_9STRA) HSP 1 Score: 265 bits (678), Expect = 2.510e-79 Identity = 135/201 (67.16%), Postives = 155/201 (77.11%), Query Frame = 3
Query: 3 VRRYMSLEELAFFPMFLPEPILPPLDFSRLLAPNNVNVNEEILRRYISEVVPMICEPGDDEQHGSSVVCDVNALQALSRRVHLGKFVAESKFQEDSRTYQALCRAGDVPGVLALLTNKAVEKKVLHRAFMKASTYGSDVNDPPILGEGAADEERNFKVDPHSIVAIYRDFVIPLTKDVEILYLFQRAGYPCPSLEGIHD*E 605
VRRYMS EEL FFP FLP P+LPPLDF ++LAPN+VN+N+ +L+RY++EVVP IC GDDEQHGSSV+CD+NALQALSRRVH GKFVAESKFQED Y+ LC G+ GV LLTNKAVEKKV+ RA KA+ Y + I EGAA FKV P +I AIY+D +IPLTKDVEILYLFQR GY CPSL GIHD E
Sbjct: 33 VRRYMSPEELPFFPGFLPAPLLPPLDFPQILAPNSVNINDTLLKRYVAEVVPAICGAGDDEQHGSSVLCDINALQALSRRVHFGKFVAESKFQEDGDLYRNLCSEGNARGVNELLTNKAVEKKVIERALNKATAYAQE-----ITWEGAAGSR--FKVRPEAISAIYKDIIIPLTKDVEILYLFQRTGYTCPSLAGIHDSE 226
BLAST of mRNA_S-dermatodea_contig13550.2059.1 vs. uniprot
Match: A0A4D9CWZ2_9STRA (Chorismate mutase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWZ2_9STRA) HSP 1 Score: 227 bits (579), Expect = 1.690e-64 Identity = 127/221 (57.47%), Postives = 151/221 (68.33%), Query Frame = 3
Query: 3 VRRYMSLEELAFFPMFLPEPILPPLDFSRLLAPNNVNVNEEILRRYISEVVPMICEPGDDEQHGSSVVCDVNALQALSRRVHLGKFVAESKFQEDSRTYQALCRAGDVPGVLALLTNKAVEKKVLHRAFMKASTYGSDVNDPPILGEGAADEERNFKVDPHSIVAIYRDFVIPLTKDVEILYLFQRAGYPCPSLEGIHD*ERSRSPPPPAEG-SSYYDFKL 662
VRRY S EE AFFP LP+PIL PL F LLAPN V+VN +IL YI+EVVP +C+ GDDEQHGSSV+ D+ LQALSRR+HLGKFVAE+KFQED Y+AL A DV GV++LLTN AVE +VL RA +KASTYG D I+GE A KV+P I AIYRD +IPLTKDVE+LYLF+R G R PP P G +S+Y ++
Sbjct: 71 VRRYTSPEEHAFFPEHLPDPILTPLQFPALLAPNTVDVNAQILHLYINEVVPAVCKEGDDEQHGSSVLADITLLQALSRRIHLGKFVAETKFQEDEAKYRALVGADDVDGVMSLLTNSAVEARVLARAKLKASTYGQD-----IMGETEA-----CKVEPDVIAAIYRDVIIPLTKDVEVLYLFERVG---------------RKPPAPMPGPASHYRLRV 266
BLAST of mRNA_S-dermatodea_contig13550.2059.1 vs. uniprot
Match: W7U1H9_9STRA (Chorismate mutase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U1H9_9STRA) HSP 1 Score: 226 bits (575), Expect = 7.190e-62 Identity = 126/221 (57.01%), Postives = 151/221 (68.33%), Query Frame = 3
Query: 3 VRRYMSLEELAFFPMFLPEPILPPLDFSRLLAPNNVNVNEEILRRYISEVVPMICEPGDDEQHGSSVVCDVNALQALSRRVHLGKFVAESKFQEDSRTYQALCRAGDVPGVLALLTNKAVEKKVLHRAFMKASTYGSDVNDPPILGEGAADEERNFKVDPHSIVAIYRDFVIPLTKDVEILYLFQRAGYPCPSLEGIHD*ERSRSPPPPAEG-SSYYDFKL 662
VRRY S EE AFFP LP+PIL PL F LLAPN V+VN +IL YI+EVVP +C+ GDDEQHGSSV+ D+ LQALSRR+HLGKFVAE+KFQE+ Y+AL A DV GV++LLTN AVE +VL RA +KASTYG D I+GE A KV+P I AIYRD +IPLTKDVE+LYLF+R G R PP P G +S+Y ++
Sbjct: 237 VRRYTSPEEHAFFPEHLPDPILTPLQFPALLAPNTVDVNAQILHLYINEVVPAVCKEGDDEQHGSSVLADITLLQALSRRIHLGKFVAETKFQEEEAKYRALVGADDVDGVMSLLTNSAVEARVLARAKLKASTYGQD-----IMGETEA-----CKVEPDVIAAIYRDVIIPLTKDVEVLYLFERVG---------------RKPPAPLPGPASHYRLRV 432
BLAST of mRNA_S-dermatodea_contig13550.2059.1 vs. uniprot
Match: A0A6U1P8R8_9STRA (Chorismate mutase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1P8R8_9STRA) HSP 1 Score: 221 bits (562), Expect = 7.050e-61 Identity = 113/202 (55.94%), Postives = 139/202 (68.81%), Query Frame = 3
Query: 3 VRRYMSLEELAFFPMFLPEPILPPLDFSRLLAPNNVNVNEEILRRYISEVVPMICEPGDDEQHGSSVVCDVNALQALSRRVHLGKFVAESKFQEDSRTYQALCRAGDVPGVLALLTNKAVEKKVLHRAFMKASTYGSDVN---DPPILGEGAADEERNFKVDPHSIVAIYRDFVIPLTKDVEILYLFQRAGYPCPSLEGIHD 599
VRRY S EE FF +P PILP L+F LL P++VN+N IL+RY+ EVVP IC GDDEQ+GS+ + D+ ALQALSRR+H G FVAESKF ++ Y+AL RAGD GV LLTN +VE+ VL RAF KASTYG D+ DP E +KV+P I +Y+ +IPLTK+VE+LYLF+R G PCP L GIHD
Sbjct: 176 VRRYTSPEEYPFFADMIPPPILPLLNFPHLLQPHSVNLNHVILKRYVDEVVPRICSAGDDEQYGSTALADITALQALSRRIHYGLFVAESKFLDNPSQYEALVRAGDAKGVYDLLTNASVEELVLQRAFRKASTYGQDITATGDP---------ETTEYKVEPRIIRGLYKSVIIPLTKEVEVLYLFERVGCPCPDLSGIHD 368
BLAST of mRNA_S-dermatodea_contig13550.2059.1 vs. uniprot
Match: A0A7S2SIA4_9STRA (Chorismate mutase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SIA4_9STRA) HSP 1 Score: 192 bits (488), Expect = 3.860e-51 Identity = 94/188 (50.00%), Postives = 128/188 (68.09%), Query Frame = 3
Query: 6 RRYMSLEELAFFPMFLP-EPILPPLDFSRLLAPNNVNVNEEILRRYISEVVPMICEPGDDEQHGSSVVCDVNALQALSRRVHLGKFVAESKFQEDSRTYQALCRAGDVPGVLALLTNKAVEKKVLHRAFMKASTYGSDVNDPPILGEGAADEERNFKVDPHSIVAIYRDFVIPLTKDVEILYLFQRAG 566
RRYMS EE FFP L +P+L PLD+ ++ ++N+N+EI+ YI +VVP IC+PGDD+Q+GSS +CD+ LQALSRR+H+GKFVAESKFQ + + L A D+ G+ LLTN+ VE++V HRA +KA T+G D +D + FKV PH + +YRD +IPLTK V++ YLF R G
Sbjct: 99 RRYMSPEEHPFFPQVLDIDPVLAPLDYPPVVISQDININDEIMSLYIDKVVPSICDPGDDQQYGSSALCDIACLQALSRRIHIGKFVAESKFQHEPELFTKLVEARDIEGINRLLTNELVEERVCHRARLKAVTFGQDA---------FSDTDVGFKVAPHKLFELYRDMIIPLTKQVQVRYLFDRVG 277
BLAST of mRNA_S-dermatodea_contig13550.2059.1 vs. uniprot
Match: A0A0G4FZ06_9ALVE (Chorismate mutase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FZ06_9ALVE) HSP 1 Score: 194 bits (492), Expect = 1.240e-48 Identity = 103/201 (51.24%), Postives = 131/201 (65.17%), Query Frame = 3
Query: 3 VRRYMSLEELAFFPMFLPEPILPPLDFSRLLAPNNVNVNEEILRRYISEVVPMICEPGDDEQHGSSVVCDVNALQALSRRVHLGKFVAESKFQEDSRTYQALCRAGDVPGVLALLTNKAVEKKVLHRAFMKASTYGSDVNDPPILGEGAADEERNFKVDPHSIVAIYRDFVIPLTKDVEILYLFQRAGYPCPSLEGIHD*E 605
+RRY S EE AFFP LP PILPP +L PN +N N +I Y + ++P+IC GDDE++GS+ CD+ LQALS+RVH GKFVAE+KFQED+ TY+ L D G+L LTN+AVE+++L R KASTYG DV A D +FKVDP IVA YRDF+IP+TK+VE+ YL +R G + G H E
Sbjct: 91 MRRYTSPEEHAFFPDDLPIPILPPKAVPEVLNPNLINYNAKIKSYYTNVLLPLICRSGDDEEYGSAATCDITCLQALSKRVHYGKFVAEAKFQEDTETYKQLIAGKDADGILEKLTNRAVEERLLDRVRQKASTYGRDVG-----MTCATDSTLHFKVDPEVIVAAYRDFIIPVTKEVEVDYLLERCGPLKVAFVGEHSSE 286
BLAST of mRNA_S-dermatodea_contig13550.2059.1 vs. uniprot
Match: A0A0G2FBF1_9PEZI (Chorismate mutase n=9 Tax=Diaporthales TaxID=5114 RepID=A0A0G2FBF1_9PEZI) HSP 1 Score: 182 bits (463), Expect = 1.960e-48 Identity = 99/193 (51.30%), Postives = 133/193 (68.91%), Query Frame = 3
Query: 3 VRRYMSLEELAFFPMFLPEPILPPLDFSRLLAPNNVNVNEEILRRYISEVVPMICEP--GDD-----EQHGSSVVCDVNALQALSRRVHLGKFVAESKFQEDSRTYQALCRAGDVPGVLALLTNKAVEKKVLHRAFMKASTYGSDVNDPPILGEGAADEERNFKVDPHSIVAIYRDFVIPLTKDVEILYLFQR 560
+RRY S +E FFP+ L +PILP +D+ ++L PN+VNVN++I R YI + +P +C +D E +GSS CD+ LQALSRR+H GKFVAESKFQ D+ TY + +AGD G+ A +TN AVEK+VL R +KA TYG+D P +G GA E+ VD ++VA+Y+DFVIPLTK+VE+ YL QR
Sbjct: 76 IRRYESPDEYPFFPVSLNKPILPAIDYPKILHPNDVNVNDKIKRFYIDQFLPRVCPDFGREDRGVSLENYGSSATCDIAVLQALSRRIHFGKFVAESKFQSDTETYTRMIKAGDREGIGASITNAAVEKQVLERLKLKAQTYGTD----PSVGVGA--EQSKINVD--AVVAMYKDFVIPLTKEVEVEYLMQR 260
BLAST of mRNA_S-dermatodea_contig13550.2059.1 vs. uniprot
Match: A0A4V5NJF2_9PEZI (Chorismate mutase n=1 Tax=Cryomyces minteri TaxID=331657 RepID=A0A4V5NJF2_9PEZI) HSP 1 Score: 180 bits (457), Expect = 1.340e-47 Identity = 97/193 (50.26%), Postives = 128/193 (66.32%), Query Frame = 3
Query: 3 VRRYMSLEELAFFPMFLPEPILPPLDFSRLLAPNNVNVNEEILRRYISEVVPMIC-------EPGDDEQHGSSVVCDVNALQALSRRVHLGKFVAESKFQEDSRTYQALCRAGDVPGVLALLTNKAVEKKVLHRAFMKASTYGSDVNDPPILGEGAADEERNFKVDPHSIVAIYRDFVIPLTKDVEILYLFQR 560
VRRY + +E FFP L PILPPL++ ++L PNNVNVNE++ R YI V+P C P E +GS+ CDV LQALSRRVH GKFVAE+KF+++ + AL RAGD G+ A +T+ VEKKVL R +KA TYG+D P I EG+ K++ ++VA+Y+D+VIPLTK+VE+ YL QR
Sbjct: 76 VRRYQAPDEYPFFPDALQTPILPPLNYPKILYPNNVNVNEKLKRSYIEHVLPAACAKFNREERPEAQENYGSAATCDVACLQALSRRVHFGKFVAEAKFRKEQERFVALIRAGDREGIGAAITDTKVEKKVLERLRLKAKTYGTD---PSIADEGSG------KINVDAVVAMYKDWVIPLTKEVEVEYLMQR 259
BLAST of mRNA_S-dermatodea_contig13550.2059.1 vs. uniprot
Match: Q0CJD7_ASPTN (Chorismate mutase n=2 Tax=Aspergillus terreus TaxID=33178 RepID=Q0CJD7_ASPTN) HSP 1 Score: 180 bits (456), Expect = 1.840e-47 Identity = 99/193 (51.30%), Postives = 127/193 (65.80%), Query Frame = 3
Query: 3 VRRYMSLEELAFFPMFLPEPILPPLDFSRLLAPNNVNVNEEILRRYISEVVPMIC------EPGD-DEQHGSSVVCDVNALQALSRRVHLGKFVAESKFQEDSRTYQALCRAGDVPGVLALLTNKAVEKKVLHRAFMKASTYGSDVNDPPILGEGAADEERNFKVDPHSIVAIYRDFVIPLTKDVEILYLFQR 560
VRRY S +E FFP L EPIL PL + R+L N+VNVNE I RRY+ +++P IC + G+ E +GSS CDVN LQALSRR+H GKFVAESKFQ+D T+ L +A D G+ A +TN AVE+KVL R +KA TYG+D P G K+D ++VA+Y+++VIPLTK VE+ YL QR
Sbjct: 76 VRRYQSPDEYPFFPDVLEEPILQPLQYPRILHENDVNVNEIIKRRYVEDILPAICPKFGREDRGETQENYGSSATCDVNCLQALSRRIHFGKFVAESKFQKDPETFVKLIKAEDRAGIDAAITNAAVEQKVLERLALKAKTYGTDPAFPTEAGT---------KIDVDAVVAMYKEYVIPLTKVVEVEYLMQR 259 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13550.2059.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig13550.2059.1 >prot_S-dermatodea_contig13550.2059.1 ID=prot_S-dermatodea_contig13550.2059.1|Name=mRNA_S-dermatodea_contig13550.2059.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=196bp MSLEELAFFPMFLPEPILPPLDFSRLLAPNNVNVNEEILRRYISEVVPMIback to top mRNA from alignment at S-dermatodea_contig13550:1815..5836+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig13550.2059.1 ID=mRNA_S-dermatodea_contig13550.2059.1|Name=mRNA_S-dermatodea_contig13550.2059.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4022bp|location=Sequence derived from alignment at S-dermatodea_contig13550:1815..5836+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig13550:1815..5836+ >mRNA_S-dermatodea_contig13550.2059.1 ID=mRNA_S-dermatodea_contig13550.2059.1|Name=mRNA_S-dermatodea_contig13550.2059.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1176bp|location=Sequence derived from alignment at S-dermatodea_contig13550:1815..5836+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |