|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-08_003460.1 |
| Exons | 2 |
| Model size | 978 |
| Cds size | 978 |
| Stop | 0 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig13523.2050.1 >prot_S-dermatodea_contig13523.2050.1 ID=prot_S-dermatodea_contig13523.2050.1|Name=mRNA_S-dermatodea_contig13523.2050.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=326bp
MPHPRRPQRWRAAPSLSPSRRPCRSTWAGARSGGNVRQPLLVHSPPSATG
GGGDGDGSSSSAAGDGGAAGEGGRGGHARYAGGATSDIPSTRSERDAATA
AEAPRQGDPPLTLPPAGHPSEGYIPAWRGVSTPPPVGPLDSGCEDEEPQR
FQGADRGGRRPQTRSASRGGRPRNSNAAERRRIAGRGGGDRRFGAGDRGG
RVPYSPMMAMASDDHTDESSSPISGARANANANAIARGLPARRHRGRGGA
ERVAVLEENFGGVYGDSRGMANAGRVEGDGRQLLPDDLRFMHARRLEVEA
QHQGPRRSLSDFLREVEEMVRAQRAD back to topmRNA from alignment at S-dermatodea_contig13523:4789..6318- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig13523.2050.1 ID=mRNA_S-dermatodea_contig13523.2050.1|Name=mRNA_S-dermatodea_contig13523.2050.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1530bp|location=Sequence derived from alignment at S-dermatodea_contig13523:4789..6318- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCCACACCCACGTCGACCCCAGAGATGGAGAGCAGCCCCCTCTCTTTC
TCCGTCCCGACGTCCCTGCAGGAGTACATGGGCAGGTGCGGTCTGTGGTG
GCATGTGTATCGCGTGGCTCACGAGAAAACGAATTTGTATTCGTCTGTCG
TTAGTGTCTACCGCCGAAGCGGTGGTGTTGGTGTGTGTGTGGGTTTCCCC
GGTTGAATACTTGTACTAACACTATCGTCAATACTAATACTATCATACTG
CAGTGCTGTGGCTTGCACATAAACCATAAACCTCTGAAAGGACATATCAT
ACGATACTTTGACGATTGACACAATTCCATTCGTAAAATTATGTAAATAA
AGTATTCACCAGCAGTGTTTTTGACGTGTGATATGAAATGGTTCTAAAAT
TTTTATCGTAATTTGCGAAGGCCAGCCCAGCTCGCCAGCCACCTTACCAG
CAGCAACAACAACAACATCAACAAACGACGTGGCAAGAGAGTGGCGATCG
ACCGAGTACAACCTCTCTCCCCCTCTCTTCGCTAAACCCCACCAGGTACA
TGCACAGGGACGAACGCACGCCAAGCGGAGGCCTGATTCAAGGGGCTGCT
CTATCTCCCGCGTCGTTCCCGATACGTCACTGGTTCGACGAGCGCAGCGG
CGGAAACGTCCGCCAACCATTGCTGGTACATTCCCCACCATCAGCGACAG
GCGGCGGAGGCGACGGGGACGGGAGCAGCAGTAGTGCCGCCGGCGATGGT
GGCGCTGCCGGCGAAGGTGGTCGTGGTGGCCATGCCAGATACGCTGGCGG
GGCAACCTCCGACATTCCCTCCACAAGAAGCGAGAGGGACGCAGCAACCG
CGGCGGAAGCGCCTCGACAAGGCGACCCCCCGCTCACGCTCCCCCCGGCG
GGCCACCCGTCCGAGGGCTACATCCCGGCGTGGCGCGGTGTGTCGACTCC
TCCGCCGGTCGGGCCTCTTGATTCCGGCTGTGAAGACGAAGAGCCGCAGC
GATTTCAAGGCGCCGACCGCGGGGGGCGCAGGCCGCAAACCCGTTCGGCT
TCACGGGGCGGGCGACCTCGGAACTCGAACGCGGCGGAGAGGAGAAGGAT
CGCGGGTCGTGGCGGCGGCGATCGGCGATTTGGGGCGGGGGACAGAGGAG
GGCGTGTGCCGTATTCCCCCATGATGGCTATGGCAAGCGACGACCACACG
GACGAGTCCTCCTCCCCAATCTCAGGAGCACGCGCGAACGCGAACGCAAA
CGCGATCGCTAGGGGCTTGCCCGCGAGGCGTCACCGGGGACGGGGCGGGG
CGGAGCGCGTGGCGGTTCTCGAGGAGAATTTCGGTGGCGTTTACGGCGAC
TCACGCGGTATGGCGAACGCCGGTAGGGTGGAGGGTGACGGGCGGCAGTT
GCTGCCAGACGACCTACGCTTTATGCACGCTCGGAGGCTGGAGGTCGAAG
CCCAGCATCAGGGGCCGCGGCGGTCCCTCTCGGATTTCCTGAGGGAGGTC
GAGGAGATGGTGCGGGCGCAACGGGCCGAT back to topCoding sequence (CDS) from alignment at S-dermatodea_contig13523:4789..6318- >mRNA_S-dermatodea_contig13523.2050.1 ID=mRNA_S-dermatodea_contig13523.2050.1|Name=mRNA_S-dermatodea_contig13523.2050.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1956bp|location=Sequence derived from alignment at S-dermatodea_contig13523:4789..6318- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCCACACCCACGTCGACCCCAGAGATGGAGAGCAGCCCCCTCTCTTTC
TCCGTCCCGACGTCCCTGCAGGAGTACATGGGCAGGTGCGATGCCACACC
CACGTCGACCCCAGAGATGGAGAGCAGCCCCCTCTCTTTCTCCGTCCCGA
CGTCCCTGCAGGAGTACATGGGCAGGTGCGCGCAGCGGCGGAAACGTCCG
CCAACCATTGCTGGTACATTCCCCACCATCAGCGACAGGCGGCGGAGGCG
ACGGGGACGGGAGCAGCAGTAGTGCCGCCGGCGATGGTGGCGCTGCCGGC
GAAGGTGGTCGTGGTGGCCATGCCAGATACGCTGGCGGGGCAACCTCCGA
CATTCCCTCCACAAGAAGCGAGAGGGACGCAGCAACCGCGGCGGAAGCGC
CTCGACAAGGCGACCCCCCGCTCACGCTCCCCCCGGCGGGCCACCCGTCC
GAGGGCTACATCCCGGCGTGGCGCGGTGTGTCGACTCCTCCGCCGGTCGG
GCCTCTTGATTCCGGCTGTGAAGACGAAGAGCCGCAGCGATTTCAAGGCG
CCGACCGCGGGGGGCGCAGGCCGCAAACCCGTTCGGCTTCACGGGGCGGG
CGACCTCGGAACTCGAACGCGGCGGAGAGGAGAAGGATCGCGGGTCGTGG
CGGCGGCGATCGGCGATTTGGGGCGGGGGACAGAGGAGGGCGTGTGCCGT
ATTCCCCCATGATGGCTATGGCAAGCGACGACCACACGGACGAGTCCTCC
TCCCCAATCTCAGGAGCACGCGCGAACGCGAACGCAAACGCGATCGCTAG
GGGCTTGCCCGCGAGGCGTCACCGGGGACGGGGCGGGGCGGAGCGCGTGG
CGGTTCTCGAGGAGAATTTCGGTGGCGTTTACGGCGACTCACGCGGTATG
GCGAACGCCGGTAGGGTGGAGGGTGACGGGCGGCAGTTGCTGCCAGACGA
CCTACGCTTTATGCACGCTCGGAGGCTGGAGGTCGAAGCCCAGCATCAGG
GGCCGCGGCGGTCCCTCTCGGATTTCCTGAGGGAGGTCGAGGAGATGGTG
CGGGCGCAACGGGCCGATCGCAGCGGCGGAAACGTCCGCCAACCATTGCT
GGTACATTCCCCACCATCAGCGACAGGCGGCGGAGGCGACGGGGACGGGA
GCAGCAGTAGTGCCGCCGGCGATGGTGGCGCTGCCGGCGAAGGTGGTCGT
GGTGGCCATGCCAGATACGCTGGCGGGGCAACCTCCGACATTCCCTCCAC
AAGAAGCGAGAGGGACGCAGCAACCGCGGCGGAAGCGCCTCGACAAGGCG
ACCCCCCGCTCACGCTCCCCCCGGCGGGCCACCCGTCCGAGGGCTACATC
CCGGCGTGGCGCGGTGTGTCGACTCCTCCGCCGGTCGGGCCTCTTGATTC
CGGCTGTGAAGACGAAGAGCCGCAGCGATTTCAAGGCGCCGACCGCGGGG
GGCGCAGGCCGCAAACCCGTTCGGCTTCACGGGGCGGGCGACCTCGGAAC
TCGAACGCGGCGGAGAGGAGAAGGATCGCGGGTCGTGGCGGCGGCGATCG
GCGATTTGGGGCGGGGGACAGAGGAGGGCGTGTGCCGTATTCCCCCATGA
TGGCTATGGCAAGCGACGACCACACGGACGAGTCCTCCTCCCCAATCTCA
GGAGCACGCGCGAACGCGAACGCAAACGCGATCGCTAGGGGCTTGCCCGC
GAGGCGTCACCGGGGACGGGGCGGGGCGGAGCGCGTGGCGGTTCTCGAGG
AGAATTTCGGTGGCGTTTACGGCGACTCACGCGGTATGGCGAACGCCGGT
AGGGTGGAGGGTGACGGGCGGCAGTTGCTGCCAGACGACCTACGCTTTAT
GCACGCTCGGAGGCTGGAGGTCGAAGCCCAGCATCAGGGGCCGCGGCGGT
CCCTCTCGGATTTCCTGAGGGAGGTCGAGGAGATGGTGCGGGCGCAACGG
GCCGAT back to top
|