mRNA_S-dermatodea_contig13450.2027.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig13450.2027.1
Unique NamemRNA_S-dermatodea_contig13450.2027.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig13450.2027.1 vs. uniprot
Match: A0A6H5KE40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE40_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 6.500e-37
Identity = 95/264 (35.98%), Postives = 145/264 (54.92%), Query Frame = 3
Query:    3 FTKLGDSILGSGVEDTNLLDVVLSQGRRLELYLANSAPSESVQDRTNAAFLKAFNTGLFKHERN-LETFIGPKRLPSGLPMDTVPSGVQAAVAKGGATVFSVMKSATADFGYKMESNEGDINQLFLNAPSSNPSYP----DIPCWGQLLVFDLPGEALKSLSEDERDEQLVRLIRIADHSQLRAMLVVGVELCRPKAALYMRVSDSCPFFYMAWETGRDIDGMAIGISIPKAATGRQALLDALKLGGDGTKHTVCVSVAKVRKK 779
            FT  GD++LG GVE T + +  +S+GRR+E Y+ + +   S+Q + ++ F KA ++G+F+  R   E  +GP   P+GLP  TVP  V  A+    A +       TA +     + +    +L    P      P    DIP WG+L+V+  P  A  SL+++E DE+ VRL++IA ++QL+ ML  G E C P+AALY+RV+ +CP F++  E+    D + I   IP+    R  +L+ L   GDG+     VSV  VR K
Sbjct:  118 FTNAGDTVLGVGVESTTVAEDAISRGRRVEFYVTDESKRASLQAKISSTFHKAHSSGMFQSRRGGKEVVVGPNCSPAGLPPSTVPERVSEALK---AALEKEPDVLTASY-----TGDHHSPKLVTKKPRRASKVPKEVSDIPVWGELIVYPSPQAAKDSLTQEEVDEEYVRLLQIATNAQLQLMLKPGTERCTPEAALYLRVAATCPVFWVRSESKTKAD-LDISCDIPQRGL-RANILETLSSSGDGSSGGA-VSVRHVRNK 370          
BLAST of mRNA_S-dermatodea_contig13450.2027.1 vs. uniprot
Match: A0A6H5KEI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEI5_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 1.150e-35
Identity = 98/281 (34.88%), Postives = 152/281 (54.09%), Query Frame = 3
Query:    3 FTKLGDSILGSGVEDTNLLDVVLSQGRRLELYLANSAPSESVQDRTNAAFLKAFNTGLFKHERN-LETFIGPKRLPSGLPMDTVPSGVQAAVAKGGATVFSVMKSA--------TADFGYKME-------SNEGDIN--QLFLNAPSSNPSYP----DIPCWGQLLVFDLPGEALKSLSEDERDEQLVRLIRIADHSQLRAMLVVGVELCRPKAALYMRVSDSCPFFYMAWETGRDIDGMAIGISIPKAATGRQALLDALKLGGDGTKHTVCVSVAKVRKK 779
            FT  GD++LG GVE T + +  +S+GRR+E Y+ + +   S+Q + +++F KA ++G+F+  R   E  +GP  LP+GLP   VP  V  A         S +K+A        TA +            + +GD +  +L +  P      P    DIP WG+L+V+  P  A  SL+++E DE+ VRL+RIA ++QL+ ML  G E C P+AALY+RV+ +CP F++  E+    D + I   IP+    R  +L+ +   GDG+  +  V V  VR K
Sbjct:  260 FTNAGDTVLGVGVESTTVAEDAISRGRRVEFYVTDESKRASLQAKISSSFHKAHSSGMFQSRRGGKEVVVGPNCLPAGLPPSNVPERVSVAA-------HSTLKAALEKEPDVLTASYTVAQTIAKTTHLTLQGDHHSPKLVMKKPRRASKAPKEVSDIPVWGELIVYPSPQAAKDSLTQEEVDEEYVRLLRIATNAQLQLMLEPGTERCTPEAALYLRVAATCPVFWVRSESKTKAD-LDISCDIPQRGL-RANILETVSSSGDGSSGSA-VRVCHVRNK 530          
BLAST of mRNA_S-dermatodea_contig13450.2027.1 vs. uniprot
Match: A0A6H5LBJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBJ9_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 4.390e-35
Identity = 100/311 (32.15%), Postives = 153/311 (49.20%), Query Frame = 3
Query:    3 FTKLGDSILGSGVEDTNLLDVVLSQGRRLELYLANSAPSESVQDRTNAAFLKAFNTGLFKHERNL--ETFIGPKRLPSGLPMDTVPSGV---------QAAVAKGGATV-FSVMKSATADFGYKMESNEG--DINQLFLNAPSSNPSYP----DIPCWGQLLVFDLPGEALKSLSEDERDEQLVRLIRIADHSQLRAMLVVGVELCRPKAALYMRVSDSCPFFYMAWETGRDIDGMAIGISIPKAATGRQALLDALKLGGDGTKHTVCVSVAKVRKKHAKDASSRRPLHILPGDVVVGGPGFKHTHLSSET 881
            +T  GD++     E  N+++  L + RR+E+++AN    E V+    A+F +A+  G +K   +L  E  I P  LP GL  + +P  V         Q   A G A     V  +   +FGY +ES EG    +   L  P  +  Y     D+P WGQL VF+   EA  SLS DER++Q VRL+ +A++ QL+ MLV G E+C P A LY+RV+ +CP +YM W        +     +P++ +  + L    ++ G      +   V + R K       R PL++LPG  VV   GF+     S++
Sbjct:  513 YTHAGDTVASLSAERHNVVEAALERSRRVEVFVANPNSKEEVRKNLLASFSRAYKAGKWKASTSLAQERVISPSCLPLGLEANVIPHEVHRFVDSTMNQEGPAMGEAEASLRVATTLAKEFGYSLESPEGWRSGSSEALLLPRRDMDYHVNSHDLPAWGQLEVFNSRPEAFHSLSVDEREDQRVRLLHVANNVQLKRMLVPGKEVCGPGAELYLRVAPTCPLYYMRWTNDVKQATVEFTSKVPQSGSRAEVLGPFSQVEGHAFATPMIGRVFRARSK----TDPRSPLNVLPGFAVVRSQGFEVRESDSDS 819          
BLAST of mRNA_S-dermatodea_contig13450.2027.1 vs. uniprot
Match: A0A6H5JDB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDB1_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 2.260e-34
Identity = 94/281 (33.45%), Postives = 146/281 (51.96%), Query Frame = 3
Query:    3 FTKLGDSILGSGVEDTNLLDVVLSQGRRLELYLANSAPSESVQDRTNAAFLKAFNTGLFKHERN-LETFIGPKRLPSGLPMDTVPSGV----------QAAVAKGGATVFSVMKSATADFGYKMESNEGDINQLFLNAPSSNPSYP----DIPCWGQLLVFDLPGEALKSLSEDERDEQLVRLIRIADHSQLRAMLVVGVELCRPKAALYMRVSDSCPFFYMAWETGRDIDGMAIGISIPKAATGRQALLDALKLGGDGTKHTVCVSVAKVRKKHAKDASS 800
            FT  GD++LG GVE T + +  +S+GRR+E Y+ + +   S+Q + ++ F KA ++G+F+  R   E  +GP  LP+GLP  TV              +  V     TV   +   T    +     +    +L +  P      P    DIP WG+L+V+  P  A  SL+++E DE+ VRL+RIA ++QL+ ML  G E C P+AALY+RV+ +CP F++ WE+    D + I   IP+    R  +L +    GDG+      S   VR +H ++  S
Sbjct:  870 FTNAGDTVLGVGVESTTVAEDAISRGRRVEFYVTDESKRASLQAKISSTFHKAHSSGMFQSRRGGKEVVVGPNCLPAGLPPSTVXXXXXXXXXXXXEKEPDVLTASYTVAQTIAKTT----HLTLQGDHHSPKLVMKKPRRASKAPKEVSDIPVWGELIVYPSPQAAKDSLTQEEVDEEYVRLLRIATNAQLQLMLEPGTERCTPEAALYLRVAATCPVFWVRWESKTKAD-LDISCDIPQRGL-RANILASFSSSGDGS------SGGAVRVRHVRNKPS 1138          
BLAST of mRNA_S-dermatodea_contig13450.2027.1 vs. uniprot
Match: A0A6H5K708_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K708_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 4.470e-34
Identity = 96/273 (35.16%), Postives = 147/273 (53.85%), Query Frame = 3
Query:    3 FTKLGDSILGSGVEDTNLLDVVLSQGRRLELYLANSAPSESVQDRTNAAFLKAFNTGLFKHERN-LETFIGPKRLPSGLPMDTVPSGVQAAVAKGGATVFSVMKSATADFGYKME-------SNEGDIN--QLFLNAPSSNPSYP----DIPCWGQLLVFDLPGEALKSLSEDERDEQLVRLIRIADHSQLRAMLVVGVELCRPKAALYMRVSDSCPFFYMAWETGRDIDGMAIGISIPKAATGRQALLDALKLGGDGTKHTVCVSVAKVRKK 779
            FT  GD++LG GVE T + +  +S+GRR+E Y+ + +   S+Q + +++F KA ++G+F+  R   E  +GP  LP+GLP  TVP  V  A+    A +       TA F            + +GD +  +L +  P      P    DIP WG+L+V+  P  A  SL+++E DE+ VRL+RIA ++QL+  L  G E C P+AALY+RV+ +CP  ++  E+    D + I   IP+    R  +L+     GDG+     V V  VR K
Sbjct:  278 FTNAGDTVLGVGVESTTVAEDAISRGRRVEFYVTDVSKRASLQAKISSSFHKAHSSGMFQSRRGGKEVVVGPNCLPAGLPPSTVPERVSEALK---AALEKEPDVPTASFTVAQTIAKRTHLTLQGDHHSPKLVMKKPRRASKAPKEVSDIPVWGELIVYPSPQAAKDSLTQEEVDEEYVRLLRIATNAQLQLTLESGTERCTPEAALYLRVAATCPVLWVRSESKTKAD-LDISCDIPQRGL-RANILETFSSSGDGSSGGA-VKVRHVRNK 544          
BLAST of mRNA_S-dermatodea_contig13450.2027.1 vs. uniprot
Match: A0A6H5KBS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBS8_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 3.600e-23
Identity = 58/158 (36.71%), Postives = 87/158 (55.06%), Query Frame = 3
Query:  408 DIPCWGQLLVFDLPGEALKSLSEDERDEQLVRLIRIADHSQLRAMLVVGVELCRPKAALYMRVSDSCPFFYMAWETGRDIDGMAIGISIPKAATGRQALLDALKLGGDGTKHTVCVSVAKVRKKHAKDASSRRPLHILPGDVVVGGPGFKHTHLSSET 881
            D+P WGQL VF+   EA +SLS DER++Q VRL+ +A++ QL+ MLV G E+C P A LY+RV+ +CP +YM W        +     +P++ +  + L    ++ G      V   V + R K       R PL++LPG  VV   GF+     S++
Sbjct:    9 DLPAWGQLEVFNSRPEAFRSLSVDEREDQRVRLLHVANNVQLKRMLVPGKEVCGPGAELYLRVAPTCPLYYMRWTNDVKQATVEFTSKVPQSGSRAEVLGPFSQVEGQAFATPVIGRVFRARSK----TDPRSPLNVLPGFAVVRSQGFEVRESDSDS 162          
BLAST of mRNA_S-dermatodea_contig13450.2027.1 vs. uniprot
Match: A0A6H5KW52_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW52_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 3.710e-20
Identity = 53/131 (40.46%), Postives = 79/131 (60.31%), Query Frame = 3
Query:  408 DIPCWGQLLVFDLPGEALKSLSEDERDEQLVRLIRIADHSQLRAMLVVGVELCRPKAALYMRVSDSCPFFYMAWETGRDIDGMAIGISIPKAATGRQALLDALKLGGDGTKHTVCVSVAKVRKKHAKDASS 800
            DIP WG+L+V+  P  A  SL+++E DE+ VRL+RIA ++QL+ ML  G E C P+AALY+RV+ +CP F++ WE+    D + I   IP+    R  +L +    GDG+      S   VR +H ++  S
Sbjct:   16 DIPVWGELIVYPSPQAAKDSLTQEEVDEEYVRLLRIATNAQLQLMLEPGTERCTPEAALYLRVAATCPVFWVRWESKTKAD-LDISCDIPQRGL-RANILASFSSSGDGS------SGGAVRVRHVRNKPS 138          
BLAST of mRNA_S-dermatodea_contig13450.2027.1 vs. uniprot
Match: A0A6H5JYC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYC2_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 2.130e-18
Identity = 62/191 (32.46%), Postives = 95/191 (49.74%), Query Frame = 3
Query:    3 FTKLGDSILGSGVEDTNLLDVVLSQGRRLELYLANSAPSESVQDRTNAAFLKAFNTGLFKHER-NLETFIGPKRLPSGLPMDTVPSGVQAAVAKGGATVFSVMKSATADFGYKMESNEGDINQLFLNAPSSNPSY---------------PDIPCWGQLLVFDLPGEALKSLSEDERDEQLVRLIRIADHS 527
            FT  GD++LG GVE T + +  +S+GRR+E Y+ + +   S+Q + ++ F KA ++G+F+  R   E  +GP  LP+GLP  TVP  V  A+              TA   Y +         L L     +P                  DIP WG+L+V+     A  SL+++E DE+ VRL+RIA ++
Sbjct:  278 FTNAGDTVLGVGVESTTVAEDAISRGRRVEFYVTDESKRASLQAKISSTFHKAHSSGMFQSRRVGKEVVVGPNCLPAGLPPSTVPERVSGALKAALEKEPDEPDVLTAS--YTVAQTIAKTTHLTLQGDHHSPKLMTKKPRRASKARKEVSDIPVWGELIVYPSAQAAKDSLTQEEVDEEYVRLLRIATNA 466          
BLAST of mRNA_S-dermatodea_contig13450.2027.1 vs. uniprot
Match: A0A6H5JUE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUE7_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 7.230e-18
Identity = 40/74 (54.05%), Postives = 54/74 (72.97%), Query Frame = 3
Query:  408 DIPCWGQLLVFDLPGEALKSLSEDERDEQLVRLIRIADHSQLRAMLVVGVELCRPKAALYMRVSDSCPFFYMAW 629
            D+P WGQL VF+   EA +SLS DER++Q VRL+ +A++ QL+ MLV G E C P A LY+RV+ +CP +YM W
Sbjct:    9 DLPAWGQLEVFNSRPEAFRSLSLDEREDQRVRLLHVANNVQLKRMLVPGKEGCGPGAELYLRVAPTCPLYYMRW 82          
BLAST of mRNA_S-dermatodea_contig13450.2027.1 vs. uniprot
Match: A0A6H5K9C3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9C3_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 4.580e-11
Identity = 63/215 (29.30%), Postives = 96/215 (44.65%), Query Frame = 3
Query:  198 ETFIGPKRLPSGLPMDTVPSGV----------QAAVAKGGATVFSVMKSATADFGYKMESNEGDINQLFLNAPSSNPSYP----DIPCWGQLLVFDLPGEALKSLSEDERDEQLVRLIRIADHSQLRAMLVVGVELCRPKAALYMRVSDSCPFFYMAWETGRDIDGMAIGISIPKAATGRQALLDALKLGGDGTKHTVCVSVAKVRKKHAKDASS 800
            E  +GP  LP+GLP  TV              +  V     TV   +   T    +     +    +L +  P      P    +IP WG+ +V+  P  A  SL+++E DE+ VRL+RIA ++QL+ ML  G E       LY RV+ +CP F++  E+    D + I   IP+    R  +L+     GDG+      S   VR +H ++  S
Sbjct:   10 EVVVGPNCLPAGLPPSTVXXXXXXXXXXXXEKEPDVLTASYTVAQTIAKTT----HLTLQGDHHSPKLVMKKPRRASKAPKEVSNIPVWGESIVYPSPQAAKDSLTQEEVDEEYVRLLRIATNAQLQLMLEPGTE------PLYWRVAATCPVFWVRSESKTKAD-LDISCDIPQRGL-RANILETFSSSGDGS------SGGAVRVRHVRNKPS 206          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13450.2027.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5KE40_9PHAE6.500e-3735.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEI5_9PHAE1.150e-3534.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LBJ9_9PHAE4.390e-3532.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JDB1_9PHAE2.260e-3433.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K708_9PHAE4.470e-3435.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBS8_9PHAE3.600e-2336.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KW52_9PHAE3.710e-2040.46Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYC2_9PHAE2.130e-1832.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUE7_9PHAE7.230e-1854.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9C3_9PHAE4.580e-1129.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13450contigS-dermatodea_contig13450:497..2418 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size977
Cds size723
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13450.2027.1prot_S-dermatodea_contig13450.2027.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig13450 512..1499 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924286.5617175-UTR-S-dermatodea_contig13450:496..5111622924286.5617175-UTR-S-dermatodea_contig13450:496..511Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig13450 497..511 -
1694079151.8033435-UTR-S-dermatodea_contig13450:496..5111694079151.8033435-UTR-S-dermatodea_contig13450:496..511Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig13450 497..511 -
1622924286.588153-UTR-S-dermatodea_contig13450:1499..15561622924286.588153-UTR-S-dermatodea_contig13450:1499..1556Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig13450 1500..1556 -
1694079151.8333845-UTR-S-dermatodea_contig13450:1499..15561694079151.8333845-UTR-S-dermatodea_contig13450:1499..1556Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig13450 1500..1556 -
1622924286.5966372-UTR-S-dermatodea_contig13450:2236..24181622924286.5966372-UTR-S-dermatodea_contig13450:2236..2418Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig13450 2237..2418 -
1694079151.8497226-UTR-S-dermatodea_contig13450:2236..24181694079151.8497226-UTR-S-dermatodea_contig13450:2236..2418Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig13450 2237..2418 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924286.570954-CDS-S-dermatodea_contig13450:511..11291622924286.570954-CDS-S-dermatodea_contig13450:511..1129Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13450 512..1129 -
1694079151.8131354-CDS-S-dermatodea_contig13450:511..11291694079151.8131354-CDS-S-dermatodea_contig13450:511..1129Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13450 512..1129 -
1622924286.5797179-CDS-S-dermatodea_contig13450:1394..14991622924286.5797179-CDS-S-dermatodea_contig13450:1394..1499Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13450 1395..1499 -
1694079151.8245997-CDS-S-dermatodea_contig13450:1394..14991694079151.8245997-CDS-S-dermatodea_contig13450:1394..1499Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13450 1395..1499 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig13450.2027.1

>prot_S-dermatodea_contig13450.2027.1 ID=prot_S-dermatodea_contig13450.2027.1|Name=mRNA_S-dermatodea_contig13450.2027.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=241bp
MDTVPSGVQAAVAKGGATVFSVMKSATADFGYKMESNEGDINQLFLNAPS
SNPSYPDIPCWGQLLVFDLPGEALKSLSEDERDEQLVRLIRIADHSQLRA
MLVVGVELCRPKAALYMRVSDSCPFFYMAWETGRDIDGMAIGISIPKAAT
GRQALLDALKLGGDGTKHTVCVSVAKVRKKHAKDASSRRPLHILPGDVVV
GGPGFKHTHLSSETEGGEGYELEEMGEAVDEPSDNEEYED*
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mRNA from alignment at S-dermatodea_contig13450:497..2418-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig13450.2027.1 ID=mRNA_S-dermatodea_contig13450.2027.1|Name=mRNA_S-dermatodea_contig13450.2027.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1922bp|location=Sequence derived from alignment at S-dermatodea_contig13450:497..2418- (Saccorhiza dermatodea SderLu1190fm monoicous)
GGTTCACCAAGCTTGGCGACTCTATTCTGGGGAGTGGTGTTGAGGACACG AACCTGCTGGACGTGGTTTTGAGCCAAGGTCGGCGTCTCGAGCTATACTT GGCAAACAGCGCCCCGTCAGAGTCTGTTCAGGACCGGACCAACGCGGCTT TCCTGAAGGCGTTTAACACCGGACTCTTCAAGGTGCGCAGGCCCGGAGTT TTTTATGGATTTTACACGAAATCCGATTCGTATTTTGTAGGGTAGACGAG CTCAGGCCTGGTCTCGAGCCGGCCTAAGTTTTTTCATAACCGGGTCACCA AAGGTGGTAACGTATGATCTCGTATATCGTACCCGAAATGGTCAACGGAA CCGCGTGGTGTTCCCGACGTCGTCTAGTAAGTTTGGAAATAACCCGGTCC TGTCCTTTCCCCTTTTGTTCGGTTATGATTCGTATGTGTCCTTGTGAACT GGCAGGGTTTGTTATGTTTGCCACCACTTTTTTTCCATCTCATTCCACAG CATTGCATCTCTGCGCTTTGTTCGTGGTTTTGGGAAAGTTAGAGATGTAT TAAGTCATTCCTATCGACATGTGTTTTCAACCACGAAAGGTGATACTACT CAGCGAGCCGTTTTTCGATTCTGCTGCTTCGAGATTTTACCGAAATTGTA ACAAAGATTTGGTGGAGTCAGCCATATAAAAAATATTCGTGGTTTTTGAT CCGACGATAAAACGATATTTGTTTAACCCTATGTTTGAACAAATTTCGTT TTGGATACGTTTTCGTTAGGCTTCTATGATAGACTGGGTCATTAATTATC ACCTAGATCCGTCTCCAACACAGCTGTGCCATCCGTTTTCCTCGGCCCAA ACGCAACCAAAGCACGAGCGGAACCTCGAGACATTCATCGGCCCTAAACG TCTACCATCTGGGCTTCCCATGGACACGGTGCCTTCTGGAGTGCAAGCGG CGGTTGCCAAAGGTGGGGCAACGGTTTTTTCCGTCATGAAGAGTGCCACT GCGGACTTTGGCTACAAGATGGAGGTGGAGCATACTTAATTTCTGGGTTG TGTGTAGATCTTCAGTGCCGTTTTCATCCCCTTTCCTCGGCCTGTACGTA TGATATTTGTTTGTCTGCTCTCAGTGGCAATGAAAATATGACAGTCTGGA GCCGCAGCCTGTATGTACAAGGTCGTTACGAACGCTCAAGCATCATCTAT CTGATCCAAATCCGTCGCTACTTCGTTGCTCATGTACGTCAAACTGACAT TAAAATCCTTTGCGCAACTCGCTCGTCTTGCCTCCAAAGTCTAACGAAGG GGATATTAACCAACTATTCCTCAACGCCCCCTCCTCCAATCCTTCCTACC CCGACATTCCGTGTTGGGGTCAGCTCCTGGTATTCGATTTGCCCGGAGAA GCTCTGAAGTCGCTTTCAGAGGACGAACGCGACGAGCAGCTAGTGCGCCT CATACGGATAGCAGACCACAGCCAGCTGAGGGCTATGCTGGTGGTTGGCG TAGAGCTCTGCCGCCCTAAGGCAGCCCTCTACATGAGGGTGTCAGATTCG TGTCCTTTTTTCTACATGGCATGGGAAACTGGCCGGGACATCGACGGGAT GGCCATAGGGATCTCTATCCCGAAGGCTGCCACCGGTCGGCAGGCGCTGT TAGACGCCCTCAAGCTTGGTGGCGATGGGACGAAACACACCGTGTGTGTC AGCGTGGCAAAGGTCCGTAAAAAACACGCCAAGGATGCATCCAGTCGCCG CCCCCTTCACATTCTCCCTGGGGATGTAGTCGTTGGGGGGCCGGGCTTTA AGCACACGCATTTGTCAAGCGAAACGGAGGGCGGGGAGGGCTACGAACTG GAGGAAATGGGGGAGGCGGTCGATGAACCCTCTGATAATGAAGAATACGA GGATTAGAGAAGTAAAGCCAAC
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Coding sequence (CDS) from alignment at S-dermatodea_contig13450:497..2418-

>mRNA_S-dermatodea_contig13450.2027.1 ID=mRNA_S-dermatodea_contig13450.2027.1|Name=mRNA_S-dermatodea_contig13450.2027.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1446bp|location=Sequence derived from alignment at S-dermatodea_contig13450:497..2418- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGACACGGTGCCTTCTGGAGTGCAAGCGGCGGTTGCCAAAGGTGGGGC
AACGGTTTTTTCCGTCATGAAGAGTGCCACTGCGGACTTTGGCTACAAGA
TGGAGATGGACACGGTGCCTTCTGGAGTGCAAGCGGCGGTTGCCAAAGGT
GGGGCAACGGTTTTTTCCGTCATGAAGAGTGCCACTGCGGACTTTGGCTA
CAAGATGGAGTCTAACGAAGGGGATATTAACCAACTATTCCTCAACGCCC
CCTCCTCCAATCCTTCCTACCCCGACATTCCGTGTTGGGGTCAGCTCCTG
GTATTCGATTTGCCCGGAGAAGCTCTGAAGTCGCTTTCAGAGGACGAACG
CGACGAGCAGCTAGTGCGCCTCATACGGATAGCAGACCACAGCCAGCTGA
GGGCTATGCTGGTGGTTGGCGTAGAGCTCTGCCGCCCTAAGGCAGCCCTC
TACATGAGGGTGTCAGATTCGTGTCCTTTTTTCTACATGGCATGGGAAAC
TGGCCGGGACATCGACGGGATGGCCATAGGGATCTCTATCCCGAAGGCTG
CCACCGGTCGGCAGGCGCTGTTAGACGCCCTCAAGCTTGGTGGCGATGGG
ACGAAACACACCGTGTGTGTCAGCGTGGCAAAGGTCCGTAAAAAACACGC
CAAGGATGCATCCAGTCGCCGCCCCCTTCACATTCTCCCTGGGGATGTAG
TCGTTGGGGGGCCGGGCTTTAAGCACACGCATTTGTCAAGCGAAACGGAG
GGCGGGGAGGGCTACGAACTGGAGGAAATGGGGGAGGCGGTCGATGAACC
CTCTGATAATGAAGAATACGAGGATTAGTCTAACGAAGGGGATATTAACC
AACTATTCCTCAACGCCCCCTCCTCCAATCCTTCCTACCCCGACATTCCG
TGTTGGGGTCAGCTCCTGGTATTCGATTTGCCCGGAGAAGCTCTGAAGTC
GCTTTCAGAGGACGAACGCGACGAGCAGCTAGTGCGCCTCATACGGATAG
CAGACCACAGCCAGCTGAGGGCTATGCTGGTGGTTGGCGTAGAGCTCTGC
CGCCCTAAGGCAGCCCTCTACATGAGGGTGTCAGATTCGTGTCCTTTTTT
CTACATGGCATGGGAAACTGGCCGGGACATCGACGGGATGGCCATAGGGA
TCTCTATCCCGAAGGCTGCCACCGGTCGGCAGGCGCTGTTAGACGCCCTC
AAGCTTGGTGGCGATGGGACGAAACACACCGTGTGTGTCAGCGTGGCAAA
GGTCCGTAAAAAACACGCCAAGGATGCATCCAGTCGCCGCCCCCTTCACA
TTCTCCCTGGGGATGTAGTCGTTGGGGGGCCGGGCTTTAAGCACACGCAT
TTGTCAAGCGAAACGGAGGGCGGGGAGGGCTACGAACTGGAGGAAATGGG
GGAGGCGGTCGATGAACCCTCTGATAATGAAGAATACGAGGATTAG
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