mRNA_S-dermatodea_contig1345.2025.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig1345.2025.1
Unique NamemRNA_S-dermatodea_contig1345.2025.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig1345.2025.1 vs. uniprot
Match: A0A6H5KCK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCK6_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 7.190e-55
Identity = 115/154 (74.68%), Postives = 127/154 (82.47%), Query Frame = 2 
Query:  350 SSAAP--LFGDTIIVTKRCAERVLELRQAKSKPELRLRLTVEGGGCSGFQYKFALEDAAARGPKDDSEAEXXXXXXXXXADVD-----HEFIRNGAVLVVDDTSLGFVKGSTVDFEEDMMRSAFAVVNNPASESACGCGSSFAIKNFEKNPALD 790
            S+AAP  LFGDTIIVTKRCAER+ ELRQAK++P+L+LRL+VEGGGCSGFQYKF+LEDAA           XXXXXXXXX         HEF R+GAVLVVD TSL FVKG+TVDFEEDMMRSAFAV+NNP SESACGCGSSFA+KNFEKNPALD
Sbjct:   84 SAAAPTLLFGDTIIVTKRCAERLNELRQAKAQPDLKLRLSVEGGGCSGFQYKFSLEDAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEFERDGAVLVVDATSLEFVKGATVDFEEDMMRSAFAVLNNPVSESACGCGSSFALKNFEKNPALD 237
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BLAST of mRNA_S-dermatodea_contig1345.2025.1 vs. uniprot
Match: A0A4D9DG01_9STRA (Fe-S_biosyn domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DG01_9STRA)

HSP 1 Score: 146 bits (369), Expect = 3.890e-38
Identity = 78/139 (56.12%), Postives = 94/139 (67.63%), Query Frame = 2 
Query:  374 DTIIVTKRCAERVLELRQAKSKPELRLRLTVEGGGCSGFQYKFALEDAAARGPKDDSEAEXXXXXXXXXADVDHEFIRNGAVLVVDDTSLGFVKGSTVDFEEDMMRSAFAVVNNPASESACGCGSSFAIKNFEKNPALD 790
            + ++VT  C +R+  L+    K  L+LRL+VEGGGCSGF Y F +ED    GP +D                D  + R GA +VVD+ SL FV+GSTVDF EDMMRSAFAVV+NP SESACGCGSSFAIKNFEKNPA+D
Sbjct:    5 EDVVVTNACIKRIKALQVKTGKENLKLRLSVEGGGCSGFTYTFTMED----GPVEDD---------------DKVYGREGAQVVVDEGSLEFVRGSTVDFTEDMMRSAFAVVSNPLSESACGCGSSFAIKNFEKNPAID 124
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BLAST of mRNA_S-dermatodea_contig1345.2025.1 vs. uniprot
Match: W7UC88_9STRA (Iron-sulfur cluster assembly 2 mitochondrial-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UC88_9STRA)

HSP 1 Score: 145 bits (366), Expect = 8.360e-37
Identity = 77/139 (55.40%), Postives = 94/139 (67.63%), Query Frame = 2 
Query:  374 DTIIVTKRCAERVLELRQAKSKPELRLRLTVEGGGCSGFQYKFALEDAAARGPKDDSEAEXXXXXXXXXADVDHEFIRNGAVLVVDDTSLGFVKGSTVDFEEDMMRSAFAVVNNPASESACGCGSSFAIKNFEKNPALD 790
            + ++VT  C +R+  L+    K  L+LRL+VEGGGCSGF Y F +ED    GP +D                D  + R GA +VVD+ SL FV+GSTVDF EDMMRSAFAVV+NP SESACGCGSSFA+KNFEKNPA+D
Sbjct:   74 EDVVVTNACIKRIKALQVKTGKENLKLRLSVEGGGCSGFTYTFTMED----GPVEDD---------------DKVYGREGAQVVVDEGSLEFVRGSTVDFTEDMMRSAFAVVSNPLSESACGCGSSFAMKNFEKNPAID 193
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BLAST of mRNA_S-dermatodea_contig1345.2025.1 vs. uniprot
Match: A0A835ZPC5_9STRA (Fe-S_biosyn domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPC5_9STRA)

HSP 1 Score: 145 bits (367), Expect = 1.890e-36
Identity = 77/140 (55.00%), Postives = 98/140 (70.00%), Query Frame = 2 
Query:  374 DTIIVTKRCAERVLELRQAKS-KPELRLRLTVEGGGCSGFQYKFALEDAAARGPKDDSEAEXXXXXXXXXADVDHEFIRNGAVLVVDDTSLGFVKGSTVDFEEDMMRSAFAVVNNPASESACGCGSSFAIKNFEKNPALD 790
            D +IVTK CAER+ +LR+ +     LRLRL+VEGGGCSGFQY F ++D        D E +            D  F R+GA +V+D+ SLGFVKG+TVDF++DMMR+AF+V+NNP SE+ACGCGSSFA+K FE NPA D
Sbjct:  109 DAVIVTKSCAERINQLRKRRGGDAPLRLRLSVEGGGCSGFQYTFTMDDGTG-----DEEIDTP----------DIIFERDGAQVVIDEVSLGFVKGATVDFQQDMMRAAFSVLNNPNSENACGCGSSFAVKAFEANPARD 233
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BLAST of mRNA_S-dermatodea_contig1345.2025.1 vs. uniprot
Match: A0A7S2RUW2_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RUW2_9STRA)

HSP 1 Score: 142 bits (357), Expect = 5.620e-36
Identity = 79/153 (51.63%), Postives = 101/153 (66.01%), Query Frame = 2 
Query:  332 PPLRLFSSAAPLFGDTIIVTKRCAERVLELRQAKSKPELRLRLTVEGGGCSGFQYKFALEDAAARGPKDDSEAEXXXXXXXXXADVDHEFIRNGAVLVVDDTSLGFVKGSTVDFEEDMMRSAFAVVNNPASESACGCGSSFAIKNFEKNPALD 790
            P L  + S A L  + I+VTK CA R+LEL++  S   ++LRLTVEGGGCSGFQY+F ++      P D+ E              D  F R+GA +V+D+ SL FV G+TVDF E+M+RS+F VVNNP SESACGCGSSFA+K F  NPA+D
Sbjct:   27 PLLCRYLSTASL--EDIVVTKSCARRILELQKESSSEYVKLRLTVEGGGCSGFQYQFHMDSE----PVDEEE--------------DSVFERDGASVVIDEASLEFVTGATVDFVEEMIRSSFVVVNNPNSESACGCGSSFALKAFSDNPAVD 159
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BLAST of mRNA_S-dermatodea_contig1345.2025.1 vs. uniprot
Match: A0A7S3NJQ0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJQ0_9STRA)

HSP 1 Score: 134 bits (336), Expect = 3.340e-33
Identity = 72/139 (51.80%), Postives = 93/139 (66.91%), Query Frame = 2 
Query:  374 DTIIVTKRCAERVLELRQAKSKPELRLRLTVEGGGCSGFQYKFALEDAAARGPKDDSEAEXXXXXXXXXADVDHEFIRNGAVLVVDDTSLGFVKGSTVDFEEDMMRSAFAVVNNPASESACGCGSSFAIKNFEKNPALD 790
            D +IVT   A+R+  L+    +   RLRL V+GGGCSGFQY F  E A A+  +DDS                  F R+G  +VVD+TSL FV+G+TVD++E+M+RSAF V+NNP SESACGCGSSFA+KNF+ NPA+D
Sbjct:   26 DGLIVTAAAAKRIAVLKTNDGEAS-RLRLGVDGGGCSGFQYTFTTEAATAKLAEDDS-----------------VFSRDGHDVVVDETSLEFVRGATVDYQEEMIRSAFVVINNPNSESACGCGSSFALKNFDSNPAID 146
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BLAST of mRNA_S-dermatodea_contig1345.2025.1 vs. uniprot
Match: A0A7S2CX78_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CX78_9STRA)

HSP 1 Score: 132 bits (333), Expect = 1.370e-32
Identity = 72/139 (51.80%), Postives = 93/139 (66.91%), Query Frame = 2 
Query:  380 IIVTKRCAERVLELRQ--AKSKPELRLRLTVEGGGCSGFQYKFALEDAAARGPKDDSEAEXXXXXXXXXADVDHEFIRNGAVLVVDDTSLGFVKGSTVDFEEDMMRSAFAVVNNPASESACGCGSSFAIKNFEKNPALD 790
            +I+TK CA R+  L    A + P   LRL+VEGGGCSGFQY F L D +  GP+D +                  F R+G+ +V D++SL FV+GST+DF ++M+RS+FAVVNNP SESACGCGSSFA+K+F  NPALD
Sbjct:   42 LIITKSCARRIANLNAHAADTSPSKYLRLSVEGGGCSGFQYSFEL-DGSELGPEDLT------------------FERDGSRVVTDESSLEFVRGSTIDFTQEMIRSSFAVVNNPNSESACGCGSSFALKSFSDNPALD 161
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BLAST of mRNA_S-dermatodea_contig1345.2025.1 vs. uniprot
Match: D7G8E7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8E7_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 3.170e-32
Identity = 85/150 (56.67%), Postives = 94/150 (62.67%), Query Frame = 2 
Query:  350 SSAAP--LFGDTIIVTKRCAE-RVLELRQAKSKPELRLRLTVEGGGCSGFQYKFALEDAAARGPKDDSEAEXXXXXXXXXADVDHEFIRNGAVLVVDDTSLGFVKGSTVDFEEDMMRSAFAVVNNPASESACGCGSSFAIKNFEKNPALD 790
            S+AAP  LFGDTIIVTKRCAE +  +  Q  + PE        GGG  G   +  L     RG                      EF R+GAVLVVD TSL FVKG+TVDFEEDMMRSAFAV+NNP SESACGCGSSFA+KNFEKNPALD
Sbjct:   21 SAAAPTVLFGDTIIVTKRCAEVKRAQRGQDAAGPEA--PAFGGGGGVLGVSVQVLL---GRRGGGS-------------------EFERDGAVLVVDATSLEFVKGATVDFEEDMMRSAFAVLNNPVSESACGCGSSFALKNFEKNPALD 146
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BLAST of mRNA_S-dermatodea_contig1345.2025.1 vs. uniprot
Match: A0A7S1Z1W8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z1W8_TRICV)

HSP 1 Score: 128 bits (322), Expect = 3.570e-31
Identity = 74/144 (51.39%), Postives = 100/144 (69.44%), Query Frame = 2 
Query:  374 DTIIVTKRCAERVLELRQAKSKPE-LRLRLTVEGGGCSGFQYKFALEDAAARGPKDDSEAEXXXXXXXXXADVDHE----FIRNGAVLVVDDTSLGFVKGSTVDFEEDMMRSAFAVVNNPASESACGCGSSFAIKNFEKNPALD 790
            D ++VT  CA R+L+L   +   + + LR+ V+ GGCSGFQYKF LE  A           XXXXXXXX   +D +    F+++GA +V+D +SL  ++GSTVDF  +M+RS+FAV+ NP SESACGCGSSFA+KNFE+NPA+D
Sbjct:    9 DGVVVTASCAARILQLSSKRDDADSVYLRVYVDAGGCSGFQYKFELEGEAGESXXXXXXXXXXXXXXXXVVGIDPDEDVVFVKDGARVVIDRSSLELIRGSTVDFVREMIRSSFAVIGNPQSESACGCGSSFAVKNFEENPAVD 152
[Close]
BLAST of mRNA_S-dermatodea_contig1345.2025.1 vs. uniprot
Match: B8BT66_THAPS (Fe-S_biosyn domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BT66_THAPS)

HSP 1 Score: 127 bits (320), Expect = 1.180e-30
Identity = 68/140 (48.57%), Postives = 93/140 (66.43%), Query Frame = 2 
Query:  380 IIVTKRCAERVLELRQAKSKPE-LRLRLTVEGGGCSGFQYKFAL--EDAAARGPKDDSEAEXXXXXXXXXADVDHEFIRNGAVLVVDDTSLGFVKGSTVDFEEDMMRSAFAVVNNPASESACGCGSSFAIKNFEKNPALD 790
            + +T  CA R+ +L   +  P+ + LRL V+ GGCSGFQYKF L  ED       +D E +          D D  F+++G  +VVD TSL  ++GST+D+ ++M+RS+FAV++NP SESACGCGSSFA+KNFE NPALD
Sbjct:   37 LTITASCAARIKQLASTRPNPDSIYLRLYVDAGGCSGFQYKFLLLSEDNDMNNSLEDDEEDGAIDP-----DEDIIFVKDGMRVVVDQTSLELLRGSTIDYVQEMIRSSFAVMSNPQSESACGCGSSFAVKNFETNPALD 171
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1345.2025.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCK6_9PHAE7.190e-5574.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9DG01_9STRA3.890e-3856.12Fe-S_biosyn domain-containing protein n=1 Tax=Nann... [more]
W7UC88_9STRA8.360e-3755.40Iron-sulfur cluster assembly 2 mitochondrial-like ... [more]
A0A835ZPC5_9STRA1.890e-3655.00Fe-S_biosyn domain-containing protein n=1 Tax=Trib... [more]
A0A7S2RUW2_9STRA5.620e-3651.63Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S3NJQ0_9STRA3.340e-3351.80Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2CX78_9STRA1.370e-3251.80Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
D7G8E7_ECTSI3.170e-3256.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1Z1W8_TRICV3.570e-3151.39Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
B8BT66_THAPS1.180e-3048.57Fe-S_biosyn domain-containing protein n=1 Tax=Thal... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1345contigS-dermatodea_contig1345:10580..16061 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score134.0
Seed ortholog evalue9e-29
Seed eggNOG ortholog2880.D7G8E7
Preferred nameISA2
KEGG koko:K15199,ko:K22063,ko:K22072
GOsGO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0010467,GO:0016043,GO:0016053,GO:0016226,GO:0017144,GO:0018130,GO:0019538,GO:0019752,GO:0022607,GO:0031163,GO:0031974,GO:0032787,GO:0034641,GO:0042364,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044572,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0070013,GO:0071704,GO:0071840,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.protein maturation by iron-sulfur cluster transfer
EggNOG OGsCOG0316@1,KOG1119@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03021,ko03029
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionFeS cluster biogenesis
Ec32 orthologEc-14_002770.1
Exons4
Model size1801
Cds size714
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1345.2025.1prot_S-dermatodea_contig1345.2025.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig1345 10659..15053 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924286.3876553-UTR-S-dermatodea_contig1345:10579..106581622924286.3876553-UTR-S-dermatodea_contig1345:10579..10658Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1345 10580..10658 +
1694079151.661219-UTR-S-dermatodea_contig1345:10579..106581694079151.661219-UTR-S-dermatodea_contig1345:10579..10658Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1345 10580..10658 +
1622924286.4456053-UTR-S-dermatodea_contig1345:15053..160611622924286.4456053-UTR-S-dermatodea_contig1345:15053..16061Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1345 15054..16061 +
1694079151.7220674-UTR-S-dermatodea_contig1345:15053..160611694079151.7220674-UTR-S-dermatodea_contig1345:15053..16061Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1345 15054..16061 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924286.4029286-CDS-S-dermatodea_contig1345:10658..109851622924286.4029286-CDS-S-dermatodea_contig1345:10658..10985Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1345 10659..10985 +
1694079151.673678-CDS-S-dermatodea_contig1345:10658..109851694079151.673678-CDS-S-dermatodea_contig1345:10658..10985Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1345 10659..10985 +
1622924286.4140446-CDS-S-dermatodea_contig1345:11953..121411622924286.4140446-CDS-S-dermatodea_contig1345:11953..12141Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1345 11954..12141 +
1694079151.6836045-CDS-S-dermatodea_contig1345:11953..121411694079151.6836045-CDS-S-dermatodea_contig1345:11953..12141Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1345 11954..12141 +
1622924286.4260213-CDS-S-dermatodea_contig1345:13096..131661622924286.4260213-CDS-S-dermatodea_contig1345:13096..13166Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1345 13097..13166 +
1694079151.694394-CDS-S-dermatodea_contig1345:13096..131661694079151.694394-CDS-S-dermatodea_contig1345:13096..13166Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1345 13097..13166 +
1622924286.4345667-CDS-S-dermatodea_contig1345:14924..150531622924286.4345667-CDS-S-dermatodea_contig1345:14924..15053Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1345 14925..15053 +
1694079151.7099829-CDS-S-dermatodea_contig1345:14924..150531694079151.7099829-CDS-S-dermatodea_contig1345:14924..15053Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1345 14925..15053 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig1345.2025.1

>prot_S-dermatodea_contig1345.2025.1 ID=prot_S-dermatodea_contig1345.2025.1|Name=mRNA_S-dermatodea_contig1345.2025.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=238bp
MAVTLRSLRSTSVSSFLAANRLRPKYDSRTAQRLGSTCVLCSSQQRLAFS
SGAIVGPATGVPAVARRGVPRAASGWEILATSWKPPLRLFSSAAPLFGDT
IIVTKRCAERVLELRQAKSKPELRLRLTVEGGGCSGFQYKFALEDAAARG
PKDDSEAEDDDSDDEDEADVDHEFIRNGAVLVVDDTSLGFVKGSTVDFEE
DMMRSAFAVVNNPASESACGCGSSFAIKNFEKNPALD*
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mRNA from alignment at S-dermatodea_contig1345:10580..16061+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig1345.2025.1 ID=mRNA_S-dermatodea_contig1345.2025.1|Name=mRNA_S-dermatodea_contig1345.2025.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5482bp|location=Sequence derived from alignment at S-dermatodea_contig1345:10580..16061+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CTTACGCGTACCACCGGGAGGCTCTCTCTTGGTAGCATTGGTAGCACAGC
TATTTGCCTCGTCCGCCGCCGCAACGTCCATGGCGGTAACGCTCCGCTCG
TTGCGCTCTACGTCGGTGTCCTCATTCTTAGCCGCCAATCGACTCAGACC
GAAATACGATTCAAGAACAGCACAACGACTAGGGTCAACCTGCGTTTTGT
GCTCTAGCCAGCAGCGACTCGCCTTCTCAAGCGGGGCGATTGTTGGCCCG
GCCACTGGGGTGCCGGCAGTAGCGAGGAGGGGGGTTCCAAGAGCAGCCAG
CGGCTGGGAGATCTTGGCGACGAGTTGGAAGCCACCGCTGCGGTTATTTT
CGTCGGCGGCGCCCTTATTCGGCGACACCATCATCGTTACCAAGCGCTGC
GCTGAGGTGAAGCGAAATGCTGGTTCCTCGTTGTAGCAGTAGAGTTCTAT
TTATAGCGTTCAGTTTTGCCAGTCCCGCTTCCCCCCGCGGCGTTCCTCCC
TTCGAAGGTGATCGTGGCTTCTGTCTGTAGCAGGTTGCTGCCGCTGCTGC
TCTAGTGCAACATAGTGAGCTTTACAATGATCGTGGGGTGTACCATACGG
CAGTAGCGCTACAGCATTACTACTGCTGTATACATACAGCAGTTGTATAA
TATCATAGTGTATGTTCATACTTCGAAGTATGTTCATACGTATTATAACG
GGGTGCACCAGTATCGCTCGTCTGTCGTCGTATCGTGGCGCGCGTAGTCA
GCTGTCATGGCATTTCCACCATCGCTCATTGAAGAGCACGCGCAGATACG
ATACTTGTATGTCGTCGCTCGTGCTTCGACCGTTAGTGTTGTAGGTGACC
ACCTTCAGGACGGTGTTCGCCGACCTTGAAGTTCACCGATGGACGTATGA
TACTTGTATCTACTGCTGTAATACTACTGTTGAATTTATTCTGGGTTGCC
ACAGAGGAAGCACCACGACCAGCGTTCTGTACCCGTCTCCACCACGACAG
CCCGAACAGAGTACGATTGACTCTTTTATGTGCCATACATACAGTTCGAC
GAGGCGACCGTACGTGTCTCACTTGCAGGCCCAAATTAAGCACGCACTCA
ATTAAAATTAAAGGCACGCACTGTTATGTTAATACTATTGTGTTAATACT
GGTGTTGTAGAGCTCGATGTACATTGAATCCTCACCTGTTGAGTCTCGAC
CCTGAAACCCGTTTATCACTGTAGGCCCTGGACGCCATCATTATGAGAAG
CAGCGAGCGGCACCCTCATCTTGTGTTGTCTCCTCCGGCTCCCCTCTTTC
GTCTGTCTCGCTACCTTTCTCTTTCCCTCTACAACGTATTGCGTGGGCCC
ACCTGCTCTTTAAAACTATAAAAGAGAGTACTCGAGCTGCGACAAGCGAA
ATCCAAACCGGAGCTTAGGCTCCGCCTTACCGTTGAGGGCGGAGGCTGCT
CAGGGTTTCAGTACAAGTTTGCCTTGGAAGACGCGGCGGCGAGGGGCCCA
AAAGACGACAGCGAGGCGGAGGACGACGACAGCGACGACGAGGATGAGGC
GGACGTTGATCAGTGAGATTATTGTCTTACCATCACAAGTATTCCCGTTT
CAGCCTATTTGCGCATATTTCGGTAGGGAGCGGGCGGCGCGTGAGCGTGC
TGACGCCATCGATCAAGATATGTCGTACCTTGTACCGGTATTGTCCAAGC
CCAGACGTTGGGAGTCTTGTTGATCGCTTACCACGTGCCGCTCGTGCTTT
ACCTCTCCATGGCGCTGGCTCGATGGTTCAGCGTTTTTACGGGTGCGCAT
GACTTCTAGGGTAGCCTTTTGGTATGACAAGAACATTGTGCTCTGTAACC
ATTGTACCATGCCTATTATAGAAAAAAAATGGGACTCCGGGGTGGGTGCC
CAGTTACCGCCAGTCAGGGATACATACCAACTTTCACTTTGACCCTCTTG
CTCGCAATTCGCGAGCTGGGTGTGAACTGGCGAGACCCATCGCTCTTTTC
GAGCTTGTAAGTCCTCGTTTTAATGGACTCCCCCCGCCCCGCAAAAAAAA
AAAAAAACAGAAAACATAGAGCGAGCGTTGGGGTCCCACCTTTTCAAGAG
GGAAGATGGTCCAAGCTACACCTAGCCCACTTGTTATATATGCTATGGTG
TCGTATCATGTATGATGCTGTATGGTTATGGTACAAGATTATTTATGCTG
AGCGATATCCTGGTGATGTATCTTTGATTTGCTTTTATGAGCCAAGAAGA
TTAAATTTTCCTTTTTATTTACCACCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCTCCCCTCCCCCCCCCCCCCCCCCCCCCTCCCCCCTTA
TCTCTGTGGNNNNNNNNNNTAAAATATTATTTTTCCTGTGTGTTTTCTGG
GTGTTGTTTTTTTTTTTTTTTTTTTTGAGAAAAAAAAATTAATTTTTTTT
TTTTTTTTCCCCCCCCCCCCCCCCCCCCCCCGCTCGTCTTTCCCGGCATC
TCGCGCCCCGCTTGCAGCGAGTTCATTCGGAATGGAGCTGTGTTGGTGGT
GGATGATACATCGCTAGGTTTTGTGAAAGGCTCAACGGTGAGTTCAGCGC
GCCGTATTTCACCCCCCCCTTTGAAATAGAACCCCGTCTCAGTATTATTG
CGTCGGGCACGGAGCGTTCTCGTTCAGAGCGTGATCTGGTGTAGCCGGCA
CTTCCGATGTTTTGAGCTCCAAACGGTGCATTGACCGGTGGAACGCTTCC
GTTAGCAACATCGGAACGCGCTGCCTTCCAACTTGTTGCGACTTCGGCAT
CCTGCTTGTCGTGGACGCGTGACCTCGCACCCGCCGCACAACAAATGCCA
CGCTTCTCCAGTTTGTACGATGGATTTTCTTGGAAGGTATCGTCATCCGC
AGGTAGTAGCCCCTGAACCCCGCGCTTGCGAATAGCATTCGTGATAACGT
GGGGGATTACCTGCAAGTCATACGTGGTGGTGGGAGTCGCGTGCATGTGT
TTGGCTTAAAAAAGTGGCGATACTTCACCATAGCTCGATACCCCCCCCCC
CCGCTCCGTCCTCTCGAGGACGCGTGGTCAATGGTCTAACAGCTAAGGCA
TGCAAAACATGAGNNNNNNNNNNTATTCCCCCCCGAACTTCACCCCCCCC
CCCCCCCCCCCCTCCCCCCAAGGTCGGTTGGTCATTGTTTCTAAAGCTAA
GCCATCCAAAAAATCAGCTTCCCCCCCCCCCCCCCCCCCCGCGCCCTGAT
TTGCTTTGTCTTGCTCACATCTGTGTTGAAAATGTCGATTGTGACGCGAT
AAAGGAATTATTACCGCGATGCAGGCAAAAAGTACTGGCGGTGTTCTACC
AGGGGACGATTAAGCCGTCCTTGCCTCGGATCCGTGCCCCATTTCGCACG
TATCTCTTCTCGGAACTGTACCGGGACCGAATCTGTAGGTATCCCGCCAG
AGCTGAGGACATTGCGGAGATCGCTCTGTCCTTTCTACGCTTCCGTGGAT
CGAAACAACAGAACAATCGCCGCGGGCATGCCATGCCATCGCACGTGGAT
GCGTTTGTTCGAAAAGTTCACCCGCAGACTCGGCCCCACATATGCGTGAC
ACTTCATGAGGTCGTCACAATTATGACTCTAGAGCGAGGATCGTGACTAC
GAAGGGTGACAGAAGAGACTCCGCACCCATAATTTTTCTTGTCGTCGGTG
TTTGTCGCACAAGCCTGGGACCCTGCCCCCGGACTCACACGCTGTAGCTC
GAAAGATCCCGGGGTAGACCAGACCCCTTCTGTGAAATTGGTTTGGCCAA
CCTAGGGTGTGCGACTAAGATCTACATGTTCAGGCGAGGTCTGCACACAC
CTGTTGTGGCTCGACCACTCTGCGTGGGCGCTCTTGGATGCCTGTCCGGG
AAAGGATATTCGCGTGTTGCCAGCACATGACTCATTTTGGAGAAAATCGG
CCGTTACAACTGCAACTCTCTCGACGCCTCTTTGATTTATTTCATTTTCC
GACGTGTTGTTTTCTCTTCTCTGAGACGATGAATTTTCCATTTTGACCCC
ATGGAACTTTTTCATTTGTGAACCGATCTTGGACGATAACCGAGTTTGGA
CGACAATGGTCTCGCTGAATTTCCAAAGGTCTTAATGACTGGTATGACCC
TCGCACATTTTCTGATGGTCGGTGAGCGTCGCACTCGGCAGGCTAAACTG
ACCTACCTCCCCACGGGAACATGTGGTTTTCCGGCCGCACGTTTTGTTGT
TTGCTGGCGGTAATTTACACGTCCTATCCGTTTTTTCAACAGAGGTGCTC
ACCATCTCCGCGTCTCTCTGTATTTCCGTCGCTTCGGCGCGTCAGGTGGA
CTTCGAGGAAGACATGATGCGAAGCGCGTTTGCCGTGGTAAACAACCCGG
CGTCCGAGAGCGCCTGCGGGTGCGGCAGCTCGTTCGCCATCAAGAACTTC
GAGAAGAACCCCGCCCTCGACTAGTGCAGACGAGCAAGGTCTCGGAACAG
AGGCATCATAGTACACAAAAGTGGCACGATAACGCGTGCCCGGTGTACGA
GTGAAGCCCGTGCGGTGGCGGACCGGCATCGCTCCTGGGCGAGTAAGGAG
GACGGCTGCTGATTCTGGTGCAAGTTTACGAATCCGTAAGGCCAGCGCCG
TGAGATAGAGGCGGCTACGCCGTGTGCAAACCCCAACATTTTTTTGTCCT
TTGTCTCTTCGTTCTGGCGTCCGCGAACGGTGTTTGCGTGAGAGGTTTGT
GGCGTGTGGCGGCAACGGTGCGCGTTTTTGTAGATGCGGTCGACACGATA
GTTGACGGCCTTTGCCGCAGCTCTTGTTGCATGTTGCCGTTCGATGTTGT
CGTGATGCCGTGGGCCGATGTAGTGTGCATACGTCAATGAGGCCCACGAG
TAGATGTACCGTGGTCACGAGTCAGTGATGCCCCGTGAGTTTCCGCTTGG
AGTCTTGTCTTGAAGCGGCGTGTGCCACCACATTTGTTTGCTTCAGCCTT
AATTGTCACCCAAGGGTAGATCCATGCTGTGGCCACGGGTGTATAAGTAT
CCGCGTATCAAGAGTACAAACCCTGCCCAGAACGAAGTTGTGTTGAATAG
TATGAACCTATTGACAGGGATACAGGGCCATCTCATGCTACCCCTACTTG
CTAATTTGCAGTGAAGTCGAACACAATACATGCGTGCTTCCAATCAGACA
CAAAGCCTCTCTTCTTGTGGGTTCAGCGCAGATGAAGTAGACCTAAAAAC
GCATCCATCTGAGTGTCACGACGGTATGACACGACCCTGGGGATACTCGA
CTCTATCCACGAGCGAATCTAATATTTCGGGAGTCCTCGACGTTACTCAG
ACGCATCGGCTTGGCCCTCACGTTGTAGCTCGCAACGCTTGGCGTGCGAA
ACCTTTTCCGGTGCAGCGGCCCACCGCGACGACCCAGCGGCGCCTTTTTT
TTTTCTTCTCCCCGTGGCCTGCGTCTTGCCTT
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Coding sequence (CDS) from alignment at S-dermatodea_contig1345:10580..16061+

>mRNA_S-dermatodea_contig1345.2025.1 ID=mRNA_S-dermatodea_contig1345.2025.1|Name=mRNA_S-dermatodea_contig1345.2025.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1428bp|location=Sequence derived from alignment at S-dermatodea_contig1345:10580..16061+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCGGTAACGCTCCGCTCGTTGCGCTCTACGTCGGTGTCCTCATTCTT
AGCCGCCAATCGACTCAGACCGAAATACGATTCAAGAACAGCACAACGAC
TAGGGTCAACCTGCGTTTTGTGCTCTAGCCAGCAGCGACTCGCCTTCTCA
AGCGGGGCGATTGTTGGCCCGGCCACTGGGGTGCCGGCAGTAGCGAGGAG
GGGGGTTCCAAGAGCAGCCAGCGGCTGGGAGATCTTGGCGACGAGTTGGA
AGCCACCGCTGCGGTTATTTTCGTCGGCGGCGCCCTTATTCGGCGACACC
ATCATCGTTACCAAGCGCTGCGCTGAGATGGCGGTAACGCTCCGCTCGTT
GCGCTCTACGTCGGTGTCCTCATTCTTAGCCGCCAATCGACTCAGACCGA
AATACGATTCAAGAACAGCACAACGACTAGGGTCAACCTGCGTTTTGTGC
TCTAGCCAGCAGCGACTCGCCTTCTCAAGCGGGGCGATTGTTGGCCCGGC
CACTGGGGTGCCGGCAGTAGCGAGGAGGGGGGTTCCAAGAGCAGCCAGCG
GCTGGGAGATCTTGGCGACGAGTTGGAAGCCACCGCTGCGGTTATTTTCG
TCGGCGGCGCCCTTATTCGGCGACACCATCATCGTTACCAAGCGCTGCGC
TGAGAGAGTACTCGAGCTGCGACAAGCGAAATCCAAACCGGAGCTTAGGC
TCCGCCTTACCGTTGAGGGCGGAGGCTGCTCAGGGTTTCAGTACAAGTTT
GCCTTGGAAGACGCGGCGGCGAGGGGCCCAAAAGACGACAGCGAGGCGGA
GGACGACGACAGCGACGACGAGGATGAGGCGGACGTTGATCAAGAGTACT
CGAGCTGCGACAAGCGAAATCCAAACCGGAGCTTAGGCTCCGCCTTACCG
TTGAGGGCGGAGGCTGCTCAGGGTTTCAGTACAAGTTTGCCTTGGAAGAC
GCGGCGGCGAGGGGCCCAAAAGACGACAGCGAGGCGGAGGACGACGACAG
CGACGACGAGGATGAGGCGGACGTTGATCACGAGTTCATTCGGAATGGAG
CTGTGTTGGTGGTGGATGATACATCGCTAGGTTTTGTGAAAGGCTCAACG
CGAGTTCATTCGGAATGGAGCTGTGTTGGTGGTGGATGATACATCGCTAG
GTTTTGTGAAAGGCTCAACGGTGGACTTCGAGGAAGACATGATGCGAAGC
GCGTTTGCCGTGGTAAACAACCCGGCGTCCGAGAGCGCCTGCGGGTGCGG
CAGCTCGTTCGCCATCAAGAACTTCGAGAAGAACCCCGCCCTCGACTAGG
TGGACTTCGAGGAAGACATGATGCGAAGCGCGTTTGCCGTGGTAAACAAC
CCGGCGTCCGAGAGCGCCTGCGGGTGCGGCAGCTCGTTCGCCATCAAGAA
CTTCGAGAAGAACCCCGCCCTCGACTAG
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