mRNA_S-dermatodea_contig1344.2017.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig1344.2017.1
Unique NamemRNA_S-dermatodea_contig1344.2017.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig1344.2017.1 vs. uniprot
Match: D7G749_ECTSI (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G749_ECTSI)

HSP 1 Score: 422 bits (1084), Expect = 2.030e-143
Identity = 196/211 (92.89%), Postives = 207/211 (98.10%), Query Frame = 1
Query:  343 MAHQEYGKGSYWDDRYTKDPEIFDWYQRYSGLKDMVSQHVRKDDNILMVGCGNSRLSEDMFDDGYATITNIDVSRVVIDQMIARYRDKPALMWQMLNVCALDYPDESFNAVIDKGTLDSVLCGEGSTANVAKMCMEISRVLKPNGVYFICSYGVPDNRLQYLENDDYSWTVTVNTIPKPTISAAAVPDTRDAESVHYLYICKKGGTAEEGA 975
            M+HQ+YGK SYWDDRYTKDPEIFDWYQRYSGLKD +SQ+VRKDDNILMVGCGNSRLSEDMFDDG+ T+TNIDVSRVV++QMIARYRDKPALMW M+NVCALDYPDESFNAVIDKGTLDSVLCGEGSTANVAKMCMEISRVLKPNGVYFICSYGVPDNRLQYLENDDYSWTVTV+TIPKPTISAAAVPDTRDAESVHYLY+CKKGGTAEEGA
Sbjct:    1 MSHQQYGKASYWDDRYTKDPEIFDWYQRYSGLKDWISQYVRKDDNILMVGCGNSRLSEDMFDDGFTTLTNIDVSRVVVEQMIARYRDKPALMWSMMNVCALDYPDESFNAVIDKGTLDSVLCGEGSTANVAKMCMEISRVLKPNGVYFICSYGVPDNRLQYLENDDYSWTVTVHTIPKPTISAAAVPDTRDAESVHYLYVCKKGGTAEEGA 211          
BLAST of mRNA_S-dermatodea_contig1344.2017.1 vs. uniprot
Match: A0A7S2V7W5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7W5_9STRA)

HSP 1 Score: 351 bits (900), Expect = 1.130e-115
Identity = 157/206 (76.21%), Postives = 188/206 (91.26%), Query Frame = 1
Query:  355 EYGKGSYWDDRYTKDPEIFDWYQRYSGLKDMVSQHVRKDDNILMVGCGNSRLSEDMFDDGYATITNIDVSRVVIDQMIARYRDKPALMWQMLNVCALDYPDESFNAVIDKGTLDSVLCGEGSTANVAKMCMEISRVLKPNGVYFICSYGVPDNRLQYLENDDYSWTVTVNTIPKPTISAAAVPDTRDAESVHYLYICKKGGTAEEG 972
            +YGK SYWD+RYTKDPE FDWYQRYSG+KD+++Q++ K+DNILM G GNSRLSE+MFDDGY TITNID+SRVVI+QMI R RDK AL WQ +NV +L++PDESF+AVIDKGT+DS+LCGEGSTAN AKMC+E+SRVLKPNGV+FI SYGVP+NRLQYLENDDYSW V+ +TIPKPT++AAAVPDT+DA SVHY+Y+C+KGGT EEG
Sbjct:    3 QYGKTSYWDERYTKDPEPFDWYQRYSGVKDLIAQYIHKEDNILMAGAGNSRLSEEMFDDGYTTITNIDISRVVIEQMIERCRDKAALTWQQMNVASLEFPDESFDAVIDKGTMDSILCGEGSTANCAKMCLEVSRVLKPNGVFFIVSYGVPENRLQYLENDDYSWQVSEHTIPKPTVTAAAVPDTKDANSVHYVYVCQKGGTGEEG 208          
BLAST of mRNA_S-dermatodea_contig1344.2017.1 vs. uniprot
Match: A0A6U1K5P8_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6U1K5P8_9STRA)

HSP 1 Score: 343 bits (879), Expect = 1.650e-112
Identity = 149/206 (72.33%), Postives = 188/206 (91.26%), Query Frame = 1
Query:  355 EYGKGSYWDDRYTKDPEIFDWYQRYSGLKDMVSQHVRKDDNILMVGCGNSRLSEDMFDDGYATITNIDVSRVVIDQMIARYRDKPALMWQMLNVCALDYPDESFNAVIDKGTLDSVLCGEGSTANVAKMCMEISRVLKPNGVYFICSYGVPDNRLQYLENDDYSWTVTVNTIPKPTISAAAVPDTRDAESVHYLYICKKGGTAEEG 972
            +YGK SYWD+RYTKDPE FDWYQRYSG+++++ ++V+KDD +LM GCGNSRLSEDMF+DG+A I+N+D+SRVVIDQM  +Y+DKPAL +Q +NVC+L++PDESF+AVI KGT+D++LCGEGSTANVAKMCME+SRVLKP+G+ F+ SYGVPDNR+QYLEN+DYSWTVT +T+PKPT+SA AVPDT+DA SVHY+Y+C KGG AEEG
Sbjct:    3 QYGKTSYWDERYTKDPEPFDWYQRYSGIQELLQKYVKKDDAVLMAGCGNSRLSEDMFEDGFANISNVDISRVVIDQMGDKYKDKPALTFQQMNVCSLEFPDESFDAVIVKGTMDAILCGEGSTANVAKMCMEVSRVLKPSGILFVVSYGVPDNRMQYLENEDYSWTVTTHTVPKPTVSATAVPDTKDANSVHYIYVCAKGGNAEEG 208          
BLAST of mRNA_S-dermatodea_contig1344.2017.1 vs. uniprot
Match: A0A7S2GCN9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GCN9_9STRA)

HSP 1 Score: 343 bits (879), Expect = 1.650e-112
Identity = 152/206 (73.79%), Postives = 188/206 (91.26%), Query Frame = 1
Query:  355 EYGKGSYWDDRYTKDPEIFDWYQRYSGLKDMVSQHVRKDDNILMVGCGNSRLSEDMFDDGYATITNIDVSRVVIDQMIARYRDKPALMWQMLNVCALDYPDESFNAVIDKGTLDSVLCGEGSTANVAKMCMEISRVLKPNGVYFICSYGVPDNRLQYLENDDYSWTVTVNTIPKPTISAAAVPDTRDAESVHYLYICKKGGTAEEG 972
            +YGK SYWD+RYTKDPE FDWYQRYSGL ++++++V+KDD ILM G GNSRLSEDM++DGY TITNID+SRVV+DQMI RY+DK AL +Q +NVC+L++PDESF+AV  KGT+D++LCGEGSTANVAKMC E+SRVLK +GV+FI SYGVPDNRLQYLEN+DYSWTV+V+T+PKPT+SA AVPDT+DA SVHY+Y+C+KGGTA+EG
Sbjct:    3 QYGKTSYWDERYTKDPEPFDWYQRYSGLSELLNKYVKKDDTILMAGAGNSRLSEDMYEDGYQTITNIDISRVVVDQMIDRYKDKAALTYQQMNVCSLEFPDESFDAVTAKGTMDAILCGEGSTANVAKMCQEVSRVLKAHGVFFIVSYGVPDNRLQYLENEDYSWTVSVHTVPKPTVSATAVPDTKDANSVHYIYVCQKGGTADEG 208          
BLAST of mRNA_S-dermatodea_contig1344.2017.1 vs. uniprot
Match: A0A835ZP38_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZP38_9STRA)

HSP 1 Score: 341 bits (874), Expect = 5.010e-111
Identity = 149/204 (73.04%), Postives = 186/204 (91.18%), Query Frame = 1
Query:  361 GKGSYWDDRYTKDPEIFDWYQRYSGLKDMVSQHVRKDDNILMVGCGNSRLSEDMFDDGYATITNIDVSRVVIDQMIARYRDKPALMWQMLNVCALDYPDESFNAVIDKGTLDSVLCGEGSTANVAKMCMEISRVLKPNGVYFICSYGVPDNRLQYLENDDYSWTVTVNTIPKPTISAAAVPDTRDAESVHYLYICKKGGTAEEG 972
            GK SYWDDRYTKDPE FDWYQRYSG+KD+V+  ++ +DN+LM+GCGNSRLSEDM +DG+ +ITNID+SRVVIDQMI R++DKPAL+WQ +N  AL+YPDESF+A +DKGTLDS++CGEG++ANVAKMCME+SRVLKPNGVY + SYG PD+RL+YL++DDYSWTV+V T+PKP ISAAA+PDT+DA +VHY+Y+C+KGGTAEEG
Sbjct:   52 GKVSYWDDRYTKDPEPFDWYQRYSGIKDLVAAQMKHEDNVLMLGCGNSRLSEDMLEDGFTSITNIDISRVVIDQMIERHKDKPALVWQRMNAMALEYPDESFDAAVDKGTLDSLMCGEGASANVAKMCMEVSRVLKPNGVYLVISYGAPDSRLKYLQSDDYSWTVSVATLPKPAISAAAIPDTKDASAVHYVYLCRKGGTAEEG 255          
BLAST of mRNA_S-dermatodea_contig1344.2017.1 vs. uniprot
Match: A0A7S3M8V2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8V2_9STRA)

HSP 1 Score: 330 bits (846), Expect = 1.590e-107
Identity = 151/207 (72.95%), Postives = 178/207 (85.99%), Query Frame = 1
Query:  355 EYGKGSYWDDRYTKDPEIFDWYQRYSGLKDMVSQHVRKDDNILMVGCGNSRLSEDMFDDGYATITNIDVSRVVIDQMIARYRDKPALMWQMLNVCALDYPDESFNAVIDKGTLDSVLCGEGSTANVAKMCMEISRVLKPNGVYFICSYGVPDNRLQYLENDD-YSWTVTVNTIPKPTISAAAVPDTRDAESVHYLYICKKGGTAEEG 972
            +YGK SYWD+RYTKDPE FDWYQRYSG++D ++Q+V+++D ILM G GNSRL+EDMF+DGY+TITNIDVSRVVIDQ I RY+DKP L WQ +NV ALD+PDE+F+ VI K TLD+VLCGEGSTANVAK C E+SRVLKP GV+FI SYGVPDNRL YLE +D YSW V+V+T+PKPT+SAAAVP   DA  VHY+YIC KGGTAEEG
Sbjct:    3 QYGKTSYWDERYTKDPEPFDWYQRYSGIRDFINQYVKREDVILMAGAGNSRLTEDMFEDGYSTITNIDVSRVVIDQQIERYKDKPTLQWQQMNVTALDFPDETFDVVIAKATLDAVLCGEGSTANVAKFCSEVSRVLKPTGVFFIVSYGVPDNRLNYLEKEDLYSWNVSVHTVPKPTVSAAAVPSAEDANGVHYIYICSKGGTAEEG 209          
BLAST of mRNA_S-dermatodea_contig1344.2017.1 vs. uniprot
Match: A0A7S2AN98_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AN98_9STRA)

HSP 1 Score: 330 bits (845), Expect = 2.170e-107
Identity = 145/206 (70.39%), Postives = 181/206 (87.86%), Query Frame = 1
Query:  355 EYGKGSYWDDRYTKDPEIFDWYQRYSGLKDMVSQHVRKDDNILMVGCGNSRLSEDMFDDGYATITNIDVSRVVIDQMIARYRDKPALMWQMLNVCALDYPDESFNAVIDKGTLDSVLCGEGSTANVAKMCMEISRVLKPNGVYFICSYGVPDNRLQYLENDDYSWTVTVNTIPKPTISAAAVPDTRDAESVHYLYICKKGGTAEEG 972
            +YGK SYWD+RYTKDPE FDWYQRYSG+ + + ++++KDD ILM G GNSRLSEDM++DGY TITNID+SRVV+DQM+ +YRDK  L +Q +NVC+L++PDESF+AV+ KGT+D++LCGEGSTANVAKMC E+SRVLK +GV+ I SYGVPDNRLQYL+N+DYSW VT  T+ KPT+SA AVPDT+DA SVHY+YIC+KGGTA+EG
Sbjct:    3 QYGKTSYWDERYTKDPEPFDWYQRYSGMAETIQKYIKKDDQILMAGAGNSRLSEDMYEDGYNTITNIDISRVVVDQMVDKYRDKTPLPYQQMNVCSLEFPDESFDAVVAKGTMDAILCGEGSTANVAKMCQEVSRVLKVHGVFIIVSYGVPDNRLQYLDNEDYSWMVTTQTVAKPTVSATAVPDTKDANSVHYIYICQKGGTADEG 208          
BLAST of mRNA_S-dermatodea_contig1344.2017.1 vs. uniprot
Match: A0A7R9UCD5_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCD5_9STRA)

HSP 1 Score: 316 bits (810), Expect = 7.550e-101
Identity = 142/209 (67.94%), Postives = 175/209 (83.73%), Query Frame = 1
Query:  343 MAHQEYGKGSYWDDRYTKDPEIFDWYQRYSGLKDMVSQHVRKDDNILMVGCGNSRLSEDMFDDGYATITNIDVSRVVIDQMIARYRDKPALMWQMLNVCALDYPDESFNAVIDKGTLDSVLCGEGSTANVAKMCMEISRVLKPNGVYFICSYGVPDNRLQYLENDDYSWTVTVNTIPKPTISAAAVPDTRDAESVHYLYICKKGGTAEE 969
            MA  +YGK  YWD+RYTKDPE FDWYQRYSGLKD + Q ++K+D+ILM  CG+SRL+EDM++DG+  I NID S+VVI+QM  R  DKPAL WQ++NV AL++PDESF+AVI K T+D++LCGEGSTANVAKMC E+SRVLKP+GV+FI SYGVPDNRL YLE +DY W VTV+TI KPT+SA AVPDT+DA SVHY+Y+C+K G  E+
Sbjct:   82 MAAAQYGKLQYWDERYTKDPESFDWYQRYSGLKDTMDQFMKKEDSILMASCGSSRLTEDMYEDGFTNIVNIDASKVVIEQMTQRCEDKPALTWQVMNVMALEFPDESFDAVIAKATMDAILCGEGSTANVAKMCTEVSRVLKPSGVFFIVSYGVPDNRLNYLEQEDYGWQVTVHTIAKPTVSATAVPDTKDANSVHYIYVCEKNGPRED 290          
BLAST of mRNA_S-dermatodea_contig1344.2017.1 vs. uniprot
Match: A0A7S3K5J8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K5J8_9STRA)

HSP 1 Score: 308 bits (788), Expect = 9.140e-99
Identity = 139/210 (66.19%), Postives = 176/210 (83.81%), Query Frame = 1
Query:  355 EYGKGSYWDDRYTKDPEIFDWYQRYSGLKDMVSQHVRKDDNILMVGCGNSRLSEDMFDDGYATITNIDVSRVVIDQMIARYRDKP-ALMWQMLNVCALDYPDESFNAVIDKGTLDSVLCGEGSTANVAKMCMEISRVLKPNGVYFICSYGVPDNRLQYLENDDYSWTVTVNTIPKPTISAAA--VPDTRDAESVHYLYICKKGGTAEEGA 975
            +YGK SYWDDRY KDPE FDWYQRYSGL +++S+++++DD ILM GCGNSR++EDM +DGY +ITNIDVSRVVIDQM  +Y+DK    ++Q++NVC L++PDESF+A+I KG +D++LCGEGSTANVAKMCME SRVLKPNGV FI SYG PDNRLQYL+N+DYSW V+ +T+PKPT+SAA+    DT DA SVHY+Y+C+KG    + A
Sbjct:    3 QYGKASYWDDRYNKDPEAFDWYQRYSGLSEIMSKYIKRDDAILMAGCGNSRMTEDMIEDGYTSITNIDVSRVVIDQMKEKYKDKKDTFIYQIMNVCGLEFPDESFDAIIAKGVMDAILCGEGSTANVAKMCMEASRVLKPNGVLFIVSYGFPDNRLQYLDNEDYSWKVSTHTVPKPTVSAASGVANDTADASSVHYIYVCQKGAGGTDDA 212          
BLAST of mRNA_S-dermatodea_contig1344.2017.1 vs. uniprot
Match: A0A067CRN2_SAPPC (Methyltransf_11 domain-containing protein n=10 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CRN2_SAPPC)

HSP 1 Score: 298 bits (762), Expect = 6.110e-95
Identity = 131/204 (64.22%), Postives = 167/204 (81.86%), Query Frame = 1
Query:  355 EYGKGSYWDDRYTKDPEIFDWYQRYSGLKDMVSQHVRKDDNILMVGCGNSRLSEDMFDDGYATITNIDVSRVVIDQMIARYRDKPALMWQMLNVCALDYPDESFNAVIDKGTLDSVLCGEGSTANVAKMCMEISRVLKPNGVYFICSYGVPDNRLQYLENDDYSWTVTVNTIPKPTISAAAVPDTRDAESVHYLYICKKGGTAE 966
            +YGK SYWD+RYTKD E FDWYQRY+GLKD+V Q+++K DN+LM G GNSRL+E+M +DG+ TI NIDVS+VV+DQM  +Y     + WQ +NVC+L + DE+F++V DKGT+DS+LCGEGSTANVAKMC E+ RVLKPNGV+FI SYGVPDNRL YLEN++  W VTV+T+PKPT+SA  V D  DA +VHY+Y+C+KG  A+
Sbjct:    3 QYGKASYWDERYTKDAEQFDWYQRYAGLKDLVLQYLKKTDNVLMSGAGNSRLTEEMMNDGFQTIMNIDVSQVVVDQMAKKYEGHEGMQWQQMNVCSLSFSDETFDSVFDKGTMDSILCGEGSTANVAKMCQEVYRVLKPNGVFFIVSYGVPDNRLSYLENNELHWKVTVHTVPKPTVSAVQVTDAADANAVHYIYVCQKGVKAD 206          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1344.2017.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G749_ECTSI2.030e-14392.89Methyltransf_11 domain-containing protein n=2 Tax=... [more]
A0A7S2V7W5_9STRA1.130e-11576.21Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6U1K5P8_9STRA1.650e-11272.33Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S2GCN9_9STRA1.650e-11273.79Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835ZP38_9STRA5.010e-11173.04S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A7S3M8V2_9STRA1.590e-10772.95Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2AN98_9STRA2.170e-10770.39Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7R9UCD5_9STRA7.550e-10167.94Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S3K5J8_9STRA9.140e-9966.19Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A067CRN2_SAPPC6.110e-9564.22Methyltransf_11 domain-containing protein n=10 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1344contigS-dermatodea_contig1344:5920..9392 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score421.0
Seed ortholog evalue3.3e-115
Seed eggNOG ortholog2880.D7G749
EggNOG free text desc.methyltransferase activity
EggNOG OGsKOG2352@1,KOG2352@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-01_011050.1
Exons4
Model size1731
Cds size636
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1344.2017.1prot_S-dermatodea_contig1344.2017.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig1344 6673..9050 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924285.8685331-UTR-S-dermatodea_contig1344:5919..66721622924285.8685331-UTR-S-dermatodea_contig1344:5919..6672Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1344 5920..6672 -
1694079151.330403-UTR-S-dermatodea_contig1344:5919..66721694079151.330403-UTR-S-dermatodea_contig1344:5919..6672Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1344 5920..6672 -
1622924285.9183772-UTR-S-dermatodea_contig1344:9050..93921622924285.9183772-UTR-S-dermatodea_contig1344:9050..9392Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1344 9051..9392 -
1694079151.3802304-UTR-S-dermatodea_contig1344:9050..93921694079151.3802304-UTR-S-dermatodea_contig1344:9050..9392Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1344 9051..9392 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924285.8802254-CDS-S-dermatodea_contig1344:6672..68281622924285.8802254-CDS-S-dermatodea_contig1344:6672..6828Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1344 6673..6828 -
1694079151.345848-CDS-S-dermatodea_contig1344:6672..68281694079151.345848-CDS-S-dermatodea_contig1344:6672..6828Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1344 6673..6828 -
1622924285.8898842-CDS-S-dermatodea_contig1344:7266..74891622924285.8898842-CDS-S-dermatodea_contig1344:7266..7489Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1344 7267..7489 -
1694079151.3545392-CDS-S-dermatodea_contig1344:7266..74891694079151.3545392-CDS-S-dermatodea_contig1344:7266..7489Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1344 7267..7489 -
1622924285.8991983-CDS-S-dermatodea_contig1344:8158..83341622924285.8991983-CDS-S-dermatodea_contig1344:8158..8334Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1344 8159..8334 -
1694079151.3630054-CDS-S-dermatodea_contig1344:8158..83341694079151.3630054-CDS-S-dermatodea_contig1344:8158..8334Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1344 8159..8334 -
1622924285.9082139-CDS-S-dermatodea_contig1344:8969..90501622924285.9082139-CDS-S-dermatodea_contig1344:8969..9050Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1344 8970..9050 -
1694079151.371762-CDS-S-dermatodea_contig1344:8969..90501694079151.371762-CDS-S-dermatodea_contig1344:8969..9050Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1344 8970..9050 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig1344.2017.1

>prot_S-dermatodea_contig1344.2017.1 ID=prot_S-dermatodea_contig1344.2017.1|Name=mRNA_S-dermatodea_contig1344.2017.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=212bp
MAHQEYGKGSYWDDRYTKDPEIFDWYQRYSGLKDMVSQHVRKDDNILMVG
CGNSRLSEDMFDDGYATITNIDVSRVVIDQMIARYRDKPALMWQMLNVCA
LDYPDESFNAVIDKGTLDSVLCGEGSTANVAKMCMEISRVLKPNGVYFIC
SYGVPDNRLQYLENDDYSWTVTVNTIPKPTISAAAVPDTRDAESVHYLYI
CKKGGTAEEGA*
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mRNA from alignment at S-dermatodea_contig1344:5920..9392-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig1344.2017.1 ID=mRNA_S-dermatodea_contig1344.2017.1|Name=mRNA_S-dermatodea_contig1344.2017.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3473bp|location=Sequence derived from alignment at S-dermatodea_contig1344:5920..9392- (Saccorhiza dermatodea SderLu1190fm monoicous)
GCCCAGCCAGCCTGCAGTGGCGGTGAAACAGGTCTGGCGCATTAGTTCAC CAGCTGTATTATTCTGCTTCGGTGGGGATCGTGGTAGTGCTCTCGCAGGC TGTGGCTTCCAGAGACCCTTTACCTCCCGTCGTTGATAAAGCAAACGTTT CAAAAGAGGCATCGCGACACCTGTTTAGGGGTTCAGCCGCCTCTCTCTGC TGCTGCTGACCTGCTCAGAAGTGCTTGGCGAACCTGGGCCTTTCTCTACC TCTCCAAGGCGTGGTGAACCGTCCTTCTCTCCTTCCTCGCTTGGAAGTCT CCGCCATCCTTTGTGTCCAAGAGGTATTTCCCGTTTTGAAAAATGGCTCA CCAGGAGTATGGCAAAGGGTCATACTGGGACGACCGCTATACCAAGGACC CGGAGATCTTCGACTGGTATCAGGTGAGGGGTGAGGGTGCACTCCGTAGT TGAACTTACATGTAGGAGACGTCCGCCCGCTGCTGGTTCATGGGGCGGTC TCGCCTGAGTGCGTGAACTCGCTGCCTGTTGCTTCGAGTCCGAAGAAACA CAAGTTGCCGTATCATAGCACCTGCGGACATGCCGCAAAGGCGTTCGTTC ATCTGCTGTCTCAGGTCTGTTTCTACTTGTCATTGAGGTACTCCTGTATA TACTTGAGCTACACAGGCACCAAGGTGTGATGTGATTGTGATGTGACCGC AGTATCGTGCTTTGTTCGTCCATCAGGAATGTCCTGTGCTCTTGTACAAA TGTAGAGCTCTATATACATAGGCACGGAGAGATGTCCGCTCGTTCCTTGT GTGGTAGCTGATGGTTTACCTCAGTAATATCCTTCCGCAGCTATTATAAT AGTACAAGTATGTATAACAGCACTGCAGTAAGCACGTGATCAGGCAACCC TGTATATTTTTCCTCCGACCCTATAATAGTAAAATAGGCCGTCGTGCGTT GCAGTTTTCAAGCCCCAGGCCTCAGCTGCTACTGCTGTAGTGCTACAAGT GCCAGAGCTCAAGTGCAGCACTCGTGTGGCGCGTCTGTTTTTGCCCGCAT TTTCTCAGCGTTACTCTGGGCTGAAGGACATGGTCTCGCAGCACGTCCGC AAAGATGACAACATTCTAATGGTGGGGTGCGGCAACTCGAGGCTTAGCGA AGATATGTTCGACGATGGGTACGCCACGATTACCAACATCGACGTCTCGA GGGTGGTCATCGACCAGATGATCGCTCGGTACAGGTAAAGCCTGAGGAGG CATGCACATGCCACGGTTCGAACGTGTCCTTGAAGGGTTTGGCTGATACG AAGGCTCAAACTGTTTCAGCCTGCCTCTTGGACTTAGGTATGATCTATCG TGGACTAGCTTGGGGGAATTTGTGGAACGTCGAAATTTCTAGACCCCCCT CCACCCCCGTCCCCGTTTTTTTTCTCTACCTGGTATATGATAAGATACTT GTACTCAGCTGCAGCCTGTACAAATCATACTACAACTTGAGGCATAGTCT GTGGATGCAAGGCGTATGAACATATTTTAAAAGTTGTTCCCTAGGTCGTA AGCTTCACGTGTGGGCCTGCGGTGAGATAGGGGTACCTCCCATCCGTCCA TATGACCCTATAAATGTGGCTGGAGCGGGCATTTTCTTCTCAGGTTTCTC GCACGGGTCTCGATTAGCGGTTGGCATTGACGTTGCAGAGGCTGCTAGTA CTTGTGGTGTGTTGAACCTCGAACTATTCATACACACTGTGCCAGATGAT AAGTTGTGCCTCCTGAACACCGTCGCGCGTTCCTTGCGTCAAAAACCCCA CGTGTCTGGATGAACGACGTGCTCGAAAACTGCCTTTGCTATCCTTCGGC CATACGCGTAAAACTACCCAATGTCCGTCATTCCCGCTGTCTAATACGCC CAGGGACAAGCCAGCTTTGATGTGGCAGATGCTGAACGTCTGCGCCCTCG ACTACCCTGACGAGTCTTTCAACGCCGTCATCGACAAGGGAACGCTGGAT TCGGTCCTCTGCGGAGAGGGCTCCACGGCGAACGTGGCCAAAATGTGCAT GGAGATTTCCCGAGTGCTCAAGCCCAACGGAGTATACTTCATCTGCTCGT ATGGCGTACCTGACAACCGCCTTCAGGTACTATAGAAAACCTCATGGCAG GAGGTATTATCCTACCTCGCTAACTGCACGCCCTGTGCAAGGATAGCCGG GGTGCCCTCGAGCGTTTATTGCGAAATGTCCGCAGTGTAACGTACCGATA GTTTGCTCTAACGCACAGTATCGTCACCCATGTAAAAGTAGGCAAATAGC CCGGTGAACATCATCTCAAGTGCCCGGGGCATTTTCCGGTACGGCAAGCG GACGTGATGTTTTGGGCCATGGTCCGTGCATTTGACGTCGCCCATGTACT TATTCTTGGCGCGGCCGCGAGATTCACATATACCATCGCGGTGCTGATCA CACAACCCGCCAACCTCGTAATGCTATGCAATGATTATCCTCGAAAATAG TATATGATATTTGCGGTATAATTTCGATATTTTCCCGTCTCGACACTATT GCCCGGCCATGCAGTACTTGGAAAACGACGACTACAGCTGGACTGTGACC GTGAACACCATCCCGAAGCCCACCATATCGGCCGCGGCGGTTCCCGACAC GCGAGACGCCGAGAGCGTGCACTACTTGTACATTTGCAAGAAGGGCGGCA CTGCGGAGGAGGGGGCATGACCCCCCGCCCAAGGCGCATTTTGCGCGTCT CGGTCGATCGCTTCACGGTTTCTATCTTAGGCTCTTATTTTTAGGCTGGA AGCCTGCTTGAGGATGGTGTCCTAGGGAGTGTTGAGTTGGCGACGGGTGT TTTGCACTGCGGCGTTTTTTCGTGTAAAATACGAGCAGCGGCTCCCTGGC GGTGGGAGGCTCTGCATGCTCGTTTCGTGGTGTGTTTTTTTGTACTCTTG CGCTTGGGGCGGGTGTTGACGGGACGACCATGTGCCTTGCTCTGTGGCTT CTATTTAGGCGGCTGTTGGTGGTGTGTGAATAGCTGTTGTTGTTGCTGTA CGCGTGCTCTAAACGTCTTCAATTATTATAGATACATTTATTTGTTGCTG GTTTCATTTTTGTGTGGAGCGGCGCGTGTACAAACCAACGCGCTAGACAG GTTTAAGAGTCAGCGACTGCTTGGAATGGGTCTCCAGCCGGTAGGCGCAA CTTGCCAACAAACCATTGCATGAAGGTCAGATTTTAGCTTTGCCTTGCCT CTGAGCTTGCTTTTTGATCTGATTTGTCTTTAGCTCGTGTCCTGCATAAT ATGATATATGCTCCTCACGGCAGAAGAAATATATACATGCATAACTCTAT ATTATGTGGCACGTTTGTCTCCGCAAGCCCGTTGAGCCCTAGAGCACTGC TAAAACATCCGACAATGATGTGGGCCTCCACAAATTTCAAGCTCCTGAAT CATAATGGGAAATTGAAGTTGTG
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Coding sequence (CDS) from alignment at S-dermatodea_contig1344:5920..9392-

>mRNA_S-dermatodea_contig1344.2017.1 ID=mRNA_S-dermatodea_contig1344.2017.1|Name=mRNA_S-dermatodea_contig1344.2017.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1272bp|location=Sequence derived from alignment at S-dermatodea_contig1344:5920..9392- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCTCACCAGGAGTATGGCAAAGGGTCATACTGGGACGACCGCTATAC
CAAGGACCCGGAGATCTTCGACTGGTATCAGATGGCTCACCAGGAGTATG
GCAAAGGGTCATACTGGGACGACCGCTATACCAAGGACCCGGAGATCTTC
GACTGGTATCAGCGTTACTCTGGGCTGAAGGACATGGTCTCGCAGCACGT
CCGCAAAGATGACAACATTCTAATGGTGGGGTGCGGCAACTCGAGGCTTA
GCGAAGATATGTTCGACGATGGGTACGCCACGATTACCAACATCGACGTC
TCGAGGGTGGTCATCGACCAGATGATCGCTCGGTACAGCGTTACTCTGGG
CTGAAGGACATGGTCTCGCAGCACGTCCGCAAAGATGACAACATTCTAAT
GGTGGGGTGCGGCAACTCGAGGCTTAGCGAAGATATGTTCGACGATGGGT
ACGCCACGATTACCAACATCGACGTCTCGAGGGTGGTCATCGACCAGATG
ATCGCTCGGTACAGGGACAAGCCAGCTTTGATGTGGCAGATGCTGAACGT
CTGCGCCCTCGACTACCCTGACGAGTCTTTCAACGCCGTCATCGACAAGG
GAACGCTGGATTCGGTCCTCTGCGGAGAGGGCTCCACGGCGAACGTGGCC
AAAATGTGCATGGAGATTTCCCGAGTGCTCAAGCCCAACGGAGTATACTT
CATCTGCTCGTATGGCGTACCTGACAACCGCCTTCAGGGACAAGCCAGCT
TTGATGTGGCAGATGCTGAACGTCTGCGCCCTCGACTACCCTGACGAGTC
TTTCAACGCCGTCATCGACAAGGGAACGCTGGATTCGGTCCTCTGCGGAG
AGGGCTCCACGGCGAACGTGGCCAAAATGTGCATGGAGATTTCCCGAGTG
CTCAAGCCCAACGGAGTATACTTCATCTGCTCGTATGGCGTACCTGACAA
CCGCCTTCAGTACTTGGAAAACGACGACTACAGCTGGACTGTGACCGTGA
ACACCATCCCGAAGCCCACCATATCGGCCGCGGCGGTTCCCGACACGCGA
GACGCCGAGAGCGTGCACTACTTGTACATTTGCAAGAAGGGCGGCACTGC
GGAGGAGGGGGCATGATACTTGGAAAACGACGACTACAGCTGGACTGTGA
CCGTGAACACCATCCCGAAGCCCACCATATCGGCCGCGGCGGTTCCCGAC
ACGCGAGACGCCGAGAGCGTGCACTACTTGTACATTTGCAAGAAGGGCGG
CACTGCGGAGGAGGGGGCATGA
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