mRNA_S-dermatodea_contig13380.1987.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig13380.1987.1
Unique NamemRNA_S-dermatodea_contig13380.1987.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig13380.1987.1 vs. uniprot
Match: A0A6H5LDV3_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LDV3_9PHAE)

HSP 1 Score: 372 bits (955), Expect = 1.400e-122
Identity = 194/237 (81.86%), Postives = 205/237 (86.50%), Query Frame = 2 
Query:    2 RLGDAGIARVLDAAEGNAAATQVQGTLNYMDPGYMRTGTLNDKSDIYSLGVVMVELLLGAVATVGMVNRVRMSLLTQARALADGAIDWTGNTAEKLADIAHGCCTELPGQRSSLRTVHICLEATLGGQGLFVASAAVRTCRVCLTAPANTRFIPCFHSIACKEDATRLLRRRGSCPVCREPIENVEEGEFAQTFAPRDESTHRGPPPQASLAAPGIEEEKGAPEETGASAANPVAPV 712
            RLGDAGIARVLDAAE NAAATQVQGTLNY+DPGYMRTGTLNDKSDIYSLGVVMVELLLGAVATVGMVNRVRMSLLTQARALADGAI+WTGNTAEKLADIAHGCC ELP QRSSLRTVH+CLEATLGGQGLFVASAAVRTCR+CLTAPANTRFIPCFHSIAC +DAT LLRRRGSCPVCREPIE+VEEGEFAQTFAP  E               G+ E+KG       +A++ V PV
Sbjct:  434 RLGDAGIARVLDAAESNAAATQVQGTLNYIDPGYMRTGTLNDKSDIYSLGVVMVELLLGAVATVGMVNRVRMSLLTQARALADGAIEWTGNTAEKLADIAHGCCIELPAQRSSLRTVHMCLEATLGGQGLFVASAAVRTCRICLTAPANTRFIPCFHSIACNDDATNLLRRRGSCPVCREPIESVEEGEFAQTFAPHREGEAAPIEVDGRGEGQGVTEQKGEGHTEALAASSVVPPV 670
[Close]
BLAST of mRNA_S-dermatodea_contig13380.1987.1 vs. uniprot
Match: A0A836CCE9_9STRA (Receptor protein kinase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCE9_9STRA)

HSP 1 Score: 215 bits (547), Expect = 1.480e-62
Identity = 112/197 (56.85%), Postives = 140/197 (71.07%), Query Frame = 2 
Query:    2 RLGDAGIARVLDAAEG--NAAATQVQGTLNYMDPGYMRTGTLNDKSDIYSLGVVMVELLLGAVATVGMVNRVRMSLLTQARALADGAIDWTGNTAEKLADIAHGCCTELPGQRSSLRTVHICLEATLGGQGLFVASAAV-RTCRVCLTAPANTRFIPCFHSIACKEDATRLLRRRGSCPVCREPIENVEEGEFAQTF 583
            RLGDAGIA ++D + G    AATQ+QGTLNY+DP Y+RTG L +KSDIYSLGVV+VELL+G+V T GMVNRVR SLL  A  LADG+++W     +KL   AH CC E P +R  L +V   LE  +GG       AA  R C++CL+A  NTRF PC HS+AC++DA+ LL RRG CP+CRE I ++E GEF+QTF
Sbjct:  414 RLGDAGIASIMDQSRGVNGTAATQLQGTLNYLDPAYLRTGALTEKSDIYSLGVVIVELLMGSVCTPGMVNRVRGSLLGSASTLADGSVEWPEGAVDKLGQQAHSCCHEDPAKRPELPSVITALEELVGGAPTGSEDAAQPRECKICLSARPNTRFRPCLHSVACEQDASLLLERRGRCPLCRELILDIEIGEFSQTF 610
[Close]
BLAST of mRNA_S-dermatodea_contig13380.1987.1 vs. uniprot
Match: A0A0D2WIM8_CAPO3 (TKL/IRAK protein kinase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WIM8_CAPO3)

HSP 1 Score: 97.4 bits (241), Expect = 1.420e-19
Identity = 64/206 (31.07%), Postives = 102/206 (49.51%), Query Frame = 2 
Query:    2 RLGDAGIARVLDA---AEGNAAATQVQGTLNYMDPGYMRTGTLNDKSDIYSLGVVMVELLLGAVATVGMVNRVRMSLLTQAR--ALADGAIDWT---GNTAEKLADIAHGCCTELPGQRSSLRTVHICLEATLGGQGLFVASAAV----RTCRVCLTAPANTRFIPCFHSIACKEDATRLLRRRGSCPVCREPIENVEEGEFAQTF 583
            ++ D G+ R + A   A        VQGTL Y+ P Y   G ++ K+D+YS G++++EL+ G   ++ ++  VR  L    +  A+ D AIDW+      A+ LA++A  C  +    R S   +   L     G     A  AV    R C VC +AP N + +PC+H+  C   A  +++R+  C +CR    +  EG F +TF
Sbjct:  353 KVADFGLTRSVPAQVDAHSYIRTQTVQGTLQYICPQYRDEGKVSIKTDVYSYGMILLELVTGQQPSIDLMASVRHQLKRNRKIDAVLDKAIDWSIPDKEAAQALAELAEDCLEQARVYRPSFEDILHRLSGGGAGANEEEAEEAVAGSQRECLVCFSAPTNAQLMPCYHACVCVACAQWMIQRQDKCMICRVLSTSYREGTFTETF 558
[Close]
BLAST of mRNA_S-dermatodea_contig13380.1987.1 vs. uniprot
Match: UPI000352406B (hypothetical protein, variant 2 n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=UPI000352406B)

HSP 1 Score: 97.1 bits (240), Expect = 2.340e-19
Identity = 65/206 (31.55%), Postives = 105/206 (50.97%), Query Frame = 2 
Query:    2 RLGDAGIARVLDAA--EGNAAATQ-VQGTLNYMDPGYMRTGTLNDKSDIYSLGVVMVELLLGAVATVGMVNRVRMSLLTQAR--ALADGAIDWTGNTAEKL----ADIAHGCCTELPGQRSSLRTVHICLEATLGGQ-GLFVASAAVRTCRVCLTAPANTRFIPCFHSIACKEDATRLLRRRGSCPVCREPIENVEEGEFAQTFAP 589
            ++ D G+ R + A   E +   TQ VQGTL Y+ P Y + G ++ K+D+YS G++++EL+ G   ++ ++  VR  L    +  A+ D AIDW+ +  E       D+A  C  +    R S   +   L    G + G     A  R C +C  AP N + +PC H+  C   A  +++R  +CP+CR  + + +EG F  TF P
Sbjct:  665 KVADFGLTRSVPAQVDEHSYIRTQTVQGTLQYICPQYHQEGKVSIKTDVYSYGMILLELVTGQQPSIDLLANVRRELKRSRKIDAVLDKAIDWSIHDKEAAQVMAGDLAVDCLEQARVDRPSFGEI---LRRLSGEEAGANEEDAIERECLICCDAPTNAKLMPCCHACVCVACAQVMIQRHDNCPICRVRLTSFQEGAFNHTFVP 867
[Close]
BLAST of mRNA_S-dermatodea_contig13380.1987.1 vs. uniprot
Match: A0A0D2W0S7_CAPO3 (TKL/IRAK protein kinase n=3 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2W0S7_CAPO3)

HSP 1 Score: 97.1 bits (240), Expect = 2.520e-19
Identity = 65/206 (31.55%), Postives = 105/206 (50.97%), Query Frame = 2 
Query:    2 RLGDAGIARVLDAA--EGNAAATQ-VQGTLNYMDPGYMRTGTLNDKSDIYSLGVVMVELLLGAVATVGMVNRVRMSLLTQAR--ALADGAIDWTGNTAEKL----ADIAHGCCTELPGQRSSLRTVHICLEATLGGQ-GLFVASAAVRTCRVCLTAPANTRFIPCFHSIACKEDATRLLRRRGSCPVCREPIENVEEGEFAQTFAP 589
            ++ D G+ R + A   E +   TQ VQGTL Y+ P Y + G ++ K+D+YS G++++EL+ G   ++ ++  VR  L    +  A+ D AIDW+ +  E       D+A  C  +    R S   +   L    G + G     A  R C +C  AP N + +PC H+  C   A  +++R  +CP+CR  + + +EG F  TF P
Sbjct: 1050 KVADFGLTRSVPAQVDEHSYIRTQTVQGTLQYICPQYHQEGKVSIKTDVYSYGMILLELVTGQQPSIDLLANVRRELKRSRKIDAVLDKAIDWSIHDKEAAQVMAGDLAVDCLEQARVDRPSFGEI---LRRLSGEEAGANEEDAIERECLICCDAPTNAKLMPCCHACVCVACAQVMIQRHDNCPICRVRLTSFQEGAFNHTFVP 1252
[Close]
BLAST of mRNA_S-dermatodea_contig13380.1987.1 vs. uniprot
Match: A0A0D2VV32_CAPO3 (TKL/IRAK protein kinase n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VV32_CAPO3)

HSP 1 Score: 95.9 bits (237), Expect = 5.250e-19
Identity = 58/183 (31.69%), Postives = 92/183 (50.27%), Query Frame = 2 
Query:   68 VQGTLNYMDPGYMRTGTLNDKSDIYSLGVVMVELLLGAVATVGMVNRVRMSLLTQAR--ALADGAIDWTGNTAEK---LADIAHGCCTELPGQRSSLRTVHICLEATLGGQGLFVASAAV----RTCRVCLTAPANTRFIPCFHSIACKEDATRLLRRRGSCPVCREPIENVEEGEFAQTFAP 589
            VQGTL Y+ P Y   G ++ K+D+YS G++++EL+ G   ++ +++ VR  L    +  AL D A+DW+    E    +A++A  C       R S   V   L    G +        +    R C +C +AP N + +PC H+  C   A  +++RR  C +CR P    E G++ QTF P
Sbjct:  446 VQGTLQYICPQYQHEGKVSVKTDVYSYGMILLELVTGQQPSIDLMSTVRHQLKRSRKIDALLDKAVDWSSQDKESVQVIAELAVDCLDPARVYRPSFGEV---LRRLSGEEAEVNEDEPIENSDRECLLCWSAPTNAKLMPCCHACVCVACAQEMIQRRDKCMICRVPPTAFETGKYNQTFVP 625
[Close]
BLAST of mRNA_S-dermatodea_contig13380.1987.1 vs. uniprot
Match: UPI00035228B6 (hypothetical protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=UPI00035228B6)

HSP 1 Score: 95.9 bits (237), Expect = 5.780e-19
Identity = 58/183 (31.69%), Postives = 92/183 (50.27%), Query Frame = 2 
Query:   68 VQGTLNYMDPGYMRTGTLNDKSDIYSLGVVMVELLLGAVATVGMVNRVRMSLLTQAR--ALADGAIDWTGNTAEK---LADIAHGCCTELPGQRSSLRTVHICLEATLGGQGLFVASAAV----RTCRVCLTAPANTRFIPCFHSIACKEDATRLLRRRGSCPVCREPIENVEEGEFAQTFAP 589
            VQGTL Y+ P Y   G ++ K+D+YS G++++EL+ G   ++ +++ VR  L    +  AL D A+DW+    E    +A++A  C       R S   V   L    G +        +    R C +C +AP N + +PC H+  C   A  +++RR  C +CR P    E G++ QTF P
Sbjct:  647 VQGTLQYICPQYQHEGKVSVKTDVYSYGMILLELVTGQQPSIDLMSTVRHQLKRSRKIDALLDKAVDWSSQDKESVQVIAELAVDCLDPARVYRPSFGEV---LRRLSGEEAEVNEDEPIENSDRECLLCWSAPTNAKLMPCCHACVCVACAQEMIQRRDKCMICRVPPTAFETGKYNQTFVP 826
[Close]
BLAST of mRNA_S-dermatodea_contig13380.1987.1 vs. uniprot
Match: A0A0D2X0T2_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X0T2_CAPO3)

HSP 1 Score: 90.9 bits (224), Expect = 7.260e-19
Identity = 56/180 (31.11%), Postives = 91/180 (50.56%), Query Frame = 2 
Query:   68 VQGTLNYMDPGYMRTGTLNDKSDIYSLGVVMVELLLGAVATVGMVNRVRMSLLTQAR--ALADGAIDWT---GNTAEKLA-DIAHGCCTELPGQRSSLRTV--HICLEATLGGQGLFVASAAVRTCRVCLTAPANTRFIPCFHSIACKEDATRLLRRRGSCPVCREPIENVEEGEFAQTF 583
            VQGT  Y+ P Y   G ++ K+D+YS G++++EL+ G   ++ ++  VR  L    +  A+ D AIDW+     +A  +A D+A  C       R S   +   +  E   G         + R C VC +AP N + +PC+H+  C   A  +++RR  C +CR    + +EG + QTF
Sbjct:   14 VQGTAQYICPEYHHEGKVSIKTDVYSYGMILLELVTGQPPSINLMANVRRELKKSRKIDAVLDKAIDWSIPEKESAHAMATDLAPDCLETARIDRPSFGEILRRLSGEEATGTNEEETIEGSDRECLVCFSAPTNAKLMPCYHACVCVACAQWMIQRRDKCMICRVLPSSFQEGTYNQTF 193
[Close]
BLAST of mRNA_S-dermatodea_contig13380.1987.1 vs. uniprot
Match: A0A0D2UGK4_CAPO3 (TKL/IRAK protein kinase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UGK4_CAPO3)

HSP 1 Score: 95.5 bits (236), Expect = 7.790e-19
Identity = 55/181 (30.39%), Postives = 93/181 (51.38%), Query Frame = 2 
Query:   68 VQGTLNYMDPGYMRTGTLNDKSDIYSLGVVMVELLLGAVATVGMVNRVRMSLLTQAR--ALADGAIDWTGN---TAEKLADIAHGCCTELPGQRSSLRTV--HICLEATLGGQGLFVASAAVRTCRVCLTAPANTRFIPCFHSIACKEDATRLLRRRGSCPVCREPIENVEEGEFAQTFAP 589
            VQGTL Y+ P Y + G ++ K+D+YS G++++EL+ G   ++ ++  VR  L    +  A+ D AIDW+     +A+ +A+ A  C       R S   +   +  E   G     +   + R C VC  AP N + +PC H+  C   A  +++RR  C +CR    + ++G + +TF P
Sbjct:  630 VQGTLQYICPQYHQEGKVSIKTDVYSYGMILLELVTGQQPSIDLMGTVRHQLKRSRKIDAVLDKAIDWSSEAKESAQAIAEHAADCLEPTRVDRPSFGEILRRLSGEEVAGANEEEIIEGSDRECLVCYNAPTNAKLMPCHHACVCVACAQWMIQRRDKCMICRVLPTSFQQGTYTKTFVP 810
[Close]
BLAST of mRNA_S-dermatodea_contig13380.1987.1 vs. uniprot
Match: A0A0D2WPY9_CAPO3 (TKL/IRAK protein kinase n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WPY9_CAPO3)

HSP 1 Score: 94.4 bits (233), Expect = 1.950e-18
Identity = 63/208 (30.29%), Postives = 103/208 (49.52%), Query Frame = 2 
Query:    2 RLGDAGIARVLDA---AEGNAAATQVQGTLNYMDPGYMRTGTLNDKSDIYSLGVVMVELLLGAVATVGMVNRVRMSLLTQAR--ALADGAIDWTGN---TAEKLADIAHGCCTELPGQRSSLRTVHICLEATLGGQGLFVASAAV----RTCRVCLTAPANTRFIPCFHSIACKEDATRLLRRRGSCPVCREPIENVEEGEFAQTFAP 589
            ++ D G+ R   A   A  +     VQGTL Y+ P Y   G ++ K+D+YS G++++EL+ G   ++ ++  VR  L    +  A+ D AIDW+     +A+ +A++A  C  +    R S   +   L    G +       AV    R C VC +AP N + +PC H+  C   A  +++R+  C +CR      E G++ QTF P
Sbjct:  617 KVADFGLTRSAPAQVDAHSSIRTQTVQGTLQYICPQYRDEGKVSIKTDVYSYGMILLELVTGQQPSIDLLANVRRELKRSRKIDAVLDKAIDWSPQDKESAQAIAELAVDCLEQARVDRPSFGEI---LRRLSGEEAEVNEEEAVAGSERECLVCWSAPTNAKLMPCCHACVCVGCAQEMIQRQDKCMICRVLPTTFETGKYNQTFVP 821
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13380.1987.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LDV3_9PHAE1.400e-12281.86Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A836CCE9_9STRA1.480e-6256.85Receptor protein kinase-like protein n=1 Tax=Tribo... [more]
A0A0D2WIM8_CAPO31.420e-1931.07TKL/IRAK protein kinase n=1 Tax=Capsaspora owczarz... [more]
UPI000352406B2.340e-1931.55hypothetical protein, variant 2 n=1 Tax=Capsaspora... [more]
A0A0D2W0S7_CAPO32.520e-1931.55TKL/IRAK protein kinase n=3 Tax=Capsaspora owczarz... [more]
A0A0D2VV32_CAPO35.250e-1931.69TKL/IRAK protein kinase n=2 Tax=Capsaspora owczarz... [more]
UPI00035228B65.780e-1931.69hypothetical protein n=1 Tax=Capsaspora owczarzaki... [more]
A0A0D2X0T2_CAPO37.260e-1931.11Uncharacterized protein n=1 Tax=Capsaspora owczarz... [more]
A0A0D2UGK4_CAPO37.790e-1930.39TKL/IRAK protein kinase n=1 Tax=Capsaspora owczarz... [more]
A0A0D2WPY9_CAPO31.950e-1830.29TKL/IRAK protein kinase n=2 Tax=Capsaspora owczarz... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13380contigS-dermatodea_contig13380:1136..5251 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score325.5
Seed ortholog evalue1.9e-86
Seed eggNOG ortholog2880.D8LF75
EggNOG free text desc.Universal stress protein family
EggNOG OGs2S11J@2759,COG0515@1
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-06_001940.1
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size726
Cds size630
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924283.4273577-UTR-S-dermatodea_contig13380:1135..11431622924283.4273577-UTR-S-dermatodea_contig13380:1135..1143Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig13380 1136..1143 -
1694079149.4447167-UTR-S-dermatodea_contig13380:1135..11431694079149.4447167-UTR-S-dermatodea_contig13380:1135..1143Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig13380 1136..1143 -
1622924283.4945781-UTR-S-dermatodea_contig13380:5163..52511622924283.4945781-UTR-S-dermatodea_contig13380:5163..5251Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig13380 5164..5251 -
1694079149.540341-UTR-S-dermatodea_contig13380:5163..52511694079149.540341-UTR-S-dermatodea_contig13380:5163..5251Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig13380 5164..5251 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924283.44021-CDS-S-dermatodea_contig13380:1143..12841622924283.44021-CDS-S-dermatodea_contig13380:1143..1284Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13380 1144..1284 -
1694079149.4560473-CDS-S-dermatodea_contig13380:1143..12841694079149.4560473-CDS-S-dermatodea_contig13380:1143..1284Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13380 1144..1284 -
1622924283.4582362-CDS-S-dermatodea_contig13380:1488..16121622924283.4582362-CDS-S-dermatodea_contig13380:1488..1612Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13380 1489..1612 -
1694079149.4677434-CDS-S-dermatodea_contig13380:1488..16121694079149.4677434-CDS-S-dermatodea_contig13380:1488..1612Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13380 1489..1612 -
1622924283.467504-CDS-S-dermatodea_contig13380:1988..21351622924283.467504-CDS-S-dermatodea_contig13380:1988..2135Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13380 1989..2135 -
1694079149.4854584-CDS-S-dermatodea_contig13380:1988..21351694079149.4854584-CDS-S-dermatodea_contig13380:1988..2135Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13380 1989..2135 -
1622924283.4757814-CDS-S-dermatodea_contig13380:4439..46011622924283.4757814-CDS-S-dermatodea_contig13380:4439..4601Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13380 4440..4601 -
1694079149.506999-CDS-S-dermatodea_contig13380:4439..46011694079149.506999-CDS-S-dermatodea_contig13380:4439..4601Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13380 4440..4601 -
1622924283.4845278-CDS-S-dermatodea_contig13380:5107..51631622924283.4845278-CDS-S-dermatodea_contig13380:5107..5163Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13380 5108..5163 -
1694079149.523017-CDS-S-dermatodea_contig13380:5107..51631694079149.523017-CDS-S-dermatodea_contig13380:5107..5163Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13380 5108..5163 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13380.1987.1prot_S-dermatodea_contig13380.1987.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig13380 1144..5163 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig13380.1987.1

>prot_S-dermatodea_contig13380.1987.1 ID=prot_S-dermatodea_contig13380.1987.1|Name=mRNA_S-dermatodea_contig13380.1987.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=210bp
MDPGYMRTGTLNDKSDIYSLGVVMVELLLGAVATVGMVNRVRMSLLTQAR
ALADGAIDWTGNTAEKLADIAHGCCTELPGQRSSLRTVHICLEATLGGQG
LFVASAAVRTCRVCLTAPANTRFIPCFHSIACKEDATRLLRRRGSCPVCR
EPIENVEEGEFAQTFAPRDESTHRGPPPQASLAAPGIEEEKGAPEETGAS
AANPVAPVG*
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mRNA from alignment at S-dermatodea_contig13380:1136..5251-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig13380.1987.1 ID=mRNA_S-dermatodea_contig13380.1987.1|Name=mRNA_S-dermatodea_contig13380.1987.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4116bp|location=Sequence derived from alignment at S-dermatodea_contig13380:1136..5251- (Saccorhiza dermatodea SderLu1190fm monoicous)
TCGCCTCGGCGACGCGGGCATCGCGCGAGTGCTGGACGCGGCGGAGGGGA
ATGCGGCGGCCACTCAGGTGCAGGGGACGCTGAACTACATGGACCCTGGG
TACATGCGGACGGGGACGCTCAACGATAAATCGGACATCTACAGGTACAG
TACAGTCGTAGGAGGCGCTTGCTTTGCTTTGCTCGGGTATTCAATTAGAG
GCAAATCACGAATTTGTACATATTCCTCCTTTTCATTTCTTTATTTACTT
CGAAGTGTTTACCATGACTTGTTAACAAAACAAATACCTTCGAACTCCTA
TTAATAGACGTTTTTCACACCATGATGTGTTGTTTCATGTATGTACCTCT
TGTATGCAATGCTTGCTGTATGATATGTGTTTCAGAGCGTTTGTTTGCTT
TCAACAATATTTTTACCTTGTTTTATGTATGTACTATTATACTACTTGTT
ATGTACTGCTGTATGTGCTTGAGAGCGTTTATTTTTTCTTCAACACTTTA
TCCCCTTCTTCTTCTTCCTCTCTTCTTCTTCTTACCCCCCTCGTGCGCAC
GCTGGGGTCGGGTCGGGTCGGGTCGGGTCGGGTCGGGTCGGGTCGGGTTG
CGTGGGACGGTGTGTTGTGTGTGTACGTGTGTGGGTACACGTGCACACAG
CCTGGGGGTGGTGATGGTGGAGCTGCTGCTGGGCGCCGTGGCTACCGTGG
GGATGGTGAACCGCGTGCGGATGTCCTTGCTCACCCAGGCAAGGGCCCTG
GCCGACGGAGCGATAGACTGGACGGGGAACACGGCGGAAAAGCTCGCCGA
CATTGCGCACGGGTGAGCGCCAGGGGGGGGGGGGGGGGTATACATCGCAT
GAAACCATTGCATCGCACGATATGTAAGCCTCCATACACTAGATGTAGCT
TTCACCGTATTTTCCCTTTTAAAAAAAGATGCGACCCCAACGCTCGCTCT
GTGTCTTCGAAATCATTTAGTTATTCAATTTTTGGGTGGGGAGTCGGGAG
GCGTACTCAAGTTGTACGTTCATTGGATATTAGGCCATTGACCACGCGTT
CGTCCTCGGGAAGGACGGAGCATTGTTCCCACAGGATCGATCGATCGCCG
ACGGCCAAGGTTAAGCTTTCCTTCTTGGTTTTGGTTTTGCGATAGGTGGG
GAATTTTTTTTTTATGAGGCTTGTCACAGAGCCAAACCATTTGAGAGTCA
CACACACACCGCCGCGATGTTGTCGCCCAGTCAAAGACATTCCCACACAA
TAACGGCCCCCAATAACATGCATACTGTATATGCGTTCCGTAAACAATTG
GCATCATACGAAGACGTTACACGTTACGTGAACCTCCGTAGGCTTATTAT
TATATAATAGTAGTAGACTGGAACCGTCTCTCCCTCCCTTTAGAAAAGCG
GTTGGGACCCTAACGCTCGCTATATGCTGTTATTTTTATATTTTATTTCT
TTGTTTCTATGTACCTGTGTTAAACGCATGTCTTATCCAGACAGACATAG
ACCCGCGCGTGCCAACAATGCCGGGACGGAGCGATATGCCGGGGGGGGGG
GGGTGGTGTACTTATGTTAAACGCACATCGTATCCAGACGGACATATACC
ACGCGTCCCAACAATGCCGGAACGGAGCGATATGCCGGGTTTTCGCCGGC
GGCAGGCTGCGTTTCACAAGGATGATACAGTACCAGCTGCTGGTCATCAT
CCTTGTGTTTGGGGGGTCGTTTTTTCGATTGCTGATTCAACGTCAAAACA
CGGCGCGCAAAAGCAGCAGTACAAATTGCTAATCGAGCTATCATTTGATT
GATTGATTGGTTGATTGTTTTGACTATTATTTATGTCACACTTACAACCG
ACCGGCCCACCAATGGTTGCCGACCCCGCTCGTAGTAGTCAGATGAGAAG
TCGAAAGATCGAAAAAAAAACTAAAATCGGGAATTACCCCTTTAATTGTA
TTTATTTTAGCATGTTATGAAGGAATTGACATAATAAACTCTCCTGTTAA
TGGGCTCTTTCGATTCCATTCGATATTTTCAAACCAGAACCGCGTTCGAG
GAGGACATGCATGTGTCAAAAGGCAAGAGGTATCAAATCGTCAGACTTCA
AGACGCTACCCGTCTTTAAAACAAAGTGATTTCAAAAGACAGCGAGCGTT
GCGGTCCCACCTTTTCGAAATGGAAGATGATCCAAGTTACTCTATGTACA
CTTACGGAAGCTTAATTACGTTACGTGGTACGTAGGATGCCATGGCTTCT
GCATCATTTTTTTTTTTGCACACATATGATAAGGTAGACTTGCTTTTCCG
AGGTCCGTCTGTGGTCACAAGGGATTGATCAATCATCCCATCTCTCTTAT
CTTATCCCCGGTTCTCACTTTTCATTATTTATCGCGACTGCATTGGGTTC
GGCACTCCCGCAGCTCGCCGATTTCTCGGATTTCTATACGGGCAATAGGG
TTACCGTTACGAGTGTCTTGTCCTAAGCGATATCCTGGTAATGTAGCTTT
GATGTTCTTTGTGAGCCAAGGATATTTTATTACCAGACAGTGCCCCCCCC
ACCCCCCCCACCCCCCCCCCCCCCCCACCCCCCCCCCACCCGCCAGCAAC
CACNNNNNNNNNNTTTTTTCCGGTAAAGGGTGTTCTTTTTCTGGTTTTTT
TTTCCACACATATTTCTTTTTTTTTTCCTTTTTTTTTTTTTTTTCGCCAC
GGAATTTTTTTTTCCAAACCCGCCCCCCCCCCCCCCCCCCCCCGCCTTCT
CAAACGCAGCCTAGCTGGCGAAAAGATACGTCAAACCGCACCGTCCCGGC
ATTGCCGTCGGGACTCGTGGCCTATCATGTCCGTTTGGATGCGACGTGCA
AAAAACAACGCAAGCACCCACCCCCCTGAAACTTTAACATAACATAAGTT
CAAAAACGAACGAGCGAGCGTTGGGGCCCCACCCTTTTTTGAAGTAACGT
AAACGATGGTCCAAGCTATCATGTATATGTATATAAGCTATCATGTATAT
GTATATACACCTGTTGAGAAGGCCTACCGTTAGGTGTGATGCTATTAGTA
TGATACGGGGTTATGGCAAGTATCAAGCACTCTTGTCCTGTCGCTCGCGG
GAATTTGCAAACGCAGGTGCTGTACGGAGCTTCCGGGTCAGCGCTCCAGC
CTCCGCACGGTGCACATCTGCCTGGAGGCTACCCTCGGAGGGCAGGGGCT
GTTTGTGGCGAGCGCGGCCGTTCGCACGTGCCGAGTTTGTCTCACCGCTC
CGGCGAACACGAGGTTTGTTGCTTTCGCTGTTTGGAAGGTGGCCGGGGAG
GAAGGGGGGGGCGGGCAACCTAGCTCCTACTTTGTAGAGAGGCGTTTGAA
GACCACTTGCCTCATTCCATCAAATTTATATTTTATACACATTCAGGGGG
CGGGAGGGGGAGGGGGGGGGGGGGGGATAGCGTTGGCTCGCTTTTTTGTT
ATTGTTGCAATCTTTAGGGGGTTTGTTTGCGTCTGGAAGGCGGGTGGGGG
ACGGGGGGGGGGGGTGCTTGCCTCATCGCAACGTGTTGTTGTTGAGATGG
TGCTTGTTTCGTTGTTCTCCTACGTTTTTATTTAACCTTTCTTGCGATGT
TGTTCGAATCACCCCTCCCCCCCTCCCCCCTCTCGGCAGGTTCATCCCCT
GCTTCCACTCGATTGCGTGTAAGGAAGACGCGACGAGGCTGTTGAGGAGG
CGAGGATCGTGCCCCGTTTGCCGGGAGCCCATAGAGAACGTCGAGGAGGG
AGAGTTTGCCCAGGTAATTGATTGATTGATTGATTGATTGATTGATTGAT
TCGTTCGTTGGTTGCTTGGTTGAGTGACTGAGTGAGTGACTGATTGATGC
ACTCTATTATAGCACAAGTATAGCCGCAAAACTAGAGTACAGCCCCCCCC
CCACTCCCCACACGCCGACCCCCCACCCCCCCCACTCTCTTCCTATCATG
CACGGTTGACTCGGCAGACTTTTGCACCTCGGGACGAGTCCACGCATAGG
GGGCCTCCGCCGCAAGCGTCGCTGGCCGCACCGGGGATCGAGGAAGAAAA
GGGCGCGCCGGAGGAGACGGGTGCTTCCGCCGCGAATCCCGTCGCACCTG
TGGGGTAGGCGCGTGG
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Coding sequence (CDS) from alignment at S-dermatodea_contig13380:1136..5251-

>mRNA_S-dermatodea_contig13380.1987.1 ID=mRNA_S-dermatodea_contig13380.1987.1|Name=mRNA_S-dermatodea_contig13380.1987.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1260bp|location=Sequence derived from alignment at S-dermatodea_contig13380:1136..5251- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGACCCTGGGTACATGCGGACGGGGACGCTCAACGATAAATCGGACAT
CTACAGATGGACCCTGGGTACATGCGGACGGGGACGCTCAACGATAAATC
GGACATCTACAGCCTGGGGGTGGTGATGGTGGAGCTGCTGCTGGGCGCCG
TGGCTACCGTGGGGATGGTGAACCGCGTGCGGATGTCCTTGCTCACCCAG
GCAAGGGCCCTGGCCGACGGAGCGATAGACTGGACGGGGAACACGGCGGA
AAAGCTCGCCGACATTGCGCACGGCCTGGGGGTGGTGATGGTGGAGCTGC
TGCTGGGCGCCGTGGCTACCGTGGGGATGGTGAACCGCGTGCGGATGTCC
TTGCTCACCCAGGCAAGGGCCCTGGCCGACGGAGCGATAGACTGGACGGG
GAACACGGCGGAAAAGCTCGCCGACATTGCGCACGGGTGCTGTACGGAGC
TTCCGGGTCAGCGCTCCAGCCTCCGCACGGTGCACATCTGCCTGGAGGCT
ACCCTCGGAGGGCAGGGGCTGTTTGTGGCGAGCGCGGCCGTTCGCACGTG
CCGAGTTTGTCTCACCGCTCCGGCGAACACGAGGTGCTGTACGGAGCTTC
CGGGTCAGCGCTCCAGCCTCCGCACGGTGCACATCTGCCTGGAGGCTACC
CTCGGAGGGCAGGGGCTGTTTGTGGCGAGCGCGGCCGTTCGCACGTGCCG
AGTTTGTCTCACCGCTCCGGCGAACACGAGGTTCATCCCCTGCTTCCACT
CGATTGCGTGTAAGGAAGACGCGACGAGGCTGTTGAGGAGGCGAGGATCG
TGCCCCGTTTGCCGGGAGCCCATAGAGAACGTCGAGGAGGGAGAGTTTGC
CCAGGTTCATCCCCTGCTTCCACTCGATTGCGTGTAAGGAAGACGCGACG
AGGCTGTTGAGGAGGCGAGGATCGTGCCCCGTTTGCCGGGAGCCCATAGA
GAACGTCGAGGAGGGAGAGTTTGCCCAGACTTTTGCACCTCGGGACGAGT
CCACGCATAGGGGGCCTCCGCCGCAAGCGTCGCTGGCCGCACCGGGGATC
GAGGAAGAAAAGGGCGCGCCGGAGGAGACGGGTGCTTCCGCCGCGAATCC
CGTCGCACCTGTGGGGTAGACTTTTGCACCTCGGGACGAGTCCACGCATA
GGGGGCCTCCGCCGCAAGCGTCGCTGGCCGCACCGGGGATCGAGGAAGAA
AAGGGCGCGCCGGAGGAGACGGGTGCTTCCGCCGCGAATCCCGTCGCACC
TGTGGGGTAG
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