mRNA_S-dermatodea_contig13324.1969.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig13324.1969.1 vs. uniprot
Match: D7FLS7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLS7_ECTSI) HSP 1 Score: 114 bits (284), Expect = 5.050e-31 Identity = 59/66 (89.39%), Postives = 65/66 (98.48%), Query Frame = 1
Query: 10 ELQALAASRTQFYQQANENGMVKQELDLLEDDAKVFKLIGPVLMKQDLEESRQNVAKRLELIEREM 207
ELQALAASR+QFYQQANENGMVKQELDLLED+A VFKL+GPVL+KQDLEE++QNVAKRLELIEREM
Sbjct: 23 ELQALAASRSQFYQQANENGMVKQELDLLEDEAPVFKLVGPVLIKQDLEEAKQNVAKRLELIEREM 88
BLAST of mRNA_S-dermatodea_contig13324.1969.1 vs. uniprot
Match: A0A7S2Y415_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y415_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.350e-21 Identity = 46/66 (69.70%), Postives = 55/66 (83.33%), Query Frame = 1
Query: 10 ELQALAASRTQFYQQANENGMVKQELDLLEDDAKVFKLIGPVLMKQDLEESRQNVAKRLELIEREM 207
E+Q L R + YQQANENGMVKQELDLL+ V+K+IGPVLMKQDL+E+R NVAKRL+LI+REM
Sbjct: 21 EIQELMEKRQKTYQQANENGMVKQELDLLDSTTPVYKMIGPVLMKQDLDEARDNVAKRLDLIQREM 86
BLAST of mRNA_S-dermatodea_contig13324.1969.1 vs. uniprot
Match: A0A5D6XI54_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XI54_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 3.550e-21 Identity = 46/67 (68.66%), Postives = 55/67 (82.09%), Query Frame = 1
Query: 7 EELQALAASRTQFYQQANENGMVKQELDLLEDDAKVFKLIGPVLMKQDLEESRQNVAKRLELIEREM 207
EE+Q LA R Q+ QQANEN MVK+ELDLL DDAKVFKLIGPVL+KQD++E++ NV KRLE I E+
Sbjct: 21 EEVQVLATQRQQYAQQANENTMVKKELDLLSDDAKVFKLIGPVLLKQDVDEAKANVNKRLEFINNEL 87
BLAST of mRNA_S-dermatodea_contig13324.1969.1 vs. uniprot
Match: A0A8K1CR62_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CR62_PYTOL) HSP 1 Score: 85.1 bits (209), Expect = 1.050e-19 Identity = 45/67 (67.16%), Postives = 53/67 (79.10%), Query Frame = 1
Query: 7 EELQALAASRTQFYQQANENGMVKQELDLLEDDAKVFKLIGPVLMKQDLEESRQNVAKRLELIEREM 207
EE+Q LA R Q+ QQA+EN MV+QELDLL DDAKVFKLIGPVL+KQD E++ NV KRLE I E+
Sbjct: 19 EEVQVLATQRQQYAQQASENTMVQQELDLLGDDAKVFKLIGPVLLKQDASEAKTNVKKRLEFINNEL 85
BLAST of mRNA_S-dermatodea_contig13324.1969.1 vs. uniprot
Match: F0WAV7_9STRA (Uncharacterized protein AlNc14C48G3819 n=2 Tax=Albugo TaxID=65356 RepID=F0WAV7_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.490e-19 Identity = 41/67 (61.19%), Postives = 55/67 (82.09%), Query Frame = 1
Query: 7 EELQALAASRTQFYQQANENGMVKQELDLLEDDAKVFKLIGPVLMKQDLEESRQNVAKRLELIEREM 207
EELQ L A + ++ QQANEN MVKQELDL+ D+ KV+K++GPVL+KQDLEE++ NV KR+E I+ E+
Sbjct: 17 EELQVLVAQQQKYRQQANENNMVKQELDLVHDETKVYKMVGPVLLKQDLEEAKTNVNKRIEFIKHEL 83
BLAST of mRNA_S-dermatodea_contig13324.1969.1 vs. uniprot
Match: A0A3F2RF90_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A3F2RF90_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.610e-19 Identity = 42/67 (62.69%), Postives = 56/67 (83.58%), Query Frame = 1
Query: 7 EELQALAASRTQFYQQANENGMVKQELDLLEDDAKVFKLIGPVLMKQDLEESRQNVAKRLELIEREM 207
+E+Q LAA R + QQANEN MVK+ELDLL+++AKVFKL+GPVL+KQD++E++ NV KRLE I E+
Sbjct: 20 DEVQVLAAQRQTYAQQANENDMVKKELDLLDEEAKVFKLVGPVLLKQDVDEAKTNVNKRLEFINNEL 86
BLAST of mRNA_S-dermatodea_contig13324.1969.1 vs. uniprot
Match: A0A2D4C4U7_PYTIN (STI1 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4U7_PYTIN) HSP 1 Score: 89.4 bits (220), Expect = 2.250e-19 Identity = 46/67 (68.66%), Postives = 55/67 (82.09%), Query Frame = 1
Query: 7 EELQALAASRTQFYQQANENGMVKQELDLLEDDAKVFKLIGPVLMKQDLEESRQNVAKRLELIEREM 207
EE+Q LA R QF QQANEN MVKQELDLLEDDAKV+KLIGPVL+KQ++ +++ NV KRLE I E+
Sbjct: 290 EEVQVLATQRQQFAQQANENSMVKQELDLLEDDAKVYKLIGPVLLKQEVGDAKTNVKKRLEFINNEL 356
BLAST of mRNA_S-dermatodea_contig13324.1969.1 vs. uniprot
Match: A0A6V1PDA7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PDA7_HETAK) HSP 1 Score: 83.6 bits (205), Expect = 5.770e-19 Identity = 42/66 (63.64%), Postives = 52/66 (78.79%), Query Frame = 1
Query: 10 ELQALAASRTQFYQQANENGMVKQELDLLEDDAKVFKLIGPVLMKQDLEESRQNVAKRLELIEREM 207
+LQ L R QFY ANENGMV QELDLL DDA+VFK++GPVL+KQDL E++ NV KRL+ I+ +M
Sbjct: 21 DLQELMFKRQQFYSSANENGMVAQELDLLADDAQVFKMLGPVLIKQDLAEAKDNVTKRLDFIQDQM 86
BLAST of mRNA_S-dermatodea_contig13324.1969.1 vs. uniprot
Match: D0NCV8_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NCV8_PHYIT) HSP 1 Score: 83.2 bits (204), Expect = 6.490e-19 Identity = 41/67 (61.19%), Postives = 54/67 (80.60%), Query Frame = 1
Query: 7 EELQALAASRTQFYQQANENGMVKQELDLLEDDAKVFKLIGPVLMKQDLEESRQNVAKRLELIEREM 207
+E+Q LA R + QQANEN MVK+ELDLL+D+AKV+KL+GPVL+KQD +E++ NV KRLE I E+
Sbjct: 20 DEVQVLATQRQTYAQQANENDMVKKELDLLDDEAKVYKLVGPVLLKQDADEAKSNVNKRLEFINNEL 86
BLAST of mRNA_S-dermatodea_contig13324.1969.1 vs. uniprot
Match: H3GRS3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GRS3_PHYRM) HSP 1 Score: 82.4 bits (202), Expect = 1.300e-18 Identity = 40/67 (59.70%), Postives = 55/67 (82.09%), Query Frame = 1
Query: 7 EELQALAASRTQFYQQANENGMVKQELDLLEDDAKVFKLIGPVLMKQDLEESRQNVAKRLELIEREM 207
+E+Q LA+ R + QQANENGMVK EL+LL+D+A+V+KL+GPVL+KQD +E++ NV KRLE I E+
Sbjct: 20 DEVQVLASQRQTYAQQANENGMVKTELELLDDEARVYKLVGPVLLKQDADEAKTNVNKRLEFINNEL 86 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13324.1969.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig13324.1969.1 >prot_S-dermatodea_contig13324.1969.1 ID=prot_S-dermatodea_contig13324.1969.1|Name=mRNA_S-dermatodea_contig13324.1969.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=70bp CLEELQALAASRTQFYQQANENGMVKQELDLLEDDAKVFKLIGPVLMKQDback to top mRNA from alignment at S-dermatodea_contig13324:6000..6521- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig13324.1969.1 ID=mRNA_S-dermatodea_contig13324.1969.1|Name=mRNA_S-dermatodea_contig13324.1969.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=522bp|location=Sequence derived from alignment at S-dermatodea_contig13324:6000..6521- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig13324:6000..6521- >mRNA_S-dermatodea_contig13324.1969.1 ID=mRNA_S-dermatodea_contig13324.1969.1|Name=mRNA_S-dermatodea_contig13324.1969.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=420bp|location=Sequence derived from alignment at S-dermatodea_contig13324:6000..6521- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |