mRNA_S-dermatodea_contig13307.1965.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig13307.1965.1 vs. uniprot
Match: D7FZ48_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ48_ECTSI) HSP 1 Score: 306 bits (785), Expect = 2.800e-97 Identity = 152/225 (67.56%), Postives = 169/225 (75.11%), Query Frame = 3
Query: 60 SKWTAQEVLPMEKVVIEPSRKECDFEGRPSVGNN---SHPQASSTPSAQSHLVFTGLERTGLDLRSLHVTAHFGVDSVHKVGKVTSPIQVGANGRTYAAVFYPSMQEIWPELYSTSNIRVVEVDVVVEIGSDFGEYQYVGPHLKVTYLRSPHSTDDNDQAPPTSGRRTGSRPAVGSFDEAPHVSYSCVDYSCGDWLAEMCHSMFRPGANAHQPLHGDPEDVMSVD 725
+KW LPMEKVVIEPSR ECDFEGRP+ + P S+ Q HLVFTGL TG DLRSL VTAHFGVDSVHKVGKVTSPIQ+G+NGR YA VFYPSMQEIWPELYSTSNIRVVEVD+VVEI SD GEYQYVGP LKVTYLR+ D + P +GRRT SR + + VSYSCVDYSCGDW ++MC S+FR GA AHQPLH DP D+M+VD
Sbjct: 362 AKWANDGHLPMEKVVIEPSRNECDFEGRPTPPTDPKSGEPPIPSSTDRQCHLVFTGLNNTGQDLRSLRVTAHFGVDSVHKVGKVTSPIQLGSNGRAYAGVFYPSMQEIWPELYSTSNIRVVEVDLVVEIRSDSGEYQYVGPQLKVTYLRAAPPADAAEATPRPAGRRTASRAPIPFNSDGHQVSYSCVDYSCGDWFSDMCQSVFRSGATAHQPLHDDPNDLMNVD 586
BLAST of mRNA_S-dermatodea_contig13307.1965.1 vs. uniprot
Match: D7G7N5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N5_ECTSI) HSP 1 Score: 189 bits (481), Expect = 1.100e-54 Identity = 105/182 (57.69%), Postives = 131/182 (71.98%), Query Frame = 3
Query: 57 QSKWTAQEV-----LPMEKVVIEPSRKECDFEGRP--SVGNNSHPQASSTPSA-QSHLVFTGLERTGLDLRSLHVTAHFGVDSVHKVGKVTSPIQVGANGRTYAAVFYPSMQEIWPELYSTSNIRVVEVDVVVEIGSDF-GEYQYVGPHLKVTYLRS-PHSTDDNDQAPPTSGRRTGSRPAV 572
+S W A+ V LPM VV+E SRKECD EGRP +GN+ P +S+P +SH+ FTGLE+TG DLR L VTA FGVD+VH++ VTSPI+VG +GR Y+ VFYP MQEIWPELY+TSNIR+VEVDV +EI SD GE+++VGPHLKV Y R+ P D D +P +GR+T R AV
Sbjct: 88 ESSWDAELVGDFGRLPMGDVVVEVSRKECDLEGRPITRIGNSLTPITASSPDVRESHIEFTGLEKTGHDLRGLRVTAIFGVDAVHQIACVTSPIEVGPDGRAYSRVFYPGMQEIWPELYNTSNIRLVEVDVAIEILSDTCGEFRFVGPHLKVAYRRAIPPVDDGGDVSPRPTGRQTARRVAV 269
BLAST of mRNA_S-dermatodea_contig13307.1965.1 vs. uniprot
Match: D7G7N4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N4_ECTSI) HSP 1 Score: 158 bits (399), Expect = 2.200e-44 Identity = 83/138 (60.14%), Postives = 102/138 (73.91%), Query Frame = 3
Query: 84 LPMEKVVIEPSRKECDFEGRPSVGNNSHPQASSTPSAQ---SHLVFTGLERTGLDLRSLHVTAHFGVDSVHKVGKVTSPIQVGANGRTYAAVFYPSMQEIWPELYSTSNIRVVEVDVVVEIGSDFG-EYQYVGPHLKV 485
LP+E VV+ +RKECDFEGRP G S SST S+ +H+VFTGL TG D R L VT FGVD+VH++ VTSPIQV A+GR Y+ VFYPS++E+WPELY T ++R VEVDV VE+ SD G E++YVGPHLKV
Sbjct: 42 LPIEGVVVALARKECDFEGRPLPGGGSGMTPSSTVSSNGRDTHVVFTGLNDTGHDPRGLRVTVIFGVDAVHQIACVTSPIQVAADGRAYSRVFYPSLEEVWPELYYTVDVRAVEVDVAVEVLSDDGREFRYVGPHLKV 179
BLAST of mRNA_S-dermatodea_contig13307.1965.1 vs. uniprot
Match: A0A6H5JDQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDQ6_9PHAE) HSP 1 Score: 161 bits (408), Expect = 5.140e-43 Identity = 84/142 (59.15%), Postives = 104/142 (73.24%), Query Frame = 3
Query: 84 LPMEKVVIEPSRKECDFEGRPSVGNNSHPQASSTPSAQ---SHLVFTGLERTGLDLRSLHVTAHFGVDSVHKVGKVTSPIQVGANGRTYAAVFYPSMQEIWPELYSTSNIRVVEVDVVVEIGSDFG-EYQYVGPHLKVTYLR 497
LP+E VV+ +RKECDFEGRP G S SST S+ +H+VFTGL TG D R L VT FGVD+VH++ VTSP+QV A+GR Y+ VFYPS++++WPELY T ++R VEVDV VEI SD G E++YVGPHLKV Y R
Sbjct: 220 LPIEGVVVALARKECDFEGRPLPGGGSGMTPSSTVSSNGRDTHVVFTGLHNTGHDPRGLRVTVIFGVDAVHQIACVTSPVQVAADGRAYSRVFYPSLEDVWPELYYTVDVRAVEVDVAVEILSDDGREFRYVGPHLKVGYTR 361
BLAST of mRNA_S-dermatodea_contig13307.1965.1 vs. uniprot
Match: A0A6H5JMY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMY9_9PHAE) HSP 1 Score: 136 bits (342), Expect = 2.760e-35 Identity = 78/137 (56.93%), Postives = 95/137 (69.34%), Query Frame = 3
Query: 30 GGQPPQESAQSKWTAQEV-----LPMEKVVIEPSRKECDFEGRP--SVGNNSHP-QASSTPSAQSHLVFTGLERTGLDLRSLHVTAHFGVDSVHKVGKVTSPIQVGANGRTYAAVFYPSMQEIWPELYSTSNIRVVE 416
GG + + W A+ V LPM VV+E SRKECD EGRP +GN+ P ASST +S + FTGLE+TG DLR L VTA FGVD+VH++ VTSPI+VG +GR + VFYP MQEIWPELY+TSNIR+VE
Sbjct: 83 GGDSLSSTPECSWDAELVGDCGRLPMGDVVVEVSRKECDLEGRPIARIGNSLTPITASSTDVRESLIEFTGLEKTGHDLRGLCVTAIFGVDAVHQIACVTSPIEVGPSGRACSRVFYPGMQEIWPELYNTSNIRLVE 219
BLAST of mRNA_S-dermatodea_contig13307.1965.1 vs. uniprot
Match: D7G6J1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J1_ECTSI) HSP 1 Score: 100 bits (250), Expect = 1.250e-22 Identity = 57/140 (40.71%), Postives = 74/140 (52.86%), Query Frame = 3
Query: 126 CDFEGRPSVGNNSHPQASSTPSA----------QSHLVFTGLERTGLDLRSLHVTAHFGVDSVHKVGKVTSPIQVGANGRTYAAVFYPSMQEIWPELYSTSNIRVVEVDVVVEIGSDFGEYQYVGPHLKVTYLRSPHSTD 515
CDF GR HPQ S PSA + HLVFTGL G L L T +F ++S + + P+QVG + R Y AV YP+M E+WPE+Y + VV+VDV + + S +Y G LKVTY R+ S D
Sbjct: 6 CDFHGRAVA----HPQESVVPSALAACFMSGSLEQHLVFTGLVGAGPHLDYLTTTVYFSINSGRPLARAAGPMQVGEDERVYVAVKYPTMNELWPEIYQNVAVEVVQVDVFITVRSGHKTIRYPGTELKVTYRRTRMSPD 141
BLAST of mRNA_S-dermatodea_contig13307.1965.1 vs. uniprot
Match: D8LCL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL1_ECTSI) HSP 1 Score: 102 bits (253), Expect = 2.750e-21 Identity = 57/137 (41.61%), Postives = 79/137 (57.66%), Query Frame = 3
Query: 111 PSRKECDFEGRPSVGNNSHPQ----ASSTPSA--QSHLVFTGLERTGLDLRSLHVTAHFGVDSVHKVGKVTSPIQVGANGRTYAAVFYPSMQEIWPELYSTSNIRVVEVDVVVEIGSDFGEYQYVGPHLKVTYLRSP 503
P ++ DFEGR N A S P + + HLVF GL TG L +L A F + K ++ P+Q G+NGR Y AV YPSM E+WPE+Y+++ IRVV+VD++VE+ S +G+ Y+ LK Y R P
Sbjct: 204 PVVEDFDFEGRTIEPNKPSDSPFAAAFSVPRSDDEQHLVFIGLGETGRPLPTLAARAQFSANPGRKAERMVGPLQAGSNGRVYGAVQYPSMAELWPEVYNSTAIRVVKVDMLVEVRSRYGDSLYLATELKAMYRRPP 340
BLAST of mRNA_S-dermatodea_contig13307.1965.1 vs. uniprot
Match: D8LCJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ7_ECTSI) HSP 1 Score: 103 bits (256), Expect = 5.610e-21 Identity = 60/141 (42.55%), Postives = 82/141 (58.16%), Query Frame = 3
Query: 99 VVIEPSRKECDFEGRPSVGNN---SHPQAS--STPSAQS--HLVFTGLERTGLDLRSLHVTAHFGVDSVHKVGKVTSPIQVGANGRTYAAVFYPSMQEIWPELYSTSNIRVVEVDVVVEIGSDFGEYQYVGPHLKVTYLRS 500
+ +E R+E DF+GR +N P AS S P + +L FTGL TG LR L F V+S V P+Q G NGR Y A+ YPSM E+WPE+ STS +RVV+VD +V+I S G++ ++G KVTY ++
Sbjct: 466 IAVESLREEFDFDGRSYQPDNPPKDSPFASVFSVPCSDEAQYLAFTGLGHTGQPLRMLTARVQFSVNSERTAESVVGPLQAGGNGRVYGALRYPSMSELWPEICSTSAVRVVQVDTLVDIRSRQGDFLFLGNGPKVTYRQA 606
BLAST of mRNA_S-dermatodea_contig13307.1965.1 vs. uniprot
Match: A0A6H5JZ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ42_9PHAE) HSP 1 Score: 92.4 bits (228), Expect = 1.640e-17 Identity = 56/144 (38.89%), Postives = 81/144 (56.25%), Query Frame = 3
Query: 90 MEKVVIEPSRKECDFEGRPSVGN----NSHPQASSTPSA--QSHLVFTGLERTGLDLRSLHVTAHFGVDSVHKVGKVTSPIQV--GANGRTYAAVFYPSMQEIWPELYSTSNIRVVEVDVVVEIGSDFGEYQYVGPHLKVTYLR 497
++ V IE R++ DFEGR N + A S P + + +LVF GL TG L +L A F + + ++ P+Q G+NGR Y AV YPSM E+WPE+Y++ IRVV+VD++VE+ S G+ Y+ L Y R
Sbjct: 279 VDNVFIESLREDFDFEGRTIEPNKPSGSPFAAALSVPRSDDEQYLVFIGLGETGRPLPALAARAQFSANPGRQAERMVGPLQARAGSNGRVYGAVQYPSMAELWPEVYNSKAIRVVKVDMLVEVRSRSGDSLYLATELMAMYRR 422
BLAST of mRNA_S-dermatodea_contig13307.1965.1 vs. uniprot
Match: A0A6H5L3B8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3B8_9PHAE) HSP 1 Score: 77.0 bits (188), Expect = 7.210e-14 Identity = 43/108 (39.81%), Postives = 57/108 (52.78%), Query Frame = 3
Query: 126 CDFEGRPSVGNNSHPQASSTPSA----------QSHLVFTGLERTGLDLRSLHVTAHFGVDSVHKVGKVTSPIQVGANGRTYAAVFYPSMQEIWPELYSTSNIRVVEV 419
CDF GR HPQ S SA + HLVFTGL G DL L T +F ++S + + P+QVG + R Y AV +P+M E+WPE+Y + VV+V
Sbjct: 15 CDFHGRAVA----HPQESVDSSALAACFMSGSLEQHLVFTGLVGAGPDLDYLTTTVYFSINSGRPLARAAGPMQVGEDERVYVAVKFPTMNELWPEIYQNVAVEVVQV 118 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13307.1965.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig13307.1965.1 >prot_S-dermatodea_contig13307.1965.1 ID=prot_S-dermatodea_contig13307.1965.1|Name=mRNA_S-dermatodea_contig13307.1965.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=214bp MEKVVIEPSRKECDFEGRPSVGNNSHPQASSTPSAQSHLVFTGLERTGLDback to top mRNA from alignment at S-dermatodea_contig13307:1976..3947- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig13307.1965.1 ID=mRNA_S-dermatodea_contig13307.1965.1|Name=mRNA_S-dermatodea_contig13307.1965.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1972bp|location=Sequence derived from alignment at S-dermatodea_contig13307:1976..3947- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig13307:1976..3947- >mRNA_S-dermatodea_contig13307.1965.1 ID=mRNA_S-dermatodea_contig13307.1965.1|Name=mRNA_S-dermatodea_contig13307.1965.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1284bp|location=Sequence derived from alignment at S-dermatodea_contig13307:1976..3947- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |