mRNA_S-dermatodea_contig13251.1934.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig13251.1934.1 vs. uniprot
Match: A0A6H5L2L5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2L5_9PHAE) HSP 1 Score: 360 bits (925), Expect = 9.360e-124 Identity = 178/197 (90.36%), Postives = 188/197 (95.43%), Query Frame = 1
Query: 1 RLPTVYYRLSQALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQQYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRASNVVEVLQRKRGLLTDADVQTCKGGMNTWGYVGDLNDQPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAAKKSAGSEPANGPRVMSGTVPTVVTERSKM 591
++P + LS+AL+AGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQ YGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLR+SNVVEVLQRKRGLLT+ DV+ CKGGMNTWGYVGDLND PQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAAKKSAGSEPANGPRVMSGTV TVVT+R+KM
Sbjct: 114 KVPLLPTTLSKALIAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRSSNVVEVLQRKRGLLTNEDVEKCKGGMNTWGYVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAAKKSAGSEPANGPRVMSGTVQTVVTDRAKM 310
BLAST of mRNA_S-dermatodea_contig13251.1934.1 vs. uniprot
Match: A0A836CMQ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMQ9_9STRA) HSP 1 Score: 269 bits (687), Expect = 1.010e-87 Identity = 133/179 (74.30%), Postives = 155/179 (86.59%), Query Frame = 1
Query: 22 RLSQALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQQYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRASNVVEVLQRKRGLLTDADVQTCKGGMNTWGYVGDLNDQPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAA-----AAKKSAGSEPANGPR 543
++ +AL+AG+FVLGIGTGVTVDSAINT+P+DLASRDAIDRNAPNP ICQ YGSSAMVVD+RVFVTFNPFS++V+QAD KPGCVLR SN V+VL+R R L+ DA+V+TCKGGMNTW +VGDLN +PQLSCVYQSDDAQNEF+S+PK GLGEDVYDDDRAA AA+ A S GP+
Sbjct: 112 KIPKALLAGIFVLGIGTGVTVDSAINTNPKDLASRDAIDRNAPNPGICQTYGSSAMVVDERVFVTFNPFSIYVAQADVKPGCVLRQSNFVQVLKR-RNLINDAEVETCKGGMNTWAFVGDLNGKPQLSCVYQSDDAQNEFVSDPKIGLGEDVYDDDRAAEQAARAARAVAASATKPGPQ 289
BLAST of mRNA_S-dermatodea_contig13251.1934.1 vs. uniprot
Match: A0A7R9WGK2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WGK2_9STRA) HSP 1 Score: 247 bits (631), Expect = 1.590e-80 Identity = 120/172 (69.77%), Postives = 146/172 (84.88%), Query Frame = 1
Query: 1 RLPTVYYRLSQALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQQYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRASNVVEVLQRKRGLLTDADVQTCKGGMNTWGYVGDLNDQPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAAKKSA 516
RLP +S+AL+AG+FVLGIGTGVT++S INT P+DLASRDAIDRNAPNP +C QYG+SAM DQRVFV+FNPF+++V+QAD KP CVLR SNVV+VL R+R L+ D +V+TCK +NTW +VGDL++ PQLSCVYQSDDAQNEFLSNPK G+GEDVYDDDRA+ +K A
Sbjct: 15 RLPE---SVSKALLAGIFVLGIGTGVTIESQINTSPKDLASRDAIDRNAPNPTLCAQYGASAMAFDQRVFVSFNPFNVYVAQADVKPACVLRQSNVVQVL-RERKLINDNEVRTCKQKVNTWAFVGDLDNMPQLSCVYQSDDAQNEFLSNPKLGIGEDVYDDDRASLERKRA 182
BLAST of mRNA_S-dermatodea_contig13251.1934.1 vs. uniprot
Match: A0A7S2UF23_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UF23_9STRA) HSP 1 Score: 245 bits (626), Expect = 2.160e-78 Identity = 118/170 (69.41%), Postives = 144/170 (84.71%), Query Frame = 1
Query: 1 RLPTVYYRLSQALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQQYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRASNVVEVLQRKRGLLTDADVQTCKGGMNTWGYVGDLNDQPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAAKK 510
RLP +S++L+AG+FVLGIGTGVTVDSAINT+ RDLASRDAIDRNAPNP +C YG+SAM DQRVFV+FNPF+++V+QAD KP CVLR +N+V +L R+R ++ DA+V++CK MNTW YVGDL+D PQLSCVYQS+DAQNEFLSNPK G+GEDV+DDDRA A K
Sbjct: 116 RLPD---SVSKSLLAGIFVLGIGTGVTVDSAINTNERDLASRDAIDRNAPNPELCSTYGASAMAFDQRVFVSFNPFAVYVAQADVKPACVLRPANIVPIL-RERNMINDAEVRSCKKNMNTWAYVGDLDDMPQLSCVYQSEDAQNEFLSNPKLGIGEDVWDDDRAKATGK 281
BLAST of mRNA_S-dermatodea_contig13251.1934.1 vs. uniprot
Match: A0A7S2SJB4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJB4_9STRA) HSP 1 Score: 241 bits (614), Expect = 2.570e-77 Identity = 117/164 (71.34%), Postives = 140/164 (85.37%), Query Frame = 1
Query: 22 RLSQALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQQYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRASNVVEVLQRKRGLLTDADVQTCKGGMNTWGYVGDLNDQPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAAKKS 513
+L+ L+AGVFVLGIGTGVTVDSAINT+P+DLASRDAIDR APN +CQQYG+SAMV+DQR+FVTFNPF+++V+QADTKPGCVLR+SNVV VLQ K GLL ++ CK MNTWG+VG L+D+PQLSCVY+S DAQNEFLSNPK GLGED+YD+ A K +
Sbjct: 86 QLTNYLLAGVFVLGIGTGVTVDSAINTNPKDLASRDAIDRAAPNAELCQQYGASAMVMDQRLFVTFNPFNVYVTQADTKPGCVLRSSNVVPVLQGK-GLLDRDEIAACKNNMNTWGFVGTLDDRPQLSCVYKSQDAQNEFLSNPKIGLGEDIYDNGIPGAGKNA 248
BLAST of mRNA_S-dermatodea_contig13251.1934.1 vs. uniprot
Match: A0A7S3PTW4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PTW4_9STRA) HSP 1 Score: 243 bits (619), Expect = 3.170e-77 Identity = 122/181 (67.40%), Postives = 147/181 (81.22%), Query Frame = 1
Query: 1 RLPTVYYRLSQALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQQYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRASNVVEVLQRKRGLLTDADVQTCKGGMNTWGYVGDLNDQPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAA--AAKKSAGSEPANG 537
RLP +S AL+AGVFVLGIGTGVTVDS INT P+DLASRDA+D+ APNP +C YG+SAM DQRVFV+FNPF+++V+QAD KP CVLRASNVV VLQ RGL+ +V++CK MNTW +VGDLND PQLSCVY+S+DAQNEFLS+PKYG+GEDV+DDDR A AA+K + + NG
Sbjct: 110 RLPE---SVSTALLAGVFVLGIGTGVTVDSQINTSPKDLASRDAVDQAAPNPRLCSTYGASAMAFDQRVFVSFNPFNVYVAQADVKPACVLRASNVVPVLQ-DRGLINGKEVRSCKQNMNTWAFVGDLNDYPQLSCVYRSEDAQNEFLSDPKYGIGEDVWDDDRVAIEAARKGSVKKVKNG 286
BLAST of mRNA_S-dermatodea_contig13251.1934.1 vs. uniprot
Match: A0A7S4I7G3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I7G3_9STRA) HSP 1 Score: 240 bits (613), Expect = 2.200e-76 Identity = 117/180 (65.00%), Postives = 147/180 (81.67%), Query Frame = 1
Query: 1 RLPTVYYRLSQALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQQYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRASNVVEVLQRKRGLLTDADVQTCKGGMNTWGYVGDLNDQPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAA-KKSAGSEPANG 537
RLP +S+AL+AG+FVLGIG GV ++S +NT P+DLASRDAID+NAPNP +C QYG+SAM DQRVFV+FNPF+++V+QAD KP CVLR SNVV+VL ++R L+ D +V++CK +NTW +VGDL+ PQ+SCVYQSDDAQNEFLSNPK G+GEDVYDDDRAA KKS G + +G
Sbjct: 116 RLPD---SVSKALLAGIFVLGIGAGVAIESQVNTSPKDLASRDAIDKNAPNPTLCAQYGASAMAFDQRVFVSFNPFNVYVAQADVKPACVLRQSNVVQVL-KERNLINDNEVRSCKQKVNTWAFVGDLDSMPQISCVYQSDDAQNEFLSNPKLGIGEDVYDDDRAALERKKSTGKQIKSG 291
BLAST of mRNA_S-dermatodea_contig13251.1934.1 vs. uniprot
Match: A0A7S4WJP8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4WJP8_9STRA) HSP 1 Score: 239 bits (610), Expect = 6.650e-76 Identity = 114/172 (66.28%), Postives = 142/172 (82.56%), Query Frame = 1
Query: 1 RLPTVYYRLSQALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQQYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRASNVVEVLQRKRGLLTDADVQTCKGGMNTWGYVGDLNDQPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAAKKSA 516
RLP +S+AL+AGVFVLGIGTGVT+DS INT+P+DLASRDA+DRNAPNP +C YG+ AM DQRVFV+FNPF+++V+QAD KP CVLR +NVV +L R++ L+ DA+V++CK MNTW +VGDL D PQLSCVY+S+DAQNEFLSNPK G+GEDV+DDDR K +A
Sbjct: 122 RLPA---SVSKALLAGVFVLGIGTGVTIDSQINTNPKDLASRDAVDRNAPNPELCTTYGAPAMAFDQRVFVSFNPFNVYVAQADVKPACVLRPANVVPIL-REKNLINDAEVRSCKQNMNTWAFVGDLQDMPQLSCVYKSEDAQNEFLSNPKLGIGEDVWDDDREKMMKNAA 289
BLAST of mRNA_S-dermatodea_contig13251.1934.1 vs. uniprot
Match: W7TER9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TER9_9STRA) HSP 1 Score: 235 bits (599), Expect = 8.870e-75 Identity = 111/154 (72.08%), Postives = 132/154 (85.71%), Query Frame = 1
Query: 25 LSQALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQQYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRASNVVEVLQRKRGLLTDADVQTCKGGMNTWGYVGDLNDQPQLSCVYQSDDAQNEFLS-NPKYGLGEDVYD 483
LS AL+ G FVLG+GTGVTVDSA+NT+ +DLASRDAID+NAPNP CQ+YG+S +V+D R+FV+FNPF ++V+QAD KPGCVLRA+NVV+ LQ RGLLTD +V CK G NTW YVGD+ND+PQLSCVYQSDDAQNEFL NPK G+GEDVYD
Sbjct: 119 LSAALLLGTFVLGVGTGVTVDSAVNTNKKDLASRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCVLRAANVVQALQG-RGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSDDAQNEFLEKNPKLGVGEDVYD 271
BLAST of mRNA_S-dermatodea_contig13251.1934.1 vs. uniprot
Match: A0A7R9WZG6_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WZG6_9STRA) HSP 1 Score: 231 bits (588), Expect = 1.400e-73 Identity = 112/165 (67.88%), Postives = 137/165 (83.03%), Query Frame = 1
Query: 1 RLPTVYYRLSQALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQQYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRASNVVEVLQRKRGLLTDADVQTCKGGMNTWGYVGDLNDQPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRA 495
RLP +SQA++AGVFVLGIG GVT+DSAINT+PRDLASRDAID+ APN ++C YG+SAM DQRVFV+FNPF+++V+QAD KP CVLR SNVV +L ++R L+ D +V++CK MNTW +VG+L D PQLSCVY+S DAQNEFLSNPKYG+GED DDDRA
Sbjct: 46 RLPA---SVSQAVLAGVFVLGIGLGVTIDSAINTNPRDLASRDAIDQAAPNSSLCANYGASAMAFDQRVFVSFNPFNVYVAQADVKPACVLRPSNVVPIL-KQRNLINDDEVRSCKANMNTWAFVGNLGDAPQLSCVYKSADAQNEFLSNPKYGIGEDYLDDDRA 206 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13251.1934.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig13251.1934.1 >prot_S-dermatodea_contig13251.1934.1 ID=prot_S-dermatodea_contig13251.1934.1|Name=mRNA_S-dermatodea_contig13251.1934.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=198bp RLPTVYYRLSQALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPback to top mRNA from alignment at S-dermatodea_contig13251:298..1768+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig13251.1934.1 ID=mRNA_S-dermatodea_contig13251.1934.1|Name=mRNA_S-dermatodea_contig13251.1934.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1471bp|location=Sequence derived from alignment at S-dermatodea_contig13251:298..1768+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig13251:298..1768+ >mRNA_S-dermatodea_contig13251.1934.1 ID=mRNA_S-dermatodea_contig13251.1934.1|Name=mRNA_S-dermatodea_contig13251.1934.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1188bp|location=Sequence derived from alignment at S-dermatodea_contig13251:298..1768+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |