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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 903 |
| Cds size | 504 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622924278.799273-UTR-S-dermatodea_contig13223:2692..3089 | 1622924278.799273-UTR-S-dermatodea_contig13223:2692..3089 | Saccorhiza dermatodea SderLu1190fm monoicous | UTR | S-dermatodea_contig13223 2693..3089 + |
| 1694079146.1140633-UTR-S-dermatodea_contig13223:2692..3089 | 1694079146.1140633-UTR-S-dermatodea_contig13223:2692..3089 | Saccorhiza dermatodea SderLu1190fm monoicous | UTR | S-dermatodea_contig13223 2693..3089 + |
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig13223.1920.1 >prot_S-dermatodea_contig13223.1920.1 ID=prot_S-dermatodea_contig13223.1920.1|Name=mRNA_S-dermatodea_contig13223.1920.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=168bp
MPSAGDDEVSGAVAALMVLHSSSRPSAVPPQAALLSDAPVSSTYSQPNPW
LPSSVPPTPASSRPPRGTMAEIRPYPYPFYPPHGVSGPYCESGSVRAEHL
GFSDPSRAAARRNNFSRGPGSWVRIMKDPRPAIRRSTDPRPVMPAFAGGS
VEEWTAHGGGRSSSGGSA back to topmRNA from alignment at S-dermatodea_contig13223:2693..4111+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig13223.1920.1 ID=mRNA_S-dermatodea_contig13223.1920.1|Name=mRNA_S-dermatodea_contig13223.1920.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1419bp|location=Sequence derived from alignment at S-dermatodea_contig13223:2693..4111+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CTCTGGGCACTACAGGCAAAACTCAGCAGCACATCGGTATCATACGCATC
ACCAGAAAGCGCTGCGGGTTAGTGGACAGCGAGGGAGAGAAGAGGGAGGC
CAGGCCGCACACACACACGCACATCCCAGAGGACCCAACCAGGCCATCTG
CAGCGAGCGCGAAGCGGCTGATCTCGGTCGAGACTACGCGAGAACTTCAG
ACACCCACAGAAGAGCTGCGGGTCCTTCGCCCACCCTTCCACCCGAGAGA
AGATTCGGTTGGCCACACAGCAAGCGGTAGGCAACCAGTCTCTCTTCTAG
ACTGACTGCTTGTTCTGCTGCTCTCCTCTGTTTGCTGTTCTTGCGAGCTT
TTTGTCTGGATTCACCATCAAATAACAAAATCTGAACGACACGCGACATG
CCGAGCGCTGGCGACGACGAAGTGAGCGGGGCCGTGGCGGCGCTGATGGT
TCTCCACTCGAGCAGCAGGTAGGTGCGGGCGTGGGCAACGCGGATGTTTT
TCGCGCTGGCTCGGTGACTCAGAATTTCGGATGATAAAAACAAACGCGGT
TGAGTCGGTTTGTATGTATTATATTATGTATGATATCATACAAACAAGTT
GTAAAGTACCTGGTAAGCAGTATCATAGATCTATTTACGTTGTAGCATCG
GATCGTTTGTTCGCGCTGACCACATTTATTTGATTTTTTTTCGTTCAGAG
TCTCGAGTTGTTCTCTTTGTGGACACCCTATCTATCATTACTCTGTACAA
GTGTTGAAATTCCATCCTTTGCAGAACAGCAACGACTTGGGTCGTCGCCG
CTGAGAATTGCTCCACAGAAGCGGGTACACACAAAAAGTACACAACAACA
GTCAGCAGCTACAGTATCGCGTCCCTGGCAAGTCGATGCCGAGTCAGAAG
CGACCCCCGCACTCTGAAGGAGTCTCGCGCGGCCGATCCCAACGCCGAAC
CTCCTCCTCGCCCCGCGTTCCCACTCAATCCGACAGGCCCTCCGCGGTTC
CCCCACAGGCTGCACTCCTCAGCGACGCCCCGGTTTCATCAACCTACTCC
CAGCCCAACCCGTGGTTACCATCCTCCGTCCCTCCAACGCCGGCATCGAG
TCGACCGCCGCGCGGCACCATGGCCGAGATTCGCCCGTACCCGTACCCTT
TCTACCCGCCGCACGGCGTGTCCGGCCCCTACTGCGAGAGCGGTTCCGTC
AGGGCGGAGCACCTAGGATTCAGTGACCCATCGAGAGCGGCGGCGCGGCG
CAATAACTTCTCGAGGGGTCCTGGAAGCTGGGTACGAATTATGAAGGATC
CGCGGCCAGCTATACGACGCTCGACGGATCCTCGGCCAGTCATGCCGGCG
TTTGCGGGCGGATCGGTGGAAGAGTGGACTGCGCACGGCGGCGGCAGAAG
CAGCAGCGGTGGCAGCGCC back to topCoding sequence (CDS) from alignment at S-dermatodea_contig13223:2693..4111+ >mRNA_S-dermatodea_contig13223.1920.1 ID=mRNA_S-dermatodea_contig13223.1920.1|Name=mRNA_S-dermatodea_contig13223.1920.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1008bp|location=Sequence derived from alignment at S-dermatodea_contig13223:2693..4111+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCCGAGCGCTGGCGACGACGAAGTGAGCGGGGCCGTGGCGGCGCTGAT
GGTTCTCCACTCGAGCAGCAGATGCCGAGCGCTGGCGACGACGAAGTGAG
CGGGGCCGTGGCGGCGCTGATGGTTCTCCACTCGAGCAGCAGGCCCTCCG
CGGTTCCCCCACAGGCTGCACTCCTCAGCGACGCCCCGGTTTCATCAACC
TACTCCCAGCCCAACCCGTGGTTACCATCCTCCGTCCCTCCAACGCCGGC
ATCGAGTCGACCGCCGCGCGGCACCATGGCCGAGATTCGCCCGTACCCGT
ACCCTTTCTACCCGCCGCACGGCGTGTCCGGCCCCTACTGCGAGAGCGGT
TCCGTCAGGGCGGAGCACCTAGGATTCAGTGACCCATCGAGAGCGGCGGC
GCGGCGCAATAACTTCTCGAGGGGTCCTGGAAGCTGGGTACGAATTATGA
AGGATCCGCGGCCAGCTATACGACGCTCGACGGATCCTCGGCCAGTCATG
CCGGCGTTTGCGGGCGGATCGGTGGAAGAGTGGACTGCGCACGGCGGCGG
CAGAAGCAGCAGCGGTGGCAGCGCCGCCCTCCGCGGTTCCCCCACAGGCT
GCACTCCTCAGCGACGCCCCGGTTTCATCAACCTACTCCCAGCCCAACCC
GTGGTTACCATCCTCCGTCCCTCCAACGCCGGCATCGAGTCGACCGCCGC
GCGGCACCATGGCCGAGATTCGCCCGTACCCGTACCCTTTCTACCCGCCG
CACGGCGTGTCCGGCCCCTACTGCGAGAGCGGTTCCGTCAGGGCGGAGCA
CCTAGGATTCAGTGACCCATCGAGAGCGGCGGCGCGGCGCAATAACTTCT
CGAGGGGTCCTGGAAGCTGGGTACGAATTATGAAGGATCCGCGGCCAGCT
ATACGACGCTCGACGGATCCTCGGCCAGTCATGCCGGCGTTTGCGGGCGG
ATCGGTGGAAGAGTGGACTGCGCACGGCGGCGGCAGAAGCAGCAGCGGTG
GCAGCGCC back to top
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