mRNA_S-dermatodea_contig13168.1895.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig13168.1895.1 vs. uniprot
Match: A0A6H5KPS4_9PHAE (Glutathione peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPS4_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 2.630e-19 Identity = 36/48 (75.00%), Postives = 43/48 (89.58%), Query Frame = 1
Query: 10 QVNVNGLQSDPLFAWLKAASGNPVDIPWNFSKFLVVCGEVVRRYSHEV 153
+++VNGL S P+FAWLKAASGNP DIPWNF+KFLV+CG V+RYSHEV
Sbjct: 116 KIDVNGLHSSPIFAWLKAASGNPHDIPWNFTKFLVLCGSTVKRYSHEV 163
BLAST of mRNA_S-dermatodea_contig13168.1895.1 vs. uniprot
Match: D8LS13_ECTSI (Glutathione peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS13_ECTSI) HSP 1 Score: 72.8 bits (177), Expect = 1.930e-14 Identity = 35/48 (72.92%), Postives = 39/48 (81.25%), Query Frame = 1
Query: 10 QVNVNGLQSDPLFAWLKAASGNPVDIPWNFSKFLVVCGEVVRRYSHEV 153
+V VNGL+S PLFAWLKAASG P +I WNF+KFLVV G V RYSHEV
Sbjct: 101 KVEVNGLRSQPLFAWLKAASGVPGNIEWNFTKFLVVGGNHVTRYSHEV 148
BLAST of mRNA_S-dermatodea_contig13168.1895.1 vs. uniprot
Match: A0A7G2N1N5_LACSP (Glutathione peroxidase n=2 Tax=Lactococcus TaxID=1357 RepID=A0A7G2N1N5_LACSP) HSP 1 Score: 50.8 bits (120), Expect = 4.510e-6 Identity = 25/50 (50.00%), Postives = 37/50 (74.00%), Query Frame = 1
Query: 1 RFRQVNVNGLQSDPLFAWLKAASGNPV--DIPWNFSKFLV-VCGEVVRRY 141
+F +++VNG++ +PLF +LKAA + DI WNF+KFLV G+VV+RY
Sbjct: 91 QFAKIDVNGVEEEPLFTYLKAAQPGKLTSDIKWNFTKFLVDKTGQVVKRY 140
BLAST of mRNA_S-dermatodea_contig13168.1895.1 vs. uniprot
Match: UPI0009A7C027 (glutathione peroxidase n=1 Tax=Mesobacillus jeotgali TaxID=129985 RepID=UPI0009A7C027) HSP 1 Score: 50.4 bits (119), Expect = 6.420e-6 Identity = 27/66 (40.91%), Postives = 41/66 (62.12%), Query Frame = 1
Query: 4 FRQVNVNGLQSDPLFAWLKAASGNPV--DIPWNFSKFLVVC-GEVVRRYSHEVQCKAVYRKAKNAL 192
F +++VNG +DPLFA+LK G + DI WNF+KFL+ G+VV+RY+ + + + K L
Sbjct: 93 FAKIDVNGPNTDPLFAFLKEQKGGVLTKDIKWNFTKFLIDRNGQVVKRYAPTTEPEKIKNDIKELL 158
BLAST of mRNA_S-dermatodea_contig13168.1895.1 vs. uniprot
Match: A0A835YHD0_9STRA (Glutathione peroxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHD0_9STRA) HSP 1 Score: 50.1 bits (118), Expect = 1.530e-5 Identity = 28/61 (45.90%), Postives = 36/61 (59.02%), Query Frame = 1
Query: 10 QVNVNGLQSDPLFAWLKAASGNPVDIPWNFSKFLVVCGEVVRRYSHEVQCKAVYRKAKNAL 192
+V VNG DPLF +LK A+G+ + WNFSKFLVV G + YSH A+ +AL
Sbjct: 123 KVEVNGDGEDPLFTFLKEATGSG-PLKWNFSKFLVVNGVPRKHYSHSTSPSAIEDDIVDAL 182
BLAST of mRNA_S-dermatodea_contig13168.1895.1 vs. uniprot
Match: A0A139AAB0_GONPJ (Glutathione peroxidase n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AAB0_GONPJ) HSP 1 Score: 49.3 bits (116), Expect = 1.670e-5 Identity = 26/47 (55.32%), Postives = 34/47 (72.34%), Query Frame = 1
Query: 7 RQVNVNGLQSDPLFAWLKAASGNPVDIPWNFSKFLV-VCGEVVRRYS 144
+++ VNG +DPL+A+LKAA G DI WNF KFLV G+VV RY+
Sbjct: 93 KKIEVNGANTDPLYAFLKAAKGGG-DIKWNFEKFLVGKDGKVVDRYN 138
BLAST of mRNA_S-dermatodea_contig13168.1895.1 vs. uniprot
Match: UPI00119D3EB7 (glutathione peroxidase n=2 Tax=Bacillaceae TaxID=186817 RepID=UPI00119D3EB7) HSP 1 Score: 48.1 bits (113), Expect = 4.860e-5 Identity = 25/50 (50.00%), Postives = 35/50 (70.00%), Query Frame = 1
Query: 4 FRQVNVNGLQSDPLFAWLKAASGNPV--DIPWNFSKFLVVC-GEVVRRYS 144
+ +++VNG +DPLFA+LK G + DI WNF+KFLV G VV+RY+
Sbjct: 93 YAKIDVNGANTDPLFAFLKEQKGGVLTKDIKWNFTKFLVDRDGHVVKRYA 142
BLAST of mRNA_S-dermatodea_contig13168.1895.1 vs. uniprot
Match: A0A5J5KWD9_9MICC (Glutathione peroxidase n=1 Tax=Kocuria coralli TaxID=1461025 RepID=A0A5J5KWD9_9MICC) HSP 1 Score: 48.1 bits (113), Expect = 4.990e-5 Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 1
Query: 4 FRQVNVNGLQSDPLFAWLKAASG--NPVDIPWNFSKFLV-VCGEVVRRY 141
+++V+VNGL + PL+AWLK+ N DI WNF+KFLV G VV R+
Sbjct: 93 YKKVDVNGLHTHPLWAWLKSEKPGENGADIEWNFTKFLVDKSGTVVARF 141
BLAST of mRNA_S-dermatodea_contig13168.1895.1 vs. uniprot
Match: F7NW71_9GAMM (Glutathione peroxidase n=7 Tax=Chromatiaceae TaxID=1046 RepID=F7NW71_9GAMM) HSP 1 Score: 47.4 bits (111), Expect = 9.880e-5 Identity = 27/67 (40.30%), Postives = 41/67 (61.19%), Query Frame = 1
Query: 4 FRQVNVNGLQSDPLFAWLKAASGNPVD---IPWNFSKFLVVC-GEVVRRYSHEVQCKAVYRKAKNAL 192
F +V VNGL SDPLF +LK + + I WNF+KFLV G+VV+RY+ + ++++ + L
Sbjct: 93 FGKVQVNGLDSDPLFEYLKDQARGLMKTRAIKWNFTKFLVNREGDVVKRYAPRTKPSSLHQSVEEVL 159 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13168.1895.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig13168.1895.1 >prot_S-dermatodea_contig13168.1895.1 ID=prot_S-dermatodea_contig13168.1895.1|Name=mRNA_S-dermatodea_contig13168.1895.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=70bp RFRQVNVNGLQSDPLFAWLKAASGNPVDIPWNFSKFLVVCGEVVRRYSHEback to top mRNA from alignment at S-dermatodea_contig13168:3783..3992+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig13168.1895.1 ID=mRNA_S-dermatodea_contig13168.1895.1|Name=mRNA_S-dermatodea_contig13168.1895.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=210bp|location=Sequence derived from alignment at S-dermatodea_contig13168:3783..3992+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig13168:3783..3992+ >mRNA_S-dermatodea_contig13168.1895.1 ID=mRNA_S-dermatodea_contig13168.1895.1|Name=mRNA_S-dermatodea_contig13168.1895.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=420bp|location=Sequence derived from alignment at S-dermatodea_contig13168:3783..3992+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |