mRNA_S-dermatodea_contig12949.1792.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig12949.1792.1
Unique NamemRNA_S-dermatodea_contig12949.1792.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig12949.1792.1 vs. uniprot
Match: A0A6H5JJ68_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ68_9PHAE)

HSP 1 Score: 565 bits (1457), Expect = 4.050e-199
Identity = 296/384 (77.08%), Postives = 323/384 (84.11%), Query Frame = 1
Query:    1 MIYPTQHHGPFEKGNEAPGYDHSKEAVFKACGKTFKYAKTSLYVFDELNPIRVACVKTIAHPWFDRFILFLIILNSFVLALTDWSVIDDDPESDEVGEPIAEGSWRNELLFESEAVFTAFFTLEFVLKVIAQGFYLGRGSYLRDSWNILDFMVVITALMTNIPQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQIFAGKQHSRCRLTPYPVTSSFEIGMNHTAYRCLDVSNFDAIDQETSWTQSSSPWSTARDCWWPLDTEDERLCTYDTSSGKHKCEHDSRYMNESQFRWCGSDYDALGNIRFAGGVFDGVELSGSDIAANSTYVESLNWGYTTFDNIFVAFLSIFQSITMEGW 1152
            MIYPTQHHG FEKGNE PGYDHSKEAVFKACGKTFKYAKTSLYVFDELNP+RVACVKTIAHPWFDRFILFLI+LNSFVLALTDWSVIDDDP S +VGEPI +GSWRN LLFESEAVFTAFFTLEFVLKVIAQGFYLGRGSYLRDSWNILDFMVV+TALMT+IP MXXXXXXXXXXXXXXXXXXXXXXXX                                IQIFAGKQHSRCRLTP+PV +SFE+GMN+  YRCL VSNFD +D E SWTQS+SPW+T R+CWWP+D+EDERLCT ++ SGKHKCEHD RYMN S+FRWCGS+YDALGN RFAGG+ +GVE     +  N+T+V+SLNWGYT FDNIFVAFL+IFQSITMEGW
Sbjct:    1 MIYPTQHHGAFEKGNETPGYDHSKEAVFKACGKTFKYAKTSLYVFDELNPVRVACVKTIAHPWFDRFILFLIVLNSFVLALTDWSVIDDDPNSPDVGEPIDDGSWRNALLFESEAVFTAFFTLEFVLKVIAQGFYLGRGSYLRDSWNILDFMVVVTALMTSIPGMXXXXXXXXXXXXXXXXXXXXXXXXQKLVVGMLRSVPQLVSVVILLQFIFTVFGIFGIQIFAGKQHSRCRLTPFPVNNSFEVGMNYADYRCLSVSNFDVVDDEPSWTQSTSPWATPRECWWPIDSEDERLCTSNSGSGKHKCEHDERYMNLSEFRWCGSNYDALGNPRFAGGMIEGVEWGSGRLTDNATFVQSLNWGYTNFDNIFVAFLTIFQSITMEGW 384          
BLAST of mRNA_S-dermatodea_contig12949.1792.1 vs. uniprot
Match: D7FVE6_ECTSI (Voltage Gated Calcium/Sodium Channel subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE6_ECTSI)

HSP 1 Score: 566 bits (1460), Expect = 2.450e-183
Identity = 329/384 (85.68%), Postives = 356/384 (92.71%), Query Frame = 1
Query:    1 MIYPTQHHGPFEKGNEAPGYDHSKEAVFKACGKTFKYAKTSLYVFDELNPIRVACVKTIAHPWFDRFILFLIILNSFVLALTDWSVIDDDPESDEVGEPIAEGSWRNELLFESEAVFTAFFTLEFVLKVIAQGFYLGRGSYLRDSWNILDFMVVITALMTNIPQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQIFAGKQHSRCRLTPYPVTSSFEIGMNHTAYRCLDVSNFDAIDQETSWTQSSSPWSTARDCWWPLDTEDERLCTYDTSSGKHKCEHDSRYMNESQFRWCGSDYDALGNIRFAGGVFDGVELSGSDIAANSTYVESLNWGYTTFDNIFVAFLSIFQSITMEGW 1152
            MIYPTQHHG FEKGNE PGYDHSKEAVFKACGKTFKYAKTSLYVFDELNP+RVACVKTIAHPWFDRFILFLI+LNSFVLALTDWSVIDDDP S +VGEPI +GSWRN LLFESEAVFTAFFTLEFVLKVIAQGFYLGRGSYLRDSWNILDFMVV+TALMT+IP MXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQIFAGKQHSRCRLTP+PV +SFE+GMN+T YRCL VSNFD +D E SWTQS+SPW+T R+CWWP+D+E+ERLCT ++ SGKHKCEHD RYMN S+FRWCGS+YDALGN RFAGGV +GVE     +  N+T+V+SLNWGYT FDNIFVAFL+IFQSITMEGW
Sbjct:    1 MIYPTQHHGAFEKGNETPGYDHSKEAVFKACGKTFKYAKTSLYVFDELNPVRVACVKTIAHPWFDRFILFLIVLNSFVLALTDWSVIDDDPNSPDVGEPIDDGSWRNALLFESEAVFTAFFTLEFVLKVIAQGFYLGRGSYLRDSWNILDFMVVVTALMTSIPGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQIFAGKQHSRCRLTPFPVNNSFEVGMNYTDYRCLSVSNFDVVDDEPSWTQSTSPWATPRECWWPIDSENERLCTSNSGSGKHKCEHDDRYMNLSEFRWCGSNYDALGNPRFAGGVIEGVEWGAGRLTDNATFVQSLNWGYTNFDNIFVAFLTIFQSITMEGW 384          
BLAST of mRNA_S-dermatodea_contig12949.1792.1 vs. uniprot
Match: A0A6H5KPD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPD7_9PHAE)

HSP 1 Score: 430 bits (1105), Expect = 6.830e-135
Identity = 224/361 (62.05%), Postives = 270/361 (74.79%), Query Frame = 1
Query:   73 EAVFKACGKTFKYAKTSLYVFDELNPIRVACVKTIAHPWFDRFILFLIILNSFVLALTDWSVIDDDPESDEVGEPIAEGSWRNELLFESEAVFTAFFTLEFVLKVIAQGFYLGRGSYLRDSWNILDFMVVITALMTNIPQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQIFAGKQHSRCRLTPYPVTSSFEIGMNHTAYRCLDVSNFDAIDQETSWTQSSSPWSTARDCWWPLDTEDERLCTYDTSSGKHKCEHDSRYMNESQFRWCGSDYDALGNIRFAGGV-FDGVELSGSDIAANSTYVESLNWGYTTFDNIFVAFLSIFQSITMEGW 1152
            EAV+   GK   Y K+SLY+F E + +RVA VK +AHPWFDRFIL +I LNS VLALTDW+ ID+DP S+ VGEPIAEGSWRN LL+E+E++FTA FTLEFVLKV++QGF  G G+YLRD+WN+LDF+VV+TA++T+IP M       XXXXXXXXXXXXXXXXX                                IQ+FAGKQHSRCRLTPYPVT++FE GM++  +RCL+ SNFD +D++ SWTQSSSPWST +DCWWPLDT+D RLC +D S G H+CEHD  Y+NES FRWCGSDYDALGN RF GGV  +G    G ++  N+T+VE L WGYTTFDNIFVAFL+IFQSIT+EGW
Sbjct:   25 EAVYDFYGKHLVYPKSSLYLFSEKSRVRVAFVKLVAHPWFDRFILLVIALNSIVLALTDWTRIDEDPSSEHVGEPIAEGSWRNTLLYETESMFTAIFTLEFVLKVVSQGFIFGHGAYLRDAWNVLDFVVVVTAVLTSIPGMPTATAIRXXXXXXXXXXXXXXXXXQHLVVSMLKSVPQLVSVLILLQFIFVVFGILGIQLFAGKQHSRCRLTPYPVTTAFETGMDYADHRCLEASNFDVVDEDNSWTQSSSPWSTPQDCWWPLDTDDTRLCAFDDSPGNHQCEHDPAYLNESDFRWCGSDYDALGNRRFEGGVTLEGSPWGGWNLTDNATFVEDLAWGYTTFDNIFVAFLTIFQSITLEGW 385          
BLAST of mRNA_S-dermatodea_contig12949.1792.1 vs. uniprot
Match: D8LI94_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI94_ECTSI)

HSP 1 Score: 230 bits (587), Expect = 7.670e-71
Identity = 133/222 (59.91%), Postives = 159/222 (71.62%), Query Frame = 1
Query:   70 KEAVFKACGKTFKYAKTSLYVFDELNPIRVACVKTIAHPWFDRFILFLIILNSFVLALTDWSVIDDDPESDEVGEPIAEGSWRNELLFESEAVFTAFFTLEFVLKVIAQGFYLGRGSYLRDSWNILDFMVVITALMTNIPQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQIFAGKQHSRCRLTPYPVTSSFE 735
            KEAVF   GK   Y ++SLY+F E + +RVACVK +AHPWFDRFIL +I LNS VLALTDW+ ID+DP S++VGEPIAEGSWRN LL+E+E +FTA FTLEFVLKV++QGF  G G+YLRD+WN+LDF+VV+TAL+T+IP M        XXXXXXXXXXXXXXXX                                IQ+FAGKQHSRCRLTPYPVT++FE
Sbjct:    3 KEAVFDFHGKHLVYPRSSLYLFSEKSRVRVACVKLVAHPWFDRFILLVIALNSIVLALTDWTRIDEDPSSEDVGEPIAEGSWRNTLLYETEGIFTAIFTLEFVLKVVSQGFIFGHGAYLRDAWNVLDFVVVVTALLTSIPGMPTATAIRVXXXXXXXXXXXXXXXXQHLVVSMLKSVPQLVSVLILLQFIFVVFGILGIQLFAGKQHSRCRLTPYPVTTAFE 224          
BLAST of mRNA_S-dermatodea_contig12949.1792.1 vs. uniprot
Match: A0A7S1G9I4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G9I4_9STRA)

HSP 1 Score: 206 bits (524), Expect = 1.370e-57
Identity = 132/364 (36.26%), Postives = 176/364 (48.35%), Query Frame = 1
Query:   82 FKACGKTFKYAKTSLYVFDELNPIRVACVKTIAHPWFDRFILFLIILNSFVLALTDWSVIDDDPESDEVGEPIAEGSWRNELLFESEAVFTAFFTLEFVLKVIAQGFYLGRGSYLRDSWNILDFMVVITALMTNIPQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQIFAGKQHSRCRLTPYPVT---SSFEIGMNHTAYRCL----DVSNFDAIDQETSWTQSSSPWSTARDCWWPLDTEDERLCTYDTSSGKHKCEHDSRYMNESQFRWCGSDYDALGNIRFAGGVFDGVELSGSDIAANSTYVESLNWGYTTFDNIFVAFLSIFQSITMEGW 1152
            F A GK  +++  SLY+F   NPIR   V  I   +FDRFIL LII NS VLALTD+S +  D         ++  SWRN+++ E+E  FT  F  E  LK+IA GF++  GSYLRD WNI+DF+VV+T ++T +P M                                                        IQI+ G  H+RCR+TPYP+       E   +  +  C     D S ++            +PW+T  DC+WP+D  D  +C+  +  G H+C  D         RWCGS+YD  G  RF+         +G D A   T+V  LNWGYT FDN+F A L+IFQ ITMEGW
Sbjct:   15 FFAHGKARRFSPKSLYLFSTTNPIRKRIVWLIEWKYFDRFILMLIIANSIVLALTDYSSVLPDGT-------LSMSSWRNQVVEETEIYFTTLFAAECSLKIIAMGFFVDIGSYLRDGWNIMDFVVVMTGVLTTVPGMPNVSAFRTVRVLRPLRSLTVVPGMRLLVTSLLRSIPALLNVVALLLFVFAIFGILGIQIWQGLLHARCRMTPYPIQRVGGGVEGCEDPRSESCAAVVADPSKWEKCHAVPEPWNPETPWTTPVDCFWPVDDTDVFVCSM-SGGGAHECRSD---------RWCGSNYDINGQPRFSN--------AGQDKA---TFVRDLNWGYTNFDNMFAALLTIFQMITMEGW 350          
BLAST of mRNA_S-dermatodea_contig12949.1792.1 vs. uniprot
Match: D8LI93_ECTSI (Similar to sodium channel, voltage-gated, type IX, alpha isoform 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI93_ECTSI)

HSP 1 Score: 209 bits (533), Expect = 1.920e-56
Identity = 92/138 (66.67%), Postives = 111/138 (80.43%), Query Frame = 1
Query:  742 MNHTAYRCLDVSNFDAIDQETSWTQSSSPWSTARDCWWPLDTEDERLCTYDTSSGKHKCEHDSRYMNESQFRWCGSDYDALGNIRFAGGV-FDGVELSGSDIAANSTYVESLNWGYTTFDNIFVAFLSIFQSITMEGW 1152
            M++  +RCL+ SNFD +D++ SWTQSSSPWST +DCWWPLDT+D RLC +D S G H+CEHD  Y+NES FRWCGSDYDALGN RF GGV  +G    G ++  N+T+VE L WGYTTFDNIFVAFL+IFQSIT+EGW
Sbjct:    1 MDYADHRCLEASNFDVVDEDNSWTQSSSPWSTPQDCWWPLDTDDTRLCAFDGSPGNHQCEHDPAYLNESDFRWCGSDYDALGNRRFEGGVTLEGSPWGGWNLTDNATFVEDLAWGYTTFDNIFVAFLTIFQSITLEGW 138          
BLAST of mRNA_S-dermatodea_contig12949.1792.1 vs. uniprot
Match: A0A7S2QWF6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QWF6_9STRA)

HSP 1 Score: 195 bits (496), Expect = 1.670e-51
Identity = 140/394 (35.53%), Postives = 192/394 (48.73%), Query Frame = 1
Query:   70 KEAVFKACGKTFKYAKTSLYVFDELNPIRVACVKTIAHPWFDRFILFLIILNSFVLALTDWSVID-DDPESD-EVGEPIA--EGSWRNELLFESEAVFTAFFTLEFVLKVIAQGFYLGRGSYLRDSWNILDFMVVITALMTNIPQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQIFAGKQHSRCRLTPYPVTSSFEI---GMNHTAYRCLD--------VSNFDAIDQETSWTQSSSPWSTARDCWWPLDTEDERLCTYDTSSGKHKCEHDSRYMNESQFRWCGSDYDALGNIRFAGGVF----DGVELSGSDIAANS--TYVES------------LNWGYTTFDNIFVAFLSIFQSITMEGW 1152
            KE  F+  G  + +A+TSL      NP+R   VK + H  F+  IL  I +NS +LA TD+S +  D  +SD E GEP    + S+RN +  + + VFTA F +E V+KVIA GF     SYLRDSWN LDF++V+ +L+  +                                                            Q+F G  H RCRLTPYPVT  +     G N++ ++C+          +NFD I   +S  + +SPW  A+DC+WPL + D R CT D  SG H C HD   + ++ + WCGS+YDA GN RF G +     +G+  + + I   S  TY+               N+G TTFDN   AF+SIFQSITMEGW
Sbjct:   44 KEYNFEVNGVQYDFAETSLQCLSSQNPVRKFAVKIMLHWSFEFLILLAIGINSILLACTDYSTVRLDVAKSDFEYGEPDTRCDKSYRNCIQEKLDPVFTAIFIIECVVKVIALGFVSHENSYLRDSWNKLDFVIVVMSLVGMLGLDINVSVIRTFRVLRPLKTLSALPGLQLIVRSLLASIPALSSVIVLIMFVFCIFGILGNQLFVGITHQRCRLTPYPVTPDYRWELHGSNYSDFQCIPNYKTYSGKETNFDII--VSSLDKETSPWYVAQDCYWPL-SNDGRTCTLDGGSGAHVCVHDVESIPKTSWSWCGSNYDAWGNPRFNGEINVTMPEGIPYNEATIPDGSHVTYLTKERFNSMPIYNGDKNFGMTTFDNFPRAFVSIFQSITMEGW 434          
BLAST of mRNA_S-dermatodea_contig12949.1792.1 vs. uniprot
Match: B8C0W0_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0W0_THAPS)

HSP 1 Score: 188 bits (478), Expect = 3.900e-49
Identity = 114/343 (33.24%), Postives = 168/343 (48.98%), Query Frame = 1
Query:  175 IAHPWFDRFILFLIILNSFVLALTDWSVIDDDPESDEVGEPIAEGSWRNELLFESEAVFTAFFTLEFVLKVIAQGFYLGRGSYLRDSWNILDFMVVITALMTNIPQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQIFAGKQHSRCRLTPYPVTSS---------------FEIGMNHTAYRCLDVSNFDAIDQETSWTQSSSPW--STARDCWWPLDTEDERLCTYDTSSGKHKCEHDSRYMNESQFRWCGSDYDALGNIRFAGGVFDGVELSGSDIAANSTYVESLNWGYTTFDNIFVAFLSIFQSITMEGW 1152
            ++ P FD  IL  IILNS  +A TD+SV+DD+ +      P  E S RN ++ + +  FT  FT+E +LKVIA GF+  R +YLRD WN+LD ++V+T+++  +P +                                                        +  + G  H+RCRLTP+PV+                  +  M    +RCL  +N    D   SW+QS+SPW  S  +DC WP+D  D R+C+  T  G H C  D  +M ++  R CGS+YD+ GN RF     + VE  G     +  + + LNWG+T+FDN  +AF++ FQS+T+EGW
Sbjct:   11 VSSPSFDNIILIAIILNSIAIACTDYSVVDDNYQ------PSTELSVRNSIIEKIDVPFTVIFTVECLLKVIAFGFWKRRNAYLRDGWNVLDLLIVVTSILGLLPHVPNFSVLRSFRVLRPLRSISKLPSLRKIIGAFSKSIQDLVNVMVLLLFILVCFTLFGVTFWRGLFHARCRLTPFPVSMPSDCRATTDTCWNEFVLDAAMYPYKHRCLPHAN----DNAESWSQSTSPWYFSGRQDCIWPIDETDSRVCSI-TGRGSHSCIKDVEFMGQTIPRTCGSNYDSFGNPRF----IESVEPYGYSRMKDDVFSKDLNWGFTSFDNFSLAFVTTFQSVTLEGW 338          
BLAST of mRNA_S-dermatodea_contig12949.1792.1 vs. uniprot
Match: K3W515_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W515_GLOUD)

HSP 1 Score: 186 bits (472), Expect = 2.500e-48
Identity = 155/360 (43.06%), Postives = 201/360 (55.83%), Query Frame = 1
Query:  145 NPIRVACVKTIAHPWFDRFILFLIILNSFVLALTDWSVIDDD--PESDEV----GEPIAEGSWRNELLFESEAVFTAFFTLEFVLKVIAQGFYLGRGSYLRDSWNILDFMVVITALMTNIPQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQIFAGKQHSRCRLTPYPV------TSSF-----------EIGMNHTAYRCLDVSNFDAIDQETS-WTQSSSPWSTARDCWWPLDTEDERLCTYDTSSGKHKCEHDSRYMNESQFRWCGSDYDALGNIRFAGGVFDGVELSGSDIAANSTYVESLNWGYTTFDNIFVAFLSIFQSITMEGW 1152
            N  R   +   +H  F+  I+  II NS +L L+D++V+D D  P S  +    G  ++  S+RN LL  SE  FT  FT E V+K+IA GF  G+GSYLRDSWN+LDF+VVI++++ ++P MXXXXXXXXXXXXXXXXXXXX                         XXXXXXXXX  IQ+F G  + RCRLT +PV      T S            ++  N   +RCLDV   +  D  TS +T+ +SPW+  +DC+WP+D  D++LC     SG H+C  ++          CGS+YDA GN RF             D A    Y   LNWGYT FD+I  AFL+IFQSIT EGW
Sbjct:    6 NGFRKWFIHVASHKHFEIVIVIAIIANSVILGLSDFTVVDSDLNPASSGLRYQNGVMVSAHSYRNRLLELSEVPFTTIFTAECVIKIIAMGFISGKGSYLRDSWNLLDFVVVISSIVASLPGMXXXXXXXXXXXXXXXXXXXXIPGMRRLITALLKALPALGNVVILQXXXXXXXXXLGIQLFGGGMNRRCRLTEFPVKLPPNNTGSTVEWPIPDEYLTQVLANPDDFRCLDVPVLEYHDNRTSMFTKETSPWNKPQDCFWPVDDSDQQLCAAPGQSGNHQCSSETT---------CGSNYDAFGNARFK-------YHKAMDYAL---YDVDLNWGYTQFDDIGGAFLTIFQSITQEGW 346          
BLAST of mRNA_S-dermatodea_contig12949.1792.1 vs. uniprot
Match: A0A024GD94_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GD94_9STRA)

HSP 1 Score: 184 bits (467), Expect = 1.170e-47
Identity = 139/391 (35.55%), Postives = 193/391 (49.36%), Query Frame = 1
Query:   49 APGYDHSKEAVFKACGKTFKYAKTSLYVFDELNPIRVACVKTIAHPWFDRFILFLIILNSFVLALTDWSVIDDDPESDEVGEPIAEG------SWRNELLFESEAVFTAFFTLEFVLKVIAQGFYLGRGSYLRDSWNILDFMVVITALMTNIPQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQIFAGKQHSRCRLTPYPVTSS--------FEIGMNHTA--------YRCLDVSNFDAIDQETSW-TQSSSPWSTARDCWWPLDTEDERLCTYDTSSGKHKCEHDSRYMNESQFRWCGSDYDALGNIRFAGGVFDGVELSGSDIAANSTYVESLNWGYTTFDNIFVAFLSIFQSITMEGW 1152
            AP   +    +F    ++  +A TSLY+F   N +R  C++       D  ++  II NS +L +TD+SV+D       VG     G      S  N ++  SE  FTA FT+E  LK++A G +  +G+YLRD WN+LDF+VV+ +L+   P +XXXXXXXXXXXXXXXXXX                                      IQ+F G   SRCRLTPYP+           + +  ++ A        Y+CL        D+ T + T+ +SPW   RDC+WP++T DE LCT+ T SG H+C         +    CGS+YD  GN RF              +   + Y  + ++GYTTFDNI  AF +IFQ+IT EGW
Sbjct:   67 APPLRNLHSFLFAQSSRSLNFAGTSLYIFTRHNCVRRWCIRIATSRLLDIIVVSAIIANSAILGITDYSVVDLHMNPTVVGYKFENGVMVEAYSQSNWIVQNSELPFTALFTVECALKIVAMGLFRSKGAYLRDGWNVLDFVVVLMSLIGIFPSIXXXXXXXXXXXXXXXXXXSMIPGMRRLISALLEALPALANVVILQLFVFLIFGILGIQLFGGLMTSRCRLTPYPIMMPVNQDGVFIWPVPPDYLANAIADPLKYQCLQEPLLSHEDRTTRFFTKETSPWRYPRDCFWPINTTDEALCTFSTESGVHRC---------TLGNVCGSNYDTFGNPRF----------KNQKVMQKAVYSTAFDYGYTTFDNIGKAFFTIFQAITQEGW 438          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12949.1792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJ68_9PHAE4.050e-19977.08Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FVE6_ECTSI2.450e-18385.68Voltage Gated Calcium/Sodium Channel subunit alpha... [more]
A0A6H5KPD7_9PHAE6.830e-13562.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI94_ECTSI7.670e-7159.91Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S1G9I4_9STRA1.370e-5736.26Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
D8LI93_ECTSI1.920e-5666.67Similar to sodium channel, voltage-gated, type IX,... [more]
A0A7S2QWF6_9STRA1.670e-5135.53Hypothetical protein (Fragment) n=1 Tax=Triparma p... [more]
B8C0W0_THAPS3.900e-4933.24Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
K3W515_GLOUD2.500e-4843.06Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A024GD94_9STRA1.170e-4735.55Uncharacterized protein n=2 Tax=Albugo candida Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12949contigS-dermatodea_contig12949:1524..3118 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score573.5
Seed ortholog evalue7.1e-161
Seed eggNOG ortholog2880.D7FVE6
KEGG koko:K04851,ko:K04857
KEGG TC1.A.1.11.1,1.A.1.11.2,1.A.1.11.20,1.A.1.11.21
KEGG Pathwayko04010,ko04020,ko04022,ko04024,ko04218,ko04260,ko04261,ko04270,ko04530,ko04713,ko04723,ko04724,ko04725,ko04726,ko04727,ko04728,ko04911,ko04912,ko04921,ko04924,ko04925,ko04927,ko04930,ko04934,ko04973,ko05010,ko05031,ko05410,ko05412,ko05414,map04010,map04020,map04022,map04024,map04218,map04260,map04261,map04270,map04530,map04713,map04723,map04724,map04725,map04726,map04727,map04728,map04911,map04912,map04921,map04924,map04925,map04927,map04930,map04934,map04973,map05010,map05031,map05410,map05412,map05414
EggNOG free text desc.membrane depolarization during action potential
EggNOG OGsKOG2301@1,KOG2301@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04040
Hectar predicted targeting categoryother localisation
Exons2
Model size1152
Cds size1152
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924268.5545194-CDS-S-dermatodea_contig12949:1523..22581622924268.5545194-CDS-S-dermatodea_contig12949:1523..2258Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12949 1524..2258 +
1694079138.4462094-CDS-S-dermatodea_contig12949:1523..22581694079138.4462094-CDS-S-dermatodea_contig12949:1523..2258Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12949 1524..2258 +
1622924268.5648346-CDS-S-dermatodea_contig12949:2701..31181622924268.5648346-CDS-S-dermatodea_contig12949:2701..3118Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12949 2702..3118 +
1694079138.4676588-CDS-S-dermatodea_contig12949:2701..31181694079138.4676588-CDS-S-dermatodea_contig12949:2701..3118Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12949 2702..3118 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12949.1792.1prot_S-dermatodea_contig12949.1792.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig12949 1524..3118 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig12949.1792.1

>prot_S-dermatodea_contig12949.1792.1 ID=prot_S-dermatodea_contig12949.1792.1|Name=mRNA_S-dermatodea_contig12949.1792.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=384bp
MIYPTQHHGPFEKGNEAPGYDHSKEAVFKACGKTFKYAKTSLYVFDELNP
IRVACVKTIAHPWFDRFILFLIILNSFVLALTDWSVIDDDPESDEVGEPI
AEGSWRNELLFESEAVFTAFFTLEFVLKVIAQGFYLGRGSYLRDSWNILD
FMVVITALMTNIPQMPKMTAIRVFRVLRPLKSISALPGLQKLVVSMLRSV
PQLVSVVILLQFIFTVFGIFGIQIFAGKQHSRCRLTPYPVTSSFEIGMNH
TAYRCLDVSNFDAIDQETSWTQSSSPWSTARDCWWPLDTEDERLCTYDTS
SGKHKCEHDSRYMNESQFRWCGSDYDALGNIRFAGGVFDGVELSGSDIAA
NSTYVESLNWGYTTFDNIFVAFLSIFQSITMEGW
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mRNA from alignment at S-dermatodea_contig12949:1524..3118+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig12949.1792.1 ID=mRNA_S-dermatodea_contig12949.1792.1|Name=mRNA_S-dermatodea_contig12949.1792.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1595bp|location=Sequence derived from alignment at S-dermatodea_contig12949:1524..3118+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGATCTACCCCACCCAACACCATGGACCCTTCGAAAAGGGGAACGAGGC CCCCGGGTACGACCACAGCAAGGAAGCCGTGTTCAAGGCGTGCGGGAAGA CGTTCAAGTATGCCAAGACCTCTCTGTACGTCTTCGACGAGCTAAACCCT ATTCGTGTGGCCTGTGTCAAGACCATAGCCCACCCGTGGTTCGACCGATT TATCCTCTTCCTCATCATCCTCAACTCGTTTGTCCTGGCCCTGACGGATT GGTCGGTCATCGACGACGACCCAGAGTCGGACGAAGTGGGCGAGCCTATC GCGGAGGGTTCTTGGCGTAATGAGCTCTTGTTCGAGTCGGAAGCCGTCTT CACGGCGTTTTTTACGCTCGAATTCGTGCTCAAGGTCATCGCGCAAGGGT TTTATCTCGGCCGCGGGTCCTACCTGCGGGACTCTTGGAACATCCTCGAT TTCATGGTCGTGATCACGGCGCTCATGACAAACATACCACAGATGCCGAA GATGACAGCGATTCGAGTGTTCCGGGTGCTGCGGCCGTTGAAAAGTATCT CTGCGTTGCCTGGCCTACAAAAGTTGGTGGTGAGCATGCTGAGGTCCGTG CCGCAGCTGGTGAGCGTGGTGATTCTGCTCCAGTTCATCTTCACGGTGTT CGGCATCTTTGGGATTCAGATCTTCGCCGGGAAGCAGCACTCACGCTGTC GCCTGACCCCGTACCCCGTCACCTCTAGCTTCGAGGTGAAAGCTCCGCCA GATTCTATGTAGTAGATCGAACCATAGGAAGGGGGCACTTGGAAGGAGTT TTACAGGGTGTAGAAACGGCCTTGGTGTGTTTGGTGTCATTGCATTTGCA TTTGGAGCGAGGTTCCTCCATCGTGCGAACAACTGTACAGTGCTGTTGTC AAAGTGCACGGTGAGCTTCGTCTTTCGTGGACTACTATTTACAGTTAGGA GTGAGTTGTTCCATGTCACAGAAGAGGTGTCCGAGGTATATATGTGCAGT TTTTTTCATCCATGCGAGTGCAATATCTTCTCCTGCTGCTCATGGCTGAA TCGGACGTAAAAATGGACCGCATGCTCTCCACCGGTGTAGAAGGCCTGCG CCAAACTTGTCCAGGTAGATAACCCACCTTCCGCTCCTTATGCGCGCTGA CTCACGACGGGCGACCATCCCGCTTCAGATCGGGATGAATCATACAGCGT ACCGTTGTCTGGACGTGAGCAACTTCGACGCCATAGATCAAGAAACTTCG TGGACACAGAGCAGCAGTCCTTGGTCCACCGCTCGAGATTGCTGGTGGCC GCTAGACACTGAAGACGAGCGACTTTGCACGTATGACACGAGTTCCGGGA AGCACAAGTGCGAACATGACTCGCGGTATATGAACGAGAGTCAGTTCAGG TGGTGCGGTAGCGACTACGATGCGTTGGGCAACATACGGTTTGCGGGCGG GGTGTTCGATGGGGTGGAGTTGAGTGGGAGCGACATAGCGGCGAACTCCA CGTACGTGGAGAGCCTGAATTGGGGCTACACAACGTTTGACAACATCTTC GTGGCCTTCTTGTCCATTTTTCAGAGCATCACCATGGAGGGATGG
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Coding sequence (CDS) from alignment at S-dermatodea_contig12949:1524..3118+

>mRNA_S-dermatodea_contig12949.1792.1 ID=mRNA_S-dermatodea_contig12949.1792.1|Name=mRNA_S-dermatodea_contig12949.1792.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2304bp|location=Sequence derived from alignment at S-dermatodea_contig12949:1524..3118+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGATCTACCCCACCCAACACCATGGACCCTTCGAAAAGGGGAACGAGGC
CCCCGGGTACGACCACAGCAAGGAAGCCGTGTTCAAGGCGTGCGGGAAGA
CGTTCAAGTATGCCAAGACCTCTCTGTACGTCTTCGACGAGCTAAACCCT
ATTCGTGTGGCCTGTGTCAAGACCATAGCCCACCCGTGGTTCGACCGATT
TATCCTCTTCCTCATCATCCTCAACTCGTTTGTCCTGGCCCTGACGGATT
GGTCGGTCATCGACGACGACCCAGAGTCGGACGAAGTGGGCGAGCCTATC
GCGGAGGGTTCTTGGCGTAATGAGCTCTTGTTCGAGTCGGAAGCCGTCTT
CACGGCGTTTTTTACGCTCGAATTCGTGCTCAAGGTCATCGCGCAAGGGT
TTTATCTCGGCCGCGGGTCCTACCTGCGGGACTCTTGGAACATCCTCGAT
TTCATGGTCGTGATCACGGCGCTCATGACAAACATACCACAGATGCCGAA
GATGACAGCGATTCGAGTGTTCCGGGTGCTGCGGCCGTTGAAAAGTATCT
CTGCGTTGCCTGGCCTACAAAAGTTGGTGGTGAGCATGCTGAGGTCCGTG
CCGCAGCTGGTGAGCGTGGTGATTCTGCTCCAGTTCATCTTCACGGTGTT
CGGCATCTTTGGGATTCAGATCTTCGCCGGGAAGCAGCACTCACGCTGTC
GCCTGACCCCGTACCCCGTCACCTCTAGCTTCGAGATGATCTACCCCACC
CAACACCATGGACCCTTCGAAAAGGGGAACGAGGCCCCCGGGTACGACCA
CAGCAAGGAAGCCGTGTTCAAGGCGTGCGGGAAGACGTTCAAGTATGCCA
AGACCTCTCTGTACGTCTTCGACGAGCTAAACCCTATTCGTGTGGCCTGT
GTCAAGACCATAGCCCACCCGTGGTTCGACCGATTTATCCTCTTCCTCAT
CATCCTCAACTCGTTTGTCCTGGCCCTGACGGATTGGTCGGTCATCGACG
ACGACCCAGAGTCGGACGAAGTGGGCGAGCCTATCGCGGAGGGTTCTTGG
CGTAATGAGCTCTTGTTCGAGTCGGAAGCCGTCTTCACGGCGTTTTTTAC
GCTCGAATTCGTGCTCAAGGTCATCGCGCAAGGGTTTTATCTCGGCCGCG
GGTCCTACCTGCGGGACTCTTGGAACATCCTCGATTTCATGGTCGTGATC
ACGGCGCTCATGACAAACATACCACAGATGCCGAAGATGACAGCGATTCG
AGTGTTCCGGGTGCTGCGGCCGTTGAAAAGTATCTCTGCGTTGCCTGGCC
TACAAAAGTTGGTGGTGAGCATGCTGAGGTCCGTGCCGCAGCTGGTGAGC
GTGGTGATTCTGCTCCAGTTCATCTTCACGGTGTTCGGCATCTTTGGGAT
TCAGATCTTCGCCGGGAAGCAGCACTCACGCTGTCGCCTGACCCCGTACC
CCGTCACCTCTAGCTTCGAGATCGGGATGAATCATACAGCGTACCGTTGT
CTGGACGTGAGCAACTTCGACGCCATAGATCAAGAAACTTCGTGGACACA
GAGCAGCAGTCCTTGGTCCACCGCTCGAGATTGCTGGTGGCCGCTAGACA
CTGAAGACGAGCGACTTTGCACGTATGACACGAGTTCCGGGAAGCACAAG
TGCGAACATGACTCGCGGTATATGAACGAGAGTCAGTTCAGGTGGTGCGG
TAGCGACTACGATGCGTTGGGCAACATACGGTTTGCGGGCGGGGTGTTCG
ATGGGGTGGAGTTGAGTGGGAGCGACATAGCGGCGAACTCCACGTACGTG
GAGAGCCTGAATTGGGGCTACACAACGTTTGACAACATCTTCGTGGCCTT
CTTGTCCATTTTTCAGAGCATCACCATGGAGGGATGGATCGGGATGAATC
ATACAGCGTACCGTTGTCTGGACGTGAGCAACTTCGACGCCATAGATCAA
GAAACTTCGTGGACACAGAGCAGCAGTCCTTGGTCCACCGCTCGAGATTG
CTGGTGGCCGCTAGACACTGAAGACGAGCGACTTTGCACGTATGACACGA
GTTCCGGGAAGCACAAGTGCGAACATGACTCGCGGTATATGAACGAGAGT
CAGTTCAGGTGGTGCGGTAGCGACTACGATGCGTTGGGCAACATACGGTT
TGCGGGCGGGGTGTTCGATGGGGTGGAGTTGAGTGGGAGCGACATAGCGG
CGAACTCCACGTACGTGGAGAGCCTGAATTGGGGCTACACAACGTTTGAC
AACATCTTCGTGGCCTTCTTGTCCATTTTTCAGAGCATCACCATGGAGGG
ATGG
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