mRNA_S-dermatodea_contig12879.1756.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig12879.1756.1
Unique NamemRNA_S-dermatodea_contig12879.1756.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig12879.1756.1 vs. uniprot
Match: D8LPY1_ECTSI (Superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY1_ECTSI)

HSP 1 Score: 358 bits (918), Expect = 1.790e-120
Identity = 194/315 (61.59%), Postives = 232/315 (73.65%), Query Frame = 1
Query:   28 SWLMVVGSVSASSRLDVIDLPMGFFPEGITLGEGWTAYVGSINDGSIWKGDLSTGEGDVVVSGDSNIMALGLEHDRRSGYLFVAGGATGTVRIYDSEDFSVVADILLAGTNQSSFVNDVILTKTAAYLTDSFQRQIYSVPLHKYSGELVGGEDVIATTLPLSSNFPMFPDLPNANGIEVTDDGKTLIVINMASGELYTVDPETGEAALIDLGGETLQG-GDELVLRKNTLWVVQNTFTGEGTSQLAEVSLSANFTCGSVAPRAFVNELFDDPATALRKGNSLYVVSSKFGVAADDVATTSYEIVRVDRDGGWHAC 969
            SW ++     ASSRLDVIDLP GFFPEGIT GEGWTA+VGS+ +G+IWKGDL TG+G+V   G     A+GL+HDRRS YLFVAGG  GT R+YD EDF++VAD+ L+  N SSFVNDVI+TKTAA+ TDSFQ +IY V L + +G LV G  +   TL LS N P+     N NGIE TDDG  L+++NM S +L+ VDP+TG A LIDLGGE L G GD LVLRKNTLWVV N        Q+ EVSL+A+ +CGS+APRA  N LFD   TA+RKGNSLY V++KFGVAA+DVATT+YEIVRVDRD G   C
Sbjct:   11 SWAIIASE--ASSRLDVIDLPTGFFPEGITNGEGWTAFVGSLLNGNIWKGDLETGQGEVFELGAPG-PAVGLDHDRRSDYLFVAGGPVGTARVYD-EDFALVADLALSDGN-SSFVNDVIITKTAAFFTDSFQPKIYKVNLDRETGALVDG--LAVHTLVLSDNVPVLEGAFNVNGIEATDDGSALVIVNMESQQLFAVDPDTGAATLIDLGGELLPGRGDGLVLRKNTLWVVDNAL-----EQILEVSLAADLSCGSLAPRALSNPLFDTQTTAMRKGNSLYAVNAKFGVAAEDVATTAYEIVRVDRDSGELVC 313          
BLAST of mRNA_S-dermatodea_contig12879.1756.1 vs. uniprot
Match: D7FZ69_ECTSI (Superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ69_ECTSI)

HSP 1 Score: 333 bits (855), Expect = 1.350e-110
Identity = 189/322 (58.70%), Postives = 227/322 (70.50%), Query Frame = 1
Query:    7 RLLGALLSWLMVVGSVSASSRLDVIDLPMGFFPEGITLGEGWTAYVGSINDGSIWKGDLSTGEGDVVVSGDSNIMALGLEHDRRSGYLFVAGGATGTVRIYDSEDFSVVADILLAGTNQSSFVNDVILTKTAAYLTDSFQRQIYSVPLHKYSGELVGGEDVIATTLPLSSNFPMFPDLPNANGIEVTDDGKTLIVINMASGELYTVDPETGEAALIDLGGETL-QGGDELVLRKNTLWVVQNTFTGEGTSQLAEVSLSANFTCGSVAPRAFVNELFDDPATALRKGNSLYVVSSKFGVAADDVATTSYEIVRVDRDGGWHAC 969
            R+ G LL+ L+ V   SASSRLDVIDLP GF PEGIT G GWTA+VGS+ DG+IWKGDL TGEG+V+   D+   A GL HDRRSGYLFVAG  +GT R+YD EDF++VAD+   G   +S +NDV++TK AA+ TDSFQ  IY V L + +G LV G      TL L  NFP   +  N NGIEVTDDG  LIV+N  S ++Y VDP+TG+A +IDLGG+ L   GD LVLRKNTLWV  N        Q+ EVSLSA+ +CGSVA R   N LFD   TA+RKGNSLY V++K  VA +D+ATT+YEIVRVDRDGG  AC
Sbjct:   24 RVSGGLLATLVTV--TSASSRLDVIDLPTGFSPEGITSGGGWTAFVGSLVDGNIWKGDLKTGEGEVMEL-DAPGPAAGLSHDRRSGYLFVAGAFSGTGRVYD-EDFALVADLDF-GDVGTSIINDVVVTKGAAFYTDSFQPHIYKVNLDRETGALVDGSSF--ETLVLGDNFPFVEEAINLNGIEVTDDGSALIVVNSESQQVYAVDPDTGDATVIDLGGDVLGPRGDGLVLRKNTLWVSDNVL-----EQIYEVSLSADLSCGSVATRTLSNPLFDRQTTAMRKGNSLYAVNAKLDVAEEDIATTAYEIVRVDRDGGELAC 333          
BLAST of mRNA_S-dermatodea_contig12879.1756.1 vs. uniprot
Match: D7G508_ECTSI (Superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G508_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 7.570e-96
Identity = 166/329 (50.46%), Postives = 222/329 (67.48%), Query Frame = 1
Query:   13 LGALLSWLMVVGSVSASSRLDVIDLPMGFFPEGITLGEGWTAYVGSINDGSIWKGDLSTGEGDVVVSGDSNIMALGLEHDRRSGYLFVAGGATGTVRIYDS-EDFSVVADILLAGTNQSSFVNDVILTKTA--AYLTDSFQRQIYSVPLHKYSGELVGGEDVIATTLPLSSNFPMFP------DLPNANGIEVTDDGKTLIVINMASGELYTVDPETGEAALIDLGGETLQGGDELVLRKNTLWVVQNTFTGEGTSQLAEVSLSANFTCGSVAPRAFVNELFDDPATALRKGNSLYVVSSKFGVAADDVATTSYEIVRVDRDGGWHACS 972
            LG+LLS L +V +V A  RLD+IDLP+GF PEG+TLG G   YV +   GSIWKGDL TG G VV+ G +   ALG++ DRRS YL+V G  +G++ IYD+ +DFS+VA+I L GT  +S VNDVI+   +  AY+T+S Q Q Y + L +Y G L  G + +A  +PLSS+F   P         N+NGI +TDD  +LI++N  SGEL+ VDP+TG+A LIDLGG+ + GGD LVLRKNTLWV QN   G     + EV LS + +CG++  R   NE F+DPATALRKGNS++   S + V+ +++ATT Y++VRVDRD     C+
Sbjct:    4 LGSLLS-LAIVPAVLAG-RLDLIDLPVGFQPEGVTLGHGQEVYVSAFTGGSIWKGDLETGVGSVVIEGGNGTTALGIDFDRRSDYLWVCGAFSGSLAIYDTTDDFSLVAEIQL-GTVGASLVNDVIIHPRSEYAYITESSQLQFYRIALDEY-GRLPNGPNTVAEVIPLSSDFSFQPGEIIADQALNSNGIVITDDLSSLIIVNYQSGELFAVDPDTGKATLIDLGGDLILGGDGLVLRKNTLWVCQNRLFGTPDQGVVEVLLSEDLSCGTIT-RRLSNEFFNDPATALRKGNSMWTTISMWAVSGEEIATTQYQLVRVDRDSAVSECA 327          
BLAST of mRNA_S-dermatodea_contig12879.1756.1 vs. uniprot
Match: A0A3N5S5I5_9CHLR (Superoxide dismutase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5S5I5_9CHLR)

HSP 1 Score: 231 bits (589), Expect = 1.060e-70
Identity = 136/306 (44.44%), Postives = 187/306 (61.11%), Query Frame = 1
Query:   40 VVGSVSASSRL-DVIDLPMGFFPEGITLGEGWTAYVGSINDGSIWKGDLSTGEGDVVVSGDSNIMALGLEHDRRSGYLFVAGGATGTVRIYDSEDFSVVADILLAGTNQSSFVNDVILTKTAAYLTDSFQRQIYSVPLHKYSG--ELVGGEDVIATTLPLSSNFPMFPDLPNANGIEVTDDGKTLIVINMASGELYTVDPETGEAALIDLGGETLQGGDELVLRKNTLWVVQNTFTGEGTSQLAEVSLSANFTCGSVAPRAFVNELFDDPATALRKGNSLYVVSSKFGVAADDVATTSYEIVRVDR 948
            ++G+  A     +VI LP GF PEGI  G G T YVGSI  G++++GD+ +GEG+V+V       A+GL++D RSG LFV+GG TG   +YD +  + VA+I L+ T   SF+NDV++TK AAY T+SFQ   Y V L ++ G       E+V     PL  +F   PD  N+NGI  T +GK LI++N + G LY VDP TG+A  IDLGG ++  GD L+L+  TL+VVQN       +Q+A + L ++FT GS+      +ELF  P T  R GNSLY V+++FG        T YE+VRV R
Sbjct:   24 LIGAAPAHQAFPEVIPLPNGFQPEGIASGRGNTFYVGSIPTGAVYRGDVRSGEGEVLVPAQEGRSAIGLKYDSRSGLLFVSGGNTGFAYVYDGKTGANVAEIQLSTT--PSFINDVVITKDAAYFTNSFQPVFYRVSLARHGGLPPAPTSEEV-----PLGGDFQFIPDAFNSNGIAATPNGKALIIVNSSEGALYKVDPATGDAKRIDLGGGSVPNGDGLLLQGKTLYVVQNQL-----NQIAVIRLKSDFTSGSIV-NTITSELFRVPTTIARFGNSLYAVNARFGTPP--TPDTEYEVVRVPR 314          
BLAST of mRNA_S-dermatodea_contig12879.1756.1 vs. uniprot
Match: A0A2E0ZGA0_9CHLR (Superoxide dismutase n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E0ZGA0_9CHLR)

HSP 1 Score: 218 bits (555), Expect = 9.790e-66
Identity = 138/304 (45.39%), Postives = 181/304 (59.54%), Query Frame = 1
Query:   37 MVVGSVSASSRL-DVIDLPMGFFPEGITLGEGWTAYVGSINDGSIWKGDLSTGEGDVVVSGDSNIMALGLEHDRRSGYLFVAGGATGTVRIYDSEDFSVVADILLAGTNQSSFVNDVILTKTAAYLTDSFQRQIYSVPLHKYSGELVGGEDVIATTLPLSSNFPMFPDLPNANGIEVTDDGKTLIVINMASGELYTVDPETGEAALIDLGGETLQGGDELVLRKNTLWVVQNTFTGEGTSQLAEVSLSANFTCGSVAPRAFVNELFDDPATALRKGNSLYVVSSKFGVA-ADDVATTSYEIVRV 942
            + V S +A+ R  +VI LP GF PEGI +GEG TAY GS+ DG I+  DLSTG G++++ G     A+GL+ DRR+GYLFV+GG  G  RIY++    +V     AG     FVNDVI+T  AAY TDSF   +Y V L         G     +TL LS +F   P   N NGI  T +G  LI+++ + GELY VDP+TGEA LIDLGGE +  GD LVL    L+VVQN+      +Q+AE  LS N+T  S+  +   ++ FD P TA  +G  LY V+++FG     DV    Y+IVRV
Sbjct:   19 LAVASPAAAQRYPEVIPLPNGFQPEGIVVGEGNTAYAGSLADGDIYTVDLSTGAGEILLEGPGT-PAVGLDFDRRTGYLFVSGGPNGDGRIYNTHTGDLVTSYDFAG----GFVNDVIVTPHAAYFTDSFMPVLYKVDLDD------SGTPGADSTLSLSGDFVFVPGGFNTNGIVATPNGNALIIVHSSRGELYKVDPQTGEATLIDLGGENVNSGDGLVLVARKLFVVQNSL-----NQIAEFHLSRNYTAASLR-QIITDDDFDIPTTADNQGARLYAVNARFGTTPGPDV---EYDIVRV 302          
BLAST of mRNA_S-dermatodea_contig12879.1756.1 vs. uniprot
Match: A0A3N5UU31_9CHLR (Superoxide dismutase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5UU31_9CHLR)

HSP 1 Score: 218 bits (554), Expect = 1.430e-65
Identity = 128/292 (43.84%), Postives = 180/292 (61.64%), Query Frame = 1
Query:   25 LSWLMVVGSVSASSRLDVIDLPMGFFPEGITLGEGWTAYVGSINDGSIWKGDLSTGEGDVVVSGDSNIMALGLEHDRRSGYLFVAGGATGTVRIYDSEDFSVVADILLAGTNQSSFVNDVILTKTAAYLTDSFQRQIYSVPLHKYSGELVGGEDVIATT--LPLSSNFPMFPDLPNANGIEVTDDGKTLIVINMASGELYTVDPETGEAALIDLGGETLQGGDELVLRKNTLWVVQNTFTGEGTSQLAEVSLSANFTCGSVAPRAFVNELFDDPATALRKGNSLYVVSSKFG 894
            LS  M+  + S  +  +VI LP GF PEGI  G+G T YVGSI  G++++GDL +GEG+V+V   +   A+GL++D RSG LFV+GG TG    YD +  + VA+I L+     SF+NDV++TK AAY T+SFQ  ++ VPL K      GG     T+  +PL  ++   P   NANGI  T +GKTLI++N   G LY VDP TG A  IDLGG ++  GD L+L+  TL+VVQN       +++A + L ++F+ G++      + LF  P T  R GNSLY V+++FG
Sbjct:   20 LSLTMIGAAPSHQTFPEVIPLPNGFQPEGIASGKGTTFYVGSIPTGAVFRGDLRSGEGEVLVPAQAGRSAIGLKYDERSGLLFVSGGNTGYAYFYDGKTGANVAEIQLS--TLPSFINDVVITKEAAYFTNSFQPVLHRVPLAKK-----GGLPPAPTSEEIPLGGDYQFTPGAFNANGIAATPNGKTLIIVNSTEGALYKVDPGTGNATRIDLGGGSVPNGDGLLLQGKTLYVVQNQL-----NRIAVIRLKSDFSAGTIV-NTITSPLFRVPTTIARFGNSLYAVNARFG 298          
BLAST of mRNA_S-dermatodea_contig12879.1756.1 vs. uniprot
Match: A0A399Z9Q0_9CHLR (Superoxide dismutase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A399Z9Q0_9CHLR)

HSP 1 Score: 218 bits (554), Expect = 1.700e-65
Identity = 127/293 (43.34%), Postives = 176/293 (60.07%), Query Frame = 1
Query:   73 DVIDLPMGFFPEGITLGEGWTAYVGSINDGSIWKGDLSTGEGDVVVSGDSNIMALGLEHDRRSGYLFVAGGATGTVRIYDSEDFSVVADILLAGTNQSSFVNDVILTKTAAYLTDSFQRQIYSVPLHKYSGELVGGEDVIATTLPLSSNFPMFPDLPNANGIEVTDDGKTLIVINMASGELYTVDPETGEAALIDLGGETLQGGDELVLRKNTLWVVQNTFTGEGTSQLAEVSLSANFTCGSVAPRAFVNELFDDPATALRKGNSLYVVSSKFGVAADDVATTSYEIVRVDRD 951
             +I LP GF PEG+ +G G   Y GS+  G+I++ DL TGEG++ V      MA+GL  D+RS  +FVAGGA G   +YD+   + +A  +   T++ SFVNDV++T+ AAY TDSF+  +Y VPL    G+L   +   AT LPL  +F   PD  NANGI+ T DGK+L+++N A G+LY VDP TG A+LIDLGG  +  GD ++L   TL+VVQN       +Q+A V+L A  T G +      +  F  P T    GN+LY V+++F         T YEIVRV ++
Sbjct:   31 SIIALPNGFRPEGVVVGYGHAIYAGSLGTGAIYRADLRTGEGELAVPPQDGRMAVGLAFDKRSNAIFVAGGAGGAGYVYDAASGASLA--VYPFTDEPSFVNDVVVTREAAYFTDSFRPFLYRVPLGP-GGQLP--DPSAATALPLGGDFVFVPDAFNANGIDATPDGKSLVIVNSAEGKLYHVDPATGHASLIDLGGGAVPNGDGILLDGKTLYVVQNQL-----NQIAVVALDAKLTEGEIVAH-ITDPAFRIPTTVAEFGNALYAVNARFDTPP--TPDTEYEIVRVTKE 310          
BLAST of mRNA_S-dermatodea_contig12879.1756.1 vs. uniprot
Match: A0A643JWK0_9EURY (Superoxide dismutase n=2 Tax=Haloferax TaxID=2251 RepID=A0A643JWK0_9EURY)

HSP 1 Score: 218 bits (554), Expect = 2.030e-65
Identity = 136/308 (44.16%), Postives = 186/308 (60.39%), Query Frame = 1
Query:   34 LMVVGSVSASSRLD---VIDLPMGFFPEGITLGEGWTAYVGSINDGSIWKGDLSTGEGDVVVSGDSNIMALGLEHDRRSGYLFVAGGATGTVRIYDSEDFSVVADILLAGTNQSSFVNDVILTKTAAYLTDSFQRQIYSVPLHKYSGELVGGEDVIATTLPLSSNFPMFPDLPNANGIEVTDDGKTLIVINMASGELYTVDPETGEAALIDLGGETLQGGDELVLRKNTLWVVQNTFTGEGTSQLAEVSLSANFTCGSVAPRAFVNELFDDPATALRKGNSLYVVSSKFGVAADDVATTSYEIVRVDR 948
            L VVG+ +A+++     VI LP+GF PEGI  G G   +VGS+  G+I++GDL TG GDV V       A+GL HD RS YLFVAGG TG   +YD++  ++VAD  L     S FVNDV++T+TAAY TDS +  +Y +PL   +G  V  +  +   +PLS +F       NANGI+   +GK LIV+N ++G LY VDP +G+A  IDLGGET+  GD ++L   TL+VV+N       +Q+A V+L  + T G V      N LFD P T    GNSLY V+++FG      A   Y++VRV +
Sbjct:   27 LAVVGTGTAAAKSAFPAVIPLPIGFQPEGIVTGLGTDFFVGSLAGGAIYRGDLRTGSGDVFVPPTGG-PAVGLSHDARSNYLFVAGGPTGRASVYDADTGALVADYEL---QDSQFVNDVVVTRTAAYFTDSARPSLYRIPLG--AGGDVPNQSAVEE-IPLSGDFTSVAGF-NANGIDAPPNGKYLIVVNTSTGLLYKVDPASGDATEIDLGGETVTAGDGILLAGRTLYVVRNQL-----NQIAVVTLDPDATAGEVVD-VITNPLFDVPTTVTGFGNSLYAVNARFGTPP---ANAEYDVVRVSK 317          
BLAST of mRNA_S-dermatodea_contig12879.1756.1 vs. uniprot
Match: A0A2S6I9P0_9BACT (Uncharacterized protein n=1 Tax=Lewinella xylanilytica TaxID=1514080 RepID=A0A2S6I9P0_9BACT)

HSP 1 Score: 216 bits (551), Expect = 5.400e-65
Identity = 134/293 (45.73%), Postives = 174/293 (59.39%), Query Frame = 1
Query:   73 DVIDLPMGFFPEGITLGEGWTAYVGSINDGSIWKGDLSTGEGDVVVSGDSNIMALGLEHDRRSGYLFVAGGATGTVRIYDSEDFSVVADILLAGTNQSSFVNDVILTKTAAYLTDSFQRQIYSVPLHKYSGELVGGEDVIATTLPLSSNFPMFPDLPNANGIEVTDDGKTLIVINMASGELYTVDPETGEAALIDLGGETLQGGDELVLRKNTLWVVQNTFTGEGTSQLAEVSLSANFTCGSVAPRAFVNELFDDPATALRKGNSLYVVSSKFGV-AADDVATTSYEIVRVDR 948
            ++I LP GF PEGI  G G   YVGS+ DGSI++GD   G G+V+ +     +A+GL  D  + YL+VAGG TG   + D+    VVA     G    SFVNDV +TK AAY T+SF   +Y   L +  GE  GG +    +L LS  F   P   NANGIE T DGK LI++N + G LY V+PET  +  IDLGGET+  GD ++L   TL+VVQN+F     +Q+AEV LSA+   G++      NE F  P T  RKG +LY V+++FGV A  DVA   YE+V V R
Sbjct:   41 ELIQLPDGFQPEGIVAGTGNEFYVGSLADGSIYRGDFRNGAGEVIFTPAGGGVAVGLAFDPATKYLYVAGGGTGGAYVLDTRSVEVVATYDFGG----SFVNDVAITKEAAYFTESFAPNLYVAALDR-RGEPTGGSE----SLTLSGEFDFQPGGFNANGIEATPDGKELIIVNSSLGALYRVEPETAVSRRIDLGGETVVNGDGILLVGQTLYVVQNSF-----NQIAEVDLSADLRSGTITG-IITNEAFRVPTTVARKGGTLYAVNARFGVPAGPDVA---YEVVAVKR 315          
BLAST of mRNA_S-dermatodea_contig12879.1756.1 vs. uniprot
Match: A0A6A8G917_9EURY (Superoxide dismutase n=3 Tax=Haloferacaceae TaxID=1644056 RepID=A0A6A8G917_9EURY)

HSP 1 Score: 215 bits (547), Expect = 1.510e-64
Identity = 137/308 (44.48%), Postives = 182/308 (59.09%), Query Frame = 1
Query:   34 LMVVGSVSASSRL---DVIDLPMGFFPEGITLGEGWTAYVGSINDGSIWKGDLSTGEGDVVVSGDSNIMALGLEHDRRSGYLFVAGGATGTVRIYDSEDFSVVADILLAGTNQSSFVNDVILTKTAAYLTDSFQRQIYSVPLHKYSGELVGGEDVIATTLPLSSNFPMFPDLPNANGIEVTDDGKTLIVINMASGELYTVDPETGEAALIDLGGETLQGGDELVLRKNTLWVVQNTFTGEGTSQLAEVSLSANFTCGSVAPRAFVNELFDDPATALRKGNSLYVVSSKFGVAADDVATTSYEIVRVDR 948
            L VVGS SAS+      VI LP GF PEGI  G G   +VGS+  G+I++GDL TG G+V V      +A+GL HD RS YLFVAGG TG   +YD+   ++VAD  L G    +FVNDV++T+TAAY TDSF+  +Y VPL   +G  V  +  +   +PLS +F       NANGI+   +G+ LIV+N ++G LY VDP TG+A  IDLGG +L  GD ++L   TL+VV+N       + +A V L    T G V      +  FD P T    GNSLY V+++FG    D A   Y++VRV +
Sbjct:   10 LAVVGSGSASAAAAYPSVIPLPTGFRPEGIVTGLGNEFFVGSLAAGAIYRGDLRTGSGEVFVPPVEGGVAVGLSHDARSNYLFVAGGPTGQASVYDANTGALVADYGLQG--PPTFVNDVVVTRTAAYFTDSFRPALYRVPLG--AGGDVPDQSAVEE-IPLSGDFTSVGGF-NANGIDAPPNGEYLIVVNSSTGLLYKVDPATGDATEIDLGGASLTAGDGILLEGRTLYVVRNQL-----NLIAVVQLDPEATAGEVVDE-ITDPQFDVPTTVAGFGNSLYAVNARFGTP--DPANAEYDVVRVSK 303          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12879.1756.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPY1_ECTSI1.790e-12061.59Superoxide dismutase n=1 Tax=Ectocarpus siliculosu... [more]
D7FZ69_ECTSI1.350e-11058.70Superoxide dismutase n=1 Tax=Ectocarpus siliculosu... [more]
D7G508_ECTSI7.570e-9650.46Superoxide dismutase n=1 Tax=Ectocarpus siliculosu... [more]
A0A3N5S5I5_9CHLR1.060e-7044.44Superoxide dismutase n=1 Tax=Chloroflexi bacterium... [more]
A0A2E0ZGA0_9CHLR9.790e-6645.39Superoxide dismutase n=1 Tax=Anaerolineaceae bacte... [more]
A0A3N5UU31_9CHLR1.430e-6543.84Superoxide dismutase (Fragment) n=1 Tax=Chloroflex... [more]
A0A399Z9Q0_9CHLR1.700e-6543.34Superoxide dismutase n=1 Tax=Chloroflexi bacterium... [more]
A0A643JWK0_9EURY2.030e-6544.16Superoxide dismutase n=2 Tax=Haloferax TaxID=2251 ... [more]
A0A2S6I9P0_9BACT5.400e-6545.73Uncharacterized protein n=1 Tax=Lewinella xylanily... [more]
A0A6A8G917_9EURY1.510e-6444.48Superoxide dismutase n=3 Tax=Haloferacaceae TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12879contigS-dermatodea_contig12879:1522..5805 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score359.4
Seed ortholog evalue1.8e-96
Seed eggNOG ortholog2880.D8LPY1
EggNOG OGs2D5U8@1,2SZPX@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons7
Model size981
Cds size981
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924265.6448772-CDS-S-dermatodea_contig12879:1521..17371622924265.6448772-CDS-S-dermatodea_contig12879:1521..1737Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12879 1522..1737 -
1694079136.2210145-CDS-S-dermatodea_contig12879:1521..17371694079136.2210145-CDS-S-dermatodea_contig12879:1521..1737Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12879 1522..1737 -
1622924265.6602445-CDS-S-dermatodea_contig12879:2042..21141622924265.6602445-CDS-S-dermatodea_contig12879:2042..2114Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12879 2043..2114 -
1694079136.2375169-CDS-S-dermatodea_contig12879:2042..21141694079136.2375169-CDS-S-dermatodea_contig12879:2042..2114Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12879 2043..2114 -
1622924265.6749268-CDS-S-dermatodea_contig12879:2660..27921622924265.6749268-CDS-S-dermatodea_contig12879:2660..2792Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12879 2661..2792 -
1694079136.2512956-CDS-S-dermatodea_contig12879:2660..27921694079136.2512956-CDS-S-dermatodea_contig12879:2660..2792Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12879 2661..2792 -
1622924265.683858-CDS-S-dermatodea_contig12879:3366..34861622924265.683858-CDS-S-dermatodea_contig12879:3366..3486Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12879 3367..3486 -
1694079136.2640605-CDS-S-dermatodea_contig12879:3366..34861694079136.2640605-CDS-S-dermatodea_contig12879:3366..3486Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12879 3367..3486 -
1622924265.6927004-CDS-S-dermatodea_contig12879:3704..38531622924265.6927004-CDS-S-dermatodea_contig12879:3704..3853Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12879 3705..3853 -
1694079136.271781-CDS-S-dermatodea_contig12879:3704..38531694079136.271781-CDS-S-dermatodea_contig12879:3704..3853Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12879 3705..3853 -
1622924265.7034402-CDS-S-dermatodea_contig12879:5309..54441622924265.7034402-CDS-S-dermatodea_contig12879:5309..5444Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12879 5310..5444 -
1694079136.2796295-CDS-S-dermatodea_contig12879:5309..54441694079136.2796295-CDS-S-dermatodea_contig12879:5309..5444Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12879 5310..5444 -
1622924265.7130463-CDS-S-dermatodea_contig12879:5648..58051622924265.7130463-CDS-S-dermatodea_contig12879:5648..5805Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12879 5649..5805 -
1694079136.2877653-CDS-S-dermatodea_contig12879:5648..58051694079136.2877653-CDS-S-dermatodea_contig12879:5648..5805Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12879 5649..5805 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12879.1756.1prot_S-dermatodea_contig12879.1756.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig12879 1522..5805 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig12879.1756.1

>prot_S-dermatodea_contig12879.1756.1 ID=prot_S-dermatodea_contig12879.1756.1|Name=mRNA_S-dermatodea_contig12879.1756.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=327bp
MARLLGALLSWLMVVGSVSASSRLDVIDLPMGFFPEGITLGEGWTAYVGS
INDGSIWKGDLSTGEGDVVVSGDSNIMALGLEHDRRSGYLFVAGGATGTV
RIYDSEDFSVVADILLAGTNQSSFVNDVILTKTAAYLTDSFQRQIYSVPL
HKYSGELVGGEDVIATTLPLSSNFPMFPDLPNANGIEVTDDGKTLIVINM
ASGELYTVDPETGEAALIDLGGETLQGGDELVLRKNTLWVVQNTFTGEGT
SQLAEVSLSANFTCGSVAPRAFVNELFDDPATALRKGNSLYVVSSKFGVA
ADDVATTSYEIVRVDRDGGWHACSVK*
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mRNA from alignment at S-dermatodea_contig12879:1522..5805-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig12879.1756.1 ID=mRNA_S-dermatodea_contig12879.1756.1|Name=mRNA_S-dermatodea_contig12879.1756.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4284bp|location=Sequence derived from alignment at S-dermatodea_contig12879:1522..5805- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCGCGACTGCTTGGCGCTCTGCTATCGTGGCTCATGGTCGTCGGATC CGTGTCTGCTTCGTCGAGGCTAGATGTGATTGACTTGCCGATGGGCTTCT TCCCTGAGGGAATCACGCTCGGAGAGGGGTGGACAGCCTATGTGGGGTCC ATCAATGGTGAGAAAAAGGATGTATCTGCAGGCACAGGGCCAACCAATAC TGTGTTCATGAACCGGCCAAAATATCGTTCCCGTGTGTCTTCCAAACATC ATCTCGGAAACGCGGGTGAAAAGAAAGAAGAACTGTTAGGGTCGTCAATG TAGGACTGATAACAAACGATATCCTTGCTTTTTCCCGGGCTGCCGATCAA TTCAATGCCAGACGGATCGATCTGGAAGGGCGACCTTAGCACCGGCGAGG GAGATGTTGTGGTTTCAGGTGATAGCAACATCATGGCGCTTGGCTTGGAG CATGACAGGCGCTCGGGCTACCTGTTCGTTGCAGGTGGCGCTACAGGTGA ACAGTGATCATCACACGTGGAAAATTGAAAATTCACCTGCGCGAGGTCAG ACGTCATTTTGCTTGAAGTGACGAAAGCGACAAACCTCAACAAGGCCTAA CCCATCAGATCCCAGCACCTACTGGGAGGGGCGAGCGGGCCCAAGCGTGT GGGCATTCCACATAACCTTCAGCCGAAAAATCAAGCTGCAGTTGTTGCGT GGATCTCGCCAATTGAGGCATCCTACGTTCGGGGGCACATATATATTTGG TTGCATGGGAGTCGCTTCAAAATGCGGATAACCGTCGTTGAAGAATATGC ACTGAACAGACATGAATGCCCCCGCATGACCGGAACTTTATTCGAGGAAA GTGGGGAGACTCTTTCTTGGTATGGAAAAGAGAACGTCTACCAGATGCTT TCAAAAGCAGTTCAGTTGGTGCTACCAAGCGATTGAAAATATGCCCCCTA AACAATTTAAGATTTCAGAAACATAGAGCGAGCGTTGGGGTCCCACCTTT TCAAGAGGGAAGATGGTCAAAGCTACACCTGTGGAGGCTCAGTTGTTACA TATGATGCTATGGTGTCTTATCATGCATGATGTTACATGGTTACGGTGTC ATACAGGATATGGGTCTTTGTCCTGAACTATATCCTGGTGATGTATCTTT GCCGCGTTTTTATGAGCCAATAACATTAAATGTTCCTTTCCTACCACATA TTTTTGCTGTATCTATGCCCCCGCCTATCCGCCAATCGTACGATGACCAA GTTTGACCTGCACGAATATTGCATGGTGTGGTGTTTCTGTCATCATACAA CACCCGCTTGACAACAAACTGTAGCCCAGTTATGGCCTTTGTTGCCCTCC CAAAATGGGGTCAGCGTGTACCGACTCATCACTGTGTGCTCTGGTACGTC CGTGACCATCCGTGAGTTGGACTCATGAAAAGGAGAAGACAAAGCATCCG ATTAAATACTGCTGAAATGTATCATGGTACTTCCTATAAAGGCCGTCCAC GAATGAATATTCTTCCATCAACACGTGGTTCTGTTTGAATTCTTAGTGGA AATTACCACGCCTTTGTCCATTTCGCTGTGCGAATACGATGCTATCCTGT TGTGCGGTCCATGTGGGCTTATGACCGGCGGTAGGTTGAACGAATGGCCG TTAAACAAACAAACTGCACATGATATTGTAGTCAAGAAAAGCAGCATAAT TTTTATTTTAGAGTCGTGTACTTGTGAAGCAAAGTATTTGCCAAGCTGTT GGGTGCAAGTACGGAATATGTACTCTTCAGTAGGAGCGCCAAGCGCGCAC TACCTTGCCCTTTTGAGCCCTTCGCCTCTTGTCGCTGTCGAGCTACTCGA ACTTACTTGCTTATCTCGATCCCATGTTCTCCCGATGAAATTAAACGTCA AAGCACCAAACAATTCAGCTGCCACCCCCCACCCCCCTCCCGCGCGCACA AGGCACGGTTCGCATCTACGACTCGGAGGATTTCAGCGTCGTAGCCGATA TTCTATTGGCCGGTACTAACCAGTCTTCGTTTGTGAACGATGTCATCTTG ACCAAGACTGCTGCTTACCTCACGGACTCCTTTCAGCGCCAGATTTACTC GGTGAGAGGAGAACCTAACTTGACCCAGTGGATGCAGGTCTGATATGCAC GCCCTATCGACAAAAGTTAGCACCCAACCCGTAACAGCACGGCGTTGAGC CGCCAATAAACGTGCTAGCATTTCCCGACGCCAGCTCGCTATCAAACATT ATCAGCCCATTCGTTTACAAGGGTTTGACCGCAGCTTTTCTAACTCCTTG CCATCCTCCGAATAAGCAGGTACCGCTACATAAGTACAGTGGGGAACTCG TGGGCGGTGAGGATGTCATCGCGACCACTCTTCCTCTCAGCTCCAACTTC CCCATGTTTCCCGATTTGCCCAATGCAAACGGCATCGAGGTAAGGAAGTT GTCCCAAGCCGTTCGCTGTAAGTTGCGCAGCAACTTCCTGTAGGGGAGAG GGGTGTTCTTTTAGTTTACTTTTTTGCTTATTCATTTCTTTTTAGCAGGC CCAAGGTCCGAGGTATGCCCCCTCTGTTTCCGAGAGTTTGTGTCTATTCC TTCTTTGTATGTACTATACAAGCAATTATGTAGTGGTGTTTTTCGATCTC TCGATTTCTCATCTGACCAAAGAGCGGGATCGGCAACTATTGGTGGGCCG GCCGATTGTAAGTGTGAAAATCAAATCAAATCAAAGCAACTGCCCTGGCT CCGCTTGGCTGTCTGATGTCGGCGCCGAAACCGCTACGTGTACGGAGTGG AACCCGCTCTGTTCACCTAGCTTGAGGTTCCCTCGATTTGTTTCTTCCTG GCTGCATAAAATGCTTTGGCTACGCACTATACACGGGCTAATTTAGCGGT AAGGTACATGAAACAAGGACGAGTAGGGTAGATTTATTTTTTCTCGCCAG GCCATTCTACATGTCAGAATTACTCCAGCCAGCACAGAAACCTCCAAAAC CAACTGCTGTCAGGTGACGGATGACGGTAAGACGCTCATTGTGATAAACA TGGCCTCGGGGGAACTGTACACCGTCGACCCTGAAACCGGCGAAGCAGCC TTGATCGACCTCGGCGGCGAGACTTTGCAAGGGGGAGACGAGTTGGTGAG ACAGGCAGAGACATACAAAACATGTGATGTGATCATCGCACAAACGTACA GGCGCGGCGGGGTCTAAGAATTTCGCATCCCCGGACGTAGAAAAATCGTA TGTAGGTATGCTACGCAATTCCCGGTGCCGAAGTTGGAACTCACAGCCCT TTTTAATTACGCGAGCTACAGGGTGAGCCTACGGGTGGCGCCATAGCCGA ATTCCCAGTTGCTGTGTGACAGGAACATTCCCCACTTCCCTGATTATCCC GACCTGTTCTTAGCCTTTGGTCTCCCTCCGTGCCTTGACCCATCCGATTA TACATGAAACCATCGCGACCAAATGCCAGCATGAGCGCTTGAAGTTTTGG TTTTTGGCATCGCGTCTAGCTGGTTTTGCGTGAGGCTCGTGTTCAACAGT TCGGAGTAAACAAAACTATTTATGTCAGCTGGCATGTGCTCTTAGAATAA ATGTATAAATACATTGCCCTCGTGCCCTCAGCTGAGTGCCTCGTGTAGTT TGTCCCGCCGTGATGTGCACGTTATCCCGCTGCCTTGGCAGGTGCTGCGC AAGAATACACTTTGGGTGGTCCAAAACACCTTCACTGGAGAAGGAACGTC CCAACTTGCCGAGGTAGACCGCTTCAAGTGCGGAGGCAGAGCGATAGAGA GAGTTTGTCGAGTCGGAGCCCATGTCAAAAGTCCAACCTAGGGAGTCCAC CAACCAGGCCGACTCGAGTGTGTTTTAACAAGTATGATAGCCGTGCTTGC CGCGTCACCCGCGGGTCCCAGATAACTCAATCTACACACGCATATCGTTT TTGCGTAGGGAAGATGCTCGAAGAGTGTCCAAAGACGTTCGGCGATTGGA ATGACGAAAATGGACATCCCGGCATGAATTTTATGGTTCGAACCACACGC TTGCCATGATCCCACCAGGTTTCGCTCTCGGCCAACTTCACCTGCGGTTC TGTGGCGCCCCGTGCCTTCGTAAACGAGCTCTTCGACGACCCCGCAACCG CACTGCGCAAGGGCAATTCTCTTTATGTGGTATCGTCCAAGTTTGGGGTA GCGGCAGATGACGTCGCCACGACTTCGTATGAAATAGTTCGCGTCGATCG GGATGGTGGGTGGCATGCGTGCTCGGTAAAGTAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig12879:1522..5805-

>mRNA_S-dermatodea_contig12879.1756.1 ID=mRNA_S-dermatodea_contig12879.1756.1|Name=mRNA_S-dermatodea_contig12879.1756.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1962bp|location=Sequence derived from alignment at S-dermatodea_contig12879:1522..5805- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCGCGACTGCTTGGCGCTCTGCTATCGTGGCTCATGGTCGTCGGATC
CGTGTCTGCTTCGTCGAGGCTAGATGTGATTGACTTGCCGATGGGCTTCT
TCCCTGAGGGAATCACGCTCGGAGAGGGGTGGACAGCCTATGTGGGGTCC
ATCAATGATGGCGCGACTGCTTGGCGCTCTGCTATCGTGGCTCATGGTCG
TCGGATCCGTGTCTGCTTCGTCGAGGCTAGATGTGATTGACTTGCCGATG
GGCTTCTTCCCTGAGGGAATCACGCTCGGAGAGGGGTGGACAGCCTATGT
GGGGTCCATCAATGACGGATCGATCTGGAAGGGCGACCTTAGCACCGGCG
AGGGAGATGTTGTGGTTTCAGGTGATAGCAACATCATGGCGCTTGGCTTG
GAGCATGACAGGCGCTCGGGCTACCTGTTCGTTGCAGGTGGCGCTACAGA
CGGATCGATCTGGAAGGGCGACCTTAGCACCGGCGAGGGAGATGTTGTGG
TTTCAGGTGATAGCAACATCATGGCGCTTGGCTTGGAGCATGACAGGCGC
TCGGGCTACCTGTTCGTTGCAGGTGGCGCTACAGGCACGGTTCGCATCTA
CGACTCGGAGGATTTCAGCGTCGTAGCCGATATTCTATTGGCCGGTACTA
ACCAGTCTTCGTTTGTGAACGATGTCATCTTGACCAAGACTGCTGCTTAC
CTCACGGACTCCTTTCAGCGCCAGATTTACTCGGCACGGTTCGCATCTAC
GACTCGGAGGATTTCAGCGTCGTAGCCGATATTCTATTGGCCGGTACTAA
CCAGTCTTCGTTTGTGAACGATGTCATCTTGACCAAGACTGCTGCTTACC
TCACGGACTCCTTTCAGCGCCAGATTTACTCGGTACCGCTACATAAGTAC
AGTGGGGAACTCGTGGGCGGTGAGGATGTCATCGCGACCACTCTTCCTCT
CAGCTCCAACTTCCCCATGTTTCCCGATTTGCCCAATGCAAACGGCATCG
AGGTACCGCTACATAAGTACAGTGGGGAACTCGTGGGCGGTGAGGATGTC
ATCGCGACCACTCTTCCTCTCAGCTCCAACTTCCCCATGTTTCCCGATTT
GCCCAATGCAAACGGCATCGAGGTGACGGATGACGGTAAGACGCTCATTG
TGATAAACATGGCCTCGGGGGAACTGTACACCGTCGACCCTGAAACCGGC
GAAGCAGCCTTGATCGACCTCGGCGGCGAGACTTTGCAAGGGGGAGACGA
GTTGGTGACGGATGACGGTAAGACGCTCATTGTGATAAACATGGCCTCGG
GGGAACTGTACACCGTCGACCCTGAAACCGGCGAAGCAGCCTTGATCGAC
CTCGGCGGCGAGACTTTGCAAGGGGGAGACGAGTTGGTGCTGCGCAAGAA
TACACTTTGGGTGGTCCAAAACACCTTCACTGGAGAAGGAACGTCCCAAC
TTGCCGAGGTGCTGCGCAAGAATACACTTTGGGTGGTCCAAAACACCTTC
ACTGGAGAAGGAACGTCCCAACTTGCCGAGGTTTCGCTCTCGGCCAACTT
CACCTGCGGTTCTGTGGCGCCCCGTGCCTTCGTAAACGAGCTCTTCGACG
ACCCCGCAACCGCACTGCGCAAGGGCAATTCTCTTTATGTGGTATCGTCC
AAGTTTGGGGTAGCGGCAGATGACGTCGCCACGACTTCGTATGAAATAGT
TCGCGTCGATCGGGATGGTGGGTGGCATGCGTGCTCGGTAAAGTAGGTTT
CGCTCTCGGCCAACTTCACCTGCGGTTCTGTGGCGCCCCGTGCCTTCGTA
AACGAGCTCTTCGACGACCCCGCAACCGCACTGCGCAAGGGCAATTCTCT
TTATGTGGTATCGTCCAAGTTTGGGGTAGCGGCAGATGACGTCGCCACGA
CTTCGTATGAAATAGTTCGCGTCGATCGGGATGGTGGGTGGCATGCGTGC
TCGGTAAAGTAG
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