mRNA_S-dermatodea_contig12875.1755.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig12875.1755.1 vs. uniprot
Match: A0A6H5JET5_9PHAE (3Beta_HSD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET5_9PHAE) HSP 1 Score: 313 bits (801), Expect = 1.620e-97 Identity = 174/308 (56.49%), Postives = 208/308 (67.53%), Query Frame = 2
Query: 8 IQRVLSWVGWGLNRLAVGAKGAKTGS----MVFAENLVEAQVLAGANLMGRITPDAPSGEV-----------EQR-------PRAPSASGRSYVITNGEPCNLQTFMDGILCGLDFPTSKVVRVPVEVALFTARVAELAYQIGITKRPAWTRAEVRRLTEDS-TFSIARAREDLGYEPIVDPETALQRTVDSLKRARWARHHLRRPSLGYCICNPLGIWLVTLAAFGGPCPAFLAPLASKAAHVGLLLVNQLSRVRAVCVSVYLIHVLEGVYAYRAAKKAGHRDTAPLWFLQTFVIGFPSIALVNKLK 862
+ R L WVGWGLNR+AVG K + G MV +NL EA +LAGA L R DAP+ V EQR AP+ +GR+Y +T+G+P N Q F+D IL GL F TSK++RVP VAL ARVAEL ++GIT PA TR+++R LTE T S ARA+ D GY P VDP TA +RTV+SLKR WARH +RRP+L Y I NP GIWLVTLAAFGGPCP F LA A HVGL L+ + S VRAVC++VYL+HVLEGVYA+R A AGHRD AP WF QTF++GFPS+ LVN LK
Sbjct: 174 LHRALLWVGWGLNRVAVGPKCPEDGGVKVDMVHVDNLAEAHLLAGAKLKKRAETDAPNAMVDVGAGVEGADAEQRRGPGSKSEAAPACAGRAYDVTDGQPRNPQAFLDEILDGLGFATSKLLRVPTSVALLVARVAELLCKVGITTAPALTRSDIRGLTEARRTHSNARAQRDFGYVPRVDPATATKRTVESLKRDGWARHRVRRPALAYWITNPGGIWLVTLAAFGGPCPPFTEALARSAGHVGLRLLKEQSTVRAVCIAVYLVHVLEGVYAFRVAWHAGHRDAAPGWFAQTFLLGFPSVFLVNDLK 481
BLAST of mRNA_S-dermatodea_contig12875.1755.1 vs. uniprot
Match: D7FV37_ECTSI (3Beta_HSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV37_ECTSI) HSP 1 Score: 310 bits (793), Expect = 9.380e-97 Identity = 173/309 (55.99%), Postives = 211/309 (68.28%), Query Frame = 2
Query: 8 IQRVLSWVGWGLNRLAVGAKGAKTGS----MVFAENLVEAQVLAGANLMG-RITPDAPSGEV-----------EQR-------PRAPSASGRSYVITNGEPCNLQTFMDGILCGLDFPTSKVVRVPVEVALFTARVAELAYQIGITKRPAWTRAEVRRLTEDS-TFSIARAREDLGYEPIVDPETALQRTVDSLKRARWARHHLRRPSLGYCICNPLGIWLVTLAAFGGPCPAFLAPLASKAAHVGLLLVNQLSRVRAVCVSVYLIHVLEGVYAYRAAKKAGHRDTAPLWFLQTFVIGFPSIALVNKLK 862
+ R LSWVGWGL+R+AVG K + G MV +NL EA +LAGA L R DAP+ V EQR AP+ +G++Y +T+G+P N Q F+D IL GL F TSK++RVP VAL A VAEL ++GIT PA TR+++R LTE T S ARA+ D GY P VDP A++RTV+SLKR WARH +RRP+L Y I NP GIWLVTLAAFGGPCPAF PLA A HVGL L+ + S VRAVC++VYL+HVLEGVYA+R A+ AGHRD AP WF QTF++GFPS+ LVN LK
Sbjct: 139 LHRALSWVGWGLDRVAVGPKCPEDGGVKVDMVHLDNLAEAHLLAGARLKKKRAETDAPNAMVDVGADVGGAAAEQRRGPGSKTEAAPACAGKAYDVTDGQPRNPQAFLDEILDGLGFATSKLLRVPTTVALLAAWVAELLCKVGITTAPALTRSDIRGLTEARRTHSNARAQRDFGYVPRVDPAAAIKRTVESLKRDGWARHRVRRPALAYWITNPGGIWLVTLAAFGGPCPAFAEPLARSAGHVGLRLLKEQSTVRAVCIAVYLVHVLEGVYAFRVARHAGHRDAAPGWFAQTFLLGFPSVFLVNDLK 447
BLAST of mRNA_S-dermatodea_contig12875.1755.1 vs. uniprot
Match: D8LSA6_ECTSI (3Beta_HSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSA6_ECTSI) HSP 1 Score: 246 bits (629), Expect = 1.160e-73 Identity = 140/297 (47.14%), Postives = 181/297 (60.94%), Query Frame = 2
Query: 14 RVLSWVGWGLNRLAVGAKGAKTGSMVFAENLVEAQVLAGANLMGRITPDAPSGEVEQRPRAPSASGRSYVITNGE------------PCNLQTFMDGILCGLDFPTSKVVRVPVEVALFTARVAELAYQIGITKRP-AWTRAEVRRLTEDSTFSIARAREDLGYEPIVDPETALQRTVDSLKRARWARHHLRRPSLGYCICNPLGIWLVTLAAFGGPCPAFLAPLASKAAHVGLLLVNQLSRVRAVCVSVYLIHVLEGVYAYRAAKKAGHRDTAPLWFLQTFVIGFPSIALVNKLKS 865
R LSW+GWGLNR+ + M+F +NL++A VLAG L G + P+ SG+SY +T+G+ P LQ FMDG+L GLDF TSKV+R+PV AL A EL ++ +T+ P + TR+EVR+L E+ I RAR+DLGYEP VD TAL+ V+ LKR W RH L P LGY IC PLGIWL +AAF CPAFLAP+ + ++ L + +L VR VCV L HVLEG YA+ AK+AGH DTAP W +QT ++G+PS LV +L S
Sbjct: 68 RALSWMGWGLNRVTLRGLPEAKSDMIFFQNLIDATVLAGTQLAEGAAGAQAGGAGWSTRKGPACSGQSYCVTDGQRGGGDGDGGGVQPGGLQAFMDGVLEGLDFTTSKVLRLPVFFALAIAWAMELVCKMKLTEAPPSITRSEVRKLVENRCSDIERARKDLGYEPRVDRNTALRTIVEDLKRDGWGRHTLLVPGLGYWICIPLGIWLNAVAAFKALCPAFLAPVQRFSLYIHLAVFRKLWIVRLVCVLAILAHVLEGWYAFVRAKRAGHGDTAPRWLIQTLILGYPSTRLVMRLLS 364
BLAST of mRNA_S-dermatodea_contig12875.1755.1 vs. uniprot
Match: F6I6V9_VITVI (3Beta_HSD domain-containing protein n=3 Tax=Vitis vinifera TaxID=29760 RepID=F6I6V9_VITVI) HSP 1 Score: 102 bits (254), Expect = 1.240e-19 Identity = 82/295 (27.80%), Postives = 139/295 (47.12%), Query Frame = 2
Query: 2 RSIQRVLSWVGWGLNRLAVGAKGAKTGSMVFAENLVEAQVLAGANLMGRITPDAPSGEVEQRPRAPSASGRSYVITNGEPCNLQTFMDGILCGLDFPTSKVVRVPVEVALFTARVAELAYQIGIT-------KRPAWTRAEVRRLTEDSTFSIARAREDLGYEPIVDPETALQRTVDSLKRARWARHHLRRPSLGYCICNPLGIWLVTLAAFG---GPCPAFLAPLASKAAHVGLLLVNQLSRVRAVCVSVYLIHVLEGVYAYRAAKKAGHRDTAPLWFLQTFVIGFPSIALVNK 856
R R++S G+ +G K G ++ +NLV AQ+LA L+ ++ R + P A+G+SY I +G P N+ F+ +L L++ K +PV ALF +R+ + Y + +P AEV ++ FS +A+E+LGY P+V P + T+ + + R L P+L + +G++++ AA+ GP P F A + L + ++ +R V + H+ E VYA+ AK+ + A WF QTF +G S+ + K
Sbjct: 202 RHFPRIISLAKLGVLPFTIGEANVK-GDWIYVDNLVHAQILASMGLLD---------DIPGREKRPIAAGQSYFINDGSPVNIYEFLRPLLRSLEYDLPKA-SLPVPYALFMSRINCMIYTLLYPWLNRWWLPQPLMLPAEVYKVGVTHYFSYLKAKEELGYVPLVSPREGMAATISYWQERK--RRSLEGPTLQTWLFCIIGMFVLFCAAYLPDIGPVPIFRA--------ISLFFLRSMAIIRVVFLLATAAHIGEAVYAWHLAKRVDPAN-ARGWFWQTFALGIFSLRFLLK 474
BLAST of mRNA_S-dermatodea_contig12875.1755.1 vs. uniprot
Match: A0A833QP13_9POAL (Short-chain dehydrogenase/reductase family 42E member 1 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QP13_9POAL) HSP 1 Score: 96.3 bits (238), Expect = 1.350e-17 Identity = 94/301 (31.23%), Postives = 142/301 (47.18%), Query Frame = 2
Query: 2 RSIQRVLSWVGWGLNRLAVGAKGAKTGSMVFAENLVEAQVLAGANLMGRITPDAPSGEVEQRPRAPSASGRSYVITNGEPCNLQTFM-DGILCGLDFPTSKVVRVPVEVALFTARVAELAY--------QIGITKRPAWTRAEVRRLTEDSTFSIARAREDLGYEPIVDPETALQRTVDSLKRARWARHHLRRPSLGYCICNPLGIWLVTLAAFGGPCPAFLAPLA--SKAAHVGLLLVNQLSRVRAVCVSVYLIHVLEGVYAYRAAKKAGHRDTAPLWFLQTFVIGFPSIALVNKLKSES 871
R + R+LS GL +G + KT V+ ENLV A +LA L S E+ + P A+G +Y I++G P N F+ +L L++ K+ V V + LF +R+ Y + +P AEV ++ FSI +ARE+LGY P+V P+ L T+ S R R R L P++ I LGI L T A AFL P+ +GL + + ++ + V +H+ EG YA+ A+K + + WF QT ++GFPS+ L+ K S
Sbjct: 197 RHLPRILSLAKAGLLFFKIGDESIKT-DWVYVENLVHAIILASTGL---------SDEMPGKEGKPIAAGEAYFISDGVPVNTFEFLVHPLLESLEYHVPKIT-VGVPLLLFISRIFLFIYTTILSPFLHLRCVPQPLLLPAEVYKVGITHHFSIQKAREELGYTPLVSPQDGLAMTI-SYWRDRKMRE-LDAPNIFVSIAIILGI-LATFAV------AFLPPVGPIKPILALGLFIFRSVLALKILFVVAVGLHLGEGTYAWFLARKVDPANASG-WFWQTAMLGFPSLRLLLKRSRNS 476
BLAST of mRNA_S-dermatodea_contig12875.1755.1 vs. uniprot
Match: A0A4D8Y827_SALSN (3Beta_HSD domain-containing protein n=3 Tax=Salvia TaxID=21880 RepID=A0A4D8Y827_SALSN) HSP 1 Score: 96.3 bits (238), Expect = 1.360e-17 Identity = 82/292 (28.08%), Postives = 144/292 (49.32%), Query Frame = 2
Query: 2 RSIQRVLSWVGWGLNRLAVGAKGAKTGSMVFAENLVEAQVLAGANLMGRITPDAPSGEVEQRPRAPSASGRSYVITNGEPCNLQTFMDGILCGLDFPTSKVVRVPVEVALFTARVAELAYQI---GITKR----PAWTRAEVRRLTEDSTFSIARAREDLGYEPIVDPETALQRTVDSLKRARWARHHLRRPSLGYCICNPLGIWLVTLAAFGGPCPAFLAPLASKAAHVGLLLVNQLSRVRAVCVSVYLIHVLEGVYAYRAAKKAGHRDTAPLWFLQTFVIGFPSIALVNK 856
R + R++ GL +G K+ V+ +N+V A + A L+G ++ R P A+G++Y I++G P N F+ +L GL++ K+ +PV ALF ++ + Y + + +R P AEV ++ FS +A+E+LGY P+V P+ + T++ K + R L P++ + +G+ ++ AA C L P+ A + L + ++ +RAV H+ EGVYA++ A++ + A WFLQT V+GF S+ + K
Sbjct: 201 RHLPRIIKLAKLGLLPFKIGDTKVKS-DWVYVDNIVLAMLQASMGLLG---------DIPGRVGRPVAAGQAYFISDGSPVNSFEFLRPLLEGLNYDLPKLT-LPVSQALFLGKLISVFYSLLYPCLNQRWLPQPLILPAEVYKVGVTHYFSFLKAKEELGYRPLVSPQEGIAATLEYWKERK--RRTLDGPTIYAWVAVVIGMTMMFCAA----CLPDLGPVPLIRA-ICLFFLRSMTVIRAVFTMAVAAHIGEGVYAWQLARRCDP-ENATGWFLQTVVLGFFSLRFLLK 473
BLAST of mRNA_S-dermatodea_contig12875.1755.1 vs. uniprot
Match: A0A0D6QXP4_ARACU (3Beta_HSD domain-containing protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6QXP4_ARACU) HSP 1 Score: 95.9 bits (237), Expect = 1.830e-17 Identity = 84/291 (28.87%), Postives = 143/291 (49.14%), Query Frame = 2
Query: 2 RSIQRVLSWVGWGLNRLAVGAKGAKTGSMVFAENLVEAQVLAGANLMGRITPDAPSGEVEQRPRAPSASGRSYVITNGEPCNLQTFMDGILCGLD--FPTSKV-VRVPVEVALFTARVAELAY---QIGITKRPAWTRAEVRRLTEDSTFSIARAREDLGYEPIVDPETALQRTVDSLKRARWARHHLRRPSLGYCICNPLGIWLVTLAAFGGPCPAFLAPLASKAAHVGLLLVNQLSRVRAVCVSVYLIHVLEGVYAYRAAKKAGHRDTAPLWFLQTFVIGFPSIALVNK 856
R I R+LS GL +G K V+ +NLV A +LA L+ ++ R P A+G++Y I++G P N F+ ++ L+ FP ++ VR + +A + L Y + +P AEV ++ FSI +A+++LGY PIV PE ++ T+ K + R + RP++ + G++L+ AF ++L PL + G+LL + ++ + L H++E +YAY +++ + A WF QTF +GFPS+ L+ K
Sbjct: 201 RHIPRILSLAQMGLLPFKIGDSRVKN-DWVYVDNLVHALLLASMALLD---------DIPGREGTPIAAGQAYFISDGSPVNSFEFLRPLVVSLEYNFPRKEISVRTALNIAWIFWGIYSLCYPWLKKSWFPQPLIFPAEVYKVGITHYFSILKAKQELGYTPIVKPEEGMKATITYWKEKK--REKVERPNIFAWLFCVGGMFLLLCVAFMPS--SYLGPLVWVKSF-GILLFRSVRNLQILFWLSALTHLIEAIYAYFLSQRVDPAN-AKGWFWQTFALGFPSLRLLLK 475
BLAST of mRNA_S-dermatodea_contig12875.1755.1 vs. uniprot
Match: A0A022R890_ERYGU (3Beta_HSD domain-containing protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022R890_ERYGU) HSP 1 Score: 95.5 bits (236), Expect = 2.370e-17 Identity = 85/295 (28.81%), Postives = 140/295 (47.46%), Query Frame = 2
Query: 2 RSIQRVLSWVGWGLNRLAVGAKGAKTGSMVFAENLVEAQVLAGANLMGRITPDAPSGEVEQRPRAPSASGRSYVITNGEPCNLQTFMDGILCGLDFPTSKVVRVPVEVALFTARVAELAYQI---GITKR----PAWTRAEVRRLTEDSTFSIARAREDLGYEPIVDPETALQRTVDSLKRARWARHHLRRPSLGYCICNPLGIWLVTLAAFG---GPCPAFLAPLASKAAHVGLLLVNQLSRVRAVCVSVYLIHVLEGVYAYRAAKKAGHRDTAPLWFLQTFVIGFPSIALVNK 856
R + R++ GL +G AK+ V+ +NLV +LA L+ ++ R P A+G+ Y I++G P N F+ +L LD+ K +PV AL ++ + Y ++++ P AEV ++ FS +A+E+LGY P+V P+ +Q T+ K + R L P+L I +G+ ++ AA+ GP P F A + L + + VR V + +H+ E VYA++ A+K + A WF QTFV+GF S+ + K
Sbjct: 201 RHLPRIIKLAKLGLLLFKIGETNAKS-DWVYVDNLVLGLLLASMGLLD---------DIPGRTGQPVAAGQPYFISDGYPVNSFEFLRPLLKSLDYDVPKS-SLPVPKALILGKIFWVFYSFLYPWLSRKWLPQPLILPAEVYKVGVSHYFSFLKAKEELGYRPMVSPQKGMQETITYWKERK--RRELDGPTLLTWILVVIGMTILFCAAYMPAYGPVPLFRA--------INLFVFRSIRTVRVVFLVSMALHLGEAVYAWQLARKCDPAN-ARGWFWQTFVLGFFSLRCLLK 473
BLAST of mRNA_S-dermatodea_contig12875.1755.1 vs. uniprot
Match: A0A6J1IIZ5_CUCMA (short-chain dehydrogenase/reductase family 42E member 1-like n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1IIZ5_CUCMA) HSP 1 Score: 92.8 bits (229), Expect = 1.840e-16 Identity = 85/297 (28.62%), Postives = 137/297 (46.13%), Query Frame = 2
Query: 2 RSIQRVLSWVGWGLNRLAVGAKGAKTGSMVFAENLVEAQVLAGANLMGRITPDAPSGEVEQRPRAPSASGRSYVITNGEPCNLQTFMDGIL--CGLDFPTSKVVRVPVEVALFTARVAELAYQIGITKRPAW-------TRAEVRRLTEDSTFSIARAREDLGYEPIVDPETALQRTVDSLKRARWARHHLRRPSLGYCICNPLGIWLVTLAAF---GGPCPAFLAPLASKAAHVGLLLVNQLSRVRAVCVSVYLIHVLEGVYAYRAAKKAGHRDTAPLWFLQTFVIGFPSIALVNK 856
R R++S GL VG AKT ++ +NLV A +LA L+ ++ + AP A+G+ Y +++G P N F+ +L G D P S + PV AL + + Y I W E+ ++ + FS +ARE+LGY P+V P+ + T+ ++ + R L P++ + +G+ ++ AAF GP P F + L + VR V + +L+HV EG YA+ A+K ++ WF QTF +GF S+ L+ K
Sbjct: 202 RHFPRLVSLAKLGLLHFRVGKPSAKT-DWIYVDNLVLALILACVGLLD---------DIPVKGGAPVAAGQPYYVSDGCPVNSYEFIKPLLNSLGYDLPNSYL---PVPKALLLGKFFAVLYTILYPWLDRWWLPHPLMLPPEIYKVGVSNYFSYLKAREELGYVPMVTPKEGMAATISYWQKRK--RKSLDGPTIYAWLFCVVGMSIMFCAAFLPDVGPVPFFKG--------ISLFFFRSIQVVRMVFLIAFLLHVGEGTYAWFLARKVDPANSRG-WFWQTFALGFFSLRLLLK 474
BLAST of mRNA_S-dermatodea_contig12875.1755.1 vs. uniprot
Match: A0A3L6RTP1_PANMI (Short-chain dehydrogenase/reductase family 42E member 1 n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6RTP1_PANMI) HSP 1 Score: 93.2 bits (230), Expect = 1.920e-16 Identity = 90/293 (30.72%), Postives = 132/293 (45.05%), Query Frame = 2
Query: 2 RSIQRVLSWVGWGLNRLAVGAKGAKTGSMVFAENLVEAQVLAGANLMGRITPDAPSGEVEQRPRAPSASGRSYVITNGEPCNLQTFMDGILC-GLDFPTSKVVRVPVEVALFTARV----AELAYQIGITK---RPAWTRAEVRRLTEDSTFSIARAREDLGYEPIVDPETALQRTVDSLKRARWARHHLRRPSLGYCICNPLGIWLVTLAAFGGPCPAFLAPLASKAAHVGLLLVNQLSRVRAVCVSVYLIHVLEGVYAYRAAKKAGHRDTAPLWFLQTFVIGFPSIALVNK 856
R + R+LS GL +G KT V+ +NLV A +LA L+ ++ R P A+G++Y I +G PCN F+ G L L + +V + VAL +R+ + L Y +K +P AEV ++ FS +AR +LGY P+V P L T+ + + RR G I L + + LA F C + PL + L + L +R V + HV E VYA+ AKK R+ A WF QTF +GF S+ + K
Sbjct: 286 RHLPRILSLAKLGLAFFRIGGSDVKT-DWVYIDNLVLALILASMGLLD---------DIPDRKGTPVAAGQAYFICDGSPCNTFEFIIGPLFRSLGYAVPRVT-LDTSVALAISRIFLFMSTLFYPWLDSKWIPQPLILPAEVYKVGVTHYFSFLKARNELGYAPMVSPREGLAATISYWQEQK------RRELDGPTIFTWLAVIIGMLALFSAACLPPVGPL-KWVLDIHLFVFRSLLVIRLVFAAAVAAHVGEAVYAWFLAKKVDPRNAAG-WFWQTFALGFFSLQYLLK 559 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12875.1755.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig12875.1755.1 >prot_S-dermatodea_contig12875.1755.1 ID=prot_S-dermatodea_contig12875.1755.1|Name=mRNA_S-dermatodea_contig12875.1755.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=264bp MVFAENLVEAQVLAGANLMGRITPDAPSGEVEQRPRAPSASGRSYVITNGback to top mRNA from alignment at S-dermatodea_contig12875:55..3425- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig12875.1755.1 ID=mRNA_S-dermatodea_contig12875.1755.1|Name=mRNA_S-dermatodea_contig12875.1755.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3371bp|location=Sequence derived from alignment at S-dermatodea_contig12875:55..3425- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig12875:55..3425- >mRNA_S-dermatodea_contig12875.1755.1 ID=mRNA_S-dermatodea_contig12875.1755.1|Name=mRNA_S-dermatodea_contig12875.1755.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1584bp|location=Sequence derived from alignment at S-dermatodea_contig12875:55..3425- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |