mRNA_S-dermatodea_contig12875.1755.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig12875.1755.1
Unique NamemRNA_S-dermatodea_contig12875.1755.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig12875.1755.1 vs. uniprot
Match: A0A6H5JET5_9PHAE (3Beta_HSD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET5_9PHAE)

HSP 1 Score: 313 bits (801), Expect = 1.620e-97
Identity = 174/308 (56.49%), Postives = 208/308 (67.53%), Query Frame = 2
Query:    8 IQRVLSWVGWGLNRLAVGAKGAKTGS----MVFAENLVEAQVLAGANLMGRITPDAPSGEV-----------EQR-------PRAPSASGRSYVITNGEPCNLQTFMDGILCGLDFPTSKVVRVPVEVALFTARVAELAYQIGITKRPAWTRAEVRRLTEDS-TFSIARAREDLGYEPIVDPETALQRTVDSLKRARWARHHLRRPSLGYCICNPLGIWLVTLAAFGGPCPAFLAPLASKAAHVGLLLVNQLSRVRAVCVSVYLIHVLEGVYAYRAAKKAGHRDTAPLWFLQTFVIGFPSIALVNKLK 862
            + R L WVGWGLNR+AVG K  + G     MV  +NL EA +LAGA L  R   DAP+  V           EQR         AP+ +GR+Y +T+G+P N Q F+D IL GL F TSK++RVP  VAL  ARVAEL  ++GIT  PA TR+++R LTE   T S ARA+ D GY P VDP TA +RTV+SLKR  WARH +RRP+L Y I NP GIWLVTLAAFGGPCP F   LA  A HVGL L+ + S VRAVC++VYL+HVLEGVYA+R A  AGHRD AP WF QTF++GFPS+ LVN LK
Sbjct:  174 LHRALLWVGWGLNRVAVGPKCPEDGGVKVDMVHVDNLAEAHLLAGAKLKKRAETDAPNAMVDVGAGVEGADAEQRRGPGSKSEAAPACAGRAYDVTDGQPRNPQAFLDEILDGLGFATSKLLRVPTSVALLVARVAELLCKVGITTAPALTRSDIRGLTEARRTHSNARAQRDFGYVPRVDPATATKRTVESLKRDGWARHRVRRPALAYWITNPGGIWLVTLAAFGGPCPPFTEALARSAGHVGLRLLKEQSTVRAVCIAVYLVHVLEGVYAFRVAWHAGHRDAAPGWFAQTFLLGFPSVFLVNDLK 481          
BLAST of mRNA_S-dermatodea_contig12875.1755.1 vs. uniprot
Match: D7FV37_ECTSI (3Beta_HSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV37_ECTSI)

HSP 1 Score: 310 bits (793), Expect = 9.380e-97
Identity = 173/309 (55.99%), Postives = 211/309 (68.28%), Query Frame = 2
Query:    8 IQRVLSWVGWGLNRLAVGAKGAKTGS----MVFAENLVEAQVLAGANLMG-RITPDAPSGEV-----------EQR-------PRAPSASGRSYVITNGEPCNLQTFMDGILCGLDFPTSKVVRVPVEVALFTARVAELAYQIGITKRPAWTRAEVRRLTEDS-TFSIARAREDLGYEPIVDPETALQRTVDSLKRARWARHHLRRPSLGYCICNPLGIWLVTLAAFGGPCPAFLAPLASKAAHVGLLLVNQLSRVRAVCVSVYLIHVLEGVYAYRAAKKAGHRDTAPLWFLQTFVIGFPSIALVNKLK 862
            + R LSWVGWGL+R+AVG K  + G     MV  +NL EA +LAGA L   R   DAP+  V           EQR         AP+ +G++Y +T+G+P N Q F+D IL GL F TSK++RVP  VAL  A VAEL  ++GIT  PA TR+++R LTE   T S ARA+ D GY P VDP  A++RTV+SLKR  WARH +RRP+L Y I NP GIWLVTLAAFGGPCPAF  PLA  A HVGL L+ + S VRAVC++VYL+HVLEGVYA+R A+ AGHRD AP WF QTF++GFPS+ LVN LK
Sbjct:  139 LHRALSWVGWGLDRVAVGPKCPEDGGVKVDMVHLDNLAEAHLLAGARLKKKRAETDAPNAMVDVGADVGGAAAEQRRGPGSKTEAAPACAGKAYDVTDGQPRNPQAFLDEILDGLGFATSKLLRVPTTVALLAAWVAELLCKVGITTAPALTRSDIRGLTEARRTHSNARAQRDFGYVPRVDPAAAIKRTVESLKRDGWARHRVRRPALAYWITNPGGIWLVTLAAFGGPCPAFAEPLARSAGHVGLRLLKEQSTVRAVCIAVYLVHVLEGVYAFRVARHAGHRDAAPGWFAQTFLLGFPSVFLVNDLK 447          
BLAST of mRNA_S-dermatodea_contig12875.1755.1 vs. uniprot
Match: D8LSA6_ECTSI (3Beta_HSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSA6_ECTSI)

HSP 1 Score: 246 bits (629), Expect = 1.160e-73
Identity = 140/297 (47.14%), Postives = 181/297 (60.94%), Query Frame = 2
Query:   14 RVLSWVGWGLNRLAVGAKGAKTGSMVFAENLVEAQVLAGANLMGRITPDAPSGEVEQRPRAPSASGRSYVITNGE------------PCNLQTFMDGILCGLDFPTSKVVRVPVEVALFTARVAELAYQIGITKRP-AWTRAEVRRLTEDSTFSIARAREDLGYEPIVDPETALQRTVDSLKRARWARHHLRRPSLGYCICNPLGIWLVTLAAFGGPCPAFLAPLASKAAHVGLLLVNQLSRVRAVCVSVYLIHVLEGVYAYRAAKKAGHRDTAPLWFLQTFVIGFPSIALVNKLKS 865
            R LSW+GWGLNR+ +         M+F +NL++A VLAG  L          G      + P+ SG+SY +T+G+            P  LQ FMDG+L GLDF TSKV+R+PV  AL  A   EL  ++ +T+ P + TR+EVR+L E+    I RAR+DLGYEP VD  TAL+  V+ LKR  W RH L  P LGY IC PLGIWL  +AAF   CPAFLAP+   + ++ L +  +L  VR VCV   L HVLEG YA+  AK+AGH DTAP W +QT ++G+PS  LV +L S
Sbjct:   68 RALSWMGWGLNRVTLRGLPEAKSDMIFFQNLIDATVLAGTQLAEGAAGAQAGGAGWSTRKGPACSGQSYCVTDGQRGGGDGDGGGVQPGGLQAFMDGVLEGLDFTTSKVLRLPVFFALAIAWAMELVCKMKLTEAPPSITRSEVRKLVENRCSDIERARKDLGYEPRVDRNTALRTIVEDLKRDGWGRHTLLVPGLGYWICIPLGIWLNAVAAFKALCPAFLAPVQRFSLYIHLAVFRKLWIVRLVCVLAILAHVLEGWYAFVRAKRAGHGDTAPRWLIQTLILGYPSTRLVMRLLS 364          
BLAST of mRNA_S-dermatodea_contig12875.1755.1 vs. uniprot
Match: F6I6V9_VITVI (3Beta_HSD domain-containing protein n=3 Tax=Vitis vinifera TaxID=29760 RepID=F6I6V9_VITVI)

HSP 1 Score: 102 bits (254), Expect = 1.240e-19
Identity = 82/295 (27.80%), Postives = 139/295 (47.12%), Query Frame = 2
Query:    2 RSIQRVLSWVGWGLNRLAVGAKGAKTGSMVFAENLVEAQVLAGANLMGRITPDAPSGEVEQRPRAPSASGRSYVITNGEPCNLQTFMDGILCGLDFPTSKVVRVPVEVALFTARVAELAYQIGIT-------KRPAWTRAEVRRLTEDSTFSIARAREDLGYEPIVDPETALQRTVDSLKRARWARHHLRRPSLGYCICNPLGIWLVTLAAFG---GPCPAFLAPLASKAAHVGLLLVNQLSRVRAVCVSVYLIHVLEGVYAYRAAKKAGHRDTAPLWFLQTFVIGFPSIALVNK 856
            R   R++S    G+    +G    K G  ++ +NLV AQ+LA   L+          ++  R + P A+G+SY I +G P N+  F+  +L  L++   K   +PV  ALF +R+  + Y +           +P    AEV ++     FS  +A+E+LGY P+V P   +  T+   +  +  R  L  P+L   +   +G++++  AA+    GP P F A        + L  +  ++ +R V +     H+ E VYA+  AK+    + A  WF QTF +G  S+  + K
Sbjct:  202 RHFPRIISLAKLGVLPFTIGEANVK-GDWIYVDNLVHAQILASMGLLD---------DIPGREKRPIAAGQSYFINDGSPVNIYEFLRPLLRSLEYDLPKA-SLPVPYALFMSRINCMIYTLLYPWLNRWWLPQPLMLPAEVYKVGVTHYFSYLKAKEELGYVPLVSPREGMAATISYWQERK--RRSLEGPTLQTWLFCIIGMFVLFCAAYLPDIGPVPIFRA--------ISLFFLRSMAIIRVVFLLATAAHIGEAVYAWHLAKRVDPAN-ARGWFWQTFALGIFSLRFLLK 474          
BLAST of mRNA_S-dermatodea_contig12875.1755.1 vs. uniprot
Match: A0A833QP13_9POAL (Short-chain dehydrogenase/reductase family 42E member 1 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QP13_9POAL)

HSP 1 Score: 96.3 bits (238), Expect = 1.350e-17
Identity = 94/301 (31.23%), Postives = 142/301 (47.18%), Query Frame = 2
Query:    2 RSIQRVLSWVGWGLNRLAVGAKGAKTGSMVFAENLVEAQVLAGANLMGRITPDAPSGEVEQRPRAPSASGRSYVITNGEPCNLQTFM-DGILCGLDFPTSKVVRVPVEVALFTARVAELAY--------QIGITKRPAWTRAEVRRLTEDSTFSIARAREDLGYEPIVDPETALQRTVDSLKRARWARHHLRRPSLGYCICNPLGIWLVTLAAFGGPCPAFLAPLA--SKAAHVGLLLVNQLSRVRAVCVSVYLIHVLEGVYAYRAAKKAGHRDTAPLWFLQTFVIGFPSIALVNKLKSES 871
            R + R+LS    GL    +G +  KT   V+ ENLV A +LA   L         S E+  +   P A+G +Y I++G P N   F+   +L  L++   K+  V V + LF +R+    Y         +    +P    AEV ++     FSI +ARE+LGY P+V P+  L  T+ S  R R  R  L  P++   I   LGI L T A       AFL P+        +GL +   +  ++ + V    +H+ EG YA+  A+K    + +  WF QT ++GFPS+ L+ K    S
Sbjct:  197 RHLPRILSLAKAGLLFFKIGDESIKT-DWVYVENLVHAIILASTGL---------SDEMPGKEGKPIAAGEAYFISDGVPVNTFEFLVHPLLESLEYHVPKIT-VGVPLLLFISRIFLFIYTTILSPFLHLRCVPQPLLLPAEVYKVGITHHFSIQKAREELGYTPLVSPQDGLAMTI-SYWRDRKMRE-LDAPNIFVSIAIILGI-LATFAV------AFLPPVGPIKPILALGLFIFRSVLALKILFVVAVGLHLGEGTYAWFLARKVDPANASG-WFWQTAMLGFPSLRLLLKRSRNS 476          
BLAST of mRNA_S-dermatodea_contig12875.1755.1 vs. uniprot
Match: A0A4D8Y827_SALSN (3Beta_HSD domain-containing protein n=3 Tax=Salvia TaxID=21880 RepID=A0A4D8Y827_SALSN)

HSP 1 Score: 96.3 bits (238), Expect = 1.360e-17
Identity = 82/292 (28.08%), Postives = 144/292 (49.32%), Query Frame = 2
Query:    2 RSIQRVLSWVGWGLNRLAVGAKGAKTGSMVFAENLVEAQVLAGANLMGRITPDAPSGEVEQRPRAPSASGRSYVITNGEPCNLQTFMDGILCGLDFPTSKVVRVPVEVALFTARVAELAYQI---GITKR----PAWTRAEVRRLTEDSTFSIARAREDLGYEPIVDPETALQRTVDSLKRARWARHHLRRPSLGYCICNPLGIWLVTLAAFGGPCPAFLAPLASKAAHVGLLLVNQLSRVRAVCVSVYLIHVLEGVYAYRAAKKAGHRDTAPLWFLQTFVIGFPSIALVNK 856
            R + R++     GL    +G    K+   V+ +N+V A + A   L+G         ++  R   P A+G++Y I++G P N   F+  +L GL++   K+  +PV  ALF  ++  + Y +    + +R    P    AEV ++     FS  +A+E+LGY P+V P+  +  T++  K  +  R  L  P++   +   +G+ ++  AA    C   L P+    A + L  +  ++ +RAV       H+ EGVYA++ A++    + A  WFLQT V+GF S+  + K
Sbjct:  201 RHLPRIIKLAKLGLLPFKIGDTKVKS-DWVYVDNIVLAMLQASMGLLG---------DIPGRVGRPVAAGQAYFISDGSPVNSFEFLRPLLEGLNYDLPKLT-LPVSQALFLGKLISVFYSLLYPCLNQRWLPQPLILPAEVYKVGVTHYFSFLKAKEELGYRPLVSPQEGIAATLEYWKERK--RRTLDGPTIYAWVAVVIGMTMMFCAA----CLPDLGPVPLIRA-ICLFFLRSMTVIRAVFTMAVAAHIGEGVYAWQLARRCDP-ENATGWFLQTVVLGFFSLRFLLK 473          
BLAST of mRNA_S-dermatodea_contig12875.1755.1 vs. uniprot
Match: A0A0D6QXP4_ARACU (3Beta_HSD domain-containing protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6QXP4_ARACU)

HSP 1 Score: 95.9 bits (237), Expect = 1.830e-17
Identity = 84/291 (28.87%), Postives = 143/291 (49.14%), Query Frame = 2
Query:    2 RSIQRVLSWVGWGLNRLAVGAKGAKTGSMVFAENLVEAQVLAGANLMGRITPDAPSGEVEQRPRAPSASGRSYVITNGEPCNLQTFMDGILCGLD--FPTSKV-VRVPVEVALFTARVAELAY---QIGITKRPAWTRAEVRRLTEDSTFSIARAREDLGYEPIVDPETALQRTVDSLKRARWARHHLRRPSLGYCICNPLGIWLVTLAAFGGPCPAFLAPLASKAAHVGLLLVNQLSRVRAVCVSVYLIHVLEGVYAYRAAKKAGHRDTAPLWFLQTFVIGFPSIALVNK 856
            R I R+LS    GL    +G    K    V+ +NLV A +LA   L+          ++  R   P A+G++Y I++G P N   F+  ++  L+  FP  ++ VR  + +A     +  L Y   +     +P    AEV ++     FSI +A+++LGY PIV PE  ++ T+   K  +  R  + RP++   +    G++L+   AF     ++L PL    +  G+LL   +  ++ +     L H++E +YAY  +++    + A  WF QTF +GFPS+ L+ K
Sbjct:  201 RHIPRILSLAQMGLLPFKIGDSRVKN-DWVYVDNLVHALLLASMALLD---------DIPGREGTPIAAGQAYFISDGSPVNSFEFLRPLVVSLEYNFPRKEISVRTALNIAWIFWGIYSLCYPWLKKSWFPQPLIFPAEVYKVGITHYFSILKAKQELGYTPIVKPEEGMKATITYWKEKK--REKVERPNIFAWLFCVGGMFLLLCVAFMPS--SYLGPLVWVKSF-GILLFRSVRNLQILFWLSALTHLIEAIYAYFLSQRVDPAN-AKGWFWQTFALGFPSLRLLLK 475          
BLAST of mRNA_S-dermatodea_contig12875.1755.1 vs. uniprot
Match: A0A022R890_ERYGU (3Beta_HSD domain-containing protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022R890_ERYGU)

HSP 1 Score: 95.5 bits (236), Expect = 2.370e-17
Identity = 85/295 (28.81%), Postives = 140/295 (47.46%), Query Frame = 2
Query:    2 RSIQRVLSWVGWGLNRLAVGAKGAKTGSMVFAENLVEAQVLAGANLMGRITPDAPSGEVEQRPRAPSASGRSYVITNGEPCNLQTFMDGILCGLDFPTSKVVRVPVEVALFTARVAELAYQI---GITKR----PAWTRAEVRRLTEDSTFSIARAREDLGYEPIVDPETALQRTVDSLKRARWARHHLRRPSLGYCICNPLGIWLVTLAAFG---GPCPAFLAPLASKAAHVGLLLVNQLSRVRAVCVSVYLIHVLEGVYAYRAAKKAGHRDTAPLWFLQTFVIGFPSIALVNK 856
            R + R++     GL    +G   AK+   V+ +NLV   +LA   L+          ++  R   P A+G+ Y I++G P N   F+  +L  LD+   K   +PV  AL   ++  + Y      ++++    P    AEV ++     FS  +A+E+LGY P+V P+  +Q T+   K  +  R  L  P+L   I   +G+ ++  AA+    GP P F A        + L +   +  VR V +    +H+ E VYA++ A+K    + A  WF QTFV+GF S+  + K
Sbjct:  201 RHLPRIIKLAKLGLLLFKIGETNAKS-DWVYVDNLVLGLLLASMGLLD---------DIPGRTGQPVAAGQPYFISDGYPVNSFEFLRPLLKSLDYDVPKS-SLPVPKALILGKIFWVFYSFLYPWLSRKWLPQPLILPAEVYKVGVSHYFSFLKAKEELGYRPMVSPQKGMQETITYWKERK--RRELDGPTLLTWILVVIGMTILFCAAYMPAYGPVPLFRA--------INLFVFRSIRTVRVVFLVSMALHLGEAVYAWQLARKCDPAN-ARGWFWQTFVLGFFSLRCLLK 473          
BLAST of mRNA_S-dermatodea_contig12875.1755.1 vs. uniprot
Match: A0A6J1IIZ5_CUCMA (short-chain dehydrogenase/reductase family 42E member 1-like n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1IIZ5_CUCMA)

HSP 1 Score: 92.8 bits (229), Expect = 1.840e-16
Identity = 85/297 (28.62%), Postives = 137/297 (46.13%), Query Frame = 2
Query:    2 RSIQRVLSWVGWGLNRLAVGAKGAKTGSMVFAENLVEAQVLAGANLMGRITPDAPSGEVEQRPRAPSASGRSYVITNGEPCNLQTFMDGIL--CGLDFPTSKVVRVPVEVALFTARVAELAYQIGITKRPAW-------TRAEVRRLTEDSTFSIARAREDLGYEPIVDPETALQRTVDSLKRARWARHHLRRPSLGYCICNPLGIWLVTLAAF---GGPCPAFLAPLASKAAHVGLLLVNQLSRVRAVCVSVYLIHVLEGVYAYRAAKKAGHRDTAPLWFLQTFVIGFPSIALVNK 856
            R   R++S    GL    VG   AKT   ++ +NLV A +LA   L+          ++  +  AP A+G+ Y +++G P N   F+  +L   G D P S +   PV  AL   +   + Y I       W          E+ ++   + FS  +ARE+LGY P+V P+  +  T+   ++ +  R  L  P++   +   +G+ ++  AAF    GP P F          + L     +  VR V +  +L+HV EG YA+  A+K    ++   WF QTF +GF S+ L+ K
Sbjct:  202 RHFPRLVSLAKLGLLHFRVGKPSAKT-DWIYVDNLVLALILACVGLLD---------DIPVKGGAPVAAGQPYYVSDGCPVNSYEFIKPLLNSLGYDLPNSYL---PVPKALLLGKFFAVLYTILYPWLDRWWLPHPLMLPPEIYKVGVSNYFSYLKAREELGYVPMVTPKEGMAATISYWQKRK--RKSLDGPTIYAWLFCVVGMSIMFCAAFLPDVGPVPFFKG--------ISLFFFRSIQVVRMVFLIAFLLHVGEGTYAWFLARKVDPANSRG-WFWQTFALGFFSLRLLLK 474          
BLAST of mRNA_S-dermatodea_contig12875.1755.1 vs. uniprot
Match: A0A3L6RTP1_PANMI (Short-chain dehydrogenase/reductase family 42E member 1 n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6RTP1_PANMI)

HSP 1 Score: 93.2 bits (230), Expect = 1.920e-16
Identity = 90/293 (30.72%), Postives = 132/293 (45.05%), Query Frame = 2
Query:    2 RSIQRVLSWVGWGLNRLAVGAKGAKTGSMVFAENLVEAQVLAGANLMGRITPDAPSGEVEQRPRAPSASGRSYVITNGEPCNLQTFMDGILC-GLDFPTSKVVRVPVEVALFTARV----AELAYQIGITK---RPAWTRAEVRRLTEDSTFSIARAREDLGYEPIVDPETALQRTVDSLKRARWARHHLRRPSLGYCICNPLGIWLVTLAAFGGPCPAFLAPLASKAAHVGLLLVNQLSRVRAVCVSVYLIHVLEGVYAYRAAKKAGHRDTAPLWFLQTFVIGFPSIALVNK 856
            R + R+LS    GL    +G    KT   V+ +NLV A +LA   L+          ++  R   P A+G++Y I +G PCN   F+ G L   L +   +V  +   VAL  +R+    + L Y    +K   +P    AEV ++     FS  +AR +LGY P+V P   L  T+   +  +      RR   G  I   L + +  LA F   C   + PL      + L +   L  +R V  +    HV E VYA+  AKK   R+ A  WF QTF +GF S+  + K
Sbjct:  286 RHLPRILSLAKLGLAFFRIGGSDVKT-DWVYIDNLVLALILASMGLLD---------DIPDRKGTPVAAGQAYFICDGSPCNTFEFIIGPLFRSLGYAVPRVT-LDTSVALAISRIFLFMSTLFYPWLDSKWIPQPLILPAEVYKVGVTHYFSFLKARNELGYAPMVSPREGLAATISYWQEQK------RRELDGPTIFTWLAVIIGMLALFSAACLPPVGPL-KWVLDIHLFVFRSLLVIRLVFAAAVAAHVGEAVYAWFLAKKVDPRNAAG-WFWQTFALGFFSLQYLLK 559          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12875.1755.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JET5_9PHAE1.620e-9756.493Beta_HSD domain-containing protein n=1 Tax=Ectoca... [more]
D7FV37_ECTSI9.380e-9755.993Beta_HSD domain-containing protein n=1 Tax=Ectoca... [more]
D8LSA6_ECTSI1.160e-7347.143Beta_HSD domain-containing protein n=1 Tax=Ectoca... [more]
F6I6V9_VITVI1.240e-1927.803Beta_HSD domain-containing protein n=3 Tax=Vitis ... [more]
A0A833QP13_9POAL1.350e-1731.23Short-chain dehydrogenase/reductase family 42E mem... [more]
A0A4D8Y827_SALSN1.360e-1728.083Beta_HSD domain-containing protein n=3 Tax=Salvia... [more]
A0A0D6QXP4_ARACU1.830e-1728.873Beta_HSD domain-containing protein n=1 Tax=Arauca... [more]
A0A022R890_ERYGU2.370e-1728.813Beta_HSD domain-containing protein n=1 Tax=Erythr... [more]
A0A6J1IIZ5_CUCMA1.840e-1628.62short-chain dehydrogenase/reductase family 42E mem... [more]
A0A3L6RTP1_PANMI1.920e-1630.72Short-chain dehydrogenase/reductase family 42E mem... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12875contigS-dermatodea_contig12875:55..3425 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score288.1
Seed ortholog evalue4.1e-75
Seed eggNOG ortholog2880.D7FV37
EggNOG free text desc.3-beta-hydroxy-delta5-steroid dehydrogenase activity
EggNOG OGsCOG0451@1,KOG1430@2759
COG Functional cat.GM
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein of unknown function DUF4499
Ec32 orthologEc-12_005040.1
Exons6
Model size1536
Cds size792
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12875.1755.1prot_S-dermatodea_contig12875.1755.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig12875 714..3340 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924265.5491395-UTR-S-dermatodea_contig12875:54..7131622924265.5491395-UTR-S-dermatodea_contig12875:54..713Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12875 55..713 -
1694079136.1405241-UTR-S-dermatodea_contig12875:54..7131694079136.1405241-UTR-S-dermatodea_contig12875:54..713Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12875 55..713 -
1622924265.6143782-UTR-S-dermatodea_contig12875:3340..34251622924265.6143782-UTR-S-dermatodea_contig12875:3340..3425Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12875 3341..3425 -
1694079136.208342-UTR-S-dermatodea_contig12875:3340..34251694079136.208342-UTR-S-dermatodea_contig12875:3340..3425Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12875 3341..3425 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924265.5617473-CDS-S-dermatodea_contig12875:713..9311622924265.5617473-CDS-S-dermatodea_contig12875:713..931Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12875 714..931 -
1694079136.150901-CDS-S-dermatodea_contig12875:713..9311694079136.150901-CDS-S-dermatodea_contig12875:713..931Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12875 714..931 -
1622924265.5708628-CDS-S-dermatodea_contig12875:1364..15491622924265.5708628-CDS-S-dermatodea_contig12875:1364..1549Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12875 1365..1549 -
1694079136.1594634-CDS-S-dermatodea_contig12875:1364..15491694079136.1594634-CDS-S-dermatodea_contig12875:1364..1549Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12875 1365..1549 -
1622924265.5791764-CDS-S-dermatodea_contig12875:1844..19541622924265.5791764-CDS-S-dermatodea_contig12875:1844..1954Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12875 1845..1954 -
1694079136.1698663-CDS-S-dermatodea_contig12875:1844..19541694079136.1698663-CDS-S-dermatodea_contig12875:1844..1954Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12875 1845..1954 -
1622924265.5873559-CDS-S-dermatodea_contig12875:2301..23811622924265.5873559-CDS-S-dermatodea_contig12875:2301..2381Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12875 2302..2381 -
1694079136.1800246-CDS-S-dermatodea_contig12875:2301..23811694079136.1800246-CDS-S-dermatodea_contig12875:2301..2381Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12875 2302..2381 -
1622924265.5956373-CDS-S-dermatodea_contig12875:2746..29241622924265.5956373-CDS-S-dermatodea_contig12875:2746..2924Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12875 2747..2924 -
1694079136.1895728-CDS-S-dermatodea_contig12875:2746..29241694079136.1895728-CDS-S-dermatodea_contig12875:2746..2924Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12875 2747..2924 -
1622924265.6042676-CDS-S-dermatodea_contig12875:3319..33401622924265.6042676-CDS-S-dermatodea_contig12875:3319..3340Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12875 3320..3340 -
1694079136.198879-CDS-S-dermatodea_contig12875:3319..33401694079136.198879-CDS-S-dermatodea_contig12875:3319..3340Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12875 3320..3340 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig12875.1755.1

>prot_S-dermatodea_contig12875.1755.1 ID=prot_S-dermatodea_contig12875.1755.1|Name=mRNA_S-dermatodea_contig12875.1755.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=264bp
MVFAENLVEAQVLAGANLMGRITPDAPSGEVEQRPRAPSASGRSYVITNG
EPCNLQTFMDGILCGLDFPTSKVVRVPVEVALFTARVAELAYQIGITKRP
AWTRAEVRRLTEDSTFSIARAREDLGYEPIVDPETALQRTVDSLKRARWA
RHHLRRPSLGYCICNPLGIWLVTLAAFGGPCPAFLAPLASKAAHVGLLLV
NQLSRVRAVCVSVYLIHVLEGVYAYRAAKKAGHRDTAPLWFLQTFVIGFP
SIALVNKLKSESV*
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mRNA from alignment at S-dermatodea_contig12875:55..3425-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig12875.1755.1 ID=mRNA_S-dermatodea_contig12875.1755.1|Name=mRNA_S-dermatodea_contig12875.1755.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3371bp|location=Sequence derived from alignment at S-dermatodea_contig12875:55..3425- (Saccorhiza dermatodea SderLu1190fm monoicous)
CAGGTCGATACAAAGGGTGTTGTCATGGGTGGGGTGGGGACTGAATCGAT TGGCGGTGGGGGCGAAGGGCGCCAAGACGGGCAGCATGGTGTTTGCTGAA AACCTCGTGAGCTTTCATCTGGCCGTCGTGAGGCGATACCTCGTACAAAC TTCAACAGTTCGCGCCTCATACTGACGATTCTTGCCGGCACGCAGGTCTA TCCCTCATCAAATAGTGTTCACAAAGGAAAAGCAGTAATGCCTTCATATG ACAGTATTCGTGTGCTTGTAATGTGTTATCCAATCTATCAATCTATCAAT CTATTGTACTGAGCTAAGAAAAGTAGCCACAAGTATGACCAGATCTTGGA CCGTTTCAACAGCATCGACGTTTTCCTTCACGGCCGGTCCTTCATCAGGT AGAAGATCCCTGCCACGAAGCACGCCACGTAAAAAAACAAGCGCATGTTT CACAGCAACTCCTGTGGGGCTCCCCTCTCCTTCCTCTCCTTACTTTTATA GGTAGAAGCTCAGGTGCTGGCAGGCGCAAATCTCATGGGGAGGATAACGC CAGATGCACCGTCAGGAGAGGTAGAGCAGCGCCCTAGAGCCCCATCAGCA TCCGGGCGGTCGTACGTTATAACTAACGGAGAACCCTGCAACCTCCAAAC GTTTATGGACGGCATCCTGTGCGGCCTCGGTGAGCGCTTGTTGGGGGTGG GGAGGGGGGAAACGCCCGTCGTTGTGGGCCGTCGAAGCCATATCGGACGA AAAAAAAGGCGGCAACGTGGCCTTGCTCGATTTGGAATATCCCCGGAAAA GTCGCATTGGGTATGGTATATACACGGCGGTTACCTTTCCCTCCCTTTGG GCCCAGTGGGCGGGAGACGTTCAGCTTCTCGCCACAAATGCACGTCCCAT TGTTGTTTGTTTGTCCCGTTGTTTTCGCGAGCGCCGTTGTCGTGGAAACG CTGATACGGCGGTTGGTCTCGTCGCTAGGATAGCCAGGTTTTGCTTTTAA CATCTGAGGGTCAAAATCCCCGAACCTGATCGTGCTCTGGACAGATTTTC CGACATCCAAGGTTGTTCGCGTGCCGGTTGAGGTGGCCCTATTTACCGCT CGGGTGGCTGAACTAGCATATCAGGTGAGGGGCCGTCTCGGTAGAGGCAC GGTTAGGGTATTCGTATCGGAGATTGTGCTGCGCATGTAACCTCCCCACT ACCTTCGCCTCTAGGCCGGAGGGCGCGTCCTACCGCACAGCAAAGGTTTC CGCATCTTCCAACAGGATCGTATCAGCTCGTGAATCCCGTCTCCTGCATT TCACAGACGAAACAGATCGACACGCACATAAAAAATCGCAACATATTTCC CCGGTAACCCCAACCTCGCCTCGATCATGAGTTGTAGCGGGCACCTTTCC CCCGCTGTCGCGTTTTAGGATATCTGATAACTCCGGCACTCCTCTCCCCC CGACTCGCTGTCCCGTTGAAGATAGGAATAACGAAGAGACCGGCCTGGAC TCGGGCGGAAGTGCGACGCCTTACCGAGGATAGCACGTTCAGCATAGCTC GGGCCCGGGAGGACCTGGGATACGAGCCCATGTGCGTTTGCGCGTCCGTT GATGGTCGTCGATGCTGCTGCCACTCGTTCACCGTGCCGTTGTGTTTCTT CGGTGTCATGGCAGTCACACATCGGGAGACGCGTGGATCCAGTAGTTTAT CTCAACCTGGGGGATCAGGCGTTCACGCTCGAAGCTAGGTGTTCATTGGT CGATGGAGCGCGGGCGTGCGCGTGTATCAGACCAATCTGTGTCTGGTCTG CATATATATATACCGATTCTCGACGTAAAGTTCCTTCTCGCAACGCCCCC TGCTCGTACCTCCTCGAAAAATCCAGCGTTGACCCGGAGACTGCCCTGCA GCGCACCGTGGACTCGTTGAAACGCGCCAGATGGGCGAGACATCACTTAC GGAGGCCAAGCCTCGGATACTGCATTTGCAATCCTCTAGGCATCTGGTTG GTGACCCTCGCTGCTTTCGGAGGGCCTTGTCCAGCCTTTTTGGCACCACT GGCCAGCAAAGGTGAGGGGGCGTTGTTGTGGACGTGGCGGAAGGGCATGG GCTTGAAAGCGTAGCCCCGCGCGGAGCACTCAGTGTCGCGGCCGATCCAT TTGAGTGCGCGAGGCATGTTGTTTGTTTTCCGGCCGTACGACCGATACTT TTGTCGTTGCTCTCCGCATGCTGCTGCTCCTGTGGACGTGAATCAACTGA TATTTCGGTGCTCGTTCGCGTTTTTATTTTACTGACTTGTCCTTTCCTGT CAAATCAGATCTAGACCCTACGCACCATGCCGCGGTGTTGACCAAGTTTT GTTGCTTTGACGCACCGGCTTTGATTGACGTGTCGCTGCTATGTGCTATT CCTCCCCTCTGTCCCGCCTGGCACGCCCCGGCCTTATGTCCGTGTGTACC TGATACCGTCGTCCCCCACTCTCTCAATTGCTACTGTACCGCAGCGGCGC ACGTCGGGCTCCTGCTGGTCAACCAGTTGTCGAGAGTGCGCGCGGTGTGC GTGTCAGTCTACCTGATCCACGTGCTGGAGGGTGTCTACGCCTACAGGGC TGCGAAAAAGGCCGGCCACAGGGACACCGCGCCGCTTTGGTTCCTTCAGA CCTTTGTAATCGGGTTCCCGTCCATTGCCTTGGTGAATAAGCTCAAGTCG GAGAGCGTTTGACGTTTCAATCGTAACCTTTTGATTGATTTGGTTGGTTT CACAGGATTGAACAGATGCGAGCAAGGTAGTGCTCAGCTGTGCGGTGCAT GTGTGGCATTATATACTGCAGTTACGTAGTGGGTCGCGAAGAAGGCCACG TCAGGCTTGTTATGTGTTCGTTTTGCTTGTTTAATATCTCGTTCTCCCGA GAAGCCCCGAGGTGTCTTGTAGTAAAACATACAGTACCATTGTAACATTT ACTTGAAGGTTGGTTTTTTATGGTTGCGAATCGCGCGGCGCGATGTTCAC GGATAAAATCGTGAATCACGACCAGCCGTGCTGCTCGTTCGGACTACATC ATGCGGCCACGGCCACACACATGCGCGGAGATATTAGTCACAGACATTTG AAAAAAATCTCAATCGGCGCGCTGCGGAAGTGCCGAACCCAATGCGCGAT AAAAAATCTAAGGTAGGAACCGGGCAGAGATGGGATGGTCCTTTGTGACC ACAGAGCCTGACGGGATTCGGGAGAAGCCGGTCTGTCGTATGTATGTACT TCGAGTATATGCCATTATGTGTGCGAAAGAAAATAGCTAATAAAACTAGT CCTCCCATCGACGCACCGACGCCCACGTATTTAGTACATATCATACGTAA ACACTATCTATGAGCAAGCAA
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Coding sequence (CDS) from alignment at S-dermatodea_contig12875:55..3425-

>mRNA_S-dermatodea_contig12875.1755.1 ID=mRNA_S-dermatodea_contig12875.1755.1|Name=mRNA_S-dermatodea_contig12875.1755.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1584bp|location=Sequence derived from alignment at S-dermatodea_contig12875:55..3425- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGTGTTTGCTGAAAACCTCATGGTGTTTGCTGAAAACCTCGTAGAAGC
TCAGGTGCTGGCAGGCGCAAATCTCATGGGGAGGATAACGCCAGATGCAC
CGTCAGGAGAGGTAGAGCAGCGCCCTAGAGCCCCATCAGCATCCGGGCGG
TCGTACGTTATAACTAACGGAGAACCCTGCAACCTCCAAACGTTTATGGA
CGGCATCCTGTGCGGCCTCGGTAGAAGCTCAGGTGCTGGCAGGCGCAAAT
CTCATGGGGAGGATAACGCCAGATGCACCGTCAGGAGAGGTAGAGCAGCG
CCCTAGAGCCCCATCAGCATCCGGGCGGTCGTACGTTATAACTAACGGAG
AACCCTGCAACCTCCAAACGTTTATGGACGGCATCCTGTGCGGCCTCGAT
TTTCCGACATCCAAGGTTGTTCGCGTGCCGGTTGAGGTGGCCCTATTTAC
CGCTCGGGTGGCTGAACTAGCATATCAGATTTTCCGACATCCAAGGTTGT
TCGCGTGCCGGTTGAGGTGGCCCTATTTACCGCTCGGGTGGCTGAACTAG
CATATCAGATAGGAATAACGAAGAGACCGGCCTGGACTCGGGCGGAAGTG
CGACGCCTTACCGAGGATAGCACGTTCAGCATAGCTCGGGCCCGGGAGGA
CCTGGGATACGAGCCCATATAGGAATAACGAAGAGACCGGCCTGGACTCG
GGCGGAAGTGCGACGCCTTACCGAGGATAGCACGTTCAGCATAGCTCGGG
CCCGGGAGGACCTGGGATACGAGCCCATCGTTGACCCGGAGACTGCCCTG
CAGCGCACCGTGGACTCGTTGAAACGCGCCAGATGGGCGAGACATCACTT
ACGGAGGCCAAGCCTCGGATACTGCATTTGCAATCCTCTAGGCATCTGGT
TGGTGACCCTCGCTGCTTTCGGAGGGCCTTGTCCAGCCTTTTTGGCACCA
CTGGCCAGCAAAGCGTTGACCCGGAGACTGCCCTGCAGCGCACCGTGGAC
TCGTTGAAACGCGCCAGATGGGCGAGACATCACTTACGGAGGCCAAGCCT
CGGATACTGCATTTGCAATCCTCTAGGCATCTGGTTGGTGACCCTCGCTG
CTTTCGGAGGGCCTTGTCCAGCCTTTTTGGCACCACTGGCCAGCAAAGCG
GCGCACGTCGGGCTCCTGCTGGTCAACCAGTTGTCGAGAGTGCGCGCGGT
GTGCGTGTCAGTCTACCTGATCCACGTGCTGGAGGGTGTCTACGCCTACA
GGGCTGCGAAAAAGGCCGGCCACAGGGACACCGCGCCGCTTTGGTTCCTT
CAGACCTTTGTAATCGGGTTCCCGTCCATTGCCTTGGTGAATAAGCTCAA
GTCGGAGAGCGTTTGACGGCGCACGTCGGGCTCCTGCTGGTCAACCAGTT
GTCGAGAGTGCGCGCGGTGTGCGTGTCAGTCTACCTGATCCACGTGCTGG
AGGGTGTCTACGCCTACAGGGCTGCGAAAAAGGCCGGCCACAGGGACACC
GCGCCGCTTTGGTTCCTTCAGACCTTTGTAATCGGGTTCCCGTCCATTGC
CTTGGTGAATAAGCTCAAGTCGGAGAGCGTTTGA
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