mRNA_S-dermatodea_contig12874.1753.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig12874.1753.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE) HSP 1 Score: 257 bits (657), Expect = 3.380e-80 Identity = 139/269 (51.67%), Postives = 177/269 (65.80%), Query Frame = 1
Query: 58 RKSLVRRQRRAFREHIKPMLADGTFSKRFRMDYTSFRILYQLLRPVLERNYNAGLGRNGTIPGEWALASTLRWLAGGSIWEAMDGPVMAHSTAYAKAKLVCLAINKCAALRVRWPKTQEALAQAAAGFEARSSSGVVKNSVGAADGLLIRRRKPRTKEHIAPDRFYSGHKKAVGMNMQAICDAQYRFIAVACTCPGSTNDRTAWGLSGFDRAVEQLPYPYVITGDAAYAPSEKMLVPYPGTGLETYADAYNYFQSQSRMPIEQTFGIFV 864
R VRR+RR++ + KPM+ DGTF RFRMDYT F +L +LRP LERN G RNG IP E+ LA LR+LAGGS++E MDG V+A STAYA V AIN+ L WP+ ++AL Q + RS++GV++ VGA DGL +R +P + H+ P FYSGHKK GMN Q +C+A+Y IA CPGS NDRTA+ S F ++ LP I GDAAY S+++LVPYPGT L DAYN++QSQ+R+ IEQ FGI V
Sbjct: 42 RDKFVRRERRSWYTYAKPMVQDGTFRLRFRMDYTEFALLADMLRPKLERNERMGALRNGVIPVEFQLAMALRFLAGGSVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEGEDALDQCGM-YRRRSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQGVCNARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQVLVPYPGTSLTRSQDAYNFYQSQARISIEQAFGIMV 309
BLAST of mRNA_S-dermatodea_contig12874.1753.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE) HSP 1 Score: 255 bits (652), Expect = 2.320e-79 Identity = 140/271 (51.66%), Postives = 175/271 (64.58%), Query Frame = 1
Query: 52 ARRKSLVRRQRRAFREHIKPMLADGTFSKRFRMDYTSFRILYQLLRPVLERNYNAGLGRNGTIPGEWALASTLRWLAGGSIWEAMDGPVMAHSTAYAKAKLVCLAINKCAALRVRWPKTQEALAQAAAGFEARSSSGVVKNSVGAADGLLIRRRKPRTKEHIAPDRFYSGHKKAVGMNMQAICDAQYRFIAVACTCPGSTNDRTAWGLSGFDRAVEQLPYPYVITGDAAYAPSEKMLVPYPGTGLETYADAYNYFQSQSRMPIEQTFGIFV 864
A R + V R+RR+F +++PM+ D TF KRFRMDYT F L +LRP L+R+ G RNG IP E+ LA TLR+LAGGS++E MD V+A STAYA V AIN+ L +WP +A AQA + RS++GV++ VGA DGL +R P K H P FYSGHKKA GMN Q IC+A Y I CPGS NDRTA+ SGFD + ++P I GDAAY S ++LVP PGT L DAYN++QSQ+R+ IEQ FGI V
Sbjct: 44 AHRGNFVYRERRSFYTYVRPMVEDNTFRKRFRMDYTDFMTLADILRPKLQRDEKMGALRNGAIPVEFQLAMTLRFLAGGSVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYGDDAEAQAEL-YRRRSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQGICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVPDPGTALTLSQDAYNFYQSQARISIEQAFGILV 313
BLAST of mRNA_S-dermatodea_contig12874.1753.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE) HSP 1 Score: 236 bits (602), Expect = 5.860e-72 Identity = 126/236 (53.39%), Postives = 156/236 (66.10%), Query Frame = 1
Query: 157 TSFRILYQLLRPVLERNYNAGLGRNGTIPGEWALASTLRWLAGGSIWEAMDGPVMAHSTAYAKAKLVCLAINKCAALRVRWPKTQEALAQAAAGFEARSSSGVVKNSVGAADGLLIRRRKPRTKEHIAPDRFYSGHKKAVGMNMQAICDAQYRFIAVACTCPGSTNDRTAWGLSGFDRAVEQLPYPYVITGDAAYAPSEKMLVPYPGTGLETYADAYNYFQSQSRMPIEQTFGIFV 864
TS +L LRP L++N GL RNG IP E +A TLRWLAGGSI+E MDG V+A STAY V A+N C L +WP+ ++A A+AA F RSS VV+ VGA DGL +R KP KE P+ +Y+GHKK GMN QA+CDAQYR +A CPGS NDRTA+ SGFD+ + LP + + GDAAY SE+++VP+PGT L DA NY+ SQ RM IEQT+GI V
Sbjct: 68 TSGLVLVDHLRPALQKNQQMGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGEDA-ARAAELFRNRSSMDVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILV 302
BLAST of mRNA_S-dermatodea_contig12874.1753.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE) HSP 1 Score: 202 bits (515), Expect = 3.360e-59 Identity = 121/272 (44.49%), Postives = 157/272 (57.72%), Query Frame = 1
Query: 49 KARRKSLVRRQRRAFREHIKPMLADGTFSKRFRMDYTSFRILYQLLRPVLERNYNAGLGRNGTIPGEWALASTLRWLAGGSIWEAMDGPVMAHSTAYAKAKLVCLAINKCAALRVRWPKTQEALAQAAAGFEARSSSGVVKNSVGAADGLLIRRRKPRTKEHIAPDRFYSGHKKAVGMNMQAICDAQYRFIAVACTCPGSTNDRTAWGLSGFDRAVEQLPYPYVITGDAAYAPSEKMLVPYPGTGLETYADAYNYFQSQSRMPIEQTFGIFV 864
K R +LV R+RR F +IKPML D TFS RFRM+Y FR+L LRP L++N GL RNG IP E+ +A TLRWLAGGSI+E MDG V+A STAY V A+N C L +WP+ ++ L + + + VV+ VGA DGL +R KP KE P+ +Y+GHKK GMN Q +C S NDRTA+ SGFD+ + LP + + G+AAY SE+++VP+PGT P EQT+GI V
Sbjct: 43 KRNRSTLVARERRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQQNEKTGLLRNGAIPVEYQVAMTLRWLAGGSIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGED-LPEPPSFSATAALMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ-VC---------------SQNDRTAFNFSGFDKLLAGLPEGHFVVGNAAYGASERVVVPFPGTSP----------------PXEQTYGILV 281
BLAST of mRNA_S-dermatodea_contig12874.1753.1 vs. uniprot
Match: A0A6H5K540_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K540_9PHAE) HSP 1 Score: 180 bits (457), Expect = 3.360e-51 Identity = 109/270 (40.37%), Postives = 132/270 (48.89%), Query Frame = 1
Query: 58 RKSLVRRQRRAFREHIKPMLADGTFSKRFRMDYTSFRILYQLLRPVLERNYNAGLGRNGTIPGEWALASTLRWLAGGSIWEAMDGPVMAHSTAYAKAKLVCLAINKCAALRVRWPKTQEALAQAAAGFEARSSSGVVKNSVGAADGLLIRRRKPRTKEHIAPDRFYSGHKKAVGMNMQAICDAQYRFIAVACTCPGSTNDRTAWGLSGFDRAVEQLPYPYVITGDAAYAPSEKMLVPYPGTGLETYADAYNYFQSQSRMPIEQTFGIFVS 867
R +LV R RR F +IKPML D TFS RFRM+Y FR+L LRP L++N GL RNG IP E+ +A TLRWLAGGS +E MDG V+A STAY A+CDAQYR +A CPGS NDRTA+ SGFD+ + LP + + GDAAY SE+++VP+PGT L DA NY+ SQ RM IEQT+GI VS
Sbjct: 46 RSTLVARVRRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQKNEKMGLLRNGAIPVEYQVAMTLRWLAGGSTYECMDGHVIARSTAY-----------------------------------------------------------------------------------HAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYMSQCRMAIEQTYGILVS 232
BLAST of mRNA_S-dermatodea_contig12874.1753.1 vs. uniprot
Match: A0A6H5JEM6_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM6_9PHAE) HSP 1 Score: 153 bits (387), Expect = 9.780e-42 Identity = 102/244 (41.80%), Postives = 134/244 (54.92%), Query Frame = 1
Query: 148 MDYTSFRILYQLLRPVLERNYNAGL---GRNGTIPGEWALASTLRWLAGGSIWEAMDGPVMAHSTAYAKAKLVCLAINKCAALRV-RWPKTQEALAQAAAGFEARSSSGVVKNSVGAADGLLIRRRKPRTKEHIAPDRFYSGHKKAVGMNMQAICDAQYRFIAVACTCPGSTNDRTAWGLSGFDRAVEQLPYPYVITGDAAYAPSEKMLVPYPGTGLETYADAYNYFQSQSRMPIEQTFGIFVS 867
M+ SF L +LLRP LE N G RNG I E +A LR LAG S W+ + ++ + Y V AIN A+ +P T+E + A F+ +S+ G+ V A DGL I+ PR KE +Y G K A G+N+QA+C A YRF A++ PGSTND AW S +AV +LP + I GDAAY EK+L PYPG L D++N+ SQ R+ IEQ+FGI VS
Sbjct: 1 MEKGSFHKLVELLRPSLEVNAFFGALRSPRNGAISVEVRVAVALRILAGASYWDVLVMFGLSVAVTYQILWEVIDAINNTPAVGAFDFPLTEEGCMRNANRFKDKSTDGIFSWVVAAVDGLFIKAEAPRAKETKNVIAYYPGSKSAYGINVQAMCTADYRFCAMSAISPGSTNDWVAWTRSSLAKAVARLPAGFHIIGDAAYPIGEKLLTPYPGRQLPAGEDSFNFHLSQLRVKIEQSFGILVS 244
BLAST of mRNA_S-dermatodea_contig12874.1753.1 vs. uniprot
Match: A0A6H5JUE6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUE6_9PHAE) HSP 1 Score: 157 bits (397), Expect = 2.600e-41 Identity = 101/259 (39.00%), Postives = 142/259 (54.83%), Query Frame = 1
Query: 97 EHIKPMLADGTFSKRFRMDYTSFRILYQLLRPVLERN--YNAGLGRNGTIPGEWALASTLRWLAGGSIWEAMDGPVMAHSTAYAKAKLVCLAINKCAALR-VRWPKTQEALAQAAAGFEARSSSGVVKNSVGAADGLLIRRRKPRTKEHIAPDRFYSGHKKAVGMNMQAICDAQYRFIAVACTCPGSTNDRTAWGLSGFDRAVEQLPYPYVITGDAAYAPSEKMLVPYPGTGLETYADAYNYFQSQSRMPIEQTFGIFV 864
EH++ + F + +RM+ F L LLRP+LERN Y R+G +P + LA LR LAG S + +A T + V AIN + +P+T E A+ A +EA+S+ G + V A DGL ++ P + ++SG+K G+N+QA CDA YRF +++ G+TND TAW S RAV +LP Y + GDAAY S+++L PYPG L DAYN++ SQ R+ IEQ FGI V
Sbjct: 76 EHVRDLRRRKVFRRTYRMEEGCFDKLADLLRPILERNDFYARKRTRHGAVPVKHRLAVALRILAGASYMDVAVLFGIAKETVFHVLWEVVDAINNTPEVGPFFFPQTVEECARQAKEWEAKSTGGAISGCVAAGDGLFVKTIAPSPVDTPNVLSYFSGNKSGYGLNIQATCDANYRFCSMSAISAGATNDWTAWNRSELSRAVARLPPGYYMLGDAAYPLSDQLLTPYPGKLLPRDQDAYNFYLSQLRVKIEQAFGILV 334
BLAST of mRNA_S-dermatodea_contig12874.1753.1 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE) HSP 1 Score: 152 bits (383), Expect = 2.830e-40 Identity = 94/218 (43.12%), Postives = 121/218 (55.50%), Query Frame = 1
Query: 49 KARRKSLVRRQRRAFREHIKPMLADGTFSKRFRMDYTSFRILYQLLRPVLERNYNAGLGRNGTIPGEWALASTLRWLAGGSIWEAMDGPVMAHSTAYAKAKLVCLAINKCAALRVRWPKTQEALAQAAAGFEARSSSGVVKNSVGAADGLLIRRRKPRTKEHIAPDRFYSGHKKAVGMNMQAICDAQYRFIAVACTCPGSTNDRTAWGLSGFDRAVEQ 702
K R +LV R+RR F HIKP+L D TFS RFRM+Y FR+L LRP L +N GL R G IP E+ +A TLRWLAGGSI+E MDG V+A STAY V A+N C L +WP EAR VV+ VGA DGL +R KP KE P+ +Y+GH+K V + A ++ + T ++ D +S + A+EQ
Sbjct: 43 KRNRSTLVARERRPFETHIKPLLQDHTFSVRFRMEYDDFRVLIDHLRPALHKNEKMGLLRIGAIPVEYQIAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWP-------------EARMD--VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHRKGVVVGDAAYGASERVVVPFPGTSLSASQDACNNYVSQYRMAIEQ 245
BLAST of mRNA_S-dermatodea_contig12874.1753.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE) HSP 1 Score: 149 bits (375), Expect = 7.580e-40 Identity = 71/134 (52.99%), Postives = 91/134 (67.91%), Query Frame = 1
Query: 463 VVKNSVGAADGLLIRRRKPRTKEHIAPDRFYSGHKKAVGMNMQAICDAQYRFIAVACTCPGSTNDRTAWGLSGFDRAVEQLPYPYVITGDAAYAPSEKMLVPYPGTGLETYADAYNYFQSQSRMPIEQTFGIFV 864
VV+ VGA DGL +R KP KE P+ +Y+GHK GMN QA+CDAQYR +A +CPGS NDRTA+ + FD+ + LP + + GDAAY SE+++VP+PGT L DA NY+ SQ RM IEQT+GI V
Sbjct: 17 VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKNGFGMNFQAVCDAQYRIVAWTMSCPGSQNDRTAFNFAWFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILV 150
BLAST of mRNA_S-dermatodea_contig12874.1753.1 vs. uniprot
Match: A0A6H5JHK3_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHK3_9PHAE) HSP 1 Score: 151 bits (381), Expect = 1.780e-39 Identity = 97/259 (37.45%), Postives = 141/259 (54.44%), Query Frame = 1
Query: 97 EHIKPMLADGTFSKRFRMDYTSFRILYQLLRPVLERN--YNAGLGRNGTIPGEWALASTLRWLAGGSIWEAMDGPVMAHSTAYAKAKLVCLAINKCAALRVRW-PKTQEALAQAAAGFEARSSSGVVKNSVGAADGLLIRRRKPRTKEHIAPDRFYSGHKKAVGMNMQAICDAQYRFIAVACTCPGSTNDRTAWGLSGFDRAVEQLPYPYVITGDAAYAPSEKMLVPYPGTGLETYADAYNYFQSQSRMPIEQTFGIFV 864
EH++ + G F + +RM+ SF L +LLRP LE N Y R+G +P + LA LR LAG S + +A T + V AIN + + P+T++ A+ A +EA+S+ GV V A DGL ++ P + ++SG+K G+N+QA CDA YRF +++ G+TND TAW S +V +LP Y + GDAAY S+ +L PYPG L D++N+ SQ R+ IEQ +GI V
Sbjct: 74 EHVRDIKRRGVFRRMYRMEEHSFNKLAELLRPFLESNDFYARKRTRSGAVPVKIRLAVALRMLAGASYLDVAVLFGIAKETVFHVLWEVVDAINNTPEVGAFFFPQTRDDCARQAKEWEAKSTGGVFSGCVAAGDGLFVKTIAPSPVDTPNVLSYFSGNKSGYGLNIQATCDANYRFCSMSAISAGATNDWTAWNRSSLSDSVARLPPGYYVLGDAAYPLSDHLLTPYPGKLLPRDEDSFNFHLSQLRVKIEQAYGILV 332 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12874.1753.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig12874.1753.1 >prot_S-dermatodea_contig12874.1753.1 ID=prot_S-dermatodea_contig12874.1753.1|Name=mRNA_S-dermatodea_contig12874.1753.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=289bp IKTHRNVRAALLAKVVKARRKSLVRRQRRAFREHIKPMLADGTFSKRFRMback to top mRNA from alignment at S-dermatodea_contig12874:607..1876- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig12874.1753.1 ID=mRNA_S-dermatodea_contig12874.1753.1|Name=mRNA_S-dermatodea_contig12874.1753.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1270bp|location=Sequence derived from alignment at S-dermatodea_contig12874:607..1876- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig12874:607..1876- >mRNA_S-dermatodea_contig12874.1753.1 ID=mRNA_S-dermatodea_contig12874.1753.1|Name=mRNA_S-dermatodea_contig12874.1753.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1734bp|location=Sequence derived from alignment at S-dermatodea_contig12874:607..1876- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |