mRNA_S-dermatodea_contig1272.1665.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1272.1665.1 vs. uniprot
Match: D7G873_ECTSI (Chromodomain-helicase-DNA-binding protein 8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G873_ECTSI) HSP 1 Score: 1584 bits (4102), Expect = 0.000e+0 Identity = 888/1160 (76.55%), Postives = 960/1160 (82.76%), Query Frame = 1
Query: 10 VDDDFTRAASSAGVVGEAMVEAEHRVIEELGQKRRLLMAVNESKAKPNSSNWSDVGAVYSLTDYVYAHENMGHVESMASRRHDPRAKPIEQLHPETGEVVKVWPSMTAASVALLIGVSALSACVNGITAQAGRWKWRFASKHTATALKMGVYRKHRVADMSGGPGTYLEPEAAAAQIASGKRG-DYDSDDG---FGDAVMTRAEDGASSSAAKASKAAAGGKEAHKEAPDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEERRLAGLDGDQGGTNGXXXXXXXXXXXXX----------HRNEPYDYNNM--GAEYRGYDAAGDDDREPGMEGDPARPRGRPKSDSFEDNNPXXXXXXXXXXXXXXXXXXXXXXXXMDAATAEALEQAKIGMARAAARDLRESRATRAQMMDWPYKDGKVPDFKNTNELRDYQRRGVNWMVSCWKKKRRGCVLADEMGLGKTVQVVAMLNYVFANSEREKGPFLVVVPLTTIEHWRREVEAWTDMNLCMYHDNGGRDMRDLIREYEWYYSGRSKRVLKFHVLVTTYDDVITDAEMLAQVPWRAVVVDEAHRMRNKNSALLGCLQQVVHNGVTVHAYQHRVLMTGTPMQNIKEELWPLMNFVDQSNFPDLQRFQDKYCKGEPGHEVDEARALRRRLKPYMLRRRKEDVTKDIPPKEETIIDVELTMVQKKYYRAIYERNHSVLNKVGAGAGKAPSLMNIQMELRKCCNHPFMVRGVEDHEVDNIVATMLEEAQKVDPDNSTSRLDHQKLRQLRLEKGLIHTSGKMVLLDKLLPKLKSEGHKVLIFSQFIGMLDMVQEFLALRGHKHERLDGRTTGNERQKSIDRFNREPNSFVFLLSTRAGGVGINLTAADTCIIYDSDWNPQNDVQAMARCHRIGQTKSVMVYRLITRNCFESEMFNRASMKLGLEQAVLGDAAGSLKPRDMEDLLKKGAYALTQMDEVDAMREFQDMDIDSILERKSRVLVEEPTAKGLGDDSDNDEESDKEDAPGAHRGDQHKVTWRSFG-GGAKTGPSLEDPDFWRKVMPDVMTPESMVSKLDEFENFKEGDEPAKKEMDGFMEDLAVMVVGLRKSNDED-EREKGVQLLVRVTCKRELFSEEQCAEAKRWELELQGTRLRQAARQTSSPEQVARSKGRSGSR 3435
V+D+ TR+ASS VGEA +EAEHR+IEELG KRRLLMAVNESK +P+ + WSDVG +YSL DYVYAHENMGHVES+A+RRHDPRAKPIEQL ETGEVVKVWPSMTAA+ L +GVSALSACVNGITAQAG WKWRFASKHTATALKMGVYRK RVADMS GPG YLEPEAAAAQIA+G++G +DSDD FGD +T KA A EA K+ P+ E + +R G+ G XXXXXXXXXXXXX H P Y+NM GA XXXXXXXXXXXXXXXXXX XXX+DAATA A+EQA+IGMARAAAR+LRESRATRAQMM+WPYKDGKVPDFKNTNELRDYQRRGVNWM+SCWKKK+RGC+LADEMGLGKTVQVVAMLNYVF+NSERE+GPFLVVVPLTTIEHWRREVEAWTDMNLCMYHDNGGRDMRDLIREYEWYYSGRSKRVLKFHVLVTTYDDVI+DAEMLAQVPWRAVVVDEAHRMRNKNSALLGCLQQVVHNG+ V+AYQHRVLMTGTPMQNIKEELWPLMNF+DQSNFPDLQRFQ+KYCKGEPGHEVDEARALRRRLKPYMLRRRKEDVTKDIPPKEETIIDVELTMVQKKYYRAIYERNHSVLNKVGAGAGKAPSLMNIQMELRKCCNHPFMVRGVEDHEVD IV ++ EAQ DP+ ++ RL+ + L+QLRLEKGLIHTSGKMVLLDKLLPKL+SEGHKVLIFSQFIGMLDMVQEFL+LRGHKHERLDGRTTGNERQKSIDRFNR+PNSFVFLLSTRAGGVGINLTAADTCIIYDSDWNPQNDVQAMARCHRIGQTKSVMVYRLITR+CFESEMFNRASMKLGLEQAVLGDAAG+LKPRDMEDLLKKGAYALTQMDEVDAMREFQ+MDID ILERKSRVL E+ AKG+ DDSD D+E + AP RGDQH+V WRSFG G KTGPSLEDPDFWRKVMPDVMTP+SMV+KLD FE E D +++ D FM+DL VMV+GLRKSND++ EREKGVQLLVRVTCKRE FSEEQC++AK+WELELQGTRLRQA RQ + AR+KGR G R
Sbjct: 1556 VEDELTRSASSGAAVGEATIEAEHRIIEELGPKRRLLMAVNESKGRPSPAEWSDVGYLYSLGDYVYAHENMGHVESIAARRHDPRAKPIEQLRAETGEVVKVWPSMTAAAAELNVGVSALSACVNGITAQAGGWKWRFASKHTATALKMGVYRKGRVADMSAGPGAYLEPEAAAAQIAAGRQGRGFDSDDEQLVFGDNAIT-----------VPPKAEA--IEAAKKPPEGENGEPAAAPDGAGPVDAENSASGGLKVDPNDPDAQRRFQQQGEHGXXXXXXXXXXXXXXXXXXXXXXXEMMTHDGRPV-YDNMAGGAAAXXLAEGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSAXXXVDAATAAAMEQARIGMARAAARELRESRATRAQMMEWPYKDGKVPDFKNTNELRDYQRRGVNWMLSCWKKKKRGCILADEMGLGKTVQVVAMLNYVFSNSERERGPFLVVVPLTTIEHWRREVEAWTDMNLCMYHDNGGRDMRDLIREYEWYYSGRSKRVLKFHVLVTTYDDVISDAEMLAQVPWRAVVVDEAHRMRNKNSALLGCLQQVVHNGMAVNAYQHRVLMTGTPMQNIKEELWPLMNFIDQSNFPDLQRFQEKYCKGEPGHEVDEARALRRRLKPYMLRRRKEDVTKDIPPKEETIIDVELTMVQKKYYRAIYERNHSVLNKVGAGAGKAPSLMNIQMELRKCCNHPFMVRGVEDHEVDQIVGNLMAEAQAGDPNKASERLNQRVLKQLRLEKGLIHTSGKMVLLDKLLPKLRSEGHKVLIFSQFIGMLDMVQEFLSLRGHKHERLDGRTTGNERQKSIDRFNRDPNSFVFLLSTRAGGVGINLTAADTCIIYDSDWNPQNDVQAMARCHRIGQTKSVMVYRLITRDCFESEMFNRASMKLGLEQAVLGDAAGTLKPRDMEDLLKKGAYALTQMDEVDAMREFQNMDIDVILERKSRVLKEKAIAKGIADDSDQDDEEEDIQAP---RGDQHRVKWRSFGPSGEKTGPSLEDPDFWRKVMPDVMTPDSMVTKLDTFEGMAE-DAVTQEDKDAFMKDLGVMVMGLRKSNDDEGEREKGVQLLVRVTCKREWFSEEQCSKAKKWELELQGTRLRQATRQDTKDGDKARAKGRRGGR 2697
BLAST of mRNA_S-dermatodea_contig1272.1665.1 vs. uniprot
Match: A0A7R9YC09_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YC09_9STRA) HSP 1 Score: 695 bits (1794), Expect = 1.420e-225 Identity = 387/749 (51.67%), Postives = 509/749 (67.96%), Query Frame = 1
Query: 1237 DFKNTNELRDYQRRGVNWMVSCWKKKRRGCVLADEMGLGKTVQVVAMLNYVFANSEREKGPFLVVVPLTTIEHWRREVEAWTDMNLCMYHDNGG--------RDMRDLIREYEWYYSGRSKRVLKFHVLVTTYDDVITDAEMLAQVPWRAVVVDEAHRMRNKNSALLGCLQQVVHNGVTVHAYQHRVLMTGTPMQNIKEELWPLMNFVDQSNFPDLQRFQDKYCKGEPGHEVDEARALRRRLKPYMLRRRKEDVTKDIPPKEETIIDVELTMVQKKYYRAIYERNHSVLNKVGAGAGKAPSLMNIQMELRKCCNHPFMVRGVEDHEVDNIVATMLEEAQKVDPDNSTSRLD-HQKLRQLRLEKGLIHTSGKMVLLDKLLPKLKSEGHKVLIFSQFIGMLDMVQEFLALRGHKHERLDGRTTGNERQKSIDRFNREPNSFVFLLSTRAGGVGINLTAADTCIIYDSDWNPQNDVQAMARCHRIGQTKSVMVYRLITRNCFESEMFNRASMKLGLEQAVLG----------DAAGS------LKPRDMEDLLKKGAYALTQMDEVDAMREFQDMDIDSILERKSRVLVEEPTAKGLGDDSDNDEESDKEDAPGAHRGDQHKVTWRSFGGGAKTGPS---LEDPDFWRKVMPDVMTPESMVSKLDEF-ENFKEGDEPAKKEMDGFMEDLAVMVVGLRKSNDE-----DEREKGVQLLVRVTCKRELFSEEQCAEAKRWELELQGTRLRQAAR 3381
++++ +LRDYQ G+NWM+ C+ R GC+LADEMGLGKTVQVV++L ++F E KGPFLVVVPL+TIEHWRRE E WTDM +C+YHD G R+MRD+IREYEWY+ RS+R+LKF +L+TTY+D+I D E L +PW VV+DEAHR+RN+ S LL CL+ ++ G+ + YQHRVLMTGTP+QN +ELW L+NF++Q FP+L+ FQ+KY +V AL+R+L+P++LRR KEDV DIPPKEETIIDVELT +QK++YRAI+E+NH+ L K GA +G P L+N+ ++LRK CNHPF++ GVED +D + ++ + + + S+ + H K R+E+G+I SGKMVL+DKLLPKL+ EGHKVLIFSQ + MLD++Q+F RG ERLDG TGN+RQK+IDRFN +SFVFLLSTRAGGVGINLTAADT IIYDSDWNPQNDVQAMARCHRIGQTK V VYRLITR FE+EMF+RAS KLGLEQA+LG +A S + ++ME+LL+KGAY L DE + +++F + DIDSIL+ ++RV V E G G S D R + + F G K G S L DPDFW+K+MPD++TP + +L+ + E D + + + +M+DL M L DE DE+ + LL+RV+ + ELFS +Q A+ W L+G R R AR
Sbjct: 244 EYRDGRKLRDYQVEGLNWMLRCYYGNR-GCILADEMGLGKTVQVVSLLEHIF-RVEGVKGPFLVVVPLSTIEHWRREFEGWTDMRVCVYHDTGSSAGGGGSSREMRDVIREYEWYWKNRSRRLLKFQILLTTYEDLIKDFEHLMPIPWHTVVIDEAHRLRNQVSKLLQCLKDILPRGMATYGYQHRVLMTGTPLQNNTQELWTLLNFIEQEKFPELEDFQEKYGNMATKSQV---LALQRQLEPHLLRRVKEDVAADIPPKEETIIDVELTTLQKQFYRAIFEKNHAFLYK-GAKSGAIPKLLNVHIQLRKVCNHPFLISGVEDMRLDELEESLSSKLAGENGERGFSQEEFHTKFDAARVEEGIIAASGKMVLVDKLLPKLQREGHKVLIFSQMVRMLDLLQDFCGHRGFSCERLDGAITGNDRQKAIDRFNTREDSFVFLLSTRAGGVGINLTAADTVIIYDSDWNPQNDVQAMARCHRIGQTKDVRVYRLITRRSFEAEMFDRASRKLGLEQAILGTGEFGAEKDPEAQASATDPSKMSAQEMENLLRKGAYHLLDDDE-EEVQQFCEGDIDSILKTRTRVHVVEG---GSGQRSAID------------RITKTRRAGFGFDGEEKDGESNLDLHDPDFWKKIMPDMITPHMLAERLEALGKKMDEDDSTFEADAERYMDDLTRMTASLCDQQDEGKLHEDEKHAALTLLLRVSMREELFSGQQRMTARNWAEALEGDRRRGRAR 970
BLAST of mRNA_S-dermatodea_contig1272.1665.1 vs. uniprot
Match: A0A836CJJ2_9STRA (SNF2 family N-terminal domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJJ2_9STRA) HSP 1 Score: 663 bits (1710), Expect = 2.150e-225 Identity = 342/519 (65.90%), Postives = 406/519 (78.23%), Query Frame = 1
Query: 1237 DFKNTNELRDYQRRGVNWMVSCWKKKRRGCVLADEMGLGKTVQVVAMLNYVFANSEREKGPFLVVVPLTTIEHWRREVEAWTDMNLCMYHD-NGGRDMRDLIREYEWYYSGR-----SKRVLKFHVLVTTYDDVITDAEMLAQVPWRAVVVDEAHRMRNKNSALLGCLQQVVHNGVTVHAYQHRVLMTGTPMQNIKEELWPLMNFVDQSNFPDLQRFQDKYCKGEPGHEVDEARALRRRLKPYMLRRRKEDVTKDIPPKEETIIDVELTMVQKKYYRAIYERNHSVLNKVGAGAGKA---PSLMNIQMELRKCCNHPFMVRGVEDHEVDNIVATMLEEAQKVDPDNSTSRLDHQKLRQLRLEKGLIHTSGKMVLLDKLLPKLKSEGHKVLIFSQFIGMLDMVQEFLALRGHKHERLDGRTTGNERQKSIDRFNREPNSFVFLLSTRAGGVGINLTAADTCIIYDSDWNPQNDVQAMARCHRIGQTKSVMVYRLITRNCFESEMFNRASMKLGLEQAVLG 2766
DFK N LRDYQ GV WM+SCW + RR C+LADEMGLGKTVQV A+L ++F+ + +GPFLVVVPL+TIEHWRRE+EAWTDM LC+YHD GGR+MRD+IREYEW+Y R S+ VLKFHVL+TTYDD+I D + L+ V WR VVVDEAHR+RN NS LL CL+ V+ G VH +QHRVLMTGTP+QN EELW LMNF++ F D RF ++Y E +V R+L+RR+ P+MLRR KEDV DIPPKEET++DVELT++QK+YYRAI+E+NH++L KV +GA PSLMNIQMELRKCCNHP++VRGVEDHEV ML+ Q+ + L + RL KGL+ +SGKMVLLDKLL KL+ EGHKVL+FSQFIGMLD++ E+ +L G HERLDGR TGNERQ++IDRFNR+P SF+FLLSTRAGGVGINLTAAD CII+DSDWNPQNDVQAMARCHRIGQTK V +YRLITR FESEMF RAS KLGLEQAVLG
Sbjct: 11 DFKG-NLLRDYQLEGVRWMLSCWYR-RRSCILADEMGLGKTVQVTALLEHIFS-VDGIRGPFLVVVPLSTIEHWRREIEAWTDMELCVYHDIGGGREMRDVIREYEWHYRDRAGNIISQNVLKFHVLLTTYDDMIRDVDELSAVAWRCVVVDEAHRLRNLNSRLLECLRAVMLRGAGVHGFQHRVLMTGTPLQNNMEELWSLMNFIEPDKFGDRARFLERYGAMETEEQV---RSLQRRIAPHMLRRVKEDVASDIPPKEETVVDVELTLLQKQYYRAIFEKNHAILYKVSSGASGGAGIPSLMNIQMELRKCCNHPYLVRGVEDHEV----GQMLQLLQQAKGPAGEAELARE-----RLTKGLVQSSGKMVLLDKLLTKLRREGHKVLLFSQFIGMLDIIGEYASLSGIPHERLDGRITGNERQRAIDRFNRDPASFLFLLSTRAGGVGINLTAADVCIIFDSDWNPQNDVQAMARCHRIGQTKQVAIYRLITRGSFESEMFARASRKLGLEQAVLG 514
BLAST of mRNA_S-dermatodea_contig1272.1665.1 vs. uniprot
Match: A0A7S3UZC9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UZC9_HETAK) HSP 1 Score: 655 bits (1690), Expect = 2.780e-222 Identity = 337/530 (63.58%), Postives = 413/530 (77.92%), Query Frame = 1
Query: 1186 ATRAQMMDWP---YKDGKVPDFKNTNELRDYQRRGVNWMVSCWKKKRRGCVLADEMGLGKTVQVVAMLNYVFANSEREKGPFLVVVPLTTIEHWRREVEAWTDMNLCMYHD-NGGRDMRDLIREYEWYYSGRSKRVLKFHVLVTTYDDVITDAEMLAQVPWRAVVVDEAHRMRNKNSALLGCLQQVVHNGVTVHAYQHRVLMTGTPMQNIKEELWPLMNFVDQSNFPDLQRFQDKYCKGEPGHEVDEARALRRRLKPYMLRRRKEDVTKDIPPKEETIIDVELTMVQKKYYRAIYERNHSVLNKVGAGAGKAPSLMNIQMELRKCCNHPFMVRGVEDHEVDNIVATMLEEAQKVDPDNSTSRLDHQKLRQLRLEKGLIHTSGKMVLLDKLLPKLKSEGHKVLIFSQFIGMLDMVQEFLALRGHKHERLDGRTTGNERQKSIDRFNREPNSFVFLLSTRAGGVGINLTAADTCIIYDSDWNPQNDVQAMARCHRIGQTKSVMVYRLITRNCFESEMFNRASMKLGLEQAVL 2763
A R M +W K G+V FKN N+LRDYQ +GVNW++ CW + RRGC+LADEMGLGKTVQVV LN+++ ER KGPFLVVVPL+T+EHWRREVEAWTDM C+YHD GG+D RD+IREYEWYY GRS+R+LKF VLVTTYDD+I D E LA+VPWR V +DEAHR++N+ S LL C+Q V+ NG H YQ +LMTGTP+QN ELW L+NF++ + FPDL++F+D++ G+ E + RAL+RRL+P++LRR KEDV +IPPK ET++DVELT QK+YYRAI+ERNH+ L K GA P LMNIQMELRKCCNHPF+ GVE E+D + A + + + D ++ + +L R+E+GLI +SGKMVL+DKLLPKL+ EGH+VL FSQ + +LD+++EF RG+ ERLDGR TGN RQ+SIDRFNR+P+SFVFLLSTRAGGVGINLTAADT II+DSDWNPQNDVQA ARCHRIGQTK VMVYRLITR FE+EMF RAS KLGLEQAVL
Sbjct: 4 AKRGGMPEWRKKLMKKGRV--FKNDNQLRDYQTQGVNWLLRCWYQ-RRGCILADEMGLGKTVQVVMTLNHLY-EVERLKGPFLVVVPLSTLEHWRREVEAWTDMVCCVYHDIGGGKDFRDVIREYEWYYRGRSRRLLKFQVLVTTYDDLIKDYEELAEVPWRCVAIDEAHRLKNQRSKLLECMQLVMPNGQVRHGYQQVILMTGTPLQNNMAELWSLLNFIEPAKFPDLEKFEDRF--GDMQSEA-QVRALQRRLEPHLLRRVKEDVADEIPPKRETVVDVELTTTQKQYYRAIFERNHAFLFKGTKGA--LPKLMNIQMELRKCCNHPFLTLGVEAFEMDRLRAEL---GRALGRDALGTQKAYDELEAKRVEQGLIMSSGKMVLVDKLLPKLRREGHRVLFFSQMVRVLDLLEEFCEYRGYPCERLDGRITGNARQESIDRFNRDPDSFVFLLSTRAGGVGINLTAADTVIIFDSDWNPQNDVQAQARCHRIGQTKDVMVYRLITRRSFEAEMFERASRKLGLEQAVL 521
BLAST of mRNA_S-dermatodea_contig1272.1665.1 vs. uniprot
Match: W7TC43_9STRA (Chromodomain-helicase-dna-binding protein 7 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TC43_9STRA) HSP 1 Score: 679 bits (1753), Expect = 5.860e-210 Identity = 383/747 (51.27%), Postives = 496/747 (66.40%), Query Frame = 1
Query: 1240 FKNTNELRDYQRRGVNWMVSCWKKKRRGCVLADEMGLGKTVQVVAMLNYVFANSEREKGPFLVVVPLTTIEHWRREVEAWTDMNLCMYHDNGG-RDMRDLIREYEWYYSGRSKRVLKFHVLVTTYDDVITDAEMLAQVPWRAVVVDEAHRMRNKNSALLGCLQQVVHNGVTVHAYQHRVLMTGTPMQNIKEELWPLMNFVDQSNFPDLQRFQDKYCKGEPGHEVDEARALRRRLKPYMLRRRKEDVTKDIPPKEETIIDVELTMVQKKYYRAIYERNHSVLNKVGAGAGKAPSLMNIQMELRKCCNHPFMVRGVEDHEVDNIVATMLEEAQKVDPDNSTSRLDHQKLRQLRLEKGLIHTSGKMVLLDKLLPKLKSEGHKVLIFSQFIGMLDMVQEFLALRGHKHERLDGRTTGNERQKSIDRFNREPNSFVFLLSTRAGGVGINLTAADTCIIYDSDWNPQNDVQAMARCHRIGQTKSVMVYRLITRNCFESEMFNRASMKLGLEQAVLGD-----------AAGSL-----KP--RDMEDLLKKGAYALTQMDEVDAMREFQDMDIDSIL-ERKSRVLVEEP--TAKGLGDDSDNDEESDKEDAPGAHRGDQHKVTWRSFGGGAKTGPSLEDPDFWRKVMPDVMTPESMVSKLDEF-------------ENFKEGDEPAKKEMDGFMEDLAVMVVGLRKSNDEDEREKGV--QLLVRVTCKRELFSEEQCAEAKRWELELQGTRLR 3369
FK+ N+LRDYQ GV W++ CW + RR C+LADEMGLGKTVQ+V ML ++++ + GPFLVVVPL+TIEHWRRE EAWTDM CMY+D GG R MRD++REYEWYY RS+R+LK HVLVTTY+ +I D E + ++PWR ++VDEAHR+RN L CL+ V G+ + YQHRVLMTGTP+QN +ELW L+++++ + FPD+++F ++Y + E VD+ + L++RL+P++LRR KEDV DIP KEETIIDVELT +QK+YYRAI+ERNH+ L G P LMNIQMELRKCCNHP++V GVED E++ + T++ D L R+E+GL+ +SGKMVL+DKLLPKL+ EGH++LIFSQ I +LD+++EF RG ERLDGR TGN+RQ++IDRFN +P+SFVFLLSTRAGGVGINLTAADT II+DSDWNPQNDVQAMARCHRIGQTK V VYRLITR FESEMF RAS KLGLE AVLG + G++ KP ++ME LLK+GAYAL D+ DA +EF + DID I+ ER RV+++ P TA L + GA + K + S G A + DPDFW KVMPD+ TPES+ + A E +EDL ++ L R++ + LL +V+ K +LF+ EQ + +W L+GTR+R
Sbjct: 1228 FKDGNKLRDYQLLGVQWLLKCWYQ-RRSCILADEMGLGKTVQIVTMLEHIYS-VDGLPGPFLVVVPLSTIEHWRREFEAWTDMRFCMYYDVGGARGMRDVMREYEWYYRNRSRRILKIHVLVTTYEALIKDYEEIGEIPWRCIIVDEAHRLRNWKGKLHECLKVVSQTGLQRYGYQHRVLMTGTPLQNNTQELWSLLHYIEPTKFPDMEKFNERYGRVET---VDQVQQLQKRLEPHLLRRTKEDVATDIPAKEETIIDVELTTLQKQYYRAIFERNHAFLYNKAGMRGLLPKLMNIQMELRKCCNHPYLVEGVEDAEMEKLQETIM---------------DPVALETERMERGLVASSGKMVLVDKLLPKLRREGHRLLIFSQMIKVLDLLEEFCERRGFPVERLDGRVTGNQRQQAIDRFNTDPDSFVFLLSTRAGGVGINLTAADTVIIFDSDWNPQNDVQAMARCHRIGQTKEVQVYRLITRKSFESEMFERASKKLGLEHAVLGGHNFRDDGGEGGSEGAVANMVDKPTNKEMEQLLKQGAYALLDEDDEDA-KEFCEDDIDKIMKERTHRVVLDAPGKTASWLTKKA------------GAFK----KRAFTSSEGVAAADVDVNDPDFWVKVMPDLKTPESLDRRFAALGXXXXXXXXXXXXXXXXXXXXEAAGEFFKDLEDLVKRMIDLHNKGKCPTRDREICTMLLFKVSIKGDLFTPEQKSLVAKWRTSLEGTRVR 1937
BLAST of mRNA_S-dermatodea_contig1272.1665.1 vs. uniprot
Match: A0A7S2EV94_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EV94_9STRA) HSP 1 Score: 656 bits (1693), Expect = 1.380e-202 Identity = 381/775 (49.16%), Postives = 491/775 (63.35%), Query Frame = 1
Query: 1198 QMMDWPYKDGKVPDFKNTNELRDYQRRGVNWMVSCWKKKRRGCVLADEMGLGKTVQVVAMLNYVFANSEREKGPFLVVVPLTTIEHWRREVEAWTDMNLCMYHDNGGRDMRDLIREYEWYYSGRSKRV--LKFHVLVTTYDDVITDAEMLAQVPWRAVVVDEAHRMRNKNSALLGCLQQVVHNGVTVHAYQHRVLMTGTPMQNIKEELWPLMNFVDQSNFPDLQRFQDKYCKGEPGHEVDEARALRRRLKPYMLRRRKEDVTKDIPPKEETIIDVELTMVQKKYYRAIYERNHSVLNKVGAGAGKAPSLMNIQMELRKCCNHPFMVRGVEDHEVDNIVATMLEEAQKVDPDNSTSRLDHQKLRQLRLEKGLIHTSGKMVLLDKLLPKLKSEGHKVLIFSQFIGMLDMVQEFLALRGHKHERLDGRTTGNERQKSIDRFNREPNSFVFLLSTRAGGVGINLTAADTCIIYDSDWNPQNDVQAMARCHRIGQTKSVMVYRLITRNCFESEMFNRASMKLGLEQAVLGDAAGSL---KP--RDMEDLLKKGAYALTQMDEVDAMREFQDMDIDSILERKSRVLVEE--PTAKGLGDDSDNDEESDKEDAPGAHRGDQHKVTWRSFGGGAKTGPSLEDPDFWRKVMPDVMTPESMVSKLDEFENFKE------------GDEPAKKEMDG----------------FMEDLAVMVVGLRKSNDED-----EREKGVQLLVRVTCKRELFSEEQCAEAKRWELELQGTRLRQAARQTSSP 3396
+ D Y K ++KN N+LRDYQ GVNW+ SCW K R C+LADEMGLGKTVQ+V+ + ++F +E+ PFLVVVPL+T+EHWRRE E WTDM C+YHD R RD++REYEWYY+ R LKF VLVTTYD +I D +++ Q+PWR VVDEAHR+RN LL C++++ G + +Q RVLMTGTP+QN +ELW L+NF++ FP ++ FQ + +V+ AL+R++ PYMLRR KEDV KDIP KEET+IDVELT +QK+YYRAI+E NH+ L+ +GA AP LMNIQMELRKCCNHPF++ G+E E++ + E+ D T HQ L G I TSGKMVLLDKLLPKL+ EGHKVLIFSQ + MLD++ ++ RG +HERLDGR GNERQK+IDRF E +SF+FLLSTRAGGVGINLTAAD CII+DSDWNPQNDVQA ARCHRIGQTK VM+YRLIT FE EMF+RAS KLGLEQAVLG KP ++ME LLKKGAYAL + + + +EF DI+SIL +++R V E TA L N +S K T + A G ++DP FW+KVMPD +TP M++KL + E D A+ ++G FM D+ M+ G+ + ++D E+ +LL+ ++ K ++F+EEQ + AK L+G R R+ S P
Sbjct: 1041 EFRDKLYDHEKPHNYKNGNKLRDYQVDGVNWLASCWYK-RHSCILADEMGLGKTVQIVSYIEHLF-RAEKILRPFLVVVPLSTVEHWRREFEGWTDMQCCVYHDRQ-RVWRDVMREYEWYYADRPHTADYLKFDVLVTTYDTLIGDFDVIGQIPWRVTVVDEAHRLRNVKGKLLECMKEISAKGTLQYGFQSRVLMTGTPLQNNTQELWTLLNFIEPYKFPSMEEFQVSFGNMANREQVE---ALQRKISPYMLRRVKEDVAKDIPAKEETVIDVELTSIQKQYYRAIFEHNHAFLS-MGASRTTAPKLMNIQMELRKCCNHPFLLDGIESREMEKANKELTEKGVL---DGKTPEEQHQLLN----VHGYIQTSGKMVLLDKLLPKLRQEGHKVLIFSQMVKMLDLISDYCDFRGFRHERLDGRVRGNERQKAIDRFETEHDSFLFLLSTRAGGVGINLTAADICIIFDSDWNPQNDVQAQARCHRIGQTKDVMIYRLITSRTFEQEMFDRASKKLGLEQAVLGTFGQDNDDDKPTSKEMEQLLKKGAYALLEDENDEIGKEFCADDIESILAKRTRTRVVEGTKTASWLNKQGMNITKS--------------KFTAEA----ANAGVDVDDPLFWQKVMPDFVTPTIMLTKLKDLSKMAEKMASASKKKTPGNDANAQDRLEGGDQLHISRGNQKKINKFMSDVTGMMDGIFEQVEDDTLPSTEKAACSKLLLTISVKHKMFNEEQRSMAKIMLKRLEGDRRRRCRTNGSEP 1783
BLAST of mRNA_S-dermatodea_contig1272.1665.1 vs. uniprot
Match: A0A7S2LNH2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LNH2_9STRA) HSP 1 Score: 645 bits (1665), Expect = 1.690e-199 Identity = 375/766 (48.96%), Postives = 487/766 (63.58%), Query Frame = 1
Query: 1165 RDLRESRATRAQMMDWPYKDGKVPDFKNTNELRDYQRRGVNWMVSCWKKKRRGCVLADEMGLGKTVQVVAMLNYVFANSEREKGPFLVVVPLTTIEHWRREVEAWTDMNLCMYHDNGGRDMRDLIREYEWYYSGR--SKRVLKFHVLVTTYDDVITDAEMLAQVPWRAVVVDEAHRMRNKNSALLGCLQQVVHNGVTVHAYQHRVLMTGTPMQNIKEELWPLMNFVDQSNFPDLQRFQDKYCKGEPGHEVDEARALRRRLKPYMLRRRKEDVTKDIPPKEETIIDVELTMVQKKYYRAIYERNHSVLNKVGAGAGKAPSLMNIQMELRKCCNHPFMVRGVEDHEVDNIVATMLEEAQKVDPDNSTSRLDHQKLRQLRLEKGLIHTSGKMVLLDKLLPKLKSEGHKVLIFSQFIGMLDMVQEFLALRGHKHERLDGRTTGNERQKSIDRFNREPNSFVFLLSTRAGGVGINLTAADTCIIYDSDWNPQNDVQAMARCHRIGQTKSVMVYRLITRNCFESEMFNRASMKLGLEQAVLGDAAGSL---KP--RDMEDLLKKGAYALTQMDEVDAMREFQDMDIDSILERKSRVLVEE--PTAKGLGDDSDNDEESDKEDAPGAHRGDQHKVTWRSFGGGAKT-GPSLEDPDFWRKVMPDVMTPESMVSKLDEFENFKEGDEPAKKEMDG----------------FMEDLAVMVVGLRKSNDED-----EREKGVQLLVRVTCKRELFSEEQCAEAKRWELELQGTRLR 3369
RD ++ R + D Y K +K N LRDYQ GVNW+ SC+ K++ GC+LADEMGLGKTVQ+V+ L ++ E+ GPFLVVVPL+T+EHWRRE E WTDM C+YHD R RD++REYEWYY R + LKF+VLVTTYD +I D +++ VPWR VVDEAHR+RN LL C++++ G + +Q RVLMTGTP+QN +ELW L+NF++ F DL F++ + +V+ AL+R++ P+MLRR KEDV KDIP KEET+IDVELT +QK+YYRAI+E NH+ L+ +G G AP LMNIQMELRKCCNHPF++ GVE E+DN + + DN + H L E G + +SGKMVLLDKLLPKL+ EGHKVLIFSQF+ MLD++ ++ R +ERLDGR GNERQK+IDRF E +SFVFLLSTRAGGVGINLTAAD CII+DSDWNPQNDVQA ARCHRIGQTK V +YRL+T FE EMF+RAS KLGLEQAVLG KP ++ME LLKKGAYAL + D+ + EF +I++ILE ++R V E TA L N VT F +T G ++DP FW+KVMPD +TP+ +++++ E E E P +K +G FM DL ++ + + + + E+ LL+ +T K+ +F++EQ A+R L+G R R
Sbjct: 1225 RDSKKGRDAYLEFRDKLYDSNKPHSYKGGNRLRDYQIDGVNWLSSCYYKEQ-GCILADEMGLGKTVQIVSYLEHLH-RVEKVHGPFLVVVPLSTVEHWRREFEGWTDMQCCVYHDRQ-RVWRDVLREYEWYYEDRPHTPDYLKFNVLVTTYDTLIGDFDVIGDVPWRVAVVDEAHRLRNVKGKLLECMKEISGKGTLKYGFQSRVLMTGTPLQNNTQELWTLLNFIEPGLFRDLDDFEENFGNMANREQVE---ALQRKISPFMLRRVKEDVAKDIPAKEETVIDVELTSIQKQYYRAIFEHNHAFLS-MGTAKGGAPKLMNIQMELRKCCNHPFLLDGVESRELDNRHEQLRANGEF---DNKSPEEQHDLLN----EYGYVLSSGKMVLLDKLLPKLRQEGHKVLIFSQFVKMLDLISDYCEFRDFNYERLDGRVRGNERQKAIDRFETEDDSFVFLLSTRAGGVGINLTAADICIIFDSDWNPQNDVQAQARCHRIGQTKDVRIYRLVTSRSFEQEMFDRASKKLGLEQAVLGTFGQDNEDDKPTSKEMEQLLKKGAYALLEEDD-EMGNEFVADNIENILETRTRTRVVEGAKTASWLNKKGMN-------------------VTKSKFASDKETAGLDVDDPLFWQKVMPDFVTPDILLNRISEIEAEMEKLAPGRKAKNGKSKRGLSRGNQKKLREFMNDLKGVMEDIFEQDSMETLPSSEKASCQNLLLTITVKQNMFNDEQRKTAQRLLSRLEGDRRR 1956
BLAST of mRNA_S-dermatodea_contig1272.1665.1 vs. uniprot
Match: A0A1E7EUS8_9STRA (SNF2_N-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUS8_9STRA) HSP 1 Score: 599 bits (1544), Expect = 7.300e-199 Identity = 328/593 (55.31%), Postives = 409/593 (68.97%), Query Frame = 1
Query: 1174 RESRATRAQMMDWPYKDGKVPDFKNTNELRDYQRRGVNWMVSCWKKKRRGCVLADEMGLGK-------TVQVVAMLNYVFANSEREKGPFLVVVPLTTIEHWRREVEAWTDMNLCMYHDNGGRDMRDLIREYEWYYSG--RSKRVLKFHVLVTTYDDVITDAEMLAQVPWRAVVVDEAHRMRNKNSALLGCLQQVVHNGVTVHAYQHRVLMTGTPMQNIKEELWPLMNFVDQSNFPDLQRFQDKYCKGEPGHEVDEARALRRRLKPYMLRRRKEDVTKDIPPKEETIIDVELTMVQKKYYRAIYERNHSVLNKVGAGAGKAPSLMNIQMELRKCCNHPFMVRGVEDHEVDNIVATMLEEAQKVDPDNSTSRLDHQKLRQLRLEKGLIHTSGKMVLLDKLLPKLKSEGHKVLIFSQFIGMLDMVQEFLALRGHKHERLDGRTTGNERQKSIDRFNREPNSFVFLLSTRAGGVGINLTAADTCIIYDSDWNPQNDVQAMARCHRIGQTKSVMVYRLITRNCFESEMFNRASMKLGLEQAVLGDAAGSL---KP--RDMEDLLKKGAYALTQMDEVDAMREFQDMDIDSILERKSR 2910
++S+ + D Y + +KN N+LRDYQ GVNW+ S + KK+ GC+LADEMGLGK TVQ+V+ L ++ E+ GPFLVVVPL+T+EHWRRE E WTDM C+YHD R RD++REYEWYY RS LKF VLVTTYD +I D +++ Q+P+R VVDEAHR+RN+ LL C++++ G H YQ RVLM+GTP+QN ELW L+NF++ FPDL F Y +V+ +L+ ++ P+MLRR KEDV KDIP KEET+IDVELT VQK+YYRAI+ERNH+ LN +G AP LMNIQMELRK CNHP ++ GVE E + + LEE K D S + Q + L+ + TSGKMVLLDKLLPKL+ EGHK+LIFSQ + MLD++ E+ R HERLDGR G +RQKSIDRFN E N+F+FLLSTRAGGVGINLTAAD CII+DSDWNPQNDVQA ARCHRIGQTK V +YRL+T FE EMF+RAS KLGLEQAVLG KP ++ME LLKKGAYAL D + +++F DID+IL +++R
Sbjct: 45 KQSKEALMEFRDKLYDPTEPHPYKNGNKLRDYQVEGVNWLASTFYKKQ-GCILADEMGLGKVSIFGSTTVQIVSYLEHLH-RVEKITGPFLVVVPLSTVEHWRREFEGWTDMVTCVYHDRQ-RQWRDVLREYEWYYEDKPRSPEFLKFSVLVTTYDTLIGDFDVIGQIPFRVAVVDEAHRLRNQKGKLLECMKEISAKGTIQHGYQSRVLMSGTPLQNDLSELWTLLNFIEPFKFPDLDNFLYHYGNMRSREQVE---SLQAQISPFMLRRVKEDVAKDIPAKEETVIDVELTSVQKQYYRAIFERNHAFLN-MGNSRVTAPKLMNIQMELRKVCNHPCLLDGVEHREQERVFKEFLEEG-KFD---GKSPEEQQYIMNEHLQ---VQTSGKMVLLDKLLPKLRREGHKILIFSQMVKMLDLISEYCEFRNFPHERLDGRVRGADRQKSIDRFNTEENAFLFLLSTRAGGVGINLTAADVCIIFDSDWNPQNDVQAQARCHRIGQTKDVRIYRLVTSRSFEEEMFDRASKKLGLEQAVLGTFGQDEDDDKPTNKEMEQLLKKGAYALLADDNDEIVKQFCADDIDTILAKRTR 623
BLAST of mRNA_S-dermatodea_contig1272.1665.1 vs. uniprot
Match: A0A7S1YB59_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YB59_9STRA) HSP 1 Score: 640 bits (1650), Expect = 4.050e-198 Identity = 348/657 (52.97%), Postives = 441/657 (67.12%), Query Frame = 1
Query: 1240 FKNTNELRDYQRRGVNWMVSCWKKKRRGCVLADEMGLGKTVQVVAMLNYVFANSEREKGPFLVVVPLTTIEHWRREVEAWTDMNLCMYHDNGGRDMRDLIREYEWYYSGRSK--RVLKFHVLVTTYDDVITDAEMLAQVPWRAVVVDEAHRMRNKNSALLGCLQQVVHNGVTVHAYQHRVLMTGTPMQNIKEELWPLMNFVDQSNFPDLQRFQDKYCKGEPGHEVDEARALRRRLKPYMLRRRKEDVTKDIPPKEETIIDVELTMVQKKYYRAIYERNHSVLNKVGAGAGKAPSLMNIQMELRKCCNHPFMVRGVEDHEVDNIVATMLEEAQKVD---PDNSTSRLDHQKLRQLRLEKGLIHTSGKMVLLDKLLPKLKSEGHKVLIFSQFIGMLDMVQEFLALRGHKHERLDGRTTGNERQKSIDRFNREPNSFVFLLSTRAGGVGINLTAADTCIIYDSDWNPQNDVQAMARCHRIGQTKSVMVYRLITRNCFESEMFNRASMKLGLEQAVLG-----DAAGSLKPRDMEDLLKKGAYALTQMDEVDAMREFQDMDIDSILERKSRVLVEEPTAKGLGDDSDNDEESDKEDAPGAHRGDQHKVTWRSFGGGAKTGPSLEDPDFWRKVMPDVMTPESMVSKLDEFENFKEGDEPAKK 3180
+KN N+LRDYQ GVNW+ S W K+ GC+LADEMGLGKTVQ+V+ + +++ +E K PF+VVVPL+T+EHWRRE +AWTDM C+YHD R RD++REYEWY+ R LKF VLVTTYD +I D +++ VPWRA VVDEAHR+RN+ LL C++++ G + +Q RVLMTGTP+QN +ELW L+NF++ FP L FQ ++ +V+ AL+R + P+MLRR KEDV KDIP KEET+IDVELT +QK+YYRAI+E+NH+ LN +GA AP LMNIQMELRKCCNHP+++ VE E + LE+ K D P+ L+ E G I TSGKMVLLDKLLPKL+ EGHKVL+FSQ + MLD++ E+ RG ++ERLDGR GNERQK+IDRF E +SF+FLLSTRAGGVGINLTAAD CII+DSDWNPQND+QA ARCHRIGQTK V +YRL+T FE EMF+RAS KLGLEQAVLG + ++ME+LLKKGAYAL + DE D EF DI+SIL +++R V E + Q + +S +++DP+FW+KVMPD +TP M+ KLDE EG P KK
Sbjct: 1211 YKNGNKLRDYQVDGVNWLASTWYKQH-GCILADEMGLGKTVQIVSYIEHLY-RAEGIKRPFIVVVPLSTVEHWRREFQAWTDMVCCVYHDRQ-RIWRDVLREYEWYFEDRPHTFEYLKFDVLVTTYDTLIADFDVVGLVPWRAAVVDEAHRLRNQKGKLLECMKEISARGTLHYGFQSRVLMTGTPLQNNTQELWTLLNFIEPYQFPSLDDFQMRFGNMANREQVE---ALQRMISPFMLRRVKEDVAKDIPAKEETVIDVELTSIQKQYYRAIFEQNHTFLN-MGASRTNAPKLMNIQMELRKCCNHPYLLDNVEHRESQRLFNEYLEKG-KFDGKSPEEQQFMLN---------ESGYIMTSGKMVLLDKLLPKLRDEGHKVLVFSQMVKMLDLISEYCEFRGFRYERLDGRVRGNERQKAIDRFETEEDSFMFLLSTRAGGVGINLTAADICIIFDSDWNPQNDIQAQARCHRIGQTKDVRIYRLVTSRSFEMEMFDRASKKLGLEQAVLGTFNHDNEEDKPTTKEMENLLKKGAYALLE-DENDEANEFCSDDIESILAKRTRTRVVEGAKSA------------------SWLNKQGMIVSKSKFSADGDNVNVDDPNFWQKVMPDFVTPSIMLGKLDELTELIEGTAPKKK 1831
BLAST of mRNA_S-dermatodea_contig1272.1665.1 vs. uniprot
Match: B8LC70_THAPS (Chromodomain-helicase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LC70_THAPS) HSP 1 Score: 595 bits (1535), Expect = 1.530e-196 Identity = 317/583 (54.37%), Postives = 408/583 (69.98%), Query Frame = 1
Query: 1222 DGKVPD-FKNTNELRDYQRRGVNWMVSCWKKKRRGCVLADEMGLG---------KTVQVVAMLNYVFANSEREKGPFLVVVPLTTIEHWRREVEAWTDMNLCMYHDNGGRDMRDLIREYEWYYSGR--SKRVLKFHVLVTTYDDVITDAEMLAQVPWRAVVVDEAHRMRNKNSALLGCLQQVVHNGVTVHAYQHRVLMTGTPMQNIKEELWPLMNFVDQSNFPDLQRFQDKYCKGEPGHEVDEARALRRRLKPYMLRRRKEDVTKDIPPKEETIIDVELTMVQKKYYRAIYERNHSVLNKVGAGAGKAPSLMNIQMELRKCCNHPFMVRGVEDHEVDNIVATMLEEAQKVDPDNSTSRLDHQKLRQLRLEKGLIHTSGKMVLLDKLLPKLKSEGHKVLIFSQFIGMLDMVQEFLALRGHKHERLDGRTTGNERQKSIDRFNREPNSFVFLLSTRAGGVGINLTAADTCIIYDSDWNPQNDVQAMARCHRIGQTKSVMVYRLITRNCFESEMFNRASMKLGLEQAVLG-----DAAGSLKPRDMEDLLKKGAYALTQMDEVDAMREFQDMDIDSILERKSRVLV 2919
D KVP +K+ ++LRDYQ GVNW+ SC+ K R G +LADEMGLG +TVQ+V L ++F E+ GPFLVVVPL+T+EHWRRE E WT++ C+YHD R RD++REYEWYY R + LKF+VLVTTYD +I D +++ VPWR VVDEAHR+RN LL C++++ G + YQ RVLMTGTP+QN +ELW L+NF++ S F L+ F+ + +V+ AL+ ++ P+MLRR KEDV KDIP KEET+IDVELT +QK+YYRAI+E NH+ L+ +G+ AP LMNIQMELRKCCNHPF++ G+E E++ + + D + H L E G + +SGKMVLLDKLLPKL+ EGHKVLIFSQF+ MLD++ ++ R ++ERLDGR GNERQK+IDRF E +SFVFLLSTRAGGVGINLTAAD CII+DSDWNPQNDVQA ARCHRIGQTK VM+YRL+T FE EMF+RAS KLGLEQAVLG +A ++ME LLK+GAYAL + + + +EF DI++IL +++R +
Sbjct: 59 DPKVPHIYKDGHKLRDYQVDGVNWLSSCYYK-RTGAILADEMGLGAHPCLSLYPRTVQIVTYLEHLF-RVEKLNGPFLVVVPLSTVEHWRREFEGWTNLQCCVYHDRQ-RVWRDVLREYEWYYEDRPHTPDYLKFNVLVTTYDTLIGDFDVIGDVPWRVTVVDEAHRLRNVKGKLLECMKEISAKGTLKYGYQSRVLMTGTPLQNNTQELWTLLNFIEPSLFQSLEEFEHNFGNMANREQVE---ALQHKISPFMLRRVKEDVAKDIPAKEETVIDVELTSIQKQYYRAIFEHNHAFLS-MGSSKAVAPKLMNIQMELRKCCNHPFLLDGIESREMEKRHEELSASGEL---DGKSPEEQHHILN----EYGYVMSSGKMVLLDKLLPKLRQEGHKVLIFSQFVKMLDLISDYCDFREFRYERLDGRVRGNERQKAIDRFETEKDSFVFLLSTRAGGVGINLTAADICIIFDSDWNPQNDVQAQARCHRIGQTKDVMIYRLVTSRTFEQEMFDRASKKLGLEQAVLGTFGQDEAEDKPTNKEMEQLLKRGAYALLEDENDEQGKEFVADDIENILAKRTRNFI 627 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1272.1665.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1272.1665.1 >prot_S-dermatodea_contig1272.1665.1 ID=prot_S-dermatodea_contig1272.1665.1|Name=mRNA_S-dermatodea_contig1272.1665.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=1145bp VKPVDDDFTRAASSAGVVGEAMVEAEHRVIEELGQKRRLLMAVNESKAKPback to top mRNA from alignment at S-dermatodea_contig1272:828..13502+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1272.1665.1 ID=mRNA_S-dermatodea_contig1272.1665.1|Name=mRNA_S-dermatodea_contig1272.1665.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=12675bp|location=Sequence derived from alignment at S-dermatodea_contig1272:828..13502+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1272:828..13502+ >mRNA_S-dermatodea_contig1272.1665.1 ID=mRNA_S-dermatodea_contig1272.1665.1|Name=mRNA_S-dermatodea_contig1272.1665.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=6870bp|location=Sequence derived from alignment at S-dermatodea_contig1272:828..13502+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |