mRNA_S-dermatodea_contig1269.1649.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig1269.1649.1
Unique NamemRNA_S-dermatodea_contig1269.1649.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig1269.1649.1 vs. uniprot
Match: D7FNT7_ECTSI (Procollagen-lysine 5-dioxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNT7_ECTSI)

HSP 1 Score: 846 bits (2185), Expect = 1.830e-302
Identity = 438/621 (70.53%), Postives = 494/621 (79.55%), Query Frame = 1
Query:    1 MSLPVKLQAGILSWVGDIPPVPTKYVVPSQAGKDADKESEAAGLLDPCLSPADLFCLSTAGTAAGSPGFVIKDAFLGRDQALRVYEAALDVEKRGEMKPAGMGRGNDVWHGE-SRGDSILWITDGIRGTGSFPEALEQLLRSLSALKGPLNGEQGGGCGL----SSAGLHLV-DTTSVQLARYPGDGQGYVRHRDTPKSAEDSEEDDRKITAIYYLNPNWEASMGGQLRVHLDP-------DNGVRNL---DEGGGRTWDVEPLLDRLVLFRSDLVDHEVLPAFSPRLAVTLWFYGRQLGLPSRPSPLPASSFKAESLASQSPKPAKKLDAGDDTRDRVRPLPAPTGGSGGHADEASVFVSVVSYRDSEANPTIVDLLARASNPGRVCVGLVWQLDLDVAEDVAMLRVTPGGDELRGGRVRSLLMPAADAAGPSWARRVAQSLWKGEKYVLQIDSHTRFRPGWDSYLIRTLQSCPSFKPVLTTYPVGYQLPHKIPAGEMRPTLLVPDGFGPEGMLRQTGRLLLRTARDPLPSPLWASGFSFSGSALLLEVPYDPGLRHTFFGEEVSMAARMFTRGWDLFAPPQTVVYHLWSRAHRPSFRQVSTAATQREEARAQRRLRKLL 1815
            M+LP K+QA I+SW+ +     +   + S   + A  E + +    P ++PADLF LS+ G AAGSPG V+KD FLGR+QAL+ + AAL+VE RGEMKPAGMGR + VWHG+ SRGDSI+WIT+GIRG G  PE LE LL  LSAL+GPLN     GCGL    S+ GL LV DTTSVQLARYPGDG+GYVRHRDTP+SA+DSEE +RKITA+YYLNP+W  SMGGQLRVHLD        + G R     +E  GR WD+EP+LDRLVLFRSDLV+HEVLPA +PRLAVTLWFYGRQLGLP+ PS       ++ S     P P ++L AGDDTRD+VRPLP+P G    HA EAS+FVSVVSYRDSEANPT+VDL ARA+NP RV VGLVWQL+  VAED AM R TPGG E+RGGRVRSL MPAADAAGPSWARRVAQS+WKGEKYVLQIDSHTRFRPGWDSYLI TLQSCPSFKP+LTTYPVGYQLPHKIPAGE RPTLLVPDGFGP+GMLRQTGRLLLR ARDPLPSPLWASGFSFS SA+L+EVPYDPGLRH+FFGEE SMAARMFTRGWD FAPPQ VVYHLW+R HR SFRQ ST   + EEA A RRLR LL
Sbjct:    1 MALPAKVQASIMSWLDE-----SSTAIASGQSEPAAAEDDYSY---PVITPADLFSLSSGGFAAGSPGVVVKDGFLGREQALQAHAAALEVENRGEMKPAGMGRRDGVWHGQQSRGDSIMWITEGIRGKGELPEGLENLLMRLSALRGPLND----GCGLPTTSSAPGLGLVKDTTSVQLARYPGDGRGYVRHRDTPRSAQDSEEAERKITALYYLNPDWRPSMGGQLRVHLDSRPEAAAEEGGPRPAGEEEEKAGRKWDIEPVLDRLVLFRSDLVEHEVLPASAPRLAVTLWFYGRQLGLPASPS------TRSPSSVPPLPAPEQQLAAGDDTRDKVRPLPSPAGSGAAHAAEASIFVSVVSYRDSEANPTVVDLFARATNPERVSVGLVWQLEAGVAEDEAMHRATPGGKEIRGGRVRSLFMPAADAAGPSWARRVAQSIWKGEKYVLQIDSHTRFRPGWDSYLIHTLQSCPSFKPILTTYPVGYQLPHKIPAGETRPTLLVPDGFGPDGMLRQTGRLLLRKARDPLPSPLWASGFSFSASAVLVEVPYDPGLRHSFFGEEASMAARMFTRGWDFFAPPQAVVYHLWTRGHRASFRQNSTKEAEAEEAAANRRLRWLL 603          
BLAST of mRNA_S-dermatodea_contig1269.1649.1 vs. uniprot
Match: A0A6H5L271_9PHAE (Procollagen-lysine 5-dioxygenase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L271_9PHAE)

HSP 1 Score: 822 bits (2122), Expect = 1.350e-292
Identity = 425/603 (70.48%), Postives = 476/603 (78.94%), Query Frame = 1
Query:    1 MSLPVKLQAGILSWVGDIPPVPTKYVVPS-QAGKDADKESEAAGLLDPCLSPADLFCLSTAGTAAGSPGFVIKDAFLGRDQALRVYEAALDVEKRGEMKPAGMGRGNDVWHGE-SRGDSILWITDGIRGTGSFPEALEQLLRSLSALKGPLNGEQGGGCGL----SSAGLHLV-DTTSVQLARYPGDGQGYVRHRDTPKSAEDSEEDDRKITAIYYLNPNWEASMGGQLRVHLDP-------DNGVRNL---DEGGGRTWDVEPLLDRLVLFRSDLVDHEVLPAFSPRLAVTLWFYGRQLGLPSRPSPLPASSFKAESLASQSPKPAKKLDAGDDTRDRVRPLPAPTGGSGGHADEASVFVSVVSYRDSEANPTIVDLLARASNPGRVCVGLVWQLDLDVAEDVAMLRVTPGGDELRGGRVRSLLMPAADAAGPSWARRVAQSLWKGEKYVLQIDSHTRFRPGWDSYLIRTLQSCPSFKPVLTTYPVGYQLPHKIPAGEMRPTLLVPDGFGPEGMLRQTGRLLLRTARDPLPSPLWASGFSFSGSALLLEVPYDPGLRHTFFGEEVSMAARMFTRGWDLFAPPQTVVYHLWSRAHRPSFRQVS 1758
            M LP K+QA I+SW+ +          PS Q+G    ++        P L+PADLF LS+ G AAGSPG V+KD FLGR+QAL+ + AAL+VE  G+MKPAGMGRG+ VW G+ SRGDSI+WIT+GIRG G  PE LE LL  L AL+GPLN     GCGL    S+ GL LV DTTSVQLARYPGDG+GYVRHRDTP+SA+DSEE +RKITA+YYLNP+W  SMGGQLRVHLD        + G R     +E  GR WD+EP+LDRLVLFRSDLV+HEVLPA +PRLAVTLWFYGRQLGLP+ PS    SS          P P ++L  GDDTRD VRPLP P G    HA EAS+FVSVVSYRDSEANPT+VDL ARA+NPGRV VGLVWQL+  VAED AM R TPGG E+RGGRVRSL MPA +AAGPSWARRVAQSLWKGEKYVLQIDSHTRFRPGWDSYLI+TLQSCPSFKPVLTTYPVGY++PHKIPAGE RPTLLVPDGFGP+GMLRQTGRLLLR ARDPLPSPLWASGFSFS SA+L+EVPYDPGLRH+FFGEE SMAARMFTRGWD FAPPQ VVYHLW+R HR SFRQ+S
Sbjct:    1 MVLPAKVQASIMSWLDE-----RSTAAPSGQSGPSVAQDDYTY----PVLTPADLFSLSSGGFAAGSPGVVVKDGFLGREQALQAHAAALEVENGGKMKPAGMGRGDGVWLGQQSRGDSIMWITEGIRGKGELPEGLENLLMRLFALRGPLND----GCGLPTTSSATGLGLVKDTTSVQLARYPGDGRGYVRHRDTPRSAQDSEEAERKITALYYLNPDWRPSMGGQLRVHLDSRREAAAEEGGPRPAGEEEEKAGRKWDIEPVLDRLVLFRSDLVEHEVLPALAPRLAVTLWFYGRQLGLPASPSARRPSSVPPL------PAPEQQLAPGDDTRDNVRPLPPPDGSGAAHAAEASIFVSVVSYRDSEANPTVVDLFARAANPGRVSVGLVWQLEAGVAEDEAMRRATPGGKEIRGGRVRSLFMPAVEAAGPSWARRVAQSLWKGEKYVLQIDSHTRFRPGWDSYLIQTLQSCPSFKPVLTTYPVGYEMPHKIPAGETRPTLLVPDGFGPDGMLRQTGRLLLRKARDPLPSPLWASGFSFSASAMLVEVPYDPGLRHSFFGEEASMAARMFTRGWDFFAPPQAVVYHLWTRGHRASFRQIS 584          
BLAST of mRNA_S-dermatodea_contig1269.1649.1 vs. uniprot
Match: A0A835YQS0_9STRA (Procollagen-lysine 5-dioxygenase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQS0_9STRA)

HSP 1 Score: 462 bits (1190), Expect = 2.440e-152
Identity = 280/594 (47.14%), Postives = 357/594 (60.10%), Query Frame = 1
Query:  139 PCLSPADLFCLSTAGTAAGSPGFVIKDAFLGRDQALRVYEAALDVEKRGEMKPAGMGRGNDVWHGES-RGDSILWITDGIR----GTGSFPEALEQLLRSLSALKGPLNGEQGGGCGLSSAGLHLVDTTSVQLARYPGDGQGYVRHRD---------TPKSAEDSEEDDRK-ITAIYYLNPNWEASMGGQLRVHLDPDNGVRNLDEGGGRTWDVEPLLDRLVLFRSDLVDHEVLPAFSPRLAVTLWFYGRQLGLPSRPSPLPASSFKAE-----SLASQSPKPAKKLDAGDDTRDRVRPLPAPTGGSGGHADE--ASVFVSVVSYRDSEANPTIVDLLARASNPGRVCVGLVWQLDLDVAEDVAMLRVTPGGDELRGGRVRSLLMPAADAAGPSWARRVAQSLWKGEKYVLQIDSHTRFRPGWDSYLIRTLQSCPSFKPVLTTYPVGYQLPHKIPAG--EMRPTLLVPDGFGPEGMLRQTGRLLLRT--------ARDPLPSPLWASGFSFSGS-ALLLEVPYDPGLRHTFFGEEVSMAARMFTRGWDLFAPPQTVVYHLWSRAHRPSFRQVSTAATQREEARAQRRLRKLLGV 1821
            P L+PADLF L     A   P  V+KDA +G   A      A  V+  G M+PAGMG G   W  +  RGD +LW+T GI     GTG     LE +LR L+++   L   + G        L LV  TSVQLA YPG G+GYV+H D         T  SAED++   R+ +TA+YYLNP+W A  GG LRVHL  + G      GGG TWDVEP+LDR+VLFRS++V+HEVLP+F+PR A+T+WFYGR    P R +P  A +  A                  L A  DTR ++ PLP       G A +  + +FVS+VSYRD EA PTI DLL+ A+ P RV VGLV         +               GRV +++M AA+AAGP WAR VA +LW+GE YVLQ DSH RFR  WD+YL+ TL+ CPS +P+LTTYP GY+LP+++P G  + + T+L P GFG +GMLRQ  R + +         A +PL S LWA+GF+F  S ALL +  YDP LRH FFGEE +MAAR+FT G+D +APPQ V YHLW+RAHRPSFR+  TA T RE  R + R+R +LG+
Sbjct:    3 PVLTPADLFVLG----ARSGPAAVVKDALMGGAAARLASGDARHVQAGGYMRPAGMGAGARRWQDDGYRGDHLLWVTGGIADQPDGTGP---GLEAVLRKLASIGKELRASRLG------KELGLVPRTSVQLAWYPGAGRGYVKHLDADGGVHAESTSSSAEDTDSSPRRTVTAVYYLNPDWCARDGGCLRVHLGGNKGAGGGQLGGG-TWDVEPVLDRVVLFRSNIVEHEVLPSFAPRFALTMWFYGRP---PRRAAPAAAPTMLAPVSWPXXXXXXXXXXXAPLTAEGDTRAQLAPLPL------GDAPDLTSEIFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVLHSGAAATAEGXXXXXXXXLPPALRGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMRFRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFGADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFRENETAETARERQRGEARIRAVLGM 573          
BLAST of mRNA_S-dermatodea_contig1269.1649.1 vs. uniprot
Match: A0A329RXD0_9STRA (Procollagen-lysine 5-dioxygenase n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RXD0_9STRA)

HSP 1 Score: 384 bits (986), Expect = 6.810e-122
Identity = 238/567 (41.98%), Postives = 315/567 (55.56%), Query Frame = 1
Query:  145 LSPADLFCLSTAGTAAGSPGFVIKDAFLGRDQALRVYEAALDVEKRGEMKPAGMGRGNDVWHGES-RGDSILWITDGIRGTGSFPEALEQLLRSLSALKGPLNGEQGGGCGLSSAGLHLVDTTSVQLARYPGDGQGYVRHRDTPKSAEDSEEDD-------RKITAIYYLNPNWEASMGGQLRVHLDPDNGVRNLDEGGGRTWDVEPLLDRLVLFRSDLVDHEVLPAFSPRLAVTLWFYGRQLGLPSRPSPLPASSFKAESLASQSPKPAKKLDAGDDTRDRVRPLPAPTGGSGGHADEASVFVSVVSYRDSEANPTIVDLLARASNPGRVCVGLVWQLDLDVAEDVAMLRVTPGGDELRGGRVRSLLMPAADAAGPSWARRVAQSLWKGEKYVLQIDSHTRFRPGWDSYLIRTLQSCPSFKPVLTTYPVGYQLPHKIPAGEMRPTLLVPDGFGPEGMLRQTGRLLLRTARDPLPSPLWASGFSFSGSALLLEVPYDPGLRHTFFGEEVSMAARMFTRGWDLFAPPQTVVYHLWSRAHRPSFRQVSTAATQREEARAQRRLRKLLGV 1821
            L+P++LF L        SPGFVIK+AFLGR  AL V +A  ++   G    A +G G ++    + RGD I WI      T S    +  L R +  L   L           S  L L +  S Q A +PGDG  +V+H DT  +A   E          R +T +YYLN  WE   GG LRVHL     + +        WDV P LD L++FRS  V+HEV+P +  R AVT+W+YG          P  AS   A S A   P                RPLP+ TG    HA+ AS+FVS+ SYRDSE   T+ +LL +A+ PGRV +G+  Q D D  +  A L       +    +VR   +    AAGP  AR  AQ LW+GE++ LQIDSH RFRPGWD +LI  L+ CPS KP+LTTYP+GY LP++I + E RPTLL    F   GMLRQT ++L + +  PLPS  WA+GF+FS S ++ EVPYD  LR  FFGEE SMAAR++T GWD F P +TVVYHLW+R +RP F+++ +  T+R  + +   +++LL +
Sbjct:   69 LNPSELFALKHPE----SPGFVIKEAFLGRQNALAVRDALTELAASGTFHEAKVGAGQNLRSDRAVRGDKIHWIQT---PTESVSPVILHLRRQVETLVYGLK--------KVSPELDLRNVVSTQFAIFPGDGARFVKHVDTYSNAHSDERGGMSKDGLVRLVTCVYYLNDQWEPEHGGHLRVHLKASKLLPSCH------WDVSPKLDTLMVFRSLDVEHEVMPTYRERKAVTIWYYGE---------PPEASPAIARSEALPVP----------------RPLPSITGNKSDHAERASIFVSIPSYRDSECRHTVDNLLTQATFPGRVSIGICLQTD-DDDDTRAYLE-----SKYSSSKVRVHGVDFRKAAGPCVARAQAQKLWQGEEFYLQIDSHMRFRPGWDCFLINELEKCPSPKPILTTYPLGYTLPNEI-SSECRPTLLCASTFDSLGMLRQTSKILAKISTKPLPSLFWAAGFAFSSSKVIEEVPYDETLRFLFFGEESSMAARLWTSGWDFFTPSETVVYHLWTRTYRPVFQELESDETKRYRSASAHYVKQLLQI 582          
BLAST of mRNA_S-dermatodea_contig1269.1649.1 vs. uniprot
Match: A0A833TAL9_PHYIN (Procollagen-lysine 5-dioxygenase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TAL9_PHYIN)

HSP 1 Score: 382 bits (982), Expect = 2.540e-121
Identity = 238/570 (41.75%), Postives = 324/570 (56.84%), Query Frame = 1
Query:  145 LSPADLFCLSTAGTAAGSPGFVIKDAFLGRDQALRVYEAALDVEKRGEMKPAGMGRGNDVWHGES-RGDSILWI---TDGIRGTGSFPEALEQLLRSLSALKGPLNGEQGGGCGLSSAGLHLVDTTSVQLARYPGDGQGYVRHRDTPKSAEDSEEDD-------RKITAIYYLNPNWEASMGGQLRVHLDPDNGVRNLDEGGGRTWDVEPLLDRLVLFRSDLVDHEVLPAFSPRLAVTLWFYGRQLGLPSRPSPLPASSFKAESLASQSPKPAKKLDAGDDTRDRVRPLPAPTGGSGGHADEASVFVSVVSYRDSEANPTIVDLLARASNPGRVCVGLVWQLDLDVAEDVAMLRVTPGGDELRGGRVRSLLMPAADAAGPSWARRVAQSLWKGEKYVLQIDSHTRFRPGWDSYLIRTLQSCPSFKPVLTTYPVGYQLPHKIPAGEMRPTLLVPDGFGPEGMLRQTGRLLLRTARDPLPSPLWASGFSFSGSALLLEVPYDPGLRHTFFGEEVSMAARMFTRGWDLFAPPQTVVYHLWSRAHRPSFRQVSTAATQREEARAQRRLRKLLGV 1821
            LSP+DLF L        SPG V+K++FLGR  AL V +A  ++   G    A +G G ++ +    RGD I WI    D    T S   A+  L R + +L   L           S  L L +  S Q A +PGDG  +V+H DT  +A  +E++        R IT +YYLN  WE   GG LRVHL     +          WDV P LD L++FRS  V+HEV+P +  R AVT+W+YG+    PS+ +P  AS  +  S+                      PLP+ TG +  HA++ASVFV++ SYRDSE   T+ +LLA+A+ P R+ +G+  Q D D  +  A L       +    +VR   +   +AAGP  ARR AQ L++GE   LQIDSH RFRPGWD +LI  L+ CPS KP+LTTYP+GY LP++I + E RPTLL    F   GMLRQT ++L + +  PLPS  WA+GF+FS SA++ EVPYD  LR  FFGEE SMAAR++T GWD F P + VVYHLW+RA+RP F+++ +  T+R    +   +++LL +
Sbjct:   69 LSPSDLFALKHPD----SPGIVVKESFLGRQSALAVRDALTELATSGTFHEAKVGAGQNLRNDRMVRGDKIHWIQTPNDLSAPTESVNPAILHLRRQVESLVYGLK--------KVSPELDLRNVVSTQFAVFPGDGARFVKHVDTYLNAHRNEQEGVSKDGLVRLITCVYYLNDRWEPEHGGHLRVHLKDSKLLPAYH------WDVPPNLDTLLVFRSLDVEHEVMPTYRERKAVTIWYYGK----PSQAAP--ASRTETSSVPC--------------------PLPSTTGSNSDHAEQASVFVAIPSYRDSECRHTVDNLLAQATFPERISIGICLQTD-DEDDTQAYLE-----SKYSTSQVRVHWVDYREAAGPCVARRQAQKLYQGEDLYLQIDSHMRFRPGWDCFLINELEKCPSAKPILTTYPLGYTLPNEI-STECRPTLLCASSFDSLGMLRQTSKILAKKSTKPLPSLFWAAGFAFSSSAIIEEVPYDETLRFLFFGEESSMAARLWTSGWDFFTPSEAVVYHLWTRAYRPVFQELESDDTKRYRTSSAHYVKQLLRI 587          
BLAST of mRNA_S-dermatodea_contig1269.1649.1 vs. uniprot
Match: W2QK95_PHYPN (Procollagen-lysine 5-dioxygenase n=9 Tax=Phytophthora TaxID=4783 RepID=W2QK95_PHYPN)

HSP 1 Score: 372 bits (956), Expect = 1.940e-117
Identity = 238/598 (39.80%), Postives = 324/598 (54.18%), Query Frame = 1
Query:   82 PSQAGKDADKESEAAG--LLDPC-----LSPADLFCLSTAGTAAGSPGFVIKDAFLGRDQALRVYEAALDVEKRGEMKPAGMGRGNDVWHGES-RGDSILWI---TDGIRGTGSFPEALEQLLRSLSALKGPLNGEQGGGCGLSSAGLHLVDTTSVQLARYPGDGQGYVRHRDTPKSAEDSEEDD-------RKITAIYYLNPNWEASMGGQLRVHLDPDNGVRNLDEGGGRTWDVEPLLDRLVLFRSDLVDHEVLPAFSPRLAVTLWFYGRQLGLPSRPSPLPASSFKAESLASQSPKPAKKLDAGDDTRDRVRPLPAPTGGSGGHADEASVFVSVVSYRDSEANPTIVDLLARASNPGRVCVGLVWQLDLDVAEDVAMLRVTPGGDELRGGRVRSLLMPAADAAGPSWARRVAQSLWKGEKYVLQIDSHTRFRPGWDSYLIRTLQSCPSFKPVLTTYPVGYQLPHKIPAGEMRPTLLVPDGFGPEGMLRQTGRLLLRTARDPLPSPLWASGFSFSGSALLLEVPYDPGLRHTFFGEEVSMAARMFTRGWDLFAPPQTVVYHLWSRAHRPSFRQVSTAATQREEARAQRRLRKLLGV 1821
            P     DA  +S A+   +LD       L+P++LF          SPGFVIK+AFLG  +AL V +A  ++   G    A +G G ++ +  + RGD I WI   +D      S   A+  L R + +L   L          +S  + L +  S Q A +PGDG  +V+H DT  +    E          R IT +YYLN  WE   GG LRVH      V++        WDV P LD LVLFRS  V+HEV+P +  R AVT+W+YG+         P  ASS  A +     P                RPLP+ TG    H  + S+FV++ SYRDSE   T+ +LLARA+ P R+ +G+  Q D +     A L+      +    +V    +    AAGP  AR  AQ LW+GE++ LQIDSH RFRPGWD +LI  L  CPS KP+LTTYP+GY LP++I + E RPTLL    F   GMLRQT ++L   +  PLPS  WA+GF+FS S ++ +VPYD  LR  FFGEE SM AR++T GWD F P +TVVYHLW+RA+RP F+++ +  TQR  + +   ++++L +
Sbjct:   41 PQSTNTDAKTQSNASSPIVLDASHHAAKLNPSELFTFKHPD----SPGFVIKEAFLGHREALEVRDALTELATSGTFHDAKVGAGQNLRNDRAVRGDRIHWIQTPSDLNAPAQSIHPAILHLRRQVESLVYGLR--------KASPEMDLRNIVSTQFAIFPGDGARFVKHVDTYSNVHKDERGGISKDGLVRLITCVYYLNDQWEIEHGGYLRVH------VKDSKHLPACHWDVPPKLDTLVLFRSRDVEHEVMPTYRERKAVTIWYYGK---------PSKASSALARTEVLSVP----------------RPLPSITGNEANHTTQPSIFVAIPSYRDSECRHTVDNLLARATFPERISIGICLQTDENDGTS-AYLK-----SKYSTSKVCVQWVDYRQAAGPCVARAQAQKLWQGEEFYLQIDSHMRFRPGWDCFLISELGKCPSSKPILTTYPLGYTLPNEI-STECRPTLLCASSFDSLGMLRQTSKILSTKSTKPLPSLFWAAGFAFSSSKVIEQVPYDATLRFLFFGEESSMTARLWTSGWDFFTPSETVVYHLWTRAYRPVFQELESGETQRYRSASAHYVKQILQI 588          
BLAST of mRNA_S-dermatodea_contig1269.1649.1 vs. uniprot
Match: A0A7S2SW69_9STRA (Procollagen-lysine 5-dioxygenase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW69_9STRA)

HSP 1 Score: 365 bits (938), Expect = 8.240e-115
Identity = 238/558 (42.65%), Postives = 304/558 (54.48%), Query Frame = 1
Query:  259 AALDVEKRGEMKPAGMGRGNDVWH-GESRGDSILWI--TD-----GIRGTGSFPEALEQLLRSLSALKGPLNGEQGGGCGLSSAGLHLVDTTSVQLARYPGDGQGYVRHRDTPKSAEDSEEDDRKITAIYYLNPNWEASMGGQLRVHLDPDNGVRNLDEGGGR---TWDVEPLLDRLVLFRSDLVDHEVLPAFSPRLAVTLWFYGRQLGLPSRPSPLPASSFKAESLASQSP--KPAKKLDAG--DDTRDRVRPLPA-------------PTGG-----------------SGGHADEASVFVSVVSYRDSEANPTIVDLLARASNPGRVCVGLVWQLDLDVAEDVAMLRVTPGGDELRGGRVRSLLMPAADAAGPSWARRVAQSLWKGEKYVLQIDSHTRFRPGWDSYLIRTLQSCPSFKPVLTTYPVGYQLPHKIPAGEMRPTLLVPDGFG-PEGMLRQTGRLLLRTARDPLPSP-LWASGFSFSGSALLLEVPYDPGLRHTFFGEEVSMAARMFTRGWDLFAPPQTVVYHLWSRAHRPSFRQVSTAATQREEARA 1791
            AA   ++   ++PA MGRG   W  G  RGD + WI  TD      +RG     E L + L+           +       SS  L L    S QLARYPG G+GYVRH+D    A  + E+ R  TAI+YLN  W A+ GG+LR+ L   +G      GG R    WDVEP+++RL++FRS  ++HEVLPA++PR+AVT WFYG   G  + P           SLA  SP  K  +K   G  +   D+  P  A             PT                   S  H   +++FVS+ S+RDSE   T++DL   A  P R+ VG+V Q D    ED+      P        RVR L M    A GP  AR +AQ LW+GE YVLQIDSH RFRP WD+YL+  LQ CPS KPVLTTYP GY LP+ +P  E RPTLL P  +G  +G+LRQTG+LL      P+    LWA+GF+F+ +A++ EVPYDP L   FFGEE+SMAAR++T G+D FAPP+ VVYHLW+R HRP    V TA    E  +A
Sbjct:    8 AASGGDQPRRLRPARMGRGLGEWQAGAKRGDELAWIHSTDEDLGPSLRGFLGVMEGLREELKHRWGCSADSRRQ-------SSRRLGLTSRLSHQLARYPGSGEGYVRHKDAYPEA--AGEESRLFTAIFYLNRGWSAADGGKLRLFLGEGHGPAAAGPGGAREEGVWDVEPVMNRLIIFRSHDLEHEVLPAWAPRIAVTTWFYGVLEG--ATPXXXXXXXXLLSSLALPSPVTKDPRKDGVGGLEVEGDQSSPTAAAHPESLLLLHHNVPTSAHPSSLPPCSPPRRSLQVSEDHDGNSTIFVSIASFRDSECQHTVLDLFRTAQYPERLTVGIVGQYD--AVEDIRCFDQAPL-PLAWARRVRVLHMDWQQAEGPCLARHLAQQLWRGEDYVLQIDSHMRFRPNWDTYLLHCLQQCPSSKPVLTTYPTGYTLPNHVP-DESRPTLLCPSHYGGADGVLRQTGKLLAARQSAPIACRGLWAAGFNFAAAAVIREVPYDPTLSFLFFGEEISMAARLWTHGYDFFAPPEAVVYHLWTRTHRP----VRTAGKDEEHRQA 546          
BLAST of mRNA_S-dermatodea_contig1269.1649.1 vs. uniprot
Match: A0A485KTR2_9STRA (Procollagen-lysine 5-dioxygenase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTR2_9STRA)

HSP 1 Score: 366 bits (939), Expect = 1.070e-114
Identity = 241/616 (39.12%), Postives = 331/616 (53.73%), Query Frame = 1
Query:   64 PTKYVVPSQAGKDADKESEAAGLLDPCLSPADLFCLSTAGT---------AAGSPGFVIKDAFLGRDQALRVYEAALDVEKRGEMKPA--GMGRGNDVWH--GESRGDSILWITDGIRGTGSFPEALEQLLRSLSALKGPLNGEQGGGCGLSSAGLHLVDTTSVQLARYPGDGQGYVRHRDTPKSAEDSEEDDRKITAIYYLNPNWEASMGGQLRVHLDPDNGVRNLDEGGGRTWDVEPLLDRLVLFRSDLVDHEVLPAFSPRLAVTLWFY--GRQLGLPSRP---SPLPASSFKAESLASQSPKP-------AKKLDAGDDTRDRVRPLPAPTGGSGGHADEASVFVSVVSYRDSEANPTIVDLLARASNPGRVCVGLVWQLDLDVAEDVAMLRVTPGGDELRGGRVRSLLMPAADAAGPSWARRVAQSLWKGEKYVLQIDSHTR-------FRPGWDSYLIRTLQSCPSFKPVLTTYPVGYQLPHKIPAGEMRPTLLVPDGFGPEGMLRQTGRLLLRTARDPLPSPLWASGFSFSGSALLLEVPYDPGLRHTFFGEEVSMAARMFTRGWDLFAPPQTVVYHLWSRAHRPSFRQVSTAATQREEARAQRRLRKLL 1815
            P    VPS A  DA K  E +    P L P         G           + SPGF++++ FLG   A+ V +A L +++  EM+ A  GMG+G DV      +RGD ++W++         P  ++ L++ +  L          G   ++  L + +  S Q A +PG+   +V+H DT           R IT +YYLNP+W+ S GGQLRVHL            G  +WDV P LD L+LFRS  V+HEVLP    RLA+T WFY       +P      +P  A++  A     ++ +P       ++ LD  D    R  PLP     S     + ++FVS+ S+RDSE  PT+  L A A+ P RV VGL  Q   D  +D A +       +  G +VR   M   DA GP  AR  AQ LW+GE+Y LQIDSH R       FRP WD+YL+  L  C + KP+LTTYP+GY LP++IP+ + RPTLL    F   G+LRQTG++L  +   PLP   WA+GF+FS + ++  VPYDP L H FFGEE SMAAR++T G+D FAPP+ VVYHLWSRAHRP F+     A ++E+A +  R+++LL
Sbjct:   38 PPSISVPSSAKTDASKAEETSS---PPLQPPPAVPRRPTGLNHSEVFVLRESSSPGFIVREDFLGDAPAMAVRDACLRLQQMHEMRDAEVGMGKGGDVTSHVAHARGDQLMWLS---HDESQVPPPIQHLMKHIERLVH--------GLVKAAPELGIRNIRSTQFAIFPGNNTRFVKHVDTYSHRPGLR---RCITCLYYLNPHWDLSHGGQLRVHL------------GESSWDVPPRLDTLLLFRSTDVEHEVLPTTVDRLALTTWFYCNADDANIPHTTRTANPASATAAAAPKTFPRASRPPCIRSDDSQPLDV-DMAPRRAPPLPTSISPS----PDDTIFVSIPSFRDSECAPTLQHLFATAACPARVVVGLCLQHADD--DDTAFV-------DKYGAQVRVTRMHHTDATGPCLARHAAQQLWRGERYHLQIDSHMRYESLVRSFRPHWDAYLVEQLHRCDATKPILTTYPMGYHLPNQIPS-DTRPTLLCASHFDTHGLLRQTGKVLKVSPPRPLPCSFWAAGFAFSEATVIQHVPYDPSLSHLFFGEENSMAARLWTHGYDFFAPPEAVVYHLWSRAHRPVFQDTRPTA-EKEKAASLARVQRLL 608          
BLAST of mRNA_S-dermatodea_contig1269.1649.1 vs. uniprot
Match: A0A8K1FD38_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FD38_PYTOL)

HSP 1 Score: 365 bits (938), Expect = 1.150e-114
Identity = 229/587 (39.01%), Postives = 322/587 (54.86%), Query Frame = 1
Query:   85 SQAGKDADKESEAAGLLDPCLSPADLFCLSTAGTAAGSPGFVIKDAFLGRDQALRVYEAALDVEKRGEMKPAGMGRGNDVWHGES-RGDSILWIT---DGIRGTGSFPEALEQLLRSLSALKGPLNGEQGGGCGLSSA--GLHLVDTTSVQLARYPGDGQGYVRHRDTPKS----AEDSEEDDRKITAIYYLNPNWEASMGGQLRVHLDPDNGVRNLDEGGGRTWDVEPLLDRLVLFRSDLVDHEVLPAFSPRLAVTLWFYGRQLGLPSRPSPLPASSFKAESLASQSPKPAKKLDAGDDTRDRVRPLPAPTGGSGGHADEASVFVSVVSYRDSEANPTIVDLLARASNPGRVCVGLVWQLDLDVAEDVAMLRVTPGGDELRGGRVRSLLMPAADAAGPSWARRVAQSLWKGEKYVLQIDSHTRFRPGWDSYLIRTLQSCPSFKPVLTTYPVGYQLPHKIPAGEMRPTLLVPDGFGPEGMLRQTGRLLLRTARDPLPSPLWASGFSFSGSALLLEVPYDPGLRHTFFGEEVSMAARMFTRGWDLFAPPQTVVYHLWSRAHRPSFRQVSTAATQREEARAQRRLRKLL 1815
            S  G DA  ++     +   L+P++LF L        SPGF++KD FLG   A RV  A +   K  E   AG+G G++  H ++ RGD I WI    D  R   +   A+  LLR +  L            G+ SA   L L + TS QLA +PGDG  +V+H DT  S    A+ S+   R IT +YYLNP+W  + GG LR  +D             + WDV P+LD L +FRS  V+HEVLP F  R+A+T+W+YG            PAS+  A  +    P  +  L        +V+P  + T  S     +  +FV++ SYRD E   T+ DLLA+A++P R+ +G+  Q + D   +       P         VR   +  + AAGP  AR +AQSLWK E+Y LQIDSH RFR GWD  L+  L+ CPS K +LTTYP+GY LP++I + + RP LL   GF  +GMLRQ  + L R A  P+PS  WA+GF+FS + ++ EV YD  LR  FFGEE SM+AR++T GWD FAP +  +YHLW+RA+RP F+++ +  T++    + + ++ +L
Sbjct:   73 SHIGMDAPLQASIVSTVK--LNPSELFVLKHPD----SPGFIVKDRFLGHSDAARVRNALVQFAKSAEFHQAGVGYGDNKRHEQAARGDRIHWIQRPRDLTRPDATLDAAIVHLLRQVERLV----------VGVKSAIPELDLRNVTSTQLAIFPGDGSRFVKHTDTYSSNHPSAKGSDNLVRLITCVYYLNPDWIPAHGGSLRFFVDDK-----------QQWDVPPVLDTLAVFRSRDVEHEVLPTFHERMALTIWYYG------------PASAANAPKIPQLHPAISSFL--APPAPPQVKPQASTTPSS----TQEMIFVAIPSYRDPECPHTVADLLAKATHPDRITIGICLQDEDDTMLEHLKETYPPT-------TVRIEWIHYSHAAGPCVARAMAQSLWKNEQYYLQIDSHMRFRHGWDVELLAQLKQCPSEKAILTTYPLGYTLPNEI-SSDTRPALLCASGFDDQGMLRQASKTLTRVADKPIPSLFWAAGFAFSSADVIKEVLYDQSLRFLFFGEEASMSARLWTHGWDFFAPSEMFIYHLWTRAYRPVFQELESEDTKKSRLESLKSVKAML 606          
BLAST of mRNA_S-dermatodea_contig1269.1649.1 vs. uniprot
Match: A0A0P1AGX0_PLAHL (Procollagen-lysine 5-dioxygenase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AGX0_PLAHL)

HSP 1 Score: 367 bits (942), Expect = 1.980e-114
Identity = 231/570 (40.53%), Postives = 315/570 (55.26%), Query Frame = 1
Query:  145 LSPADLFCLSTAGTAAGSPGFVIKDAFLGRDQALRVYEAALDVEKRGEMKPAGMGRGNDVWHGES-RGDSILWI---TDGIRGTGSFPEALEQLLRSLSALKGPLNGEQGGGCGLSSAGLHLVDTTSVQLARYPGDGQGYVRHRDTPKSAEDSEEDD-------RKITAIYYLNPNWEASMGGQLRVHLDPDNGVRNLDEGGGRTWDVEPLLDRLVLFRSDLVDHEVLPAFSPRLAVTLWFYGRQLGLPSRPSPLPASSFKAESLASQSPKPAKKLDAGDDTRDRVRPLPAPTGGSGGHADEASVFVSVVSYRDSEANPTIVDLLARASNPGRVCVGLVWQLDLDVAEDVAMLRVTPGGDELRGGRVRSLLMPAADAAGPSWARRVAQSLWKGEKYVLQIDSHTRFRPGWDSYLIRTLQSCPSFKPVLTTYPVGYQLPHKIPAGEMRPTLLVPDGFGPEGMLRQTGRLLLRTARDPLPSPLWASGFSFSGSALLLEVPYDPGLRHTFFGEEVSMAARMFTRGWDLFAPPQTVVYHLWSRAHRPSFRQVSTAATQREEARAQRRLRKLLGV 1821
            L+P DLF L        SPGFVIK+ FLG   A+ V +A +++ K  +   A +G G +  + ++ RGD I WI   +D    T S   A+ QL R + AL          G  + S  L L +  S Q + +PGDG  +V+H DT ++ ++ E          R +T +YYLN +W    GG LR HL     +          WDV P LD LVLFRS  V+HEVLP +  R AVT+W+YG+         PL ASS    S     P                RPLP+  G    +  + S+FV++ SYRDSE   TI +L ARA+ P R+  G+  Q D D  E  A L+      +    ++R   M    AAGP  AR  AQ LW+GE++ LQIDSH RFRPGWD +LI  L+ C   KP+LTTYP+GY LP+++ + E RPTLL    F   GMLRQ+ + L R    PL S  WA+GF+FS + ++ EVPYD  LR  FFGEE SMAAR++T GW+ FAP ++VVYHLW+RA+RP F+++    T+R  A + + +++LL +
Sbjct:   58 LNPTDLFTLRHPD----SPGFVIKENFLGYQNAVAVRDALMELTKNEKFCEAKVGTGENSRNDQALRGDKIHWIQTPSDLKTPTESVSPAILQLRRQVEALVY--------GFKIVSPELDLRNVVSTQFSVFPGDGARFVKHVDTYRNTQNDERKAMSKDSLVRLVTCVYYLNDHWLPEDGGYLRFHLKTSPLLSACH------WDVPPKLDTLVLFRSLDVEHEVLPTYRERKAVTIWYYGK---------PLKASSGPTSSECLSIP----------------RPLPSMNGKKFTYEKQPSIFVAIPSYRDSECKHTIENLFARATFPERIYAGICLQTD-DTDETFAYLQ-----SKYSNNKLRIHWMDYRSAAGPCVARSYAQKLWQGEEFYLQIDSHMRFRPGWDCFLINELEKCSLSKPILTTYPLGYTLPNEV-STECRPTLLCASSFDSHGMLRQSSKTLTRVLTKPLSSLFWAAGFAFSSAQVIAEVPYDESLRFLFFGEESSMAARLWTSGWNFFAPSESVVYHLWNRAYRPVFQELECDETKRSRALSLQHVKQLLQI 577          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1269.1649.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNT7_ECTSI1.830e-30270.53Procollagen-lysine 5-dioxygenase n=1 Tax=Ectocarpu... [more]
A0A6H5L271_9PHAE1.350e-29270.48Procollagen-lysine 5-dioxygenase n=1 Tax=Ectocarpu... [more]
A0A835YQS0_9STRA2.440e-15247.14Procollagen-lysine 5-dioxygenase (Fragment) n=1 Ta... [more]
A0A329RXD0_9STRA6.810e-12241.98Procollagen-lysine 5-dioxygenase n=1 Tax=Phytophth... [more]
A0A833TAL9_PHYIN2.540e-12141.75Procollagen-lysine 5-dioxygenase n=1 Tax=Phytophth... [more]
W2QK95_PHYPN1.940e-11739.80Procollagen-lysine 5-dioxygenase n=9 Tax=Phytophth... [more]
A0A7S2SW69_9STRA8.240e-11542.65Procollagen-lysine 5-dioxygenase n=2 Tax=Rhizochro... [more]
A0A485KTR2_9STRA1.070e-11439.12Procollagen-lysine 5-dioxygenase n=1 Tax=Aphanomyc... [more]
A0A8K1FD38_PYTOL1.150e-11439.01Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0P1AGX0_PLAHL1.980e-11440.53Procollagen-lysine 5-dioxygenase n=1 Tax=Plasmopar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1269contigS-dermatodea_contig1269:3169..8048 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score854.7
Seed ortholog evalue2.5e-245
Seed eggNOG ortholog2880.D7FNT7
KEGG koko:K12244
EggNOG free text desc.peptidyl-proline hydroxylation to 4-hydroxy-L-proline
EggNOG OGsKOG3710@1,KOG3710@2759
EC2.4.1.229
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01003
Hectar predicted targeting categoryother localisation
Ec32 ortholog description[Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase, family GT60
Ec32 orthologEc-12_003420.1
Exons9
Model size1824
Cds size1824
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924257.7700858-CDS-S-dermatodea_contig1269:3168..32401622924257.7700858-CDS-S-dermatodea_contig1269:3168..3240Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1269 3169..3240 -
1694079130.4601796-CDS-S-dermatodea_contig1269:3168..32401694079130.4601796-CDS-S-dermatodea_contig1269:3168..3240Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1269 3169..3240 -
1622924257.7795537-CDS-S-dermatodea_contig1269:3441..35941622924257.7795537-CDS-S-dermatodea_contig1269:3441..3594Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1269 3442..3594 -
1694079130.4724677-CDS-S-dermatodea_contig1269:3441..35941694079130.4724677-CDS-S-dermatodea_contig1269:3441..3594Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1269 3442..3594 -
1622924257.7892659-CDS-S-dermatodea_contig1269:3949..42111622924257.7892659-CDS-S-dermatodea_contig1269:3949..4211Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1269 3950..4211 -
1694079130.4820526-CDS-S-dermatodea_contig1269:3949..42111694079130.4820526-CDS-S-dermatodea_contig1269:3949..4211Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1269 3950..4211 -
1622924257.802148-CDS-S-dermatodea_contig1269:4686..50061622924257.802148-CDS-S-dermatodea_contig1269:4686..5006Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1269 4687..5006 -
1694079130.4923604-CDS-S-dermatodea_contig1269:4686..50061694079130.4923604-CDS-S-dermatodea_contig1269:4686..5006Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1269 4687..5006 -
1622924257.8107083-CDS-S-dermatodea_contig1269:5257..54851622924257.8107083-CDS-S-dermatodea_contig1269:5257..5485Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1269 5258..5485 -
1694079130.502207-CDS-S-dermatodea_contig1269:5257..54851694079130.502207-CDS-S-dermatodea_contig1269:5257..5485Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1269 5258..5485 -
1622924257.8190584-CDS-S-dermatodea_contig1269:5971..61511622924257.8190584-CDS-S-dermatodea_contig1269:5971..6151Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1269 5972..6151 -
1694079130.511632-CDS-S-dermatodea_contig1269:5971..61511694079130.511632-CDS-S-dermatodea_contig1269:5971..6151Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1269 5972..6151 -
1622924257.833225-CDS-S-dermatodea_contig1269:6393..66031622924257.833225-CDS-S-dermatodea_contig1269:6393..6603Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1269 6394..6603 -
1694079130.520013-CDS-S-dermatodea_contig1269:6393..66031694079130.520013-CDS-S-dermatodea_contig1269:6393..6603Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1269 6394..6603 -
1622924257.8441763-CDS-S-dermatodea_contig1269:6988..71281622924257.8441763-CDS-S-dermatodea_contig1269:6988..7128Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1269 6989..7128 -
1694079130.5287-CDS-S-dermatodea_contig1269:6988..71281694079130.5287-CDS-S-dermatodea_contig1269:6988..7128Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1269 6989..7128 -
1622924257.8565538-CDS-S-dermatodea_contig1269:7789..80481622924257.8565538-CDS-S-dermatodea_contig1269:7789..8048Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1269 7790..8048 -
1694079130.5377283-CDS-S-dermatodea_contig1269:7789..80481694079130.5377283-CDS-S-dermatodea_contig1269:7789..8048Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1269 7790..8048 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1269.1649.1prot_S-dermatodea_contig1269.1649.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig1269 3169..8048 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig1269.1649.1

>prot_S-dermatodea_contig1269.1649.1 ID=prot_S-dermatodea_contig1269.1649.1|Name=mRNA_S-dermatodea_contig1269.1649.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=608bp
MSLPVKLQAGILSWVGDIPPVPTKYVVPSQAGKDADKESEAAGLLDPCLS
PADLFCLSTAGTAAGSPGFVIKDAFLGRDQALRVYEAALDVEKRGEMKPA
GMGRGNDVWHGESRGDSILWITDGIRGTGSFPEALEQLLRSLSALKGPLN
GEQGGGCGLSSAGLHLVDTTSVQLARYPGDGQGYVRHRDTPKSAEDSEED
DRKITAIYYLNPNWEASMGGQLRVHLDPDNGVRNLDEGGGRTWDVEPLLD
RLVLFRSDLVDHEVLPAFSPRLAVTLWFYGRQLGLPSRPSPLPASSFKAE
SLASQSPKPAKKLDAGDDTRDRVRPLPAPTGGSGGHADEASVFVSVVSYR
DSEANPTIVDLLARASNPGRVCVGLVWQLDLDVAEDVAMLRVTPGGDELR
GGRVRSLLMPAADAAGPSWARRVAQSLWKGEKYVLQIDSHTRFRPGWDSY
LIRTLQSCPSFKPVLTTYPVGYQLPHKIPAGEMRPTLLVPDGFGPEGMLR
QTGRLLLRTARDPLPSPLWASGFSFSGSALLLEVPYDPGLRHTFFGEEVS
MAARMFTRGWDLFAPPQTVVYHLWSRAHRPSFRQVSTAATQREEARAQRR
LRKLLGVG
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mRNA from alignment at S-dermatodea_contig1269:3169..8048-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig1269.1649.1 ID=mRNA_S-dermatodea_contig1269.1649.1|Name=mRNA_S-dermatodea_contig1269.1649.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4880bp|location=Sequence derived from alignment at S-dermatodea_contig1269:3169..8048- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGTCGCTGCCCGTGAAGTTGCAAGCCGGCATTCTATCCTGGGTTGGGGA TATTCCACCTGTACCGACGAAATACGTCGTTCCGTCGCAAGCTGGCAAGG ATGCAGACAAGGAATCAGAGGCGGCCGGATTGTTGGATCCGTGTCTCAGT CCTGCGGATCTCTTCTGTCTGAGCACCGCGGGTACCGCGGCGGGCTCGCC CGGCTTTGTCATCAAGGATGCGTTCCTTGGGCGAGATCAAGCACTTCGGG TGTATGAAGGTGGGCTATACAGAGTGATTTCCGTTTGTTTAGCAAGAGGT GCATAGCACATGTATGTACAGTATGTCAAATGTCTAGGTTTTGACGTTCG GCGAGATAACCACGAGAGAGGGCGGACGGGCATGCATAACAAAAGGCTCT TCAGTCTTGGCACGATCACGACAGAACGCTGCTTATTATGTGGCTCTACA ATGTTACCTTGTTCGGCTCGTTCCCTGCCGAGCCCTGCCGTTCGTCGCAG CGCTTTGCTGAGACGCGAAGCGAGTGAAGACTTGTTGACCTTGCATGTTT TAGCTCTGGGCTGCTGTGGTCTTCAGCACATTCCTACTGGTACATTTTAT AAAAAACAAAATGATCATGTGATACTATAGTTCATGTACATCCCTAATAC TGACTGTAAACTACGACTACAACTGTCAGTATTTCCTATCCAGCATCAAC TTGGCGTGGCTGCACCGAGCACCGTTTTCCTTGGTTTCCCTTCTTCGGCA CAAAGCGAGTCTCACGCTGACTCGAAGCACAAAGACCATGGGGGTAGTCG AGGAACTTATCGAGTCACCCAGTCCCGCTCCCCAGTACCCATGGATCTCC ATATCTCCGTCTCCAGGCGAATGATCGTCGCACGCCCCCATTTTCCCCCG CTCTCGACTGGTCTTCGAAGCCGCTCTTGACGTTGAGAAAAGAGGAGAGA TGAAGCCTGCTGGAATGGGCAGGGGAAACGACGTGTGGCACGGGGAATCG AGAGGCGACAGCATCCTATGGATCACGGATGGCATCCGGGGTACTGGATC GTTCCCGGAGGCAAGTACGCACGCGTTCATGCATGCATAAGGAACCCGCA ACACAAGGCGCGAGGATCGCACCAAATTGATATACAGTACAAGTATTGCT GATGTTCGATGAGACAATCCGGCCGCAGGCGGTGATATAGGAGGGGAGGT GTAAACGAAAAAAAGCGTCCACACCTCCCGCACCCGTTGTGTTATATCGA ATGGAGACATACTTCGGCACAGATACCGCAATCCGTTCATGCAGGCTTGT TTGACGCACTCACACCTTTGCTTGACGGACTCGAAAACACGCGCAGGAAA CGGTGGCAAAGATCCGATTGTACGCACACGTATCATATCATACACCACTT CATTCTGCCCGCTGTCTTTTACGGACGCCCTCGCCCTGCATGCAGGCGCT GGAGCAGCTTCTGCGGAGCCTCTCCGCGTTGAAAGGCCCGCTAAACGGCG AGCAGGGTGGCGGTTGTGGTCTGTCCTCAGCGGGCTTACACCTGGTAGAC ACCACCTCTGTTCAGCTGGCCAGATACCCTGGCGATGGACAGGGTTACGT GCGTCACCGCGATACCCCGAAGAGTGCTGAAGACAGCGAGGAGGACGATC GAAAGGTGCCCTAAGATGCCAGAAAAGGACGCCTTTTACACAACTACTTT ACTTGTATGAAGGCTTCTTGTTTCCCATGGGCAGCCTCTGGACGTCTCGT TGGTTCTCAGTGCCTTATCCGGTGTTGCGTATACCTCGGTCACATCCAGG CTAGGTTACCGCATGGTGCCTGCATTCGCGAGGCTCACACCCGCGCACCC GAGAGCCAACGGTGGGCACTACCTTCGTTGCATATTTCGTGTGACAGATT ACTGCCATTTACTACCTCAACCCTAACTGGGAGGCGTCCATGGGAGGCCA GCTTCGAGTACACTTGGACCCCGACAACGGGGTGCGGAATTTGGATGAAG GGGGCGGCCGTACGTGGGACGTGGAGCCGTTGTTGGACCGGCTCGTGCTA TTCCGCAGCGACCTAGTTGATCACGAGGTGCGTCTGTGCTAAGCTAGTGA TCGGAACGGTGGCAACTGGAGAAGCAGTGAGTCGCTTCTTTGCCTGCACC TTCGGGGCTGCCATGCGATCGGAATGAAGCAAGAAGGGAGATGTTCCGTA CTTGTATGATAGCATCAACCATACGCTTGCGTTGCTCACAGCATGTGGGG GAGACGGTCCGCATACCTTCTCGCATGAAAACGAGCGAGATGACAACTGA TCGCTGCATCACGCCGCAGGTCGAGCCGCGTCGGGCCTCGTTACTGGTGC ACCCTTTCTCGGGGGACGAGTAGGCCCCGTCGACAGTCGGTATGATAGCA CGCGGGGCTTCACGATAAACTTCTGGCCAGACCTCAAGGCTTTTCTCGCA AGCAACTGCCGGCAATTTCGTTGTCTTTTACTTTGTACGACCAGCATCAG ACTTGCACGCAAACGCCCAAGTGCCGTGTCCCCCCTGCCCCCCTCCAATG CTTGTGTGCTTAGGTGTTGCCGGCGTTCTCGCCTCGCCTTGCTGTCACGC TGTGGTTCTACGGCAGACAGCTTGGCCTCCCCTCTAGACCTTCTCCCCTC CCGGCATCGTCCTTTAAGGCCGAATCTTTGGCGTCGCAATCACCAAAACC CGCGAAGAAATTGGACGCAGGAGACGATACGCGTGACAGAGTACGGCCTC TTCCGGCACCCACCGGCGGCAGCGGGGGGCACGCGGACGAGGTAAAGCAT TTAAATCATGGAGTTCCATGCAATTGTTTTGGGCGGGACGCGCGCGGGGC CGGGGGCGGCGAGGCGGGAGAGCTAGACATGTTCGCAACACTCACTCTCC TGCGGGGCGAGTTTTGGACAGGCGATCGCACGCTCCAGGCGGGGTTCTGA GCACGTTATCATACAGCCTACACATCGACACGCTCCTTTCACGACACCCC CCGACCCGCCTCTCGTCCGCCGCTGCCTGCAACGTCCGTCAGGCTTCGGT GTTCGTGAGCGTCGTCAGCTACCGAGACTCAGAGGCCAACCCCACCATCG TCGATCTACTAGCGCGTGCGTCCAACCCTGGTCGAGTTTGCGTCGGCCTG GTGTGGCAGCTAGACCTCGACGTTGCAGAGGACGTGGCAATGCTCCGGGT AACACCAGGGGGCGATGAGTTGCGGGGAGGGCGGGTGCGATCGCTGCTGA TGCCGGCGGCGGATGCTGCCGGGCCGTCGTGGGCTAGGCGCGTTGCGCAG TCTCTGTGGAAGGGGGAAAAGTACGTGTTGCAGATCGACAGCCACACGCG CTTCAGGCCTGGGTGAGTCTTCGGGGCATGCCAATGTTGCTGTCTGCTAT CGACGCAGCTCCTAGCGATGTTGAGATGGGTGTGTTGATGTTTTTTTGTT TATTCGTTGATTGCTTTATTGATTTTCAGCTGATCGGTAAAGTTAGACCC GACTTGCCGTCAGACGCGGAAGGAATGAAGCCCTCGTGGAATAGCCATCG TGGTATTCCTCAACCAAGTGTCAGAGAATGATACCGAGGGTAGGTTCGAT ACGGCCGCCGGTTGTTTCTACCTTACTGAATCTGAGAATTTGACCTCCAA AACCTGCATAGTATATTATGATCTAGACGTGGACTGCTAGTCCTACCGGT GAAGGTTGAGGCAAGTGAGGGCCGCCACCCTGCCACCCTACCACTAGCTA AACACACGTCCCAGTTTTGTCAAATCATATGAATATAAAAACAAACACCT ACCCGGCACCCGAATCACCCCCTCGCCTCCATCGCAGCTGGGACTCGTAC CTCATCCGCACGCTGCAGAGCTGCCCCTCCTTCAAGCCCGTCCTCACCAC ATACCCCGTAGGCTACCAGCTCCCCCACAAAATCCCGGCGGGGGAGATGA GACCGACACTGCTGGTTCCGGACGGATTTGGGCCGGAAGGGATGCTGCGC CAGACTGGGAGATTGTTGCTGCGGACGGCGCGGGACCCGCTGCCTTCTCC GCTGTGGGCCTCGGGGTTCAGCTTCAGCGGCAGCGCATTGCTGCTCGAGG TGCGCTGCAGGGTTTGTCACGCGTCGCTGGATTGTCGGCCGGGCGAGCGC CGTGTGTTATGAGTGGTTCGTTACGGCAACCTGTGGTTGTTTGTTTTTGT AGAACGACACCTACAAACGAGGCACTCGTGGTGTTGTTGGTCCATCCCTT TTTTTAAGGCGCACGTGGCCGAGGCGAACAGTTCACCGTAAGGTGGTTAG ATTGAGCCCCCGGCTCTTTTTCGTCATGCTAAACTTGGTTCCTTGATACA ACAGCACGCGTGACACCGCGCGGTAGCGATAGTATATAATTTTCCCACTC ATCTTGACGCCTCCTCTGCGGCCATGACACCTCGCACTTCCCATCCTCGT TAAGGTGCCCTACGATCCGGGCCTGAGGCATACCTTCTTCGGAGAAGAGG TTTCCATGGCGGCGCGCATGTTCACTAGAGGGTGGGACTTATTCGCCCCG CCGCAGACCGTGGTGTACCACCTGTGGAGCAGGGCGCATCGTCCCAGCTT TCGGCAGGTATGATACAGCGCGATACACTGCTGACGCTCGTTTCCACGCA CGCGTACAGAAGGGTGCGCCTCTATATTGCCAGAGGCGCTGAGCGCTGAA GTGTAAGTTACGGGGCAAGACGCCGCCTAAACCTTTGTCGCTTCAACAAG ATATCCTACCCACTGAGTGTCCTGCGAAAAACCACAATTGATCACAACTT ATATTTAGGTGTCCACGGCGGCAACGCAACGAGAGGAAGCGCGTGCACAA CGGCGACTCCGTAAGCTGCTTGGTGTCGGC
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Coding sequence (CDS) from alignment at S-dermatodea_contig1269:3169..8048-

>mRNA_S-dermatodea_contig1269.1649.1 ID=mRNA_S-dermatodea_contig1269.1649.1|Name=mRNA_S-dermatodea_contig1269.1649.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3648bp|location=Sequence derived from alignment at S-dermatodea_contig1269:3169..8048- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGTCGCTGCCCGTGAAGTTGCAAGCCGGCATTCTATCCTGGGTTGGGGA
TATTCCACCTGTACCGACGAAATACGTCGTTCCGTCGCAAGCTGGCAAGG
ATGCAGACAAGGAATCAGAGGCGGCCGGATTGTTGGATCCGTGTCTCAGT
CCTGCGGATCTCTTCTGTCTGAGCACCGCGGGTACCGCGGCGGGCTCGCC
CGGCTTTGTCATCAAGGATGCGTTCCTTGGGCGAGATCAAGCACTTCGGG
TGTATGAAGATGTCGCTGCCCGTGAAGTTGCAAGCCGGCATTCTATCCTG
GGTTGGGGATATTCCACCTGTACCGACGAAATACGTCGTTCCGTCGCAAG
CTGGCAAGGATGCAGACAAGGAATCAGAGGCGGCCGGATTGTTGGATCCG
TGTCTCAGTCCTGCGGATCTCTTCTGTCTGAGCACCGCGGGTACCGCGGC
GGGCTCGCCCGGCTTTGTCATCAAGGATGCGTTCCTTGGGCGAGATCAAG
CACTTCGGGTGTATGAAGCCGCTCTTGACGTTGAGAAAAGAGGAGAGATG
AAGCCTGCTGGAATGGGCAGGGGAAACGACGTGTGGCACGGGGAATCGAG
AGGCGACAGCATCCTATGGATCACGGATGGCATCCGGGGTACTGGATCGT
TCCCGGAGCCGCTCTTGACGTTGAGAAAAGAGGAGAGATGAAGCCTGCTG
GAATGGGCAGGGGAAACGACGTGTGGCACGGGGAATCGAGAGGCGACAGC
ATCCTATGGATCACGGATGGCATCCGGGGTACTGGATCGTTCCCGGAGGC
GCTGGAGCAGCTTCTGCGGAGCCTCTCCGCGTTGAAAGGCCCGCTAAACG
GCGAGCAGGGTGGCGGTTGTGGTCTGTCCTCAGCGGGCTTACACCTGGTA
GACACCACCTCTGTTCAGCTGGCCAGATACCCTGGCGATGGACAGGGTTA
CGTGCGTCACCGCGATACCCCGAAGAGTGCTGAAGACAGCGAGGAGGACG
ATCGAAAGGCGCTGGAGCAGCTTCTGCGGAGCCTCTCCGCGTTGAAAGGC
CCGCTAAACGGCGAGCAGGGTGGCGGTTGTGGTCTGTCCTCAGCGGGCTT
ACACCTGGTAGACACCACCTCTGTTCAGCTGGCCAGATACCCTGGCGATG
GACAGGGTTACGTGCGTCACCGCGATACCCCGAAGAGTGCTGAAGACAGC
GAGGAGGACGATCGAAAGATTACTGCCATTTACTACCTCAACCCTAACTG
GGAGGCGTCCATGGGAGGCCAGCTTCGAGTACACTTGGACCCCGACAACG
GGGTGCGGAATTTGGATGAAGGGGGCGGCCGTACGTGGGACGTGGAGCCG
TTGTTGGACCGGCTCGTGCTATTCCGCAGCGACCTAGTTGATCACGAGAT
TACTGCCATTTACTACCTCAACCCTAACTGGGAGGCGTCCATGGGAGGCC
AGCTTCGAGTACACTTGGACCCCGACAACGGGGTGCGGAATTTGGATGAA
GGGGGCGGCCGTACGTGGGACGTGGAGCCGTTGTTGGACCGGCTCGTGCT
ATTCCGCAGCGACCTAGTTGATCACGAGGTGTTGCCGGCGTTCTCGCCTC
GCCTTGCTGTCACGCTGTGGTTCTACGGCAGACAGCTTGGCCTCCCCTCT
AGACCTTCTCCCCTCCCGGCATCGTCCTTTAAGGCCGAATCTTTGGCGTC
GCAATCACCAAAACCCGCGAAGAAATTGGACGCAGGAGACGATACGCGTG
ACAGAGTACGGCCTCTTCCGGCACCCACCGGCGGCAGCGGGGGGCACGCG
GACGAGGTGTTGCCGGCGTTCTCGCCTCGCCTTGCTGTCACGCTGTGGTT
CTACGGCAGACAGCTTGGCCTCCCCTCTAGACCTTCTCCCCTCCCGGCAT
CGTCCTTTAAGGCCGAATCTTTGGCGTCGCAATCACCAAAACCCGCGAAG
AAATTGGACGCAGGAGACGATACGCGTGACAGAGTACGGCCTCTTCCGGC
ACCCACCGGCGGCAGCGGGGGGCACGCGGACGAGGCTTCGGTGTTCGTGA
GCGTCGTCAGCTACCGAGACTCAGAGGCCAACCCCACCATCGTCGATCTA
CTAGCGCGTGCGTCCAACCCTGGTCGAGTTTGCGTCGGCCTGGTGTGGCA
GCTAGACCTCGACGTTGCAGAGGACGTGGCAATGCTCCGGGTAACACCAG
GGGGCGATGAGTTGCGGGGAGGGCGGGTGCGATCGCTGCTGATGCCGGCG
GCGGATGCTGCCGGGCCGTCGTGGGCTAGGCGCGTTGCGCAGTCTCTGTG
GAAGGGGGAAAAGTACGTGTTGCAGATCGACAGCCACACGCGCTTCAGGC
CTGGGCTTCGGTGTTCGTGAGCGTCGTCAGCTACCGAGACTCAGAGGCCA
ACCCCACCATCGTCGATCTACTAGCGCGTGCGTCCAACCCTGGTCGAGTT
TGCGTCGGCCTGGTGTGGCAGCTAGACCTCGACGTTGCAGAGGACGTGGC
AATGCTCCGGGTAACACCAGGGGGCGATGAGTTGCGGGGAGGGCGGGTGC
GATCGCTGCTGATGCCGGCGGCGGATGCTGCCGGGCCGTCGTGGGCTAGG
CGCGTTGCGCAGTCTCTGTGGAAGGGGGAAAAGTACGTGTTGCAGATCGA
CAGCCACACGCGCTTCAGGCCTGGCTGGGACTCGTACCTCATCCGCACGC
TGCAGAGCTGCCCCTCCTTCAAGCCCGTCCTCACCACATACCCCGTAGGC
TACCAGCTCCCCCACAAAATCCCGGCGGGGGAGATGAGACCGACACTGCT
GGTTCCGGACGGATTTGGGCCGGAAGGGATGCTGCGCCAGACTGGGAGAT
TGTTGCTGCGGACGGCGCGGGACCCGCTGCCTTCTCCGCTGTGGGCCTCG
GGGTTCAGCTTCAGCGGCAGCGCATTGCTGCTCGAGCTGGGACTCGTACC
TCATCCGCACGCTGCAGAGCTGCCCCTCCTTCAAGCCCGTCCTCACCACA
TACCCCGTAGGCTACCAGCTCCCCCACAAAATCCCGGCGGGGGAGATGAG
ACCGACACTGCTGGTTCCGGACGGATTTGGGCCGGAAGGGATGCTGCGCC
AGACTGGGAGATTGTTGCTGCGGACGGCGCGGGACCCGCTGCCTTCTCCG
CTGTGGGCCTCGGGGTTCAGCTTCAGCGGCAGCGCATTGCTGCTCGAGGT
GCCCTACGATCCGGGCCTGAGGCATACCTTCTTCGGAGAAGAGGTTTCCA
TGGCGGCGCGCATGTTCACTAGAGGGTGGGACTTATTCGCCCCGCCGCAG
ACCGTGGTGTACCACCTGTGGAGCAGGGCGCATCGTCCCAGCTTTCGGCA
GGTGCCCTACGATCCGGGCCTGAGGCATACCTTCTTCGGAGAAGAGGTTT
CCATGGCGGCGCGCATGTTCACTAGAGGGTGGGACTTATTCGCCCCGCCG
CAGACCGTGGTGTACCACCTGTGGAGCAGGGCGCATCGTCCCAGCTTTCG
GCAGGTGTCCACGGCGGCAACGCAACGAGAGGAAGCGCGTGCACAACGGC
GACTCCGTAAGCTGCTTGGTGTCGGCGTGTCCACGGCGGCAACGCAACGA
GAGGAAGCGCGTGCACAACGGCGACTCCGTAAGCTGCTTGGTGTCGGC
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