mRNA_S-dermatodea_contig1268.1646.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig1268.1646.1
Unique NamemRNA_S-dermatodea_contig1268.1646.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig1268.1646.1 vs. uniprot
Match: D7FSQ2_ECTSI (RNA_pol_Rbc25 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSQ2_ECTSI)

HSP 1 Score: 327 bits (838), Expect = 1.300e-109
Identity = 213/288 (73.96%), Postives = 226/288 (78.47%), Query Frame = 1 
Query:   40 MFVLATIKDTVK-----------------VAPGKFSADALSVLTAQIEAKFADRVIADVGLCLCLHSYESIGDPYVYPSDGSAHYKASRFLRFSFVRFRMLVFRPFVGEILAGRVSSCTKLGVKVSLEFFENATIPKDLLQAPSVFTRGEWIWSYPXXXXXXXXXXXXXXXXXXXXXX--SEDVPFALALHDEVRFRVRTLEFTQVTSTATGSLQATTVSTARGSGGAAGAVGRGXXAA----GGAEPPTVRERGTSIDLTSAEEAPSAMMITGSMNEEGLGLLSWWE 834
            MFVLATIKDTVK                 VAP KFS DAL VLTAQIEAKFADRVIA+VGLC+CLHSYESIGDPYVYPSDG+AHYK         VRFRMLVFRPFVGEIL G+VSSCTK G+KVSL+FFENA+IPKDLLQ+PSVF RGEW+WS  XXXXXXXXXXXXXXXXXXXXXX    D  F+L LHDEVRFRVRTLEFTQVTSTATGSLQATTVSTARG+ G        XX       G +PP VRERGTS+DLT  EEAPSAM ITGSMNEEGLGLLSWWE
Sbjct:    1 MFVLATIKDTVKSPELVPGDCCLLRMTIWVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCICLHSYESIGDPYVYPSDGAAHYK---------VRFRMLVFRPFVGEILTGKVSSCTKQGIKVSLDFFENASIPKDLLQSPSVFARGEWMWSXXXXXXXXXXXXXXXXXXXXXXXXXXENDDSFSLTLHDEVRFRVRTLEFTQVTSTATGSLQATTVSTARGAAGXXXXXXXXXXXXXXXXNGGQPPVVRERGTSVDLTDVEEAPSAMTITGSMNEEGLGLLSWWE 279
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BLAST of mRNA_S-dermatodea_contig1268.1646.1 vs. uniprot
Match: A0A835YK61_9STRA (RNA polymerase III subunit Rpc25-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK61_9STRA)

HSP 1 Score: 212 bits (539), Expect = 8.440e-65
Identity = 126/268 (47.01%), Postives = 167/268 (62.31%), Query Frame = 1 
Query:   40 MFVLATIKDTVKVAPGKFSADALSVLTAQIEAKFADRVIADVGLCLCLHSYESIGDPYVYPSDGSAHYKASRFLRFSFVRFRMLVFRPFVGEILAGRVSSCTKLGVKVSLEFFENATIPKDLLQAPSVFTRGE--WIWSYPXXXXXXXXXXXXXXXXXXXXXXSEDVPFALALHDEVRFRVRTLEFTQVTSTATGSLQATTVSTA-RGSGGAAGAVGRGXXAAGGAE-PPTVRERGTSIDLTSAEEAPSAMMITGSMNEEGLGLLSWW 831
            MFVLAT++D +KV P  F    L VLT  ++ K++++VI +VGL +CLHS+ES+GD  VYPSDGSAHY+A          FR+L+FRPFVGE+L G++  C++ G+ VS+ FFE+ TIPK LL  PSV+ +    W+W Y                       + D  + + + DE+RFRVRTL+FT+V +TA G  QATTVST  +G GG        X A G  E PP  R+R TSID+T+  EAP  M IT S+NE+GLGL SWW
Sbjct:    1 MFVLATVRDNLKVIPESFDRPTLDVLTEVVDMKYSNKVIINVGLAICLHSFESVGDALVYPSDGSAHYEAE---------FRLLMFRPFVGEVLTGKIGRCSETGITVSIGFFEDITIPKPLLCHPSVYHKRHKAWVWKY-------------SDADADAADFNPDDSYIMQVGDEIRFRVRTLDFTEVVNTANG-YQATTVSTGPQGGGGXXXXXXXXXRAKGLQEAPPMGRQRSTSIDITTPAEAPPCMSITASINEDGLGLTSWW 245
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BLAST of mRNA_S-dermatodea_contig1268.1646.1 vs. uniprot
Match: A0A067CHA1_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CHA1_SAPPC)

HSP 1 Score: 179 bits (454), Expect = 2.500e-52
Identity = 103/266 (38.72%), Postives = 151/266 (56.77%), Query Frame = 1 
Query:   40 MFVLATIKDTVKVAPGKFSADALSVLTAQIEAKFADRVIADVGLCLCLHSYESIGDPYVYPSDGSAHYKASRFLRFSFVRFRMLVFRPFVGEILAGRVSSCTKLGVKVSLEFFENATIPKDLLQAPSVFTRGE--WIWSYPXXXXXXXXXXXXXXXXXXXXXXSEDVPFALALHDEVRFRVRTLEFTQVTSTATGSLQATTVSTARGSGGAAGAVGRGXXAAGGAEPPTVRERGTSIDLTSAEEAPSAMMITGSMNEEGLGLLSWW 831
            MFVL  I D +++AP  F  D  SVLT +I+ K+A++VIADVGLC+ L+ +  IGD Y++PSDG++H +         V FRM+VF+PF+GE+L G++ SCT+  ++VS++F ++  IP   +Q PS F + E  W W +P                       E  P+ + LH+EVRFRV  + FT+VT TA G +QAT    A                    +  + R R +S+DL+  +  PSAM I G+++E+GLGL SWW
Sbjct:    1 MFVLCRIADVIQIAPELFGTDYSSVLTEEIDRKYANKVIADVGLCITLYDFIEIGDAYIHPSDGTSHTE---------VVFRMVVFQPFIGEVLKGKIISCTEEHIRVSMDFVQDIIIPSYAMQTPSFFDKNERLWEWKFPGKE-------------------DEQDPYYMYLHEEVRFRVTNINFTRVTKTAKG-IQATVTEAA--------------------DSASSRRRSSSVDLSEHDPKPSAMQIIGTIDEDGLGLSSWW 217
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BLAST of mRNA_S-dermatodea_contig1268.1646.1 vs. uniprot
Match: A0A7S3H250_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H250_9STRA)

HSP 1 Score: 171 bits (434), Expect = 2.620e-49
Identity = 112/259 (43.24%), Postives = 149/259 (57.53%), Query Frame = 1 
Query:   61 KDTVKVAPGKFSADALSVLTAQIEAKFADRVIADVGLCLCLHSYESIGDPYVYPSDGSAHYKASRFLRFSFVRFRMLVFRPFVGEILAGRVSSCTKLGVKVSLEFFENATIPKDLLQAPSVFTR--GEWIWSYPXXXXXXXXXXXXXXXXXXXXXXSEDVPFALALHDEVRFRVRTLEFTQVTSTATGSLQATTVSTARGSGGAAGAVGRGXXAAGGAEPPTVRERGTSIDLTSAEEAPSAMMITGSMNEEGLGLLSWW 831
            +D +K AP +F  DA  VL  QIE K+A+RV+  VGLC+  + + SIGDPY+YPS+GSA            VRFRM+VFRPFVGEI+ GR+ S  + G+K+S EFFE+  IP  LLQAP V+    G W W Y                         +  F + + +EVRF+VRTL FTQ++S+  G L ATT S    +G  AG     XX   G   P +R R +S+ L+  +E P+ M I G+MN+ GLGL+SWW
Sbjct:    1 EDKIKTAPDQFGRDAAEVLKEQIEIKYANRVLLHVGLCITFYDFISIGDPYLYPSEGSA---------IQIVRFRMVVFRPFVGEIITGRLVSSGREGLKISTEFFEDILIPAALLQAPCVYNPVDGLWTWKY----------------------GEPENDFLMDIGEEVRFKVRTLTFTQLSSSVKG-LTATTTSE---TGNDAGXXXXXXXXXPG---PALRRRSSSMGLSPDDEIPAVMQIIGAMNDFGLGLISWW 221
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BLAST of mRNA_S-dermatodea_contig1268.1646.1 vs. uniprot
Match: K3WAI2_GLOUD (Uncharacterized protein n=21 Tax=Oomycota TaxID=4762 RepID=K3WAI2_GLOUD)

HSP 1 Score: 171 bits (433), Expect = 3.810e-49
Identity = 104/266 (39.10%), Postives = 147/266 (55.26%), Query Frame = 1 
Query:   40 MFVLATIKDTVKVAPGKFSADALSVLTAQIEAKFADRVIADVGLCLCLHSYESIGDPYVYPSDGSAHYKASRFLRFSFVRFRMLVFRPFVGEILAGRVSSCTKLGVKVSLEFFENATIPKDLLQAPSVFTRGE--WIWSYPXXXXXXXXXXXXXXXXXXXXXXSEDVPFALALHDEVRFRVRTLEFTQVTSTATGSLQATTVSTARGSGGAAGAVGRGXXAAGGAEPPTVRERGTSIDLTSAEEAPSAMMITGSMNEEGLGLLSWW 831
            MFVL  + D + V P  F AD   VL  +I+ K+A++VIADVGLC+ ++ +  IGD +V+PSDG++H         S V FRM+VFRPFVGE+L GR+ SCT+  ++VS++F ++  IP   LQ PS F   E  W+W Y                            F + +H+E+RFRV  + FT+VT TA G +QATT   +        A   G   A        R R +S+DL+  +  PSA+ I G+++E+GLGL SWW
Sbjct:    1 MFVLTRLSDVIPVNPELFDADYTKVLVEEIDRKYANKVIADVGLCITIYDFVHIGDAFVHPSDGTSH---------SQVEFRMVVFRPFVGEVLKGRIVSCTEEHIRVSMDFVQDIIIPSYALQTPSYFDTAERLWVWKY----------------------SEGQEKFYMDMHEEIRFRVTNINFTRVTKTANG-IQATTTEASDK------AASEGQSLA--------RRRSSSVDLSDNDPTPSAIHILGTIDEDGLGLSSWW 220
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BLAST of mRNA_S-dermatodea_contig1268.1646.1 vs. uniprot
Match: A0A8K1CBB5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBB5_PYTOL)

HSP 1 Score: 171 bits (432), Expect = 6.430e-49
Identity = 105/266 (39.47%), Postives = 148/266 (55.64%), Query Frame = 1 
Query:   40 MFVLATIKDTVKVAPGKFSADALSVLTAQIEAKFADRVIADVGLCLCLHSYESIGDPYVYPSDGSAHYKASRFLRFSFVRFRMLVFRPFVGEILAGRVSSCTKLGVKVSLEFFENATIPKDLLQAPSVFTRGE--WIWSYPXXXXXXXXXXXXXXXXXXXXXXSEDVPFALALHDEVRFRVRTLEFTQVTSTATGSLQATTVSTARGSGGAAGAVGRGXXAAGGAEPPTVRERGTSIDLTSAEEAPSAMMITGSMNEEGLGLLSWW 831
            MFVL  I D + VAP  F  D   VL  +I+ K+A++VIADVGLC+ ++ +  IGD +V+PSDG++H         S V FRM+VFRPFVGE+L GR+ SC +  ++VS++F ++  IP   +Q PS F   E  W+W Y                            F + LH+E+RFRV ++ FT+VT TA G +QATT   +  +  AA         AG       R R  S+DL+  +  PSA+ I G+++E+GLGL SWW
Sbjct:    1 MFVLTRISDVIPVAPDLFEEDYQKVLVEEIDRKYANKVIADVGLCISIYDFVHIGDAFVHPSDGTSH---------SQVEFRMVVFRPFVGEVLKGRIVSCNEEHIRVSMDFVQDIIIPSYAMQTPSYFDTTERLWVWKY----------------------SEGQEKFFMDLHEEIRFRVTSINFTRVTKTAHG-IQATTTEASDKTTDAA-------PNAGDMRQSLARGRSASVDLSDTDPTPSAIHILGTIDEDGLGLSSWW 227
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BLAST of mRNA_S-dermatodea_contig1268.1646.1 vs. uniprot
Match: A0A024URS8_9STRA (DNA-directed RNA polymerase n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024URS8_9STRA)

HSP 1 Score: 168 bits (425), Expect = 6.610e-48
Identity = 101/266 (37.97%), Postives = 150/266 (56.39%), Query Frame = 1 
Query:   40 MFVLATIKDTVKVAPGKFSADALSVLTAQIEAKFADRVIADVGLCLCLHSYESIGDPYVYPSDGSAHYKASRFLRFSFVRFRMLVFRPFVGEILAGRVSSCTKLGVKVSLEFFENATIPKDLLQAPSVFTRGE--WIWSYPXXXXXXXXXXXXXXXXXXXXXXSEDVPFALALHDEVRFRVRTLEFTQVTSTATGSLQATTVSTARGSGGAAGAVGRGXXAAGGAEPPTVRERGTSIDLTSAEEAPSAMMITGSMNEEGLGLLSWW 831
            MFVL  + D ++VAP  FSAD  SVL  +I+ K+A++VIADVGLC+  + +  IGD YV+PSDG++H         + V FRM+VFRPF+GEIL G++ +CT+  ++VS+EF ++  IP   +Q PS F + E  W W +P                       +  P+ + L++EVRFRV  + FT+V  TA G    T  +  +                  +E PT R R +S+DL+  +  P+A+ I G+++E+GLGL SWW
Sbjct:    1 MFVLCRVADVIQVAPELFSADYSSVLIEEIDRKYANKVIADVGLCITHYDFIEIGDAYVHPSDGTSH---------TDVIFRMVVFRPFIGEILKGKIINCTEEHIRVSMEFMQDIIIPSYAMQNPSFFDKTERLWEWKFPGRE-------------------DDQDPYYMYLNEEVRFRVTNINFTRVLKTANGMQAVTEAADTKPDK---------------SENPT-RRRSSSVDLSDTDPKPAALQIIGTIDEDGLGLSSWW 222
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BLAST of mRNA_S-dermatodea_contig1268.1646.1 vs. uniprot
Match: A0A6G0XPV7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPV7_9STRA)

HSP 1 Score: 167 bits (424), Expect = 9.340e-48
Identity = 104/270 (38.52%), Postives = 152/270 (56.30%), Query Frame = 1 
Query:   40 MFVLATIKDTVKVAPGKFSADALSVLTAQIEAKFADRVIADVGLCLCLHSYESIGDPYVYPSDGSAHYKASRFLRFSFVRFRMLVFRPFVGEILAGRVSSCTKLGVKVSLEFFENATIPKDLLQAPSVFTRGE--WIWSYPXXXXXXXXXXXXXXXXXXXXXXSEDVPFALALHDEVRFRVRTLEFTQVTSTATGSLQAT----TVSTARGSGGAAGAVGRGXXAAGGAEPPTVRERGTSIDLTSAEEAPSAMMITGSMNEEGLGLLSWW 831
            MFVL  I D ++VAP  F+AD  SVL  +I+ K+A++VIADVGLC+  + +  IGD Y++PSDG++H +         V FRM+VFRPF+GEIL G++ SCT+  ++VS++F ++  IP   +Q PS F + E  W W +P                       +D P+ + L++E+RFRV  + FT+V  TATG    T    T+   R                   E PT R R +S+DL+  +  PSA+ I G+++E+GLGL SWW
Sbjct:    1 MFVLCRIADVIQVAPEFFAADYSSVLIEEIDRKYANKVIADVGLCITHYDFIEIGDAYIHPSDGTSHTE---------VIFRMVVFRPFIGEILKGKIISCTEEHIRVSMDFVQDIIIPSYAMQNPSFFDKTERLWEWKFPGREE------------------GQD-PYYMYLNEEIRFRVTNINFTRVLKTATGIQAVTETADTIPDKR-------------------ENPT-RRRSSSVDLSETDPKPSALQIVGTIDEDGLGLSSWW 222
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BLAST of mRNA_S-dermatodea_contig1268.1646.1 vs. uniprot
Match: A0A6V1SWR7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SWR7_HETAK)

HSP 1 Score: 166 bits (419), Expect = 1.780e-47
Identity = 99/207 (47.83%), Postives = 126/207 (60.87%), Query Frame = 1 
Query:   40 MFVLATIKDTVKVAPGKFSADALSVLTAQIEAKFADRVIADVGLCLCLHSYESIGDPYVYPSDGSAHYKASRFLRFSFVRFRMLVFRPFVGEILAGRVSSCTKLGVKVSLEFFENATIPKDLLQAPSVFTRGE--WIWSYPXXXXXXXXXXXXXXXXXXXXXXSEDVPFALALHDEVRFRVRTLEFTQVTSTATGSLQATTVSTARG 654
            MFVLA +KD+VK+ P  F  + +  LT +I+ K+A++VI DVGLC+CL  +E IGD Y+YP DGSAHYKA+         FR+LVFRPFVGEI+ GR+SS +K G+KVSL F ++  +P  LLQAPS F   E  W W Y                        E     + + D  RFRVRTL+FTQV +TA G LQA TVST+ G
Sbjct:    1 MFVLAVVKDSVKIHPSAFDKNQIQALTEEIDHKYANKVILDVGLCICLFDFEHIGDAYIYPLDGSAHYKAT---------FRLLVFRPFVGEIITGRISSQSKEGIKVSLGFTDDIIVPSYLLQAPSQFDPEERAWTWKY-------------------QDEDGEAQDMLMEVGDACRFRVRTLDFTQVKATAKG-LQAHTVSTSVG 178
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BLAST of mRNA_S-dermatodea_contig1268.1646.1 vs. uniprot
Match: A0A7S2SVH5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVH5_9STRA)

HSP 1 Score: 164 bits (416), Expect = 1.870e-46
Identity = 103/272 (37.87%), Postives = 152/272 (55.88%), Query Frame = 1 
Query:   40 MFVLATIKDTVKVAPGKFSADALSVLTAQIEAKFADRVIADVGLCLCLHSYESIGDPYVYPSDGSAHYKASRFLRFSFVRFRMLVFRPFVGEILAGRVSSCTKLGVKVSLEFFENATIPKDLLQAPSVF-TRGE-WIWSYPXXXXXXXXXXXXXXXXXXXXXXSEDVPFALALHDEVRFRVRTLEFTQVTSTATGSLQATTVSTARGS--GGAAGAVGRGXXAAGGAEPPT---VRERGTSIDLTSAEEA--PSAMMITGSMNEEGLGLLSW 828
            MFVL+ ++D V+VAP KF  D + VL+ +++ K+A++VI ++GLC+C H ++SI +  VYPSDG AH+          V FR++VFRPFVGE+  G +   T  G+ VSL+FFE+  IPK LL  PS +  R + W+W Y                                + ++VRF+V  +++T+++ TA G +  TT    RG+  GG  G++           PP    VR+R TS+DLT  EE   P AMMI GS+ + GLGL++W
Sbjct:    1 MFVLSVLRDVVRVAPDKFDRDLVEVLSEELDKKYANKVIPNIGLCICTHDFKSIEEAKVYPSDGGAHHS---------VVFRLIVFRPFVGEVAVGTIVRSTSQGIHVSLDFFEDVFIPKHLLPQPSEYDARAKLWVWKYEGSGDGG----------------------VFHVDEQVRFQVERVDYTELSDTARGVVATTTTVEHRGASAGGGQGSI-----------PPAQPFVRQRSTSVDLTDGEEQEEPPAMMIIGSVQDHGLGLVTW 230
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1268.1646.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSQ2_ECTSI1.300e-10973.96RNA_pol_Rbc25 domain-containing protein n=1 Tax=Ec... [more]
A0A835YK61_9STRA8.440e-6547.01RNA polymerase III subunit Rpc25-domain-containing... [more]
A0A067CHA1_SAPPC2.500e-5238.72Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
A0A7S3H250_9STRA2.620e-4943.24Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
K3WAI2_GLOUD3.810e-4939.10Uncharacterized protein n=21 Tax=Oomycota TaxID=47... [more]
A0A8K1CBB5_PYTOL6.430e-4939.47Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024URS8_9STRA6.610e-4837.97DNA-directed RNA polymerase n=4 Tax=Aphanomyces Ta... [more]
A0A6G0XPV7_9STRA9.340e-4838.52Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6V1SWR7_HETAK1.780e-4747.83Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2SVH5_9STRA1.870e-4637.87Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1268contigS-dermatodea_contig1268:11042..20207 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score330.1
Seed ortholog evalue1e-87
Seed eggNOG ortholog2880.D7FSQ2
Preferred namePOLR3H
KEGG rclassRC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01715,RC01734,RC02273,RC02795
KEGG koko:K00121,ko:K03022
KEGG ReactionR00435,R00441,R00442,R00443,R00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R06983,R07105,R08281,R08306,R08310
KEGG Pathwayko00010,ko00071,ko00230,ko00240,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko03020,ko04623,ko05169,ko05204,map00010,map00071,map00230,map00240,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map03020,map04623,map05169,map05204
KEGG ModuleM00181
GOsGO:0000228,GO:0000428,GO:0000785,GO:0000790,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005666,GO:0005694,GO:0006139,GO:0006351,GO:0006352,GO:0006383,GO:0006384,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009304,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0042797,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0046483,GO:0055029,GO:0061695,GO:0070013,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234
EggNOG free text desc.transcription initiation from RNA polymerase III promoter
EggNOG OGsCOG1095@1,KOG3297@2759
EC1.1.1.1,1.1.1.284
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko01000,ko03021
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionRNA polymerase Rpb7, N-terminal
Ec32 orthologEc-03_002970.1
Exons7
Model size838
Cds size837
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924257.5617337-CDS-S-dermatodea_contig1268:11041..111161622924257.5617337-CDS-S-dermatodea_contig1268:11041..11116Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1268 11042..11116 +
1694079130.3427372-CDS-S-dermatodea_contig1268:11041..111161694079130.3427372-CDS-S-dermatodea_contig1268:11041..11116Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1268 11042..11116 +
1622924257.5811348-CDS-S-dermatodea_contig1268:11825..120231622924257.5811348-CDS-S-dermatodea_contig1268:11825..12023Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1268 11826..12023 +
1694079130.3558493-CDS-S-dermatodea_contig1268:11825..120231694079130.3558493-CDS-S-dermatodea_contig1268:11825..12023Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1268 11826..12023 +
1622924257.594342-CDS-S-dermatodea_contig1268:12652..127391622924257.594342-CDS-S-dermatodea_contig1268:12652..12739Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1268 12653..12739 +
1694079130.3642797-CDS-S-dermatodea_contig1268:12652..127391694079130.3642797-CDS-S-dermatodea_contig1268:12652..12739Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1268 12653..12739 +
1622924257.6064317-CDS-S-dermatodea_contig1268:13055..131201622924257.6064317-CDS-S-dermatodea_contig1268:13055..13120Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1268 13056..13120 +
1694079130.3727288-CDS-S-dermatodea_contig1268:13055..131201694079130.3727288-CDS-S-dermatodea_contig1268:13055..13120Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1268 13056..13120 +
1622924257.6167233-CDS-S-dermatodea_contig1268:14291..144631622924257.6167233-CDS-S-dermatodea_contig1268:14291..14463Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1268 14292..14463 +
1694079130.3805938-CDS-S-dermatodea_contig1268:14291..144631694079130.3805938-CDS-S-dermatodea_contig1268:14291..14463Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1268 14292..14463 +
1622924257.6247334-CDS-S-dermatodea_contig1268:17849..179771622924257.6247334-CDS-S-dermatodea_contig1268:17849..17977Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1268 17850..17977 +
1694079130.3886101-CDS-S-dermatodea_contig1268:17849..179771694079130.3886101-CDS-S-dermatodea_contig1268:17849..17977Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1268 17850..17977 +
1622924257.6333575-CDS-S-dermatodea_contig1268:20095..202071622924257.6333575-CDS-S-dermatodea_contig1268:20095..20207Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1268 20096..20207 +
1694079130.3969743-CDS-S-dermatodea_contig1268:20095..202071694079130.3969743-CDS-S-dermatodea_contig1268:20095..20207Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1268 20096..20207 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1268.1646.1prot_S-dermatodea_contig1268.1646.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig1268 11042..20207 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig1268.1646.1

>prot_S-dermatodea_contig1268.1646.1 ID=prot_S-dermatodea_contig1268.1646.1|Name=mRNA_S-dermatodea_contig1268.1646.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=279bp
FELCFFIQAQCLAMFVLATIKDTVKVAPGKFSADALSVLTAQIEAKFADR
VIADVGLCLCLHSYESIGDPYVYPSDGSAHYKASRFLRFSFVRFRMLVFR
PFVGEILAGRVSSCTKLGVKVSLEFFENATIPKDLLQAPSVFTRGEWIWS
YPDPDAENGGGKGEGASDEGEGSASEDVPFALALHDEVRFRVRTLEFTQV
TSTATGSLQATTVSTARGSGGAAGAVGRGGGAAGGAEPPTVRERGTSIDL
TSAEEAPSAMMITGSMNEEGLGLLSWWE*
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mRNA from alignment at S-dermatodea_contig1268:11042..20207+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig1268.1646.1 ID=mRNA_S-dermatodea_contig1268.1646.1|Name=mRNA_S-dermatodea_contig1268.1646.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=9166bp|location=Sequence derived from alignment at S-dermatodea_contig1268:11042..20207+ (Saccorhiza dermatodea SderLu1190fm monoicous)
TTTGAGCTCTGCTTCTTCATCCAAGCTCAGTGTCTGGCGATGTTCGTGCT
TGCGACGATCAAGGACACAGTGAAGGTGCGCGTATAGTATCGTCCGTGAG
CCTCTACGGCCGGGTAGGCCAGGGCATATTGGTAGCGACCTCTGGTCCTC
CAGAAAAGTACCTGACAGTCCCGGCTCTCTGTGGGCGGCGGCCACGCAAG
AGCCTGATGGCCTGATGAGGGTGAAAAGACGACTAGCAGTAGTTCAGTTG
TAGCTCTGCACCATGGGCAACAATCAGGTTGATCGCCGATAGGGGCTGAA
ACCAATACTGTACGTGGTTACGATTGAAGGCACGCATCTGGAAGAGATGG
GATGAGCCCATGCGACCACAGGTTGGAATTGGATTATCAGGTCGGCCAGT
CGGACGTGGGATTTCAAAAACACCAATGAGGTTGGCGGTACCCGAGCTAG
TAATATCTATGTAAGACAATCTCGGCGAAGCTGCCGCCATCCCGCACGCG
ACTAGATCTTATTCGCTCTCTCCTGTTTCTCTGTAGCGTACTTTGCAGCC
TCATCTCCGGGCACGGTTACATAGGAGCCACCATCCCCGCTGCCGCTATG
ATACCCCGCAACGCGACATCACGTGCGTGACGCAAATCATATTTGGTGTG
GCGATCGACGTCCTTGGTGAAACGTGGCCCCCTGATTGTCCAAACCCGAC
CAGCAACCAACAGTGACAGCAGTACAAGTATTCACGTATTTGTATTATAC
TCAAGTCACAATCGCACGGTGACTGTATTAACAGGTTGCCCCGGGCAAGT
TCAGCGCGGATGCCCTGAGCGTGTTGACGGCGCAGATAGAGGCAAAGTTC
GCGGACAGGGTCATCGCCGACGTGGGTCTCTGCTTGTGCCTCCACAGCTA
CGAGAGCATCGGCGACCCCTACGTGTATCCGTCTGACGGCTCCGCGCACT
ACAAGGCGAGCAGGTTCCTTCGTTTCTCCTTCGTTTGTCACGGGTTGTTT
TTATTAACTGACGCCGCAAGGAATTCCTGTGTATTATTTTCCTTACGAAA
GTTCAACATCCTCCTAAGCTTATGTCAAGGAATTCCTGCGTTTTTTTTTC
CTTACGAAAGTTCAACATCCTCCTAAGCTTATGTCAGCATGGTTTTGTTA
GGTCTGATCAACAAGGGATTTATAGGGTATATTGCCAGTCTCTCGGACAT
TTTGCTTTCCTGCCATACAGCACATGCAGGCGCAGCTACACAACACTCTG
CGTCAACCTTGCGACACACTGCGAGGGCGTCGGTGATGGATCGGTAGTGC
AGTTCGTGAGCAGATTTCAGATCCTCTACCCCCCGTCAAACAAGCAAAGT
ACCGCCAACGTCTGCATCGAGGCGAACCACACATAGCATCCCGATTCACA
TTGCATGCCTGGCCTGCGTTCCGCACCGGCACGCTCGAAGTTGCTGTATT
GTAATCCCAACTACTGCCTTCACCCGCTCTGTGCATCTTGGCCCCGTTGT
TAGCCACGAGAGACAGCACGAGTTAACGTTTTTCTTGTGCAATCCTTTGG
GGCGCGAACGGGCTGTACGCCTAGCTCAGCGTACTGTCGTTCCTCCATTC
GTCCGCGCCAGGTGCGGTTCCGCATGTTGGTGTTTCGACCCTTCGTGGGC
GAGATTCTGGCCGGAAGGGTTTCTTCGTGCACAAAACTTGGCGTCAAGGT
GGGCTGATGCGCGACCGCACTTTCTCTTAATGGATCGTGTTGATCTTGTT
GTTAAGCTGCTATTGTAGACTTGGTCCAAGCGCTCCTCCGCGGCCATGGC
ACATCCGTTGCGCGCACGTGAGACCGCGACTCAAAATTCGCGCCTTGGAT
TGAGCCTTAGCCTTTGCGAAATCGGCGGGTGGGGCACCCCTTGCGCTTGC
TCGATGCATTGGTTCCACTGTTTTCCTTACCGGTGGCGGGAGCGCAAGAT
GGAGTCGATTAAGAGGTGCCGCGCGTATCAACCTATGCGTTTGCTGTCGT
CGTCCTCCCATCAGGTGTCGCTGGAGTTCTTCGAGAATGCCACCATCCCA
AAGGATCTCCTCCAGGCGCCCTCTGTGTTGTGAGTCCTCGTGCAAATGTG
GCACTGTATTTTTTTTAACAAAGGGAATCTGAAGTGGCCCAGCGTGCGGT
AACCAACCCCAACCCCAGCTGGCGTGCCATGCGCAAAGAGAGGTGCATGA
TCGCTGCCCATCTGACCACAAGCTGGATCGGGCGTGTCGCCGATAGCTTA
TTATAAGTGTGAAAATATGACCATTGAATTATTCAATCAGACAATCAAAC
AGTACATCTCCGTCGCCGCTACACGTTGTTTTCGAGGTGGGCGTGTCCCA
GCTTCGCCGTGTCTTGCCGGCTAGGCTCTCGTTTATGGATCACGACCGGT
CGTCAATGCGTCGTTCGCTTCCGCAGTCTACGCCTCTCAAGAGGACATAA
AGTGCGGAAACAAAAGTCGAGGTTACGCCCTGTGCGAGCGACGTCCTCTC
TTTCCTCCCGCAGCCAGCTGCACACATTTTCGCGATACCAACCCCAGCAA
GAACTCACGAGCTAAGAACTCACGAGCTGGCAATTCGATGACATGACGCG
ATATCTACAGGAGGGGGCCAGTTTCCACACGAGTTCCTACGCGCGCTCGG
AATGCTGCAGCGTGCCACGCACTGTACTACTTGCTGGTCGAGAGCTCGCG
CGATCTCGTGCGTCTTGCGTGCGCCATGAAAGACAACTCTACTCCTTCTA
TTCGCCGTCGTGACGTAGCTAGCCCACCGCGCGCAAAGCCTCCTGCTTTG
GAGGCGTGTCGGGTGAGCGCACACGCTTCCGAGCACTAAACCATAGAGGA
AAATTAAAGTCATGCCCCCACAACCATACCTACCTACACGCTGATCGGTG
TTTCCTTCAAGAAAACAACAAGGTGTATACTTCGAAGTATATATACATCG
AATGAAACCCTGCGGTTTCTATCACGCTGCTTTTGTAGAATGGGATCCCA
GCTCGCATTCTGGCACCTCCCCCCAACCCCAACCCCGTCCCCGTCCCCGT
CCTGAGGACACTTGCTCACTGGTCTAACAGCTACCCCCCCCCCCCCACAC
CCCGCGTCTTTCCATCGGCGATCGATCCTGTGGAAACAATGCTTCGTCCT
CTCCATAACCGGCGGTCAATGGTCTAGCAGCTAAGGCATGCAAAACACGA
GTATCACCCCCCCACCCCCCCCCGCGCACGCTTACTTCCTTGGCTCGCAG
CACGCGCGGAGAATGGATATGGTCGTATCCTGACCCAGACGCGGAAAACG
GAGGGGGAAAGGGGGAGGGCGCGTCCGACGAGGGGGAGGGGAGCGCGTCG
GAGGATGTGCCATTCGCGCTGGCTCTTCACGACGAAGTTCGATTCCGTGT
CCGAACGCTGGAGTTCACCCAGGTGGGCTTCTGTTTTCCGCTTCGTGTCT
TGTTGGCTGTTTGTATATTCAGTTTGTACTAGTAAGTAGCCACGCCTACG
CCCGTGAGGTGTGCGGGGTCGCTCATGTCTAAAATCAAGTTGTTTGGTGC
TCACTAAAACATCACGTTGTCTGGCATCACTTTTTGGTTACATAAATCGT
ATAGGATTCATGTCACAGAAATCAACTCTAAATCGCTATTAGAAAAACTG
TCAAAGCGCTAGTGATTAATAAATGTGGTGCGTGTTTCAGCAGTTTGCGG
GTGCACGAAAACGAAAACGGAAATACATGGGGAAAGTTGTCGAGTGAACG
CACCACGGAGCACACAGGCGACGTTTTTTTTTGTGTTTCTGTGCCGCCGC
GAGTTTATCTCGAAAGAATCACGGGGTCCTAGTGGACGATGAAGGCTCGG
CGTTGTTTCCGAAGATATCTCGTAGCGCCGGGCTTTCGCGTTTCTTATTC
GCGTCGTACGTTGGACCTGCGGCTTTGACGGCTCGTGCCCGTGAGATTTT
CATCCCGTTCATGCCCTTGGATTGTGTCGTGGACAGAGTCCAGCACTGCC
TCGGATCGCCGATTTGCGTCGGATTTGGCGCCGGTTTTATGGGTAGGGGA
GATTTTGGTTGCACGTGAGTAATTTGATTGGCCAAAGTAGCGCCGCTTTA
GGGGTTTGTAATGAAAGTTTCCGACAACTTGGTAGCACAATTGATAGCAC
AAGGCCAATCACTACGTCGAACGGCGATGATGCTGCCGAAAGAACGGTGC
TATGACTAACAAATAAAATATATTAATGTTTATCTGAAACTATCTGAGAG
ACGACGGGGGCGCCGGACTGAGCATCGGTCTGTGGTGTCGTGCTCGAGCT
GTAGTACGCCAAATGCACCAGAACAAAGTGCCCAATACAGGGAACAACAA
GGGCTTTGCTATTTGCTTACTCGCGGGTACTTGGCGTCGTGTAAATCGCC
CACTTGAACACCGACAGTAGGCGAAAAGGTCTAAGGAGCCTCCAAGCCGT
GAGAAGGCACGTAGCACGTACATTCAGCGACACTCCAGGGTGTGTTGTGC
AGCCTCTAGTAAACGAAATACGTCCAAATTAAGCCTCCCGCGGAGCACAA
TAGCAGTAGCATCGATCGCACACGTGGTTTTGTTCGCAGAACACCTGTAG
CATAGAAGCAGCAGAGCGTATCCACGTGGAGACGGCGAAAAGGATTTCGG
CCAAGACGACCCGCTCGCTCCAAAATTGTTTGCTGTTTGACAATTTGTGA
GCGCAAGCAAGGACGAGGAAATGTAAATCCGAAGCGGTTGTATGACCCCT
TCGCGTTTTGTGCGTCGATCGTGCCCGCGTTCATGCATTGAAGTGGTGTG
TAGTGCGAGAAAATGACTATTATGTAGACCCTTCTCATGCTGGCCACCTG
CTCGCCTGAGAATATATTTTAGCGCCAACTCTGCAACCGTAGCCGACCGA
GAGACGTGGACTGCATGCTCAAAGCGCGCACCAATACGCACAGCATCCAA
CGAACCCCGTGAGCAAGGGGCTTCTGGTCCACTTTTCTGTGCCTCGTAAT
CTGCGGTGTGGCGTGAGGTAACCGCGCTCAAAGGTAGTCCTGTCAGCCAG
AGAAATCGCCCCATGGCTACAAAAACAGCAAAGGTGGATACTCAGCGACC
GCCCTTCGTTGTGTCCGAACGTCAACACAACCAACGGCGGATCACGTAGC
ACGCCCGAGGTAAAGTGCTTGCTCGCTCGCGTGCAAGATTTCAGCCTTGC
TCGTCACCAATCGGGTTAGATCTGCGCCACGGCGGGTAAGAGCTTTTTCT
TCGCCCTCCCCGCTTCCCCGCTTTTTCACGCTTCGCGTGAAAAAGTTAAT
TCCTGTGGAAACTACCAGTTTGGACCCGTACCCATTCAATCGGAGCCTCG
GATTTTGCTGACCCATCTTCTTGAGCTTTCCGCTGATAAAAACAAAAAAA
AGTCCTCCCTCCTCTGAAAAAAAGTCCGATTTCCGATTGTTCCGCTTTCG
ATCCTCGGGTCAACTACGCAAGGGGCGCACCCTCTTTGCGCCCGAAATAC
CACCGGGTCCTTGGTCGCGCGCACTGGCCTGCCGCGTTCTGGGTATGTCA
CCGACGTGACTCTGGCGCGCTGAGCTCGTCAATTTGTTTTTTTTCCTGCA
CCCTGTTTAACCGAGCATATTGATTGCTTCAGGGGAGGCTCTGCTTTGAA
TCGTGCCGTTTCGCGCGGAATATCATATCGCTACGGGTAGGTATATCACG
GTGACTGGCGCACGCACAAGTTAACACACCAGCCACTTTTTTTGTGTTTT
TGCACGCATACATGATAAACCGGCTATTCCTCGGTCCATCTGTGGTCACA
AGGGATCATCCCATCTATCTTATCCCCGGTTCTTACCTTAAGTTTTTATC
GCGCATTGGGTTAGGCACTCCCTGAGCTCGCCCCTTTCTCCGTGTTTTTA
ACCATGCGAGCTGAAAAGACGTATTCATAGTTGCAGATTTTGCGGCTTTT
ACACCGCCCCTTACGGCTATTAATATTAATAGGAGGAGCCACCGTTCGGT
CGCTGTTGGGTGTAAAATACGAGTTCGAGCAGATGGCCTAATAACTAACA
CCGAAGACGAACTCAGCCCCAAAGAGTGCTACGGGGAAAAATCGGCGTTC
CGGTCGGGGCAGTTTGTTAATTGGTGCTGCTTGTTGCCGAACCTCATGAG
CGCATGTCGCTCTGATCGTCACCGCCGACCTACCGGAAAGTGGTTCACAG
AAGAGTGCCACTTCGCTGAGCGAGCTATGGCGACCTCAGAGACGAGTTAG
TCTCGCCCCGACGGGTTTGTTGCAGCCGGCTGCTGCCGCTTAGCGTCAGT
GTTTCGACTACTGTTTCATATCCACGAGCCAAAAACCACGCCTCTCTCCA
TACCACACTTGTGGACGCAGACAGAGCGCGCATGGTGTGTTCGTCTCCAA
GGCGACGGACACAGGGTAACACACATCCGTATGCAAGTTTTGTGCATCTC
CTCGCAACGCTAGCGACACCAACGCCGCACGCATCTTGATTAATCCATGC
CGCTTCGCACGTCTTTTAATAGCGATTTCGAGTTGACCGTTGATGCCGAG
AATTTACTAACAGATGGTGCGAGGAATTTCCAATAGAATTCGCGATGCCA
AATGTCATAGGGATTTTATTTTAGAGTGTACCTGGAACTCTGTAACTTAT
GCCAATGTAACACTAACCCTCACGGGCGTATAGCCGTGGCTACCCACTAG
TACGACCGAATCACAATGCTTTTGCGCCACCCCTCCTTCCCACCCCCGAC
GCGCACCACGTGTTGCGACAAACCAACGTTGTCGATGCGTGATGTACATA
TGTACCAGGTAACGTCTACGGCAACCGGCAGCCTGCAGGCCACCACCGTG
TCGACGGCAAGAGGGAGCGGTGGCGCGGCCGGCGCCGTTGGACGAGGCGG
TGGCGCGGCGGGGGGCGCAGAACCGCCGACAGTACGGTGAGAGCGGTGTG
CGGAGAGGGGTGTGCGGATTCCGGGGGATGTTGTGGGTTCCGCGTGGAGG
AGGCAAGTGGGCGATCGCCCCTGAAAAGCTGGGTTGTGTTCTCGGCCAGT
GGAGCTGTGCTTTTGGTTCTACCCTGTACTTTGTTTTTTTTCTCTCTCTC
TCTTCGTATTTTCCGTCTGCGGGCATCGAAGGCATGAACAAAAAACGCCC
CAGACGTGGTGGCAAGTACCCGTAATATGTCTAGGTCCTGGGTCGAGAGG
GGAGCGATACGCGTTCGATCGGTGTCCGGCTTTTGTTAGTGGGCGTTGCA
TCCCCTCGGGGCCTCGCTTCTGGGCGTGCAGATAGCGTCCGTGGCCGCTG
TCGTGTTGTGTTCGGTCCAACGCCGTGGTCCCACAGACTGTAACATTTGA
ACCCTTTTGGTACTATAGTATAGTATTACCAACATTACTATATTGTTAGT
ATTATAGTACGGCTCTCCGAAACGACCAAAAGCTCTCTCGATGCCAGTCG
ACAGCTACGACAGCCCCGGTTGGTTCCCTGAGCCTCCTTTTTTTCTCTTA
TCCTGCGCCATAAGCCGTGGGTTTCGGTCCCCAGGGCTCCGCTTCAAGCA
CGCCTGATTACGTGCTAACCAGCGCTCTAAACAGGGGGCTAGTACCAAAA
GGGTTAATTAAGGTGGATGTATTCTTGGGCGCGTTTCACTACGTGTCGTG
TTCCTTGCTTTTCTTGCGTTGATGGCGTATTTGCAGCGCTTTTGTTTTTC
ACAAAAAAAAATCATATATATACATATACATTACTTTGTGTGCAGCTGAC
AAAAAAAATACAAGTACAAGTAAATGATGTGTTGTTGTTTTTTTTGTGCG
GTTTCTTTGGCGGTGGTGTTCCCAGCTACTGTAAGCTGACGAACAACGAT
TTTTAAATACCAGTACTTTTGCGGCTGAAGCATCATCGCCCAAAGAAGCG
AGACGCTAAGGCTAAAGTGAAAAGGTCGCAAGGACCGTCGACGTACCGTT
AATGGTGCCTGAGGCCAGCTCGGGGCCCGTGTGGGTCGTGGGCATGCACG
AGCGGGCCATCAGTGGGCGGAAAACGGGCAAGTGTGTTTCGGTGGGCGTG
GTGTGCTCTCATGAGTCGCCTCGGGGCGAATGTATTGAACGCAGAATTGT
TAATATATCCATGAACACATTCCGCATCACAATCGGTTAATAGTTCGAGA
AACACGAGAACATCAACTCCAAATCGCGGAATCCTTTCTAAACTACTTCC
GTTTTCGCCGAAAATCACATATTGTATAACATCGTCGCTTACGGGGGTAA
TGCTATTGCGGCGACGGCACGGCTACATATCGCGACTGCGCACCGTGCAT
GCCTGCGAGCTGAACGTGACAGGGTGCATTTTTTCCGCGGCAAACACTGC
TGCGGCGACGAGCAGCCGCGACCGGGTCATCGATTTCGATGCCAAATAAA
AACCGCGCGGGCAAATTGACCCCCGAAAAACGCTGTGACTACAATAGTCC
TGAACGGTGTTAAACCCTCTTGGGACTATTAGTACGTGTAGTCCTTTTTT
CTTTGTCGAAGTTCGTCACTTCGAGTACTTGTAATGCGGCGAAAGCCGTG
AGAAGAGCAGCATCACGAAAGGCATGCGAGGTAAGCGTGGTGCCCTGCTG
ACGTTTTCTCACCACCACCGTGCATGTTACACGACGATGGGCAGCCGGGG
GGTCGCTGTTTGGTGCGAAATACAGTACAACAAGTTCATGTAGTGCGCGG
CAGATGACCCCGGAAGCAGGATCGTTCCCAAAAGGGTTAACCTCTCCCCA
GATCATACTTCGCAGTATTTTATTTTTTTATCATCACACATACAGCATGT
CCGACCGGCCTGCCATTTTTGCGATTGCAAAATTGGTTGCTGACCCCGGT
CGTGGTCGCATGAAGGCACAACAAGAGCAAGTGAAATCCAGCACCCCTAC
ACGAAACACAAAGCTGATGTCCAGACGGGACAGATATATAAACCCGCACG
CTGCCCGGAGCTTGTACCGCCCGCCTTCCACCCACCCGTTCCCCGCTATA
TACCTATATACCCACCCCCCCGTGTGCGCCGCCGAAAAATGAAAAACGAT
GCAGAGAAAGAGGGACGAGCATAGACCTCACCAGCGCGGAAGAGGCGCCG
TCCGCGATGATGATAACGGGCAGCATGAATGAGGAAGGGTTAGGGCTGCT
GTCGTGGTGGGAGTGA
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Coding sequence (CDS) from alignment at S-dermatodea_contig1268:11042..20207+

>mRNA_S-dermatodea_contig1268.1646.1 ID=mRNA_S-dermatodea_contig1268.1646.1|Name=mRNA_S-dermatodea_contig1268.1646.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1674bp|location=Sequence derived from alignment at S-dermatodea_contig1268:11042..20207+ (Saccorhiza dermatodea SderLu1190fm monoicous)
TTTGAGCTCTGCTTCTTCATCCAAGCTCAGTGTCTGGCGATGTTCGTGCT
TGCGACGATCAAGGACACAGTGAAGTTTGAGCTCTGCTTCTTCATCCAAG
CTCAGTGTCTGGCGATGTTCGTGCTTGCGACGATCAAGGACACAGTGAAG
GTTGCCCCGGGCAAGTTCAGCGCGGATGCCCTGAGCGTGTTGACGGCGCA
GATAGAGGCAAAGTTCGCGGACAGGGTCATCGCCGACGTGGGTCTCTGCT
TGTGCCTCCACAGCTACGAGAGCATCGGCGACCCCTACGTGTATCCGTCT
GACGGCTCCGCGCACTACAAGGCGAGCAGGTTCCTTCGTTTCTCCTTCGT
TGCCCCGGGCAAGTTCAGCGCGGATGCCCTGAGCGTGTTGACGGCGCAGA
TAGAGGCAAAGTTCGCGGACAGGGTCATCGCCGACGTGGGTCTCTGCTTG
TGCCTCCACAGCTACGAGAGCATCGGCGACCCCTACGTGTATCCGTCTGA
CGGCTCCGCGCACTACAAGGCGAGCAGGTTCCTTCGTTTCTCCTTCGTGC
GGTTCCGCATGTTGGTGTTTCGACCCTTCGTGGGCGAGATTCTGGCCGGA
AGGGTTTCTTCGTGCACAAAACTTGGCGTCAAGGTGCGGTTCCGCATGTT
GGTGTTTCGACCCTTCGTGGGCGAGATTCTGGCCGGAAGGGTTTCTTCGT
GCACAAAACTTGGCGTCAAGGTGTCGCTGGAGTTCTTCGAGAATGCCACC
ATCCCAAAGGATCTCCTCCAGGCGCCCTCTGTGTTGTGTCGCTGGAGTTC
TTCGAGAATGCCACCATCCCAAAGGATCTCCTCCAGGCGCCCTCTGTGTT
CACGCGCGGAGAATGGATATGGTCGTATCCTGACCCAGACGCGGAAAACG
GAGGGGGAAAGGGGGAGGGCGCGTCCGACGAGGGGGAGGGGAGCGCGTCG
GAGGATGTGCCATTCGCGCTGGCTCTTCACGACGAAGTTCGATTCCGTGT
CCGAACGCTGGAGTTCACCCAGCACGCGCGGAGAATGGATATGGTCGTAT
CCTGACCCAGACGCGGAAAACGGAGGGGGAAAGGGGGAGGGCGCGTCCGA
CGAGGGGGAGGGGAGCGCGTCGGAGGATGTGCCATTCGCGCTGGCTCTTC
ACGACGAAGTTCGATTCCGTGTCCGAACGCTGGAGTTCACCCAGGTAACG
TCTACGGCAACCGGCAGCCTGCAGGCCACCACCGTGTCGACGGCAAGAGG
GAGCGGTGGCGCGGCCGGCGCCGTTGGACGAGGCGGTGGCGCGGCGGGGG
GCGCAGAACCGCCGACAGTACGGTAACGTCTACGGCAACCGGCAGCCTGC
AGGCCACCACCGTGTCGACGGCAAGAGGGAGCGGTGGCGCGGCCGGCGCC
GTTGGACGAGGCGGTGGCGCGGCGGGGGGCGCAGAACCGCCGACAGTACG
AGAAAGAGGGACGAGCATAGACCTCACCAGCGCGGAAGAGGCGCCGTCCG
CGATGATGATAACGGGCAGCATGAATGAGGAAGGGTTAGGGCTGCTGTCG
TGGTGGGAGTGAAGAAAGAGGGACGAGCATAGACCTCACCAGCGCGGAAG
AGGCGCCGTCCGCGATGATGATAACGGGCAGCATGAATGAGGAAGGGTTA
GGGCTGCTGTCGTGGTGGGAGTGA
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