mRNA_S-dermatodea_contig12677.1644.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig12677.1644.1
Unique NamemRNA_S-dermatodea_contig12677.1644.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig12677.1644.1 vs. uniprot
Match: A0A6H5JLA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLA3_9PHAE)

HSP 1 Score: 484 bits (1247), Expect = 8.850e-160
Identity = 264/342 (77.19%), Postives = 291/342 (85.09%), Query Frame = 3 
Query: 1017 PVPSYLQWRSREEADGASHEADHEAEEKRLRRKGGLSLSKARGGERADDSEDDATTPKGK----SLGAVKASRGG---AAAVSLSFSEAMFAGAVSRSIAQTCMQPANVVKTLLQGRGTSSQLSNLSFKLLTRGAGAQFVMSLPHGAFNFATLELILGCSAKIFPTEWRETAGPVLDFISSSVATLVCSVVSTPQMVITDRIMAGMYPNLVHGVREISRTEGLRGFYTGWSANVAQKIPSYGLTWVFFQQFKRLHQKATDRPPTITENFVLGAAAAGATVCIMIPMDTVKTRLVTQTVQAGVVPYRGVLETLSRVINEEGLGSLYRSLTPRLVSVVPMIGIQ 2021
            P PSYL+W S+  A+      D EA+ +  R K  L  S  R    A  S D AT P       SLGA KASRGG   +A+VSL+F+EAMFAGA+SRSIAQTCMQPANVVKTLLQGRGT+SQLSNLSFKLLTRGAGAQFVMS+PHGAFN+ATLE+ILGCSAKIFP EWRE AGPVLDF+SSSVAT+VCSVVSTPQMV+TDRIMAG+YPNL  GVREI+RT+GL GFY GWSANVAQKIPSYGLTWVFFQQFKRLH+KATDRPPT TENFVLGAAAAGATVCIMIPMDTVKTRLVTQT QAGVVPY+GVL+TL+R++ EEGLG +YRSLTPRLVSVVPMIGIQ
Sbjct:  277 PAPSYLRWPSKTAAESKQQGDDVEADGQN-RDKIALPRSTRRA---AGKSNDVATKPSSGEEEGSLGAAKASRGGGSGSASVSLTFTEAMFAGAISRSIAQTCMQPANVVKTLLQGRGTASQLSNLSFKLLTRGAGAQFVMSVPHGAFNYATLEVILGCSAKIFPDEWRERAGPVLDFLSSSVATVVCSVVSTPQMVLTDRIMAGIYPNLASGVREITRTQGLPGFYVGWSANVAQKIPSYGLTWVFFQQFKRLHRKATDRPPTNTENFVLGAAAAGATVCIMIPMDTVKTRLVTQTAQAGVVPYKGVLQTLTRIVREEGLGPIYRSLTPRLVSVVPMIGIQ 614
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BLAST of mRNA_S-dermatodea_contig12677.1644.1 vs. uniprot
Match: D7FP70_ECTSI (Mitochondrial energy transfer protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP70_ECTSI)

HSP 1 Score: 453 bits (1165), Expect = 1.080e-152
Identity = 227/253 (89.72%), Postives = 243/253 (96.05%), Query Frame = 3 
Query: 1263 MFAGAVSRSIAQTCMQPANVVKTLLQGRGTSSQLSNLSFKLLTRGAGAQFVMSLPHGAFNFATLELILGCSAKIFPTEWRETAGPVLDFISSSVATLVCSVVSTPQMVITDRIMAGMYPNLVHGVREISRTEGLRGFYTGWSANVAQKIPSYGLTWVFFQQFKRLHQKATDRPPTITENFVLGAAAAGATVCIMIPMDTVKTRLVTQTVQAGVVPYRGVLETLSRVINEEGLGSLYRSLTPRLVSVVPMIGIQ 2021
            MFAGAVSRSIAQTCMQPANVVKTLLQGRGT+SQLSNLSFKLLTRGAGAQFVMSLPHGAFN+ATLE+ILGCSAKIFP EWRE AGPVLDF+SSSVAT+VCSVVSTPQMV+TDRIMAG+YPNL  GVREI+RT+GL GFY GWSANVAQKIPSYGLTWVFFQQFKRLH+KATDRPPT TENFVLGAAAAGATVCIMIPMDTVKTRLVTQT QAGVVPY+GVL+TL+R++ EEGLG +YRSLTPRLVSVVPMIGIQ
Sbjct:    1 MFAGAVSRSIAQTCMQPANVVKTLLQGRGTASQLSNLSFKLLTRGAGAQFVMSLPHGAFNYATLEVILGCSAKIFPDEWRERAGPVLDFLSSSVATVVCSVVSTPQMVLTDRIMAGIYPNLASGVREITRTQGLPGFYVGWSANVAQKIPSYGLTWVFFQQFKRLHRKATDRPPTNTENFVLGAAAAGATVCIMIPMDTVKTRLVTQTAQAGVVPYKGVLQTLTRIVREEGLGPIYRSLTPRLVSVVPMIGIQ 253
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BLAST of mRNA_S-dermatodea_contig12677.1644.1 vs. uniprot
Match: A0A6H5JU70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU70_9PHAE)

HSP 1 Score: 387 bits (993), Expect = 1.010e-123
Identity = 197/272 (72.43%), Postives = 229/272 (84.19%), Query Frame = 3 
Query: 1206 AVKASRGGAAAVSLSFSEAMFAGAVSRSIAQTCMQPANVVKTLLQGRGTSSQLSNLSFKLLTRGAGAQFVMSLPHGAFNFATLELILGCSAKIFPTEWRETAGPVLDFISSSVATLVCSVVSTPQMVITDRIMAGMYPNLVHGVREISRTEGLRGFYTGWSANVAQKIPSYGLTWVFFQQFKRLHQKATDRPPTITENFVLGAAAAGATVCIMIPMDTVKTRLVTQTVQAGVVPYRGVLETLSRVINEEGLGSLYRSLTPRLVSVVPMIGIQ 2021
            A + SRGG   V L+F EA+FAGAVSRSIA T + PA VVKTL+QGRGTS+QLS+LS KLL+RGAGAQFVMSLPHGAFN+ATLE+I+G SAK FP +WRETAGPVLDF++S VATL+CSVVSTPQ+VI DRIM GMYPNLV G REISR+EGLRGFYTGWSANV+QKIPSYGLTWVF+Q  KRL++K T R PT TE+FVLGA AAG  VC+M+P+DTV TR+VTQ  Q G VPY+G   TL R++ EEGLG++Y SL  +LVSVVP IGIQ
Sbjct:  193 AARRSRGGGE-VHLNFKEALFAGAVSRSIAHTSVHPAIVVKTLMQGRGTSAQLSSLSLKLLSRGAGAQFVMSLPHGAFNYATLEVIMGLSAKFFPADWRETAGPVLDFVTSGVATLLCSVVSTPQVVIEDRIMTGMYPNLVSGFREISRSEGLRGFYTGWSANVSQKIPSYGLTWVFYQASKRLYKKITHRAPTATESFVLGAVAAGGAVCVMLPLDTVLTRVVTQRAQPGFVPYKGAFRTLGRIVKEEGLGAMYSSLPAKLVSVVPAIGIQ 463
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BLAST of mRNA_S-dermatodea_contig12677.1644.1 vs. uniprot
Match: A0A835Z5P9_9STRA (Mitochondrial energy transfer protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P9_9STRA)

HSP 1 Score: 351 bits (901), Expect = 2.850e-113
Identity = 178/253 (70.36%), Postives = 205/253 (81.03%), Query Frame = 3 
Query: 1263 MFAGAVSRSIAQTCMQPANVVKTLLQGRGTSSQLSNLSFKLLTRGAGAQFVMSLPHGAFNFATLELILGCSAKIFPTEWRETAGPVLDFISSSVATLVCSVVSTPQMVITDRIMAGMYPNLVHGVREISRTEGLRGFYTGWSANVAQKIPSYGLTWVFFQQFKRLHQKATDRPPTITENFVLGAAAAGATVCIMIPMDTVKTRLVTQTVQAGVVPYRGVLETLSRVINEEGLGSLYRSLTPRLVSVVPMIGIQ 2021
            MFAGA+SR+IAQT MQPANVVKTLLQGR TS QL +LSFKLLTRGAGAQF++SLPHGAFNFATLE +   ++   P       GPVLDF SS+VAT +CS++STPQMVITDRIMA +YPNL   VR IS+TEGL+GFY GW  N+AQKIPSYGLTWVFFQQFK  HQ+   R PT  ENF LGAAAAGATVCI+IP+DT KTR+VTQ    G+VPY GV+E + RVI EEG+G+LY++L PRL SVVPMIGIQ
Sbjct:    1 MFAGALSRAIAQTAMQPANVVKTLLQGRSTSGQLKHLSFKLLTRGAGAQFLLSLPHGAFNFATLEAVKEYTSSFLPA--AGAMGPVLDFFSSTVATTICSIISTPQMVITDRIMADIYPNLASAVRTISQTEGLKGFYAGWGPNLAQKIPSYGLTWVFFQQFKLAHQRVVRREPTNGENFALGAAAAGATVCILIPLDTAKTRIVTQVATPGLVPYTGVVECIQRVIREEGIGTLYKALGPRLASVVPMIGIQ 251
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BLAST of mRNA_S-dermatodea_contig12677.1644.1 vs. uniprot
Match: D7FWT2_ECTSI (Mitochondrial energy transfer protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT2_ECTSI)

HSP 1 Score: 347 bits (891), Expect = 6.580e-112
Identity = 169/229 (73.80%), Postives = 197/229 (86.03%), Query Frame = 3 
Query: 1335 LQGRGTSSQLSNLSFKLLTRGAGAQFVMSLPHGAFNFATLELILGCSAKIFPTEWRETAGPVLDFISSSVATLVCSVVSTPQMVITDRIMAGMYPNLVHGVREISRTEGLRGFYTGWSANVAQKIPSYGLTWVFFQQFKRLHQKATDRPPTITENFVLGAAAAGATVCIMIPMDTVKTRLVTQTVQAGVVPYRGVLETLSRVINEEGLGSLYRSLTPRLVSVVPMIGIQ 2021
            +QGRGTS+QLS+LS KLL RGAGAQF+MSLPHGAFN+ATLE+I+G SAK FP +WRETAGPVLDF++S VATL+CSVVSTPQ+VI DRIM GMYPNLV G REISR+EGLRGFYTGWSANV+QKIPSYGLTWVF+Q  KRL++K T R PT TE+FVLGA AAG  VC+M+P+DTV TR+VTQ  Q G VPY+G   TL R++NEEGLG++Y SL  +LVSVVP IGIQ
Sbjct:    1 MQGRGTSAQLSSLSLKLLRRGAGAQFIMSLPHGAFNYATLEVIMGFSAKFFPADWRETAGPVLDFVTSGVATLLCSVVSTPQVVIEDRIMTGMYPNLVSGFREISRSEGLRGFYTGWSANVSQKIPSYGLTWVFYQASKRLYKKITHRAPTATESFVLGAVAAGGAVCVMLPLDTVLTRVVTQRAQPGFVPYKGAFRTLGRIVNEEGLGAMYSSLPAKLVSVVPAIGIQ 229
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BLAST of mRNA_S-dermatodea_contig12677.1644.1 vs. uniprot
Match: A0A7S4D7A1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7A1_HETAK)

HSP 1 Score: 295 bits (755), Expect = 4.490e-90
Identity = 162/269 (60.22%), Postives = 196/269 (72.86%), Query Frame = 3 
Query: 1233 AAVSLS----FSEAMFAGAVSRSIAQTCMQPANVVKTLLQGRGTSSQLSNLSFKLLTRGAGAQFVMSLPHGAFNFATLELILGCSAKIFPTE-WRETAGPVLDFISSSVATLVCSVVSTPQMVITDRIMAGMYPNLVHGVREISRTEGLRGFYTGWSANVAQKIPSYGLTWVFFQQFKRLHQKATDRPPTITENFVLGAAAAGATVCIMIPMDTVKTRLVTQ-TVQAGVVPYRGVLETLSRVINEEGLGSLYRSLTPRLVSVVPMIGIQ 2021
            AAVSL+    ++E M AGAVSRS+AQT MQP NV+KTL Q  GT+ QL  +SFKLLTRGAGAQF++S+PHGA  FA +E        + P   W   AGP+ DF++S+V+T +CSVVSTPQMVITDR+MAG YP+L   V  I+RTEGLRGFY GW   +AQKIPSYGLTWV +Q  K  H+    R  T  ENF LGA AAGATVC+MIP+DTVKTR+VTQ +  A  VPYR +++  +RV  EEGLG+ Y +L PRL SVVPMIGIQ
Sbjct:   77 AAVSLAREMTWTEHMIAGAVSRSVAQTMMQPFNVMKTLKQAHGTADQLKQMSFKLLTRGAGAQFLLSMPHGAIAFAVVEQTKKTLTNLVPNAGWA--AGPLFDFMASTVSTTICSVVSTPQMVITDRLMAGRYPHLGAAVASIARTEGLRGFYNGWFTALAQKIPSYGLTWVLYQGAKDWHRGLVGREATDAENFGLGAFAAGATVCLMIPLDTVKTRIVTQPSASANFVPYRNMVDCFTRVFREEGLGAFYTALPPRLASVVPMIGIQ 343
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BLAST of mRNA_S-dermatodea_contig12677.1644.1 vs. uniprot
Match: W7THW6_9STRA (S-adenosylmethionine mitochondrial carrier protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7THW6_9STRA)

HSP 1 Score: 295 bits (755), Expect = 2.880e-88
Identity = 159/260 (61.15%), Postives = 191/260 (73.46%), Query Frame = 3 
Query: 1245 LSFSEAMFAGAVSRSIAQTCMQPANVVKTLLQGRGTSSQLSNLSFKLLTRGAGAQFVMSLPHGAFNFATLELILGCSAKIFPTEWRETAGPVLDFISSSVATLVCSVVSTPQMVITDRIMAGMYPNLVHGVREISRTEGLRGFYTGWSANVAQKIPSYGLTWVFFQQFKRLHQKATDRPPTITENFVLGAAAAGATVCIMIPMDTVKTRLVTQTVQ-AGVVPYRGVLETLSRVINEEGLGSLYRSLTPRLVSVVPMIGIQ 2021
            L+F   M AGAVSRS AQT M PANVVKTLLQ +G + +L+NL+ ++LTRGAGAQF +SLPHGA  FA LE      +  FP  +   AGP  DF+SS+V+T +CSV+STPQMV+TDRIMAG YPNLVHGVR + +T+G++G Y GW A +AQKIPSYGLTWVFFQQ K    +  D   T  ENF +GA AA ATVC+MIP+DTVKTR+VTQ    A  V Y+GV +  SRV+ EEGL + Y  L PRLVSVVPMIGIQ
Sbjct:  220 LTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTKG-AGELANLNVQILTRGAGAQFALSLPHGALAFAVLEATKSTLSSWFPVNF---AGPAFDFVSSAVSTTICSVISTPQMVLTDRIMAGYYPNLVHGVRTVLKTDGVQGLYAGWFAALAQKIPSYGLTWVFFQQLKIARNRWMDHEATNGENFGMGALAAAATVCVMIPLDTVKTRIVTQAANPAAGVHYKGVWDCFSRVLKEEGLKTFYAPLAPRLVSVVPMIGIQ 475
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BLAST of mRNA_S-dermatodea_contig12677.1644.1 vs. uniprot
Match: A0A4D9D1K6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1K6_9STRA)

HSP 1 Score: 275 bits (704), Expect = 7.830e-84
Identity = 145/240 (60.42%), Postives = 176/240 (73.33%), Query Frame = 3 
Query: 1305 MQPANVVKTLLQGRGTSSQLSNLSFKLLTRGAGAQFVMSLPHGAFNFATLELILGCSAKIFPTEWRETAGPVLDFISSSVATLVCSVVSTPQMVITDRIMAGMYPNLVHGVREISRTEGLRGFYTGWSANVAQKIPSYGLTWVFFQQFKRLHQKATDRPPTITENFVLGAAAAGATVCIMIPMDTVKTRLVTQTVQ-AGVVPYRGVLETLSRVINEEGLGSLYRSLTPRLVSVVPMIGIQ 2021
            M PANVVKTLLQ +G + +L+NL+ ++LTRGAGAQF +SLPHGA  FA LE      +  FP  +   AGP  DF+SS+V+T +CSV+STPQMV+TDRIMAG YPNL HGVR + +T+G++G Y GW A +AQKIPSYGLTWVFFQQ K    +  D   T  ENF +GA AA ATVC+MIP+DTVKTR+VTQ    A  V Y+GV +  SRV+ EEGL + Y  L PRLVSVVPMIGIQ
Sbjct:    1 MHPANVVKTLLQTKG-AGELANLNVQILTRGAGAQFALSLPHGALAFAVLEATKSTLSSWFPVNF---AGPAFDFVSSAVSTTICSVISTPQMVLTDRIMAGYYPNLAHGVRTVLKTDGVQGLYAGWFAALAQKIPSYGLTWVFFQQLKIARNRWMDHEATNGENFGMGALAAAATVCVMIPLDTVKTRIVTQAANPAAGVHYKGVWDCFSRVLKEEGLKTFYAPLAPRLVSVVPMIGIQ 236
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BLAST of mRNA_S-dermatodea_contig12677.1644.1 vs. uniprot
Match: A0A7S2PBP1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PBP1_9STRA)

HSP 1 Score: 270 bits (691), Expect = 2.360e-80
Identity = 150/276 (54.35%), Postives = 181/276 (65.58%), Query Frame = 3 
Query: 1245 LSFSEAMFAGAVSRSIAQTCMQPANVVKTLLQGRGTSSQLS--------NLSF---------KLLTRGAGAQFVMSLPHGAFNFATLELILGCSAKIFPTEWRETAGPVLDFISSSVATLVCSVVSTPQMVITDRIMAGMYPNLVHGVREISRTEGLRGFYTGWSANVAQKIPSYGLTWVFFQQFKRLHQKATDRPPTITENFVLGAAAAGATVCIMIPMDTVKTRLVTQTVQAGVVPYRGVLETLSRVINEEGLGSLYRSLTPRLVSVVPMIGIQ 2021
            L F E M  GAVSRS+AQT M PAN +KT+LQ RG+ SQ S         L+F         K+LTRGAGAQF+MS+PHGA NFA LE +     +IF        G  LDF+SS VAT  CSVVSTPQM+ITD IMAG YPNL   V  +++ +G+ GFYTGW   +  KIPSYGLTWVFFQQ KR+  +   R P   EN ++G  A+  TVCIMIP+DT+KTRLVTQ     ++PY G+ +   R+  EEG G+ YR L PRLVSVVPMIGIQ
Sbjct:   98 LLFWENMVCGAVSRSMAQTIMHPANTMKTILQSRGSQSQASLFGVAEGEALTFTKLARLRNLKVLTRGAGAQFIMSVPHGAVNFAVLEYVRKQMGRIFQ---NSNMGFGLDFLSSCVATFCCSVVSTPQMMITDNIMAGTYPNLSAAVTGLAKDKGVMGFYTGWFPGLVGKIPSYGLTWVFFQQLKRMQLQIMKREPFDIENSIMGCMASATTVCIMIPVDTIKTRLVTQLNYPDMIPYNGIFDAAVRITKEEGFGAFYRGLAPRLVSVVPMIGIQ 370
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BLAST of mRNA_S-dermatodea_contig12677.1644.1 vs. uniprot
Match: A0A7S1BNE3_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BNE3_9STRA)

HSP 1 Score: 268 bits (685), Expect = 2.330e-79
Identity = 143/278 (51.44%), Postives = 178/278 (64.03%), Query Frame = 3 
Query: 1245 LSFSEAMFAGAVSRSIAQTCMQPANVVKTLLQGRGTSSQLSNLSF-----------------KLLTRGAGAQFVMSLPHGAFNFATLELILGCSAKIFPTEWRETA--GPVLDFISSSVATLVCSVVSTPQMVITDRIMAGMYPNLVHGVREISRTEGLRGFYTGWSANVAQKIPSYGLTWVFFQQFKRLHQKATDRPPTITENFVLGAAAAGATVCIMIPMDTVKTRLVTQTVQAGVVPYRGVLETLSRVINEEGLGSLYRSLTPRLVSVVPMIGIQ 2021
            L F E M  GAVSRS+AQT M PAN +KT+LQ RG     S                     ++L RGAGAQ ++SLPHGA NFA LE       K+     +     GP LDF+SS +AT+ CSVVSTPQM+ITD IMAG YPN+   +  +++ +GL+GFYTGW   +A KIPSYGLTWV FQQ K++  +   RPP   EN V+GA A+  TV IMIPMDT+KTRLVTQ     +VPY+G+ +   R++ EEGL + YR L PRL+SVVPMIGIQ
Sbjct:  118 LCFWETMICGAVSRSVAQTIMHPANTMKTILQSRGGPDAASQFGLEAGRCLIPRDFLRPPVLRVLKRGAGAQLLLSLPHGALNFAVLETTRRALGKMVGEGMKNATRVGPGLDFLSSGIATVCCSVVSTPQMMITDNIMAGTYPNMAKAISGLAQNQGLKGFYTGWFPGIAGKIPSYGLTWVLFQQLKKMQLRIMQRPPKNYENSVMGALASATTVSIMIPMDTIKTRLVTQVNYPNLVPYKGIADAFLRILREEGLVAFYRGLPPRLISVVPMIGIQ 395
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12677.1644.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLA3_9PHAE8.850e-16077.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FP70_ECTSI1.080e-15289.72Mitochondrial energy transfer protein n=1 Tax=Ecto... [more]
A0A6H5JU70_9PHAE1.010e-12372.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z5P9_9STRA2.850e-11370.36Mitochondrial energy transfer protein n=1 Tax=Trib... [more]
D7FWT2_ECTSI6.580e-11273.80Mitochondrial energy transfer protein n=1 Tax=Ecto... [more]
A0A7S4D7A1_HETAK4.490e-9060.22Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7THW6_9STRA2.880e-8861.15S-adenosylmethionine mitochondrial carrier protein... [more]
A0A4D9D1K6_9STRA7.830e-8460.42Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2PBP1_9STRA2.360e-8054.35Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1BNE3_9STRA2.330e-7951.44Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12677contigS-dermatodea_contig12677:1561..5388 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score456.1
Seed ortholog evalue2.7e-125
Seed eggNOG ortholog2880.D7FP70
KEGG koko:K14684
KEGG TC2.A.29.23
EggNOG free text desc.S-adenosyl-L-methionine transmembrane transport
EggNOG OGsKOG0768@1,KOG0768@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionMitochondrial substrate/solute carrier
Ec32 orthologEc-16_004290.1
Exons5
Model size2021
Cds size1896
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12677.1644.1prot_S-dermatodea_contig12677.1644.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig12677 1686..5388 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924257.4069076-UTR-S-dermatodea_contig12677:1560..16851622924257.4069076-UTR-S-dermatodea_contig12677:1560..1685Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12677 1561..1685 +
1694079130.197367-UTR-S-dermatodea_contig12677:1560..16851694079130.197367-UTR-S-dermatodea_contig12677:1560..1685Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12677 1561..1685 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924257.419838-CDS-S-dermatodea_contig12677:1685..30171622924257.419838-CDS-S-dermatodea_contig12677:1685..3017Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12677 1686..3017 +
1694079130.207084-CDS-S-dermatodea_contig12677:1685..30171694079130.207084-CDS-S-dermatodea_contig12677:1685..3017Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12677 1686..3017 +
1622924257.43047-CDS-S-dermatodea_contig12677:3711..38501622924257.43047-CDS-S-dermatodea_contig12677:3711..3850Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12677 3712..3850 +
1694079130.2148674-CDS-S-dermatodea_contig12677:3711..38501694079130.2148674-CDS-S-dermatodea_contig12677:3711..3850Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12677 3712..3850 +
1622924257.4411666-CDS-S-dermatodea_contig12677:4367..44911622924257.4411666-CDS-S-dermatodea_contig12677:4367..4491Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12677 4368..4491 +
1694079130.268296-CDS-S-dermatodea_contig12677:4367..44911694079130.268296-CDS-S-dermatodea_contig12677:4367..4491Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12677 4368..4491 +
1622924257.453777-CDS-S-dermatodea_contig12677:4651..47681622924257.453777-CDS-S-dermatodea_contig12677:4651..4768Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12677 4652..4768 +
1694079130.27828-CDS-S-dermatodea_contig12677:4651..47681694079130.27828-CDS-S-dermatodea_contig12677:4651..4768Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12677 4652..4768 +
1622924257.4628878-CDS-S-dermatodea_contig12677:5204..53881622924257.4628878-CDS-S-dermatodea_contig12677:5204..5388Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12677 5205..5388 +
1694079130.2916-CDS-S-dermatodea_contig12677:5204..53881694079130.2916-CDS-S-dermatodea_contig12677:5204..5388Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12677 5205..5388 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig12677.1644.1

>prot_S-dermatodea_contig12677.1644.1 ID=prot_S-dermatodea_contig12677.1644.1|Name=mRNA_S-dermatodea_contig12677.1644.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=632bp
MDSCDHDVRSRGNPRPPQAHHVALGAVWEGLRSSRMILFAVSALLLSTSP
CQASGVSVRVIPSLPIGSRSGTNGRTVGSNGEGCGKGNKGGSNGSEGGIR
AGGSPGANRGPRRGAILGGTLLARRRDDARDATPATNRSNSDRRGMLWRR
GEQLGGVNATTADRNDRRTGLYAPRFALPTWVHTKQATLPRKEAVLRTLS
AARAAVGSAESGRDSQERPRRPSGVRWSRLRRNRGATSTMTAGGEEKQRE
GKGVDSSKSGAGASTLDKAPSTPKETTGAAAMVVAVPSKLSVRVSPSPVP
SYLQWRSREEADGASHEADHEAEEKRLRRKGGLSLSKARGGERADDSEDD
ATTPKGKSLGAVKASRGGAAAVSLSFSEAMFAGAVSRSIAQTCMQPANVV
KTLLQGRGTSSQLSNLSFKLLTRGAGAQFVMSLPHGAFNFATLELILGCS
AKIFPTEWRETAGPVLDFISSSVATLVCSVVSTPQMVITDRIMAGMYPNL
VHGVREISRTEGLRGFYTGWSANVAQKIPSYGLTWVFFQQFKRLHQKATD
RPPTITENFVLGAAAAGATVCIMIPMDTVKTRLVTQTVQAGVVPYRGVLE
TLSRVINEEGLGSLYRSLTPRLVSVVPMIGIQ
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mRNA from alignment at S-dermatodea_contig12677:1561..5388+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig12677.1644.1 ID=mRNA_S-dermatodea_contig12677.1644.1|Name=mRNA_S-dermatodea_contig12677.1644.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3828bp|location=Sequence derived from alignment at S-dermatodea_contig12677:1561..5388+ (Saccorhiza dermatodea SderLu1190fm monoicous)
TGCTGTGCTCCAAGGCCGCTCGGTTTCCCTACAACCTGGGTACCTGGCTT
CTTGTGTAACGAGCACAGGGTTTGATTATCCCCCCGAAGTTTCCCCTATT
CGACGGCGACTCGTTGCGACCGCTCATGGACTCATGTGATCATGATGTTC
GGTCGCGGGGCAACCCTCGCCCCCCGCAGGCTCATCATGTGGCCCTGGGC
GCTGTTTGGGAAGGCTTGAGGAGCTCTAGGATGATACTCTTCGCCGTGAG
CGCTCTCCTCCTCAGCACGTCGCCTTGCCAGGCTAGCGGTGTCAGCGTTC
GAGTGATCCCTTCGCTTCCGATCGGAAGCAGGAGCGGCACCAACGGCCGC
ACTGTTGGCAGCAACGGCGAGGGCTGCGGCAAGGGTAACAAGGGCGGCAG
CAACGGTAGCGAGGGCGGCATCAGAGCTGGGGGTAGTCCAGGAGCTAACA
GGGGACCGCGGCGGGGTGCCATTCTGGGAGGAACGCTTCTCGCACGACGA
CGAGACGATGCAAGAGACGCTACCCCCGCGACCAACCGCTCCAACTCGGA
CAGGCGTGGTATGCTCTGGCGGCGCGGGGAGCAACTCGGAGGCGTAAACG
CGACCACCGCTGATCGAAACGATAGGCGGACAGGGCTCTACGCACCTCGG
TTCGCCTTGCCCACGTGGGTGCACACCAAGCAGGCCACGTTGCCAAGGAA
GGAGGCGGTTTTGCGCACGTTGTCGGCCGCAAGAGCGGCAGTCGGCTCAG
CGGAGAGCGGTCGGGATTCGCAGGAACGCCCTCGGCGGCCGTCCGGTGTG
AGGTGGTCGCGGCTGCGGCGGAATCGCGGTGCAACTTCAACGATGACAGC
GGGCGGCGAAGAGAAACAACGGGAGGGGAAAGGCGTCGATTCCTCTAAGA
GCGGAGCGGGTGCGAGCACTCTCGACAAGGCACCGTCAACGCCTAAGGAG
ACGACTGGTGCGGCGGCGATGGTGGTGGCGGTACCCTCCAAGTTGAGCGT
AAGGGTATCGCCTTCCCCAGTGCCATCGTACCTTCAGTGGCGATCGCGTG
AGGAGGCAGACGGTGCATCTCATGAGGCTGATCATGAGGCTGAGGAGAAA
CGATTGCGCAGGAAAGGGGGACTGTCTCTGAGCAAGGCACGTGGCGGCGA
GCGCGCGGACGACTCCGAGGACGACGCGACTACTCCGAAAGGGAAGTCTT
TGGGGGCGGTTAAGGCTTCCAGGGGGGGCGCGGCCGCTGTGAGCTTGTCG
TTTTCGGAGGCAATGTTTGCCGGGGCTGTGTCCAGGAGCATAGCGCAGAC
TTGCATGCAGCCGGCGAACGTGGTGAAGACGCTGCTGCAGGGGCGGGGGA
CATCATCGCAGCTTTCGAACCTGTCGTTCAAGCTGCTCACTAGGGGCGCC
GGGGCGCAGTTTGTGATGTCGCTGCCTCACGGCGCGTTCAACTTCGCCAC
ACTAGAGGTGCGTGTGATCGCCATGTACCGTTACCATTACAGCAGCATGC
ATACTTGCATACTGCCGCAGGATGTTCCGGCGGGCGTGCAATTGATGTCG
ACGTCGCCGCTCCGGCAAGTGGTTGCACCGCAGTGTATACAAGTGATGTC
TCGTTATCGCTGTGGTTGCCAAGCCAGCGATCGTGGTGGCGCCGACTTGC
GGTGTAATACTTGCCTTTCTCAATCGGCTTTCAGACGCCGAGCGGTACGT
TATGGCTCTCGTCTCCACCCCGCAGGGTCAGGAGGCCACAAGACCTAACA
TAGAGTGCTCCACATTTCCAAACCGATTTACGTTGGCCGCAAGAACTAAT
TTTCCCCAAAGAGCTGCGTAATCGCCAGTATCTTTGCACATCCCCCCGCC
AATCACATCGAGGCCTATCATGTACCTGGTACAACGTTCCAAGGGGTGGA
GTTGGCTGTTGAGTTGGCTGTGGAGTTCATGAGTTCCAGATGCGTATTCT
TTGCTGCATGTAACAGGCGATGCGGTTGGCAACGAGCAGGCAACAGCCGC
GCTCCTGCGCGTCTCAATGCCCTCGGTGATTATCCCATCGGTCGTATGAT
GCATAGTCCTCCGTCAACGCAGCGCAGTTTGTTGCCCAACCCCCATTCAT
CGGCGGTGGCGTTTCGGGCCCCTGTGTCCTTGTCGGCGTTTGTCACGATA
GTTAATCTTGGGATGTTCGGCCAAGATCTTCCCGACGGAGTGGAGGGAGA
CGGCGGGGCCCGTCCTAGATTTTATTTCGTCCAGCGTGGCGACTCTCGTG
TGCTCGGTCGTCAGCACTCCGCAGATGGTCATTACCGATCGTGAGTGCAC
CTGCTGTCGATGGCTCGAGTTGATATCCACACCACGTGTTGGCCGTGTTT
CAGGCTGCCCATGGACTGCTTATCGCTTGACCGGGGAGGATTTGTGCCGT
GGTTTTGGGGTGGCGTAGTGACACATTTTTTTCAAGACATCTAATTTGTA
TTGGATCAAGGTACCGGTGGACACAAGCAGTGGCCTTTCACGCTGAACAT
GGAGATATTTTGACGGGTGCATCGGCGCAAGACCCACGGATTTATTCTGC
ATCGTATGGAGGCTTTTTCTGCCTGCTTTTTTTATGTACAGACGTGGGTT
ATCGACTACAACGCGCTGAGGCACACCTGGCCATTCTTTGCGTCCGTCGC
CTGTGCGCTTCCACGCTTCCTCCGTGGCGCACAATCAGCGCAAGGTCAAC
CACTCTTGCCCTAAAAACAGCGGTCGTTTTTACCAAGTTAGCCTTACTCC
TTCGCACCTTGAAGCCTGCATTAATTGTCACTGTCCTTGGATTCATCTGT
GTGGCAGGAATCATGGCCGGCATGTACCCCAACCTTGTACATGGCGTCCG
TGAGATATCGCGAACAGAAGGACTCAGGGGGTTCTACACCGGGTGGAGCG
CTAATGTCGCGCAAAAAATTCCTAGCTACGGGTGAGTGCCGGCCCTTCAG
ACCGCGTTTCGGCGTTCAGCCAATCGTTATTGCCTCGGTCTGTTCCTGGT
GGGGGGTACATGGAGATTCGAAGGCTTTATTATGCTCTGCCTCACTCTGA
TGCTGTTTGCCGACGCCTCACTTTCTGTATCACGTGTTCAGGCTAACGTG
GGTATTCTTCCAGCAGTTTAAGCGGTTGCACCAGAAAGCCACCGACCGCC
CTCCTACCATCACCGAGAACTTCGTGCTGGGGGCAGCAGCGGCGGGAGCT
ACGGTTTGGTGAGAGGCGGGAGATATTCGTTGCGCGAAAGAGCAAGGCCG
TTCCTGTAGCATTTTTGTGTCTGCATACTGCTGCCCACGTTAGCACCCGG
GACCAATTGTCAGCTCCAAGTGTCGTATATTGTGATTTGCATAGCGCGAT
GGTACCCTCGCATTGTTTGTTCGACGATGTGGACGCAAGACACACGTGGT
GCCCGTGCATGTTATCTTGGACATTTACAGTTATAGGGCCTACCTGAAGC
GTGGTGTGCTTGACAACATGTCCTGGTGACTATCTAGTCCCCGAGTTACC
TCTCGTCGAACCATTGAATAGCCGTGCTCTGTGCAACCGCGTCCTGTTAG
TGAGTCGCGTACTTCAACAACATGCACTACTCCCGCCAGACCACTACATG
CGCTCACTTGCCTCTCGATGTACACTCGATCTGTCTCACGGCAGCATCAT
GATCCCGATGGACACCGTGAAGACGCGACTGGTGACGCAAACGGTGCAGG
CGGGCGTTGTACCGTACCGAGGCGTGCTGGAGACGCTTTCTAGGGTCATC
AACGAGGAAGGGCTCGGTTCGCTCTATCGCTCGCTGACGCCGAGGCTGGT
GTCCGTCGTGCCCATGATAGGGATCCAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig12677:1561..5388+

>mRNA_S-dermatodea_contig12677.1644.1 ID=mRNA_S-dermatodea_contig12677.1644.1|Name=mRNA_S-dermatodea_contig12677.1644.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3792bp|location=Sequence derived from alignment at S-dermatodea_contig12677:1561..5388+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGACTCATGTGATCATGATGTTCGGTCGCGGGGCAACCCTCGCCCCCC
GCAGGCTCATCATGTGGCCCTGGGCGCTGTTTGGGAAGGCTTGAGGAGCT
CTAGGATGATACTCTTCGCCGTGAGCGCTCTCCTCCTCAGCACGTCGCCT
TGCCAGGCTAGCGGTGTCAGCGTTCGAGTGATCCCTTCGCTTCCGATCGG
AAGCAGGAGCGGCACCAACGGCCGCACTGTTGGCAGCAACGGCGAGGGCT
GCGGCAAGGGTAACAAGGGCGGCAGCAACGGTAGCGAGGGCGGCATCAGA
GCTGGGGGTAGTCCAGGAGCTAACAGGGGACCGCGGCGGGGTGCCATTCT
GGGAGGAACGCTTCTCGCACGACGACGAGACGATGCAAGAGACGCTACCC
CCGCGACCAACCGCTCCAACTCGGACAGGCGTGGTATGCTCTGGCGGCGC
GGGGAGCAACTCGGAGGCGTAAACGCGACCACCGCTGATCGAAACGATAG
GCGGACAGGGCTCTACGCACCTCGGTTCGCCTTGCCCACGTGGGTGCACA
CCAAGCAGGCCACGTTGCCAAGGAAGGAGGCGGTTTTGCGCACGTTGTCG
GCCGCAAGAGCGGCAGTCGGCTCAGCGGAGAGCGGTCGGGATTCGCAGGA
ACGCCCTCGGCGGCCGTCCGGTGTGAGGTGGTCGCGGCTGCGGCGGAATC
GCGGTGCAACTTCAACGATGACAGCGGGCGGCGAAGAGAAACAACGGGAG
GGGAAAGGCGTCGATTCCTCTAAGAGCGGAGCGGGTGCGAGCACTCTCGA
CAAGGCACCGTCAACGCCTAAGGAGACGACTGGTGCGGCGGCGATGGTGG
TGGCGGTACCCTCCAAGTTGAGCGTAAGGGTATCGCCTTCCCCAGTGCCA
TCGTACCTTCAGTGGCGATCGCGTGAGGAGGCAGACGGTGCATCTCATGA
GGCTGATCATGAGGCTGAGGAGAAACGATTGCGCAGGAAAGGGGGACTGT
CTCTGAGCAAGGCACGTGGCGGCGAGCGCGCGGACGACTCCGAGGACGAC
GCGACTACTCCGAAAGGGAAGTCTTTGGGGGCGGTTAAGGCTTCCAGGGG
GGGCGCGGCCGCTGTGAGCTTGTCGTTTTCGGAGGCAATGTTTGCCGGGG
CTGTGTCCAGGAGCATAGCGCAGACTTGCATGCAGCCGGCGAACGTGGTG
AAGACGCTGCTGCAGGGGCGGGGGACATCATCGCAGCTTTCGAACCTGTC
GTTCAAGCTGCTCACTAGGGGCGCCGGGGCGCAGTTTGTGATGTCGCTGC
CTCACGGCGCGTTCAACTTCGCCACACTAGAGATGGACTCATGTGATCAT
GATGTTCGGTCGCGGGGCAACCCTCGCCCCCCGCAGGCTCATCATGTGGC
CCTGGGCGCTGTTTGGGAAGGCTTGAGGAGCTCTAGGATGATACTCTTCG
CCGTGAGCGCTCTCCTCCTCAGCACGTCGCCTTGCCAGGCTAGCGGTGTC
AGCGTTCGAGTGATCCCTTCGCTTCCGATCGGAAGCAGGAGCGGCACCAA
CGGCCGCACTGTTGGCAGCAACGGCGAGGGCTGCGGCAAGGGTAACAAGG
GCGGCAGCAACGGTAGCGAGGGCGGCATCAGAGCTGGGGGTAGTCCAGGA
GCTAACAGGGGACCGCGGCGGGGTGCCATTCTGGGAGGAACGCTTCTCGC
ACGACGACGAGACGATGCAAGAGACGCTACCCCCGCGACCAACCGCTCCA
ACTCGGACAGGCGTGGTATGCTCTGGCGGCGCGGGGAGCAACTCGGAGGC
GTAAACGCGACCACCGCTGATCGAAACGATAGGCGGACAGGGCTCTACGC
ACCTCGGTTCGCCTTGCCCACGTGGGTGCACACCAAGCAGGCCACGTTGC
CAAGGAAGGAGGCGGTTTTGCGCACGTTGTCGGCCGCAAGAGCGGCAGTC
GGCTCAGCGGAGAGCGGTCGGGATTCGCAGGAACGCCCTCGGCGGCCGTC
CGGTGTGAGGTGGTCGCGGCTGCGGCGGAATCGCGGTGCAACTTCAACGA
TGACAGCGGGCGGCGAAGAGAAACAACGGGAGGGGAAAGGCGTCGATTCC
TCTAAGAGCGGAGCGGGTGCGAGCACTCTCGACAAGGCACCGTCAACGCC
TAAGGAGACGACTGGTGCGGCGGCGATGGTGGTGGCGGTACCCTCCAAGT
TGAGCGTAAGGGTATCGCCTTCCCCAGTGCCATCGTACCTTCAGTGGCGA
TCGCGTGAGGAGGCAGACGGTGCATCTCATGAGGCTGATCATGAGGCTGA
GGAGAAACGATTGCGCAGGAAAGGGGGACTGTCTCTGAGCAAGGCACGTG
GCGGCGAGCGCGCGGACGACTCCGAGGACGACGCGACTACTCCGAAAGGG
AAGTCTTTGGGGGCGGTTAAGGCTTCCAGGGGGGGCGCGGCCGCTGTGAG
CTTGTCGTTTTCGGAGGCAATGTTTGCCGGGGCTGTGTCCAGGAGCATAG
CGCAGACTTGCATGCAGCCGGCGAACGTGGTGAAGACGCTGCTGCAGGGG
CGGGGGACATCATCGCAGCTTTCGAACCTGTCGTTCAAGCTGCTCACTAG
GGGCGCCGGGGCGCAGTTTGTGATGTCGCTGCCTCACGGCGCGTTCAACT
TCGCCACACTAGAGTTAATCTTGGGATGTTCGGCCAAGATCTTCCCGACG
GAGTGGAGGGAGACGGCGGGGCCCGTCCTAGATTTTATTTCGTCCAGCGT
GGCGACTCTCGTGTGCTCGGTCGTCAGCACTCCGCAGATGGTCATTACCG
ATCTTAATCTTGGGATGTTCGGCCAAGATCTTCCCGACGGAGTGGAGGGA
GACGGCGGGGCCCGTCCTAGATTTTATTTCGTCCAGCGTGGCGACTCTCG
TGTGCTCGGTCGTCAGCACTCCGCAGATGGTCATTACCGATCGAATCATG
GCCGGCATGTACCCCAACCTTGTACATGGCGTCCGTGAGATATCGCGAAC
AGAAGGACTCAGGGGGTTCTACACCGGGTGGAGCGCTAATGTCGCGCAAA
AAATTCCTAGCTACGGGAATCATGGCCGGCATGTACCCCAACCTTGTACA
TGGCGTCCGTGAGATATCGCGAACAGAAGGACTCAGGGGGTTCTACACCG
GGTGGAGCGCTAATGTCGCGCAAAAAATTCCTAGCTACGGGCTAACGTGG
GTATTCTTCCAGCAGTTTAAGCGGTTGCACCAGAAAGCCACCGACCGCCC
TCCTACCATCACCGAGAACTTCGTGCTGGGGGCAGCAGCGGCGGGAGCTA
CGGTTTGGCTAACGTGGGTATTCTTCCAGCAGTTTAAGCGGTTGCACCAG
AAAGCCACCGACCGCCCTCCTACCATCACCGAGAACTTCGTGCTGGGGGC
AGCAGCGGCGGGAGCTACGGTTTGCATCATGATCCCGATGGACACCGTGA
AGACGCGACTGGTGACGCAAACGGTGCAGGCGGGCGTTGTACCGTACCGA
GGCGTGCTGGAGACGCTTTCTAGGGTCATCAACGAGGAAGGGCTCGGTTC
GCTCTATCGCTCGCTGACGCCGAGGCTGGTGTCCGTCGTGCCCATGATAG
GGATCCAGCATCATGATCCCGATGGACACCGTGAAGACGCGACTGGTGAC
GCAAACGGTGCAGGCGGGCGTTGTACCGTACCGAGGCGTGCTGGAGACGC
TTTCTAGGGTCATCAACGAGGAAGGGCTCGGTTCGCTCTATCGCTCGCTG
ACGCCGAGGCTGGTGTCCGTCGTGCCCATGATAGGGATCCAG
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