mRNA_S-dermatodea_contig12643.1631.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig12643.1631.1 vs. uniprot
Match: A0A1V0SKG2_9VIRU (HNH endonuclease n=1 Tax=Klosneuvirus KNV1 TaxID=1977640 RepID=A0A1V0SKG2_9VIRU) HSP 1 Score: 188 bits (477), Expect = 3.800e-52 Identity = 117/337 (34.72%), Postives = 176/337 (52.23%), Query Frame = 1
Query: 94 LSNSCSNHNCINPSHL--EIVPKSLDDVWKRMLEKTRREN--ECLLWTGSTNK--GYGQTTVYSKIMSAHRASYLIKTKGEPIPR-EIDGMTAHVRHLCGKSLCVNPDHLEIGTIV-SNHQDKAVHGTSMVGERSHLAKITEEKATQIKTSKLCEEEDGFESQTERAERFGVSLVTVRNIDSGKTWCHVKDRFGNTTNNDRLRKRKRETYSANQKQVWGDKDFEAAGEILYKRISKSTTDKRCDIPGDCWNFT-GCTSHGYGQIQIMGKHRGAHVMSCEIATKRAIEPREVTRHLCGNKLCIAPHHLQFGDPSENGLDCLKHGSKACKLDEEKVRNI 1077
+ +C CINP HL + + + D W+R+L K +R+ CLLW GS K GYG + + H ASY IK K + + + +VRH+C C P HLE+GT+ +N++DK GT + G ++ A I EE A +IK SK + + +++ +RA+ F VS V IDSGK+W + D GNT + +RK ++ + W + FE A + + K ++ G CW + G GYG++ + GK + AH++SCEI +VTRHLC NK C+ P HL+FG S+N +D +K G+ EE V+ I
Sbjct: 80 VKRNCVTKRCINPEHLISQKLEMNFDIAWQRLLSKGKRDTTTSCLLWQGSIEKHSGYGIVSFNGRSDRVHVASYKIKVKKIVLEKFNNNNELLYVRHMCDNKHCYEPTHLELGTVSQNNYEDKIKSGTILRGSKNVWATINEETARKIKLSKYPMDHELYKNVPDRAKEFNVSESIVYAIDSGKSWGFIPDANGNTID---MRKNRKII----KIDTWTPEMFEVAKKYIESNYIKD------EVTG-CWIWKLGKNKAGYGKLTLYGKRKCAHIVSCEIKYGYHKPKDKVTRHLCDNKACVNPDHLEFGTQSQNNIDTIKSGNNKNYTTEEIVKEI 402
BLAST of mRNA_S-dermatodea_contig12643.1631.1 vs. uniprot
Match: A0A3G5AE31_9VIRU (Putative homing endonuclease n=1 Tax=Hyperionvirus sp. TaxID=2487770 RepID=A0A3G5AE31_9VIRU) HSP 1 Score: 108 bits (269), Expect = 6.440e-23 Identity = 100/347 (28.82%), Postives = 151/347 (43.52%), Query Frame = 1
Query: 7 RTIDGKCIGIR-----VQRYIWNL---THPDIFKGQTLSNSCSNHNCINPSHLEIVPKSLDDVWK----RMLEKTRRENECLLWTGSTNK-GYGQTTVYSKIMSAHRASYLIKTKGEPIPREIDGMTAHVRHLCGKSLCVNPDHLEIGTIVSNHQDKAVHGTSMVGERSHLAKITEEKATQIKTSKLCEEEDGFESQTER-AERF--GVSLVTVRNIDSGKTWCHVKDRFGNTTNNDRLRKRKRETYSANQKQVWGDKDFEAAGEILYKRISKSTTDKRCDIPGDCWNFTGCTS-HGYGQIQIMGKHRGAHVMSCEIATKRAIEPREV-TRHLCGNKLCIAPHHLQF 993
+ ID + + I+ Q ++W T +F SC+ CI+P H + DV+K R++E +++E EC L+TG K GYG T + +I AH + I G IP + VRH C C HLE+GT N DK GT++ G A +TEE +I SK E D ++T+ +E+F +S +V ID G TW H+ +K ++ Q + DK EA + + IS I +CW + G HGYGQ + + G+ +AT + P ++ RH C NK C + +Q
Sbjct: 38 KIIDNQPVRIKFRGKLAQPHLWQKIISTKTWVFNANRYKKSCTEKFCISPDHF-LSRDDPTDVYKLAYIRLMENSKQEGECRLFTGFCTKYGYGNTNLKKRITYAHILAMEIHLNGT-IPDD-----KFVRHKCKNKNCFAIGHLELGTHAENMSDKIRDGTNLAGVDHPNAILTEEMVLEIFNSK---ETDTVPNRTKFFSEKFKIDISSASVYKIDDGSTWSHITKI---------TKKPPKKLVKPELNQEFIDKHHEAMKDKVKNNIS---------INEECWLWKGAKDIHGYGQTRFLRIMFGSIHRFSLMATSQKFIPADLQVRHKCANKHCWSVKIVQL 356
BLAST of mRNA_S-dermatodea_contig12643.1631.1 vs. uniprot
Match: A0A4R8ER33_9ENTR (HNH endonuclease n=1 Tax=Buttiauxella sp. BIGb0552 TaxID=2485120 RepID=A0A4R8ER33_9ENTR) HSP 1 Score: 85.9 bits (211), Expect = 1.570e-16 Identity = 57/163 (34.97%), Postives = 82/163 (50.31%), Query Frame = 1
Query: 154 KSLDDVWKRMLEKTRRENECLLWTGST-NKGYGQTTVYSKIMSAHRASYLIKTKGEPIPREIDGMTAHVRHLCGKSLCVNPDHLEIGTIVSNHQDKAVHGTSMVGERSHLAKITEEKATQIKTSKLCEEEDGFESQTERAERFGVSLVTVRNIDSGKTWCHVK 639
KSL D R+L + EC +W S + GYGQ + K + A+RASY++ KGE DGM +RH C LC+NP+HL +G+ N QD GER+ K++E IK SKL S ++ A++FG+S + +G W +K
Sbjct: 12 KSLKD---RLLAGCVKTGECWVWNKSVASSGYGQIRLNYKNLRANRASYMV-FKGEIA----DGMV--IRHTCDNKLCINPEHLILGSCKQNSQDMVERDRQAKGERNGRCKLSESDVQAIKDSKL--------SYSQLAKQFGISKGHAHRVKNGVAWSFLK 156
BLAST of mRNA_S-dermatodea_contig12643.1631.1 vs. uniprot
Match: UPI0013777149 (HNH endonuclease n=1 Tax=Microvirga arsenatis TaxID=2692265 RepID=UPI0013777149) HSP 1 Score: 80.9 bits (198), Expect = 9.860e-15 Identity = 57/163 (34.97%), Postives = 79/163 (48.47%), Query Frame = 1
Query: 169 VWKRMLEKTRRENE---CLLWTGSTNKGYGQTTVYSKIMSAHRASYLIKTKGEPIPREIDGMTAHVRHLCGKSLCVNPDHLEIGTIVSNHQDKAVHGT-SMVGERSHLAKITEEKATQIKTSKLCEEEDGFESQTERA--ERFGVSLVTVRNIDSGKTWCHVK 639
+W R K R + C LWTGST KGYG+ ++AHR SY++ KG + R V H C LCVNPDHL +GT + N QD G G RS L TE+ I+ +++T +A +GV+ T+ I +G+ W H+K
Sbjct: 8 LWPRFQAKIDRSSSPCGCWLWTGSTAKGYGKIRYNGVYVTAHRVSYMLY-KGPILDR------LFVCHTCDTRLCVNPDHLFLGTNLENQQDMWSKGRYGFGGGRSVL---TEDDVRAIRA----------DTRTHKAIATAYGVASSTISMIKTGRNWAHIK 150
BLAST of mRNA_S-dermatodea_contig12643.1631.1 vs. uniprot
Match: A0A8F5A6F1_9CAUD (HNH endonuclease n=1 Tax=Salmonella phage vB_SalP_ABTNLsp11242 TaxID=2838911 RepID=A0A8F5A6F1_9CAUD) HSP 1 Score: 80.5 bits (197), Expect = 1.430e-14 Identity = 55/163 (33.74%), Postives = 83/163 (50.92%), Query Frame = 1
Query: 154 KSLDDVWKRMLEKTRRENECLLWTGST-NKGYGQTTVYSKIMSAHRASYLIKTKGEPIPREIDGMTAHVRHLCGKSLCVNPDHLEIGTIVSNHQDKAVHGTSMVGERSHLAKITEEKATQIKTSKLCEEEDGFESQTERAERFGVSLVTVRNIDSGKTWCHVK 639
KSL++ R+L + C +W S + GYGQ + K + A+RAS+++ KGE IP DGM +RH C LC+NPDHL +G+ N +D G ++ K++E+ +IK S L S ++ AE+FG+S I G W +K
Sbjct: 12 KSLEE---RLLAGCIKTEGCWIWRRSVASSGYGQIRLNYKNLRANRASFMV-FKGE-IP---DGMV--IRHTCDNKLCINPDHLILGSCKQNSEDMVSRDRQAKGIKNGRCKLSEDTVREIKKSTL--------SCSKTAEKFGISKSHAHKIMKGAAWSFIK 156
BLAST of mRNA_S-dermatodea_contig12643.1631.1 vs. uniprot
Match: A0A4P7C045_9GAMM (HNH endonuclease n=1 Tax=Nitrosococcus wardiae TaxID=1814290 RepID=A0A4P7C045_9GAMM) HSP 1 Score: 79.7 bits (195), Expect = 3.840e-14 Identity = 60/157 (38.22%), Postives = 79/157 (50.32%), Query Frame = 1
Query: 178 RMLEKTRR-ENECLLWTGSTNK-GYGQTTVYSKIMSAHRASYLIKTKGEPIPREIDGMTAHVRHLCGKSLCVNPDHLEIGTIVSNHQD--KAVHGTSMVGERSHLAKITEEKATQIKTSKLCEEEDGFESQTERAERFGVSLVTVRNIDSGKTWCHV 636
R LEKT R E CL+W G+ NK GYG +V K +A R +Y + PIP DGM V H C LC+ P+HL +GT N +D K GER+ AK+ E I++S G A ++GVS T++ I SGK W H+
Sbjct: 30 RFLEKTIRIETGCLMWIGAKNKNGYGCISVEGKTKTASRLAYELFIG--PIP---DGMI--VCHRCDFPLCIEPNHLFLGTDTDNRRDCKKKGRANGARGERNVKAKLKEHDVIVIRSSSA---RSGV-----LANKYGVSRSTIKRIRSGKIWRHI 171
BLAST of mRNA_S-dermatodea_contig12643.1631.1 vs. uniprot
Match: UPI00046F608A (HNH endonuclease n=1 Tax=Paenibacillus ehimensis TaxID=79264 RepID=UPI00046F608A) HSP 1 Score: 78.6 bits (192), Expect = 5.980e-14 Identity = 59/155 (38.06%), Postives = 77/155 (49.68%), Query Frame = 1
Query: 178 RMLEKTRRENECLLWTGSTN-KGYGQTTVYSKIMSAHRASYLIKTKGEPIPREIDGMTAHVRHLCGKSLCVNPDHLEIGTIVSNHQDKAVHGTSMVGERSHLAKITEEKATQIKTSKLCEEEDGFESQTERAERFGVSLVTVRNIDSGKTWCHVK 639
R + C +W GS N KGYGQ V AHR SY + KG IP+ GM V H C LCVNPDHL +GT N D VGER +K+T+EK +I++ + + G + A RFGVS V++I + W HV+
Sbjct: 6 RFTSNVDKSGACWVWKGSINGKGYGQLNVNGINEMAHRYSYQMH-KGT-IPK---GM--FVMHSCDNRLCVNPDHLIVGTHRDNMDDMINKKRQAVGERVKSSKLTKEKVKEIRSLR----KRGL-MYKDIAVRFGVSAYHVKDICRFRVWKHVE 148
BLAST of mRNA_S-dermatodea_contig12643.1631.1 vs. uniprot
Match: A0A352V7A0_9SPIR (HNH endonuclease n=1 Tax=Spirochaetia bacterium TaxID=2053615 RepID=A0A352V7A0_9SPIR) HSP 1 Score: 78.2 bits (191), Expect = 1.250e-13 Identity = 57/177 (32.20%), Postives = 87/177 (49.15%), Query Frame = 1
Query: 142 EIVPKSLDDVWKRMLE----KTRRENECLLWTGSTNKGYGQTTVYSKIMSAHRASYLIKTKGEPIPREIDGMTAHVRHLCGKSLCVNPDHLEIGTIVSNHQDKAVHGT---SMVGERSHLAKITEEKATQIKTSKLCEEEDGFESQTERAERFGVSLVTVRNIDSGKTWCHVKDRFG 651
E P+ +++ +R+ E + + C WT ST+KGYG + K AHR ++I T GE DG+ V H C LC+NPDHL +GT + N D G GE++ AK+T+ + IK +G ++T +E+F +S V+ I KTW H+ + G
Sbjct: 3 EFTPEWIEEARERIREHFQYEINKNTGCWEWTKSTSKGYGHLGIRGKFYQAHRLMWII-TNGEIK----DGL--FVCHKCDNRLCINPDHLFLGTNLDNINDAIEKGKWQHQPKGEKNGNAKLTKNQVLNIKHLVS----NGIPTKT-ISEKFNISQRHVQYIAKNKTWKHLINGVG 167
BLAST of mRNA_S-dermatodea_contig12643.1631.1 vs. uniprot
Match: A0A6M3KWD7_9ZZZZ (Putative homing endonuclease n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6M3KWD7_9ZZZZ) HSP 1 Score: 74.3 bits (181), Expect = 2.870e-12 Identity = 41/93 (44.09%), Postives = 53/93 (56.99%), Query Frame = 1
Query: 172 WKRMLEKTRRENECLLWTGSTNKGYGQTTVYSKIMSAHRASYLIKTKGEPIPREIDGMTAHVRHLCGKSLCVNPDHLEIGTIVSNHQDKAVHG 450
WKR+ KT N+C LW G T++GYG T S +S HR ++ K IP+ + A VRH CG LCVNP+HL+IG N +D A G
Sbjct: 26 WKRVDIKT--PNDCWLWKGPTDRGYGVTCDGSNRISTHRMAW--KLINGDIPKFVKTRKALVRHKCGNRLCVNPNHLDIGNYSDNGKDAAREG 114
BLAST of mRNA_S-dermatodea_contig12643.1631.1 vs. uniprot
Match: A0A6M1YN17_9BACT (HNHc domain-containing protein n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M1YN17_9BACT) HSP 1 Score: 74.3 bits (181), Expect = 6.850e-12 Identity = 50/158 (31.65%), Postives = 81/158 (51.27%), Query Frame = 1
Query: 154 KSLDDVWKRMLEKTRRENECLLWTGSTNKGYGQTTVYSKIMSAHRASYLIKTKGEPIPREIDGMTAHVRHLCGKSLCVNPDHLEIGTIVSNHQDKAVHGTSMVGERSHLAKITEEKATQIKTSKLCEEEDGFESQTERAERFGVSLVTVRNIDSGKTW 627
+ DDV+++ T+++ ECL+WTG+T+KGY + + K+ SAHR + + GEPIP +G V H C CVN HL + + N +D G G R+ AK +E+ I+ E +S ++ A+ G T+R I + +T+
Sbjct: 64 RDFDDVFEK---NTKKQGECLIWTGTTSKGYPKFKLQGKVYSAHRVVWE-QVFGEPIP---EGKC--VCHHCDNRACVNVGHLFVASRAQNSKDMIRKGRQAKGSRNGSAKFSEKDIISIRN------EPPTKSISDIAKERGAHNSTIRRILNKETY 206 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12643.1631.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig12643.1631.1 >prot_S-dermatodea_contig12643.1631.1 ID=prot_S-dermatodea_contig12643.1631.1|Name=mRNA_S-dermatodea_contig12643.1631.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=360bp MYRTIDGKCIGIRVQRYIWNLTHPDIFKGQTLSNSCSNHNCINPSHLEIVback to top mRNA from alignment at S-dermatodea_contig12643:5612..6691- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig12643.1631.1 ID=mRNA_S-dermatodea_contig12643.1631.1|Name=mRNA_S-dermatodea_contig12643.1631.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1080bp|location=Sequence derived from alignment at S-dermatodea_contig12643:5612..6691- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig12643:5612..6691- >mRNA_S-dermatodea_contig12643.1631.1 ID=mRNA_S-dermatodea_contig12643.1631.1|Name=mRNA_S-dermatodea_contig12643.1631.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2160bp|location=Sequence derived from alignment at S-dermatodea_contig12643:5612..6691- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |