mRNA_S-dermatodea_contig126.1601.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig126.1601.1
Unique NamemRNA_S-dermatodea_contig126.1601.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig126.1601.1 vs. uniprot
Match: D7FUW2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUW2_ECTSI)

HSP 1 Score: 455 bits (1170), Expect = 4.220e-159
Identity = 233/307 (75.90%), Postives = 259/307 (84.36%), Query Frame = 1
Query:    1 MHLIAGGVAGVVESACCHPLDTIKTRVQLTAGMMHRGGGSGGGATKTAARLVEKEGFFALYKGLSAVMAGIIPKMAVRFSSFETYKGWLGASDGGIKGLVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQFQPVLAGVGPVTSGDGAPVVKYRDALQTATVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQTFKTQLSAYLGTEELASWQHMILGGVSGGIGPCVNNPLDCVKTRLQKQVIIPGQAPKYDGFMSAISLIAREEGVRALWKGLAPRLLRIMPGQAITFMTYEYVSKRLPDSLWSGR 921
            MHL+AGGVAGVVES+CCHPLDT+KTR+QL        GGS  G  +TA+ ++ KEGF ALYKGLSAVM GI+PKMAVRF+SFETYK WLGAS  G KGLVFLAGLGSGVTEA++VVTPAEVCKIRMQAQF  +L         +     KYR+ LQTA VVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQ FKTQLS Y G+EELASWQHM+LGG+SGGIGPCVNNPLD VKTRLQKQV+IPGQAPKY GF+SAISLIA+EEGV+ALWKGL PRL+RIMPGQAITFMTYE+VSKRLP S  + +
Sbjct:   12 MHLVAGGVAGVVESSCCHPLDTVKTRMQLRIK-----GGSTKGPLRTASSIITKEGFLALYKGLSAVMMGIVPKMAVRFTSFETYKEWLGASPTGNKGLVFLAGLGSGVTEAIVVVTPAEVCKIRMQAQFHSLL-------DPEEMARRKYRNVLQTAVVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQMFKTQLSLYTGSEELASWQHMLLGGLSGGIGPCVNNPLDVVKTRLQKQVVIPGQAPKYGGFVSAISLIAKEEGVKALWKGLTPRLMRIMPGQAITFMTYEWVSKRLPASFTASK 306          
BLAST of mRNA_S-dermatodea_contig126.1601.1 vs. uniprot
Match: D8LI49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI49_ECTSI)

HSP 1 Score: 433 bits (1113), Expect = 1.250e-150
Identity = 227/306 (74.18%), Postives = 251/306 (82.03%), Query Frame = 1
Query:    1 MHLIAGGVAGVVESACCHPLDTIKTRVQLTAGMMHRGGGSGGGATKTAARLVEKEGFFALYKGLSAVMAGIIPKMAVRFSSFETYKGWLGASDGGIKGLVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQFQPVLAGVGPVTSGDGAPVVKYRDALQTATVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQTFKTQLSAYLGTEELASWQHMILGGVSGGIGPCVNNPLDCVKTRLQKQVIIPGQAPKYDGFMSAISLIAREEGVRALWKGLAPRLLRIMPGQAITFMTYEYVSKRLPDSLWSG 918
            +H   GG AGVVES+CCHPLDTIKTR QLT+                A RLV+ EG FALY+GLSAVMAGI+PKM+VRFSSFE YKGWLGA++G  KGLVFLAGLGSGVTEAV+VVTPAEVCKIRMQ+Q   V+A        DG+   KYRD LQTATVV REEGV ALYKGLAPTVLRQGCNQAVNFTCYQ FKT+LS  LGTEELA W HM+LGG+SGGIGPCVNNPLD  KTRLQ+QV+IPGQAPKY GF+SAISLIA+EEGV+ALWKGL PRL+RIMPGQAITFMTYE+VSKRLP SL +G
Sbjct:    4 LHGTYGGAAGVVESSCCHPLDTIKTRTQLTSLS----------PAIVAKRLVKNEGVFALYRGLSAVMAGIVPKMSVRFSSFELYKGWLGAAEGHSKGLVFLAGLGSGVTEAVMVVTPAEVCKIRMQSQSLQVIA--------DGSSG-KYRDVLQTATVVVREEGVRALYKGLAPTVLRQGCNQAVNFTCYQVFKTKLSDLLGTEELAPWHHMLLGGLSGGIGPCVNNPLDVSKTRLQQQVLIPGQAPKYGGFVSAISLIAKEEGVKALWKGLTPRLMRIMPGQAITFMTYEWVSKRLPASLGTG 290          
BLAST of mRNA_S-dermatodea_contig126.1601.1 vs. uniprot
Match: A0A6V1U9P6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U9P6_HETAK)

HSP 1 Score: 372 bits (954), Expect = 4.630e-126
Identity = 197/301 (65.45%), Postives = 224/301 (74.42%), Query Frame = 1
Query:    1 MHLIAGGVAGVVESACCHPLDTIKTRVQLTAGMMHRGGGSGGGATKTAARLVEKEGFFALYKGLSAVMAGIIPKMAVRFSSFETYKGWLGAS--DGGIKGLVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQFQPVLAGVGPVTSGDGAPVVKYRDALQTATVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQTFKTQLSAYLGTEELASWQHMILGGVSGGIGPCVNNPLDCVKTRLQKQVIIPGQAPKYDGFMSAISLIAREEGVRALWKGLAPRLLRIMPGQAITFMTYEYVSKRL 897
            MHLIAGG AG+VES CCHPLDTIKTR+QL A       GS  G  +TA R+V  EGFFALYKGL+AV AGIIPKM  RF+SFE YK +L  +  +   KG V LAGLGSGVTEA+LVVTPAEVCKIRMQ+Q+  ++      T        KYR+ LQTA V+ REEG GALYKG+ PT LRQGCNQAVNFTCYQ FK Q     G EELA WQHM++GG+SGG GP  NNPLD VKTRLQKQ + PGQ PKY G   A+ +IA+EEGV ALWKGL PRL+RIMPGQAITFMTYE+VSK +
Sbjct:   14 MHLIAGGSAGLVESTCCHPLDTIKTRMQLRATA-----GSTIGPIQTATRIVTNEGFFALYKGLTAVWAGIIPKMMTRFTSFEMYKDFLRKTPDENLSKGKVLLAGLGSGVTEAILVVTPAEVCKIRMQSQYHSMMDPAAVATR-------KYRNVLQTAVVIVREEGPGALYKGVVPTTLRQGCNQAVNFTCYQIFKEQWLKRSGREELAPWQHMLIGGLSGGFGPAANNPLDVVKTRLQKQRVEPGQRPKYTGLGQAVVVIAKEEGVLALWKGLTPRLMRIMPGQAITFMTYEFVSKHV 302          
BLAST of mRNA_S-dermatodea_contig126.1601.1 vs. uniprot
Match: A0A836CM83_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM83_9STRA)

HSP 1 Score: 368 bits (944), Expect = 1.940e-124
Identity = 190/299 (63.55%), Postives = 230/299 (76.92%), Query Frame = 1
Query:    1 MHLIAGGVAGVVESACCHPLDTIKTRVQLTAGMMHRGGGSGGGATKTAARLVEKEGFFALYKGLSAVMAGIIPKMAVRFSSFETYKGWLGASDGGIKGLVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQFQPVLAGVGPVTSGDGAPVVKYRDALQTATVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQTFKTQLSAYLGTEELASWQHMILGGVSGGIGPCVNNPLDCVKTRLQKQVIIPGQAPKYDGFMSAISLIAREEGVRALWKGLAPRLLRIMPGQAITFMTYEYVSKRL 897
            +HLIAGG AG VES+   PLDTIKTR+QL A      G S  G   TA R+++ EGFF+LYKGL+AVMAGI+PKMAVRFSSF+ +K WLG  DG  K  VFLAGLGSGVTEAV+VVTPAEVCKIRMQAQ+  +L         +     KYR+ +QTA ++ +EEG+GALYKG+ PT LRQGCNQAVNF+ YQ FKT+  A    +EL +WQHM++GG+SGG+GP VNNPLD VKTRLQ+QV+IPG+ PKY G    +++IA+EEGV ALWKGL PRLLRIMPGQAITF TYE+VSK++
Sbjct:   22 IHLIAGGAAGAVESSVLFPLDTIKTRMQLRAK-----GRSAYGPITTAQRIIKNEGFFSLYKGLTAVMAGIVPKMAVRFSSFDLFKTWLGCLDGKDKKRVFLAGLGSGVTEAVMVVTPAEVCKIRMQAQYHSML-------DPEQMARRKYRNVIQTAGLIVKEEGIGALYKGVVPTTLRQGCNQAVNFSFYQIFKTKWEAARDGKELIAWQHMLIGGLSGGMGPVVNNPLDVVKTRLQRQVVIPGEVPKYRGLGQGMAVIAKEEGVLALWKGLTPRLLRIMPGQAITFATYEFVSKKI 308          
BLAST of mRNA_S-dermatodea_contig126.1601.1 vs. uniprot
Match: A0A6U4GJ12_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4GJ12_9STRA)

HSP 1 Score: 358 bits (918), Expect = 1.400e-120
Identity = 189/312 (60.58%), Postives = 232/312 (74.36%), Query Frame = 1
Query:    4 HLIAGGVAGVVESACCHPLDTIKTRVQL---TAGMMHRGGGSGGGATKTAARLVEKEGFFALYKGLSAVMAGIIPKMAVRFSSFETYKGWLGAS-DGGIKGLVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQFQPVLAGVGPVTSGDGAPVVKYRDALQTATVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQTFKTQLSA-YLGTEELASWQHMILGGVSGGIGPCVNNPLDCVKTRLQKQVIIPGQAPKYDGFMSAISLIAREEGVRALWKGLAPRLLRIMPGQAITFMTYEYVSKRLPDSLWSGRT 924
            HL+ GG AG+VES CCHPLDTIKTR+QL   TAG   +G         T   +V++EGFF+LYKGL+AV+ GI+PKMAVRFSS+E Y+  L A  DG  +  VFLAGLGSGVTEA+LVVTPAEVCKIRMQ+Q+  +     P    +    VKYR+  QTA  + REEG+GALYKG+ PT+ RQGCNQAVNFT YQ+ K  +SA +    ELASWQH++LGG+SGG+GP  NNPLD VKTR+QKQVI+PG+ PKY G +S I +IAREEGV ALW+G+ PRL+RIMPGQAITFMTYE++ K L   + S +T
Sbjct:   18 HLVCGGAAGLVESFCCHPLDTIKTRMQLRVLTAGRARKG------PLLTGVGIVQREGFFSLYKGLTAVVTGIVPKMAVRFSSYEQYRIMLDAEGDGAPRARVFLAGLGSGVTEAILVVTPAEVCKIRMQSQYHSLK---DPALRFEE---VKYRNVFQTAYTIVREEGLGALYKGVGPTIARQGCNQAVNFTAYQSMKDWVSANFRDGGELASWQHLLLGGLSGGMGPLANNPLDVVKTRMQKQVILPGETPKYAGMISGIGVIAREEGVGALWRGITPRLMRIMPGQAITFMTYEFMQKNLWTMISSKKT 317          
BLAST of mRNA_S-dermatodea_contig126.1601.1 vs. uniprot
Match: W7U0T5_9STRA (Succinate fumarate mitochondrial transporter n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0T5_9STRA)

HSP 1 Score: 354 bits (908), Expect = 9.090e-119
Identity = 191/299 (63.88%), Postives = 221/299 (73.91%), Query Frame = 1
Query:    4 HLIAGGVAGVVESACCHPLDTIKTRVQLTAGMMHRGGGSGGGATKTAARLVEKEGFFALYKGLSAVMAGIIPKMAVRFSSFETYKGWLGASDGGIKGL-VFLAGLGSGVTEAVLVVTPAEVCKIRMQAQFQPVLAGVGPVTSGDGAPVVKYRDALQTATVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQTFKTQLSAYLGTEELASWQHMILGGVSGGIGPCVNNPLDCVKTRLQKQVIIPGQAPKYDGFMSAISLIAREEGVRALWKGLAPRLLRIMPGQAITFMTYEYVSKRL 897
            HLIAGG AG VES+ CHPLDTIKTR+QL      + GGS  G   TA R+V+KE F ALYKGL+AV  GI+PKMAVRFSSFE YK +L  +DG +  +  FLAGLGSGVTEAVLVVTPAEVCKIR+QAQF  +     PV   +     KYR+ LQTA VVAREEG+GALYKG+ PTV+RQG NQAVNFT YQ  KT        +EL  W+ M+ GG+SGG+GP VNNPLD VKTRLQKQ I+ GQ PKY G   AI +I  EEGV ALWKG+ PRL+RIMPGQAITFMTYE+VS+ +
Sbjct:   35 HLIAGGAAGFVESSICHPLDTIKTRMQL-----RQAGGSTHGLFMTAFRIVQKESFPALYKGLTAVYMGIVPKMAVRFSSFEAYKSYLAGADGKVSPVGTFLAGLGSGVTEAVLVVTPAEVCKIRLQAQFHSM---ADPVQLANR----KYRNVLQTAVVVAREEGIGALYKGVVPTVMRQGINQAVNFTTYQAVKTAWLERQQRKELLPWESMLFGGLSGGLGPLVNNPLDVVKTRLQKQRIVEGQLPKYRGIFQAIPVIVSEEGVLALWKGITPRLMRIMPGQAITFMTYEFVSRHM 321          
BLAST of mRNA_S-dermatodea_contig126.1601.1 vs. uniprot
Match: B7GCT1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GCT1_PHATC)

HSP 1 Score: 328 bits (842), Expect = 5.980e-109
Identity = 178/304 (58.55%), Postives = 219/304 (72.04%), Query Frame = 1
Query:    4 HLIAGGVAGVVESACCHPLDTIKTRVQL-TAGMMHRGGGSGGGATKTAARLVEKEGFFALYKGLSAVMAGIIPKMAVRFSSFETYKGWLGASDGGIKG-----LVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQFQPVLAGVGPVTSGDGAPVVKYRDALQTATVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQTFKTQLSAYLGTEELASWQHMILGGVSGGIGPCVNNPLDCVKTRLQKQVIIPGQAPKYDGFMSAISLIAREEGVRALWKGLAPRLLRIMPGQAITFMTYEYVSKRL 897
            HLIAGG AG+VES+ CHPLDTIKTR+QL  AG++    G  G    TA R+V++EG  ALYKGL+AV  GI+PKMA+RF SFE Y+ +L A  G         + F AGL SG+TEAVLVVTPAEVCKIRMQ+Q+  ++    P          KY + LQTA ++ +EEG GALYKG+ PT+LRQGCNQAVNFT Y   K Q+  + GT+ LASWQ +++GG+SGG+GP VNNPLD VKTRLQKQV+  G+  KY G   A  +IA+EEGV ALWKG+ PRL+RIMPGQAITFMTYE VS ++
Sbjct:   27 HLIAGGCAGLVESSVCHPLDTIKTRMQLPAAGVVQAPLGPIG----TARRIVQREGLLALYKGLTAVYTGIVPKMAIRFVSFEQYREFLTARLGNADKSNATQITFTAGLFSGLTEAVLVVTPAEVCKIRMQSQYHSMM---DPTAMQHR----KYTNVLQTAMLIVKEEGAGALYKGVVPTMLRQGCNQAVNFTAYSAIKQQVMQWQGTDSLASWQSLLIGGLSGGMGPVVNNPLDVVKTRLQKQVVAAGKPAKYTGLAQACVVIAKEEGVLALWKGITPRLMRIMPGQAITFMTYEAVSAQM 319          
BLAST of mRNA_S-dermatodea_contig126.1601.1 vs. uniprot
Match: A0A1Z5JX09_FISSO (Solute carrier family 25 (Mitochondrial citrate transporter), member 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JX09_FISSO)

HSP 1 Score: 328 bits (840), Expect = 4.640e-108
Identity = 188/360 (52.22%), Postives = 226/360 (62.78%), Query Frame = 1
Query:    4 HLIAGGVAGVVESACCHPLDTIKTRVQL-----------------------------------TAGMMHRGGGSGG------------------GATKTAARLVEKEGFFALYKGLSAVMAGIIPKMAVRFSSFETYKGWLG--ASDGGIK-GLV-FLAGLGSGVTEAVLVVTPAEVCKIRMQAQFQPVLAGVGPVTSGDGAPVVKYRDALQTATVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQTFKTQLSAYLGTEELASWQHMILGGVSGGIGPCVNNPLDCVKTRLQKQVIIPGQAPKYDGFMSAISLIAREEGVRALWKGLAPRLLRIMPGQAITFMTYEYVSKRLPDSLW 912
            HL+AGG AG+VES+ CHPLDTIKTR+QL                                   TAG +  G    G                  G   TA R+VE+EGFFALYKGL+AV  GIIPKMA+RF SFE Y+ W+G  A   G+  G+V F AGL SG+TEA+LVVTPAEVCKIRMQ+QF  ++               KY + +QTA ++ +EEG+GALYKG+ PT+LRQGCNQAVNFT Y   K ++ A  GT+ L SWQ +++GG+SGG+GP VNNPLD VKTRLQKQVI PG+ PKY G   A   I REEGV ALWKG+ PRLLRIMPGQAITFMTYE VS ++    W
Sbjct:   13 HLLAGGAAGLVESSVCHPLDTIKTRMQLRRQSATVEKVVVKMRDSMMEPALRLQHSLQDPVLRTAGGLEPGIRMSGPTKLAHVTMHPHTVQAPLGPIGTARRIVEREGFFALYKGLTAVWTGIIPKMAIRFVSFEQYREWMGPPAQQYGVSAGMVTFTAGLASGLTEAILVVTPAEVCKIRMQSQFHSMM-------DPSQLQKRKYTNVIQTAFLIVKEEGLGALYKGVIPTMLRQGCNQAVNFTAYNYIKREVMARQGTDSLDSWQSLLIGGLSGGMGPLVNNPLDVVKTRLQKQVITPGKTPKYTGLGQACLKIGREEGVLALWKGITPRLLRIMPGQAITFMTYEAVSAQMTKMGW 365          
BLAST of mRNA_S-dermatodea_contig126.1601.1 vs. uniprot
Match: A0A7S3L1V8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L1V8_9STRA)

HSP 1 Score: 318 bits (814), Expect = 6.460e-104
Identity = 179/371 (48.25%), Postives = 227/371 (61.19%), Query Frame = 1
Query:    1 MHLIAGGVAGVVESACCHPLDTIKTRVQLT------------------------------------------AGMMHRGG---GS------------------------GGGATKTAARLVEKEGFFALYKGLSAVMAGIIPKMAVRFSSFETYKGWLGASDGG-IKGLVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQFQPVLAGVGPVTSGDGAPVV--KYRDALQTATVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQTFKTQLSAYLGTEELASWQHMILGGVSGGIGPCVNNPLDCVKTRLQKQVIIPGQAPKYDGFMSAISLIAREEGVRALWKGLAPRLLRIMPGQAITFMTYEYVSKRL 897
            +HL+AGG AG VES+ CHPLDTIKTR+QL                                           AG +H  G   GS                        G G   TA R++++EGF ALYKGL+AV  GI+PKMA+RF SFE Y+ WL  + G    G+ F AGL SG+TEA+L+VTPAEVCKIRMQ+Q+  ++         D + +   KY + +QTA  + REEG+ ALYKG+ PT+LRQGCNQAVNFT Y   K ++ A+  T++L  WQ +++GG+SGG+GP VNNPLD VKTRLQKQ++  G+APKY G + A  LIA+EEGV ALWKG+ PRLLRIMPGQAITFMTYE+ S +L
Sbjct:   13 LHLVAGGCAGFVESSVCHPLDTIKTRMQLRRQEASVEQVVVRVKSSLVEPAMRLGHSLRDPAAFMPSAAVAGAGGVHEPGLHMGSTPSAARTETVVVKPVKAPKGLVKAGMGPIGTAHRIIQREGFMALYKGLTAVYTGIVPKMAIRFVSFEQYRDWLQVATGAKSSGVTFTAGLASGLTEAILIVTPAEVCKIRMQSQYHSMI---------DPSQMQHRKYTNVVQTAFTIVREEGISALYKGVVPTMLRQGCNQAVNFTAYSAIKQKVMAHQKTDKLEHWQSLVIGGLSGGMGPLVNNPLDVVKTRLQKQIVHQGKAPKYTGLLQACVLIAKEEGVLALWKGITPRLLRIMPGQAITFMTYEFCSAQL 374          
BLAST of mRNA_S-dermatodea_contig126.1601.1 vs. uniprot
Match: A0A7S2HH19_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HH19_9STRA)

HSP 1 Score: 312 bits (800), Expect = 1.860e-101
Identity = 182/386 (47.15%), Postives = 223/386 (57.77%), Query Frame = 1
Query:    4 HLIAGGVAGVVESACCHPLDTIKTRVQLT------------AGMMHRG-----------------------GGSGGGATK-----------------------------------------------TAARLVEKEGFFALYKGLSAVMAGIIPKMAVRFSSFETYKGWLGA------SDGGIKGLVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQFQPVLAGVGPVTSGDGAPVVKYRDALQTATVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQTFKTQLSAYLGTEELASWQHMILGGVSGGIGPCVNNPLDCVKTRLQKQVIIPGQAPKYDGFMSAISLIAREEGVRALWKGLAPRLLRIMPGQAITFMTYEYVSKRL 897
            HLIAGG AG+VES+CCHPLDTIKTR+QL             + ++  G                         SGGG  +                                               TA R++++EGFF+LYKGL+AV  GIIPKMA+RF SFE Y+  L +       +G      FLAGL SG+TEAVLVVTPAEVCKIRMQ+Q+  +L               KY + +QTA  + REEG+GALYKG+ PT++RQGCNQAVNF+ Y   K +L  Y G  EL  W+ ++LGGVSGG+GP VNNPLD VKTRLQKQV+ PG+  KY G M + +LIA+EEG  ALWKG+ PRLLRIMPGQAITFMTYE VS R+
Sbjct:   24 HLIAGGAAGLVESSCCHPLDTIKTRMQLRRQAATIEAVKARSSLLEPGRLSSWNEPKNLPTRELHPVVRGVASSGGGVHEPALHLHSSSAAMTVEAAXXXXXXXEQKVIVKPTPPRGTVTAPLGPIGTARRIIQREGFFSLYKGLTAVYTGIIPKMAIRFLSFEQYREHLHSLQGYSMKEGFAPSTTFLAGLASGLTEAVLVVTPAEVCKIRMQSQYHSLL-------DPQQMKHRKYTNVVQTAVTIVREEGIGALYKGVVPTMMRQGCNQAVNFSVYNAAKRKLLEYKGQGELEHWESLVLGGVSGGMGPLVNNPLDVVKTRLQKQVVTPGKPAKYTGLMQSCALIAKEEGYAALWKGITPRLLRIMPGQAITFMTYEAVSSRM 402          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig126.1601.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUW2_ECTSI4.220e-15975.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LI49_ECTSI1.250e-15074.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6V1U9P6_HETAK4.630e-12665.45Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A836CM83_9STRA1.940e-12463.55Mitochondrial carrier domain-containing protein n=... [more]
A0A6U4GJ12_9STRA1.400e-12060.58Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7U0T5_9STRA9.090e-11963.88Succinate fumarate mitochondrial transporter n=2 T... [more]
B7GCT1_PHATC5.980e-10958.55Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A1Z5JX09_FISSO4.640e-10852.22Solute carrier family 25 (Mitochondrial citrate tr... [more]
A0A7S3L1V8_9STRA6.460e-10448.25Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2HH19_9STRA1.860e-10147.15Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig126contigS-dermatodea_contig126:9320..12718 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score459.9
Seed ortholog evalue9.4e-127
Seed eggNOG ortholog2880.D7FUW2
Preferred nameSFC1
KEGG koko:K07964,ko:K15100
KEGG TC2.A.29.7
KEGG ReactionR07811
KEGG Pathwayko00531,ko01100,ko05205,map00531,map01100,map05205
KEGG ModuleM00078
GOsGO:0003674,GO:0005215,GO:0005310,GO:0005342,GO:0005469,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006839,GO:0006855,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015138,GO:0015141,GO:0015238,GO:0015291,GO:0015297,GO:0015318,GO:0015556,GO:0015711,GO:0015740,GO:0015741,GO:0015744,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0019866,GO:0022804,GO:0022857,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0034220,GO:0042221,GO:0042493,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071422,GO:0071702,GO:0098656,GO:1903825,GO:1905039
EggNOG free text desc.mitochondrial tricarboxylic acid transmembrane transport
EggNOG OGsKOG0756@1,KOG0756@2759
EC3.2.1.166
COG Functional cat.U
CAZyGH79
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00536,ko01000,ko02000
Hectar predicted targeting categoryother localisation
Exons4
Model size942
Cds size942
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig126.1601.1prot_S-dermatodea_contig126.1601.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig126 9320..12718 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924254.6324754-CDS-S-dermatodea_contig126:9319..95381622924254.6324754-CDS-S-dermatodea_contig126:9319..9538Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig126 9320..9538 -
1694079128.218871-CDS-S-dermatodea_contig126:9319..95381694079128.218871-CDS-S-dermatodea_contig126:9319..9538Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig126 9320..9538 -
1622924254.6441758-CDS-S-dermatodea_contig126:9858..100261622924254.6441758-CDS-S-dermatodea_contig126:9858..10026Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig126 9859..10026 -
1694079128.2410965-CDS-S-dermatodea_contig126:9858..100261694079128.2410965-CDS-S-dermatodea_contig126:9858..10026Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig126 9859..10026 -
1622924254.6538875-CDS-S-dermatodea_contig126:10519..107821622924254.6538875-CDS-S-dermatodea_contig126:10519..10782Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig126 10520..10782 -
1694079128.2486687-CDS-S-dermatodea_contig126:10519..107821694079128.2486687-CDS-S-dermatodea_contig126:10519..10782Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig126 10520..10782 -
1622924254.6657681-CDS-S-dermatodea_contig126:12426..127181622924254.6657681-CDS-S-dermatodea_contig126:12426..12718Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig126 12427..12718 -
1694079128.2617538-CDS-S-dermatodea_contig126:12426..127181694079128.2617538-CDS-S-dermatodea_contig126:12426..12718Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig126 12427..12718 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig126.1601.1

>prot_S-dermatodea_contig126.1601.1 ID=prot_S-dermatodea_contig126.1601.1|Name=mRNA_S-dermatodea_contig126.1601.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=314bp
MHLIAGGVAGVVESACCHPLDTIKTRVQLTAGMMHRGGGSGGGATKTAAR
LVEKEGFFALYKGLSAVMAGIIPKMAVRFSSFETYKGWLGASDGGIKGLV
FLAGLGSGVTEAVLVVTPAEVCKIRMQAQFQPVLAGVGPVTSGDGAPVVK
YRDALQTATVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQTFKTQLS
AYLGTEELASWQHMILGGVSGGIGPCVNNPLDCVKTRLQKQVIIPGQAPK
YDGFMSAISLIAREEGVRALWKGLAPRLLRIMPGQAITFMTYEYVSKRLP
DSLWSGRTPALSR*
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mRNA from alignment at S-dermatodea_contig126:9320..12718-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig126.1601.1 ID=mRNA_S-dermatodea_contig126.1601.1|Name=mRNA_S-dermatodea_contig126.1601.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3399bp|location=Sequence derived from alignment at S-dermatodea_contig126:9320..12718- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCACTTGATCGCGGGCGGCGTCGCCGGCGTCGTTGAGTCCGCCTGCTG CCACCCGCTGGATACGATCAAAACTCGCGTCCAGCTCACCGCGGGGATGA TGCATCGCGGCGGCGGCAGTGGCGGTGGAGCAACAAAGACTGCAGCCCGG CTTGTCGAGAAAGAGGGGTTCTTTGCTCTGTACAAGGGACTGAGCGCGGT TATGGCCGGTATCATCCCCAAGATGGCGGTTCGCTTCAGCTCGTTCGAGA CGTACAAGGGCTGGCTTGGTGCGAGCGACGGCGGCATCAAGGGTGAGAGG CTCTAGTGGTACAGTATAGCGTGGCGATTGGGCGTAGAAGGCGTGTGGTT TTTGTGCTGCACGCGCACGGCGGCACTCCAACCGCCATCGCTGCCAGCGG GCGTCTCCTTAGCGGGCGCAAGAAAGGCTCTCCCCGTTGCCAGGGAAGCG GTAGAGTGGTCATCATGCTGGCCTCGAGCAAAAAGGAGGACATATGTATA TATGTATACCGGTCGACATGTATGCTACGATACGCCCTGGAACACAAGAA AACATGTGATAATCTGTGTAGGAGAGGTAATGAATCGCCACAAACCATGA AGAATTCCTTCGCTCGGATCATTTAATCGGGTTGGCTAGTGAATAGAAGC AGGCGGCGGCTGACGCGTTGATCGATCGTAGTCGTAGTGTTGTACTTTCC TGCAAAAGTTCGTTGTGAATTCAAGACCTGGCACCAAAACATGAAAATTT TCATCCAAAGGATCAAGTCCGAGGGGGGCTGCTGCAGGCTTCTTGTAATA AATGTCCTGGGTGATTGTGAACATAAATTAATACTCTTACGGGGGTTAGG GTAAGGTTTGCGCCATAACCCACATCATCTCTCGAAAGAAGCGAGACGCC CTGGCTATGACGGACAGTCATCGGGACCGCCGAAGGACTGTTGGTGGTGC CCGAGGTCAGCTCTGGGTCTGGGTGGGTCATGCGCTTGCACTCTCGATGG TTCATGTGCGCGCGGAGAACGAACAGAGTGCATCGATGAAAATGGTGCGC CCTCTCTCGTGCGTGACCTCCGAACAGTTCAGCGAATTTGATTTCATAAT ATACTCTATGATCTGCTTCAGGGGGTTTTCTTCAGGCCATACATTAATGA CACCCTGAGATCCATTAGGAGATGGGGAAATGCACAATACCAAGAGAGAG TGGGCGCTGACTCCTGGGTCTAATGGTGTAACGCGCCCTTTTCTACGGCA ATTTGCGTCGTATGTGGCGGCTTATCATAAACAACCCCACGACAGCACAA GGATGCCGCTATCTGTTTCGCTAAAAAACGTAGATCAGATGTGGTTCGTC TCAATCCCTGACGTTGCCTTCCTTGTTCCTCAAACAACGTCGTTACGGCA AGTGTTCAATGTCACAGGCCGTGGCCGGCAAAACAAAACACGCCTCTGCT GCGTCAAAACCCATGCCTCAAATTCACACAATCAACTTCACCCTCATAAG CCTACTCTTAGCGTAACGATGAACTTCGAGTTGCGGTTCAGGGCGCCCGG GCCCGCCGCCTCCGCAGCTGCCGCCGCCGAAATCGTCGGTACCGCTCTGA GATAATGTGCTCTTCTTCCGAAGATGGGTTCTGTCCGACCGCCGCCATTC GCCTCTAATGTCTATGCCGTCTCTCTCAAGGCTGCTGGCCCCGCTTATGA CCAGATTCGAGTACATGGTTCAAACCCTGCAAATATCCCAAAACAGAAGC GTCGCCCGGAGCTGCTTCCCGGCATTCTCCTTTGTGTTATTTTTTACCCG TGTTTTCGGTCATCACGACCGCACCAAGTCAACGTGGGACCCAAAACCGC GAAGTCGCACTCCTCCTCCACTCCAACTCCACCCCCGGTTTCGCCTTCTT CGCCTGTTCCCTTTCCCTTGTGAACTTGACGCACAGGACTTGTGTTCCTG GCGGGCCTCGGTTCGGGCGTGACGGAGGCCGTCCTCGTGGTGACGCCCGC GGAGGTGTGCAAGATCCGAATGCAAGCGCAATTCCAGCCCGTCCTCGCCG GCGTCGGTCCTGTCACGTCCGGCGACGGCGCTCCTGTCGTCAAGTATCGC GACGCCTTGCAAACGGCAACCGTCGTGGCGAGGGAAGAGGGTGTGGGAGC GCTGTACAAGGGTCTGGCTCCGACGGTGCTTCGTCAGGGGTGCAACCAGG TGAGCGAACGGCCCAAAGCAAAGTGGCTTCATTTGACGTTCAACGGTTTG TGAACGGCTGTCTTGTTTTCTGTTCAAGCTTTCGGCCATCCCTTCCAGTC TTGTCCTTGCGATAAAAATAGGTGTGGTCACTGACCCTGTGTAGGATCGC GTGTCACAGAGGGCAGAAGGAATAACGCACGGCCCAAGCTTGTGGTGAGT TCGAACCAGTTGCGTCTACTGTCCGACGGATGCCCCACTACAAGAAATCA GCAGAGCTCCGCGGCGAGGGGTCCGCCCGTCAACGATCAAAGTCCTTTGT CGTGTTACTTGCATACATCGGTGCCCCCAAGGCGTTGTCACGATCCCCCC TGCATACGCTGAAATAATTTCAGGTGCACTGTAGCGGTGGACGCGAGAAT GTGGCCTAACCATCCTCGGACCAGGAGTGAAAAACATCCTCGCTCCCCGC GCACCCCATATTTGCCCGAACTATTTGGTTGTTGTCCCCCAGGCCGTGAA CTTTACGTGCTATCAGACGTTCAAGACGCAGCTCTCGGCATACCTTGGAA CGGAAGAGCTCGCGTCATGGCAGCACATGATTTTGGGGGGGGTTAGCGGC GGCATCGGGCCTTGCGTCAACAACCCACTTGACTGTGTCAAGACTCGCCT ACAGAAGCAGGTACGATACGGCAAGGGAAACACCACGATTCGCTTATAAT TGGTCCCTGTAGAGGTTTGGACCGCAGATACTGTTGGTTCGGCCCTCGCT CATGAGATTGGAGATAGGTCGCATTAAGGAAACTAACGGTCAATTTGGGG TCGAATCCTTAAATGTATATATCGTTTTCCTCTTTTCATCATGCTGAGCA AAGCACTACGAGAAGCGCCGCATCCAACAAAGGCAAAGTGACGCTGCATT GCCGTTGCCCCCCCTCAAGCCTATCCTTACCTTTCCTGCCCGCCTGCTGC GAAATGCCCATCATGGCGAAAACATTCAAGGTCATCATCCCAGGACAGGC GCCCAAGTACGACGGGTTCATGTCGGCCATCTCGCTGATCGCGCGGGAGG AGGGTGTGAGGGCTCTGTGGAAGGGCCTCGCCCCTCGCCTGCTGCGGATC ATGCCGGGTCAGGCCATCACGTTCATGACCTACGAATATGTTTCCAAGCG CCTCCCGGATTCCCTGTGGAGCGGGCGAACTCCGGCATTGTCTCGGTAA
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Coding sequence (CDS) from alignment at S-dermatodea_contig126:9320..12718-

>mRNA_S-dermatodea_contig126.1601.1 ID=mRNA_S-dermatodea_contig126.1601.1|Name=mRNA_S-dermatodea_contig126.1601.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1884bp|location=Sequence derived from alignment at S-dermatodea_contig126:9320..12718- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCACTTGATCGCGGGCGGCGTCGCCGGCGTCGTTGAGTCCGCCTGCTG
CCACCCGCTGGATACGATCAAAACTCGCGTCCAGCTCACCGCGGGGATGA
TGCATCGCGGCGGCGGCAGTGGCGGTGGAGCAACAAAGACTGCAGCCCGG
CTTGTCGAGAAAGAGGGGTTCTTTGCTCTGTACAAGGGACTGAGCGCGGT
TATGGCCGGTATCATCCCCAAGATGGCGGTTCGCTTCAGCTCGTTCGAGA
CGTACAAGGGCTGGCTTGGTGCGAGCGACGGCGGCATCAAGGATGCACTT
GATCGCGGGCGGCGTCGCCGGCGTCGTTGAGTCCGCCTGCTGCCACCCGC
TGGATACGATCAAAACTCGCGTCCAGCTCACCGCGGGGATGATGCATCGC
GGCGGCGGCAGTGGCGGTGGAGCAACAAAGACTGCAGCCCGGCTTGTCGA
GAAAGAGGGGTTCTTTGCTCTGTACAAGGGACTGAGCGCGGTTATGGCCG
GTATCATCCCCAAGATGGCGGTTCGCTTCAGCTCGTTCGAGACGTACAAG
GGCTGGCTTGGTGCGAGCGACGGCGGCATCAAGGGACTTGTGTTCCTGGC
GGGCCTCGGTTCGGGCGTGACGGAGGCCGTCCTCGTGGTGACGCCCGCGG
AGGTGTGCAAGATCCGAATGCAAGCGCAATTCCAGCCCGTCCTCGCCGGC
GTCGGTCCTGTCACGTCCGGCGACGGCGCTCCTGTCGTCAAGTATCGCGA
CGCCTTGCAAACGGCAACCGTCGTGGCGAGGGAAGAGGGTGTGGGAGCGC
TGTACAAGGGTCTGGCTCCGACGGTGCTTCGTCAGGGGTGCAACCAGGAC
TTGTGTTCCTGGCGGGCCTCGGTTCGGGCGTGACGGAGGCCGTCCTCGTG
GTGACGCCCGCGGAGGTGTGCAAGATCCGAATGCAAGCGCAATTCCAGCC
CGTCCTCGCCGGCGTCGGTCCTGTCACGTCCGGCGACGGCGCTCCTGTCG
TCAAGTATCGCGACGCCTTGCAAACGGCAACCGTCGTGGCGAGGGAAGAG
GGTGTGGGAGCGCTGTACAAGGGTCTGGCTCCGACGGTGCTTCGTCAGGG
GTGCAACCAGGCCGTGAACTTTACGTGCTATCAGACGTTCAAGACGCAGC
TCTCGGCATACCTTGGAACGGAAGAGCTCGCGTCATGGCAGCACATGATT
TTGGGGGGGGTTAGCGGCGGCATCGGGCCTTGCGTCAACAACCCACTTGA
CTGTGTCAAGACTCGCCTACAGAAGCAGGCCGTGAACTTTACGTGCTATC
AGACGTTCAAGACGCAGCTCTCGGCATACCTTGGAACGGAAGAGCTCGCG
TCATGGCAGCACATGATTTTGGGGGGGGTTAGCGGCGGCATCGGGCCTTG
CGTCAACAACCCACTTGACTGTGTCAAGACTCGCCTACAGAAGCAGGTCA
TCATCCCAGGACAGGCGCCCAAGTACGACGGGTTCATGTCGGCCATCTCG
CTGATCGCGCGGGAGGAGGGTGTGAGGGCTCTGTGGAAGGGCCTCGCCCC
TCGCCTGCTGCGGATCATGCCGGGTCAGGCCATCACGTTCATGACCTACG
AATATGTTTCCAAGCGCCTCCCGGATTCCCTGTGGAGCGGGCGAACTCCG
GCATTGTCTCGGTAAGTCATCATCCCAGGACAGGCGCCCAAGTACGACGG
GTTCATGTCGGCCATCTCGCTGATCGCGCGGGAGGAGGGTGTGAGGGCTC
TGTGGAAGGGCCTCGCCCCTCGCCTGCTGCGGATCATGCCGGGTCAGGCC
ATCACGTTCATGACCTACGAATATGTTTCCAAGCGCCTCCCGGATTCCCT
GTGGAGCGGGCGAACTCCGGCATTGTCTCGGTAA
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