mRNA_S-dermatodea_contig1256.1580.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig1256.1580.1
Unique NamemRNA_S-dermatodea_contig1256.1580.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig1256.1580.1 vs. uniprot
Match: A0A6H5KS00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS00_9PHAE)

HSP 1 Score: 202 bits (513), Expect = 2.170e-49
Identity = 201/546 (36.81%), Postives = 249/546 (45.60%), Query Frame = 1 
Query:  148 PRRAPHAARSRLDSAAEEIGELGDDVSAASGQGTGADGGVGNLDALDDLLRRDAGMTQASPLPIGADESEGGGPLPDDGFGALDDLLGLEEGPRLQATTPQSPPTVGDVDGGGSPVVDIDPYAKFDAPPTTDSLDDLLSQSIPSAPKSAPAAPA-------------------------FGVDDISSTGWLDDLLKLENDDLEGPADAAAGGGGVTSRVAGGKRSRSTNAALESLIDEVSKVPGDGSXXXXXXXXXXTTAVGKPVDSEIGSSSDSTRIPVPEDMAATAPAAIDDWMNDLLEENEAAGKSAQPGASSEMSPPWPS-----SSLDTDPWDFDGGAPARPASGRGGGGYD--------------DVITGSNQLEGWKSNM----EMPR-SNVMGRAGAGRGSGAAPG--GSERSGRGTQSSFGEXXXXXXXXXXXXXAEFSRSSDWGAGAAWEDDG--------------GLDDEWGTAGGAGGRRFDDTETAQRAVTADLKSLGKRGEWEDALRALVGARVRGIPVNQFMYNSAISAV 1590
            PRRA   A  RL +AAE    LG         G   DG  GNLDALD  LRR+AG TQ       A  +  G    DDGF ALDDLLG+E+ P      P+S           S  VDIDP+AK D+P  TDSLDDLLS+ +P+AP +   A A                          G   +S + WLDDLL L+N++LE           V+S                              XXXXXX    + A  K  D  +   +    +P+P    A   AA+DDW+NDLLEE+     + +    S+ + P+       +SL+ DPWDF          G   G +               DV+TGSNQLEGWK+N     + PR SNVMGR   G GS +  G  G   +  GT   +                   RSSDWG G AW+  G              G+++  G  G  G R  D  E AQRA  ADLK LG+RG+WEDA RALVGARVRG+PVN +MYNSAISAV
Sbjct:   69 PRRA---ALGRLSAAAEGNDGLG--------VGDDDDGWDGNLDALDAQLRREAGPTQQQQQGQAAALAAAGF---DDGFSALDDLLGVEDSPSASPRAPRS---------SRSNDVDIDPFAKLDSPVITDSLDDLLSE-LPAAPAAGNQAAAGRRPTAXXXXXXXXXXXXXXXXXXXSGTAAVSES-WLDDLLDLDNENLE-----------VSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGPRSAA--KVPDRPVTGDA----VPIPPSNPADTSAALDDWLNDLLEEDNKNKNNQERTKLSKPAAPFQQEQRLRASLEDDPWDF------AAKEGDSSGSFXXXXXXXXXXXXXXXDVVTGSNQLEGWKANTVSSADAPRRSNVMGRRARGTGSSSTSGSPGGGAAAEGTSRPW-------DPESGSEEGAGGRSSDWGTGDAWKSKGESGVSWWDKDGPGMGMEETTGRRG-QGKRELDPVEEAQRACAADLKKLGQRGQWEDATRALVGARVRGVPVNVYMYNSAISAV 558
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BLAST of mRNA_S-dermatodea_contig1256.1580.1 vs. uniprot
Match: D8LU53_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU53_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 1.050e-16
Identity = 55/98 (56.12%), Postives = 62/98 (63.27%), Query Frame = 1 
Query: 1339 RSSDWGAGAAWEDDG--------------GLDDEWGTAGGAGGRRFDDTETAQRAVTADLKSLGKRGEWEDALRALVGARVRGIPVNQFMYNSAISAV 1590
            RSSDWG G AW   G              G+++  G  G  G R  D  E AQRA  ADLK LG+RG+WEDA RALVGARVRG+PVN +MYNSAISAV
Sbjct:   44 RSSDWGTGDAWTSKGESGVSWWDKDGPGMGMEEATGRRG-QGKRELDPVEEAQRACAADLKKLGQRGQWEDATRALVGARVRGVPVNVYMYNSAISAV 140
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1256.1580.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KS00_9PHAE2.170e-4936.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LU53_ECTSI1.050e-1656.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1256contigS-dermatodea_contig1256:4978..13082 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score95.5
Seed ortholog evalue1.4e-16
Seed eggNOG ortholog2880.D8LU53
EggNOG free text desc.endonuclease activity
EggNOG OGsKOG4197@1,KOG4197@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionPentatricopeptide repeat
Ec32 orthologEc-16_000270.1
Exons8
Model size3785
Cds size2757
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924252.73327-UTR-S-dermatodea_contig1256:4977..60051622924252.73327-UTR-S-dermatodea_contig1256:4977..6005Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1256 4978..6005 -
1694079126.7887623-UTR-S-dermatodea_contig1256:4977..60051694079126.7887623-UTR-S-dermatodea_contig1256:4977..6005Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1256 4978..6005 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924252.7439125-CDS-S-dermatodea_contig1256:6005..62691622924252.7439125-CDS-S-dermatodea_contig1256:6005..6269Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1256 6006..6269 -
1694079126.8000517-CDS-S-dermatodea_contig1256:6005..62691694079126.8000517-CDS-S-dermatodea_contig1256:6005..6269Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1256 6006..6269 -
1622924252.7518413-CDS-S-dermatodea_contig1256:6705..69251622924252.7518413-CDS-S-dermatodea_contig1256:6705..6925Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1256 6706..6925 -
1694079126.807858-CDS-S-dermatodea_contig1256:6705..69251694079126.807858-CDS-S-dermatodea_contig1256:6705..6925Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1256 6706..6925 -
1622924252.7645547-CDS-S-dermatodea_contig1256:7950..80811622924252.7645547-CDS-S-dermatodea_contig1256:7950..8081Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1256 7951..8081 -
1694079126.8163188-CDS-S-dermatodea_contig1256:7950..80811694079126.8163188-CDS-S-dermatodea_contig1256:7950..8081Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1256 7951..8081 -
1622924252.777124-CDS-S-dermatodea_contig1256:8697..88321622924252.777124-CDS-S-dermatodea_contig1256:8697..8832Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1256 8698..8832 -
1694079126.8251255-CDS-S-dermatodea_contig1256:8697..88321694079126.8251255-CDS-S-dermatodea_contig1256:8697..8832Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1256 8698..8832 -
1622924252.7911317-CDS-S-dermatodea_contig1256:9559..98101622924252.7911317-CDS-S-dermatodea_contig1256:9559..9810Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1256 9560..9810 -
1694079126.834952-CDS-S-dermatodea_contig1256:9559..98101694079126.834952-CDS-S-dermatodea_contig1256:9559..9810Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1256 9560..9810 -
1622924252.8041186-CDS-S-dermatodea_contig1256:10608..107901622924252.8041186-CDS-S-dermatodea_contig1256:10608..10790Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1256 10609..10790 -
1694079126.8446827-CDS-S-dermatodea_contig1256:10608..107901694079126.8446827-CDS-S-dermatodea_contig1256:10608..10790Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1256 10609..10790 -
1622924252.8126762-CDS-S-dermatodea_contig1256:11394..127431622924252.8126762-CDS-S-dermatodea_contig1256:11394..12743Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1256 11395..12743 -
1694079126.8569415-CDS-S-dermatodea_contig1256:11394..127431694079126.8569415-CDS-S-dermatodea_contig1256:11394..12743Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1256 11395..12743 -
1622924252.824588-CDS-S-dermatodea_contig1256:12857..130821622924252.824588-CDS-S-dermatodea_contig1256:12857..13082Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1256 12858..13082 -
1694079126.8749604-CDS-S-dermatodea_contig1256:12857..130821694079126.8749604-CDS-S-dermatodea_contig1256:12857..13082Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1256 12858..13082 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1256.1580.1prot_S-dermatodea_contig1256.1580.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig1256 6006..13082 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig1256.1580.1

>prot_S-dermatodea_contig1256.1580.1 ID=prot_S-dermatodea_contig1256.1580.1|Name=mRNA_S-dermatodea_contig1256.1580.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=919bp
MTLWGLASSSLLLASARSFVLPPSLPQQALPSLATAALTRGRAVFGPLPP
RRAPHAARSRLDSAAEEIGELGDDVSAASGQGTGADGGVGNLDALDDLLR
RDAGMTQASPLPIGADESEGGGPLPDDGFGALDDLLGLEEGPRLQATTPQ
SPPTVGDVDGGGSPVVDIDPYAKFDAPPTTDSLDDLLSQSIPSAPKSAPA
APAFGVDDISSTGWLDDLLKLENDDLEGPADAAAGGGGVTSRVAGGKRSR
STNAALESLIDEVSKVPGDGSDGGDSGDRGDTTAVGKPVDSEIGSSSDST
RIPVPEDMAATAPAAIDDWMNDLLEENEAAGKSAQPGASSEMSPPWPSSS
LDTDPWDFDGGAPARPASGRGGGGYDDVITGSNQLEGWKSNMEMPRSNVM
GRAGAGRGSGAAPGGSERSGRGTQSSFGESGGRGGRGGRSGEAEFSRSSD
WGAGAAWEDDGGLDDEWGTAGGAGGRRFDDTETAQRAVTADLKSLGKRGE
WEDALRALVGARVRGIPVNQFMYNSAISAVAKCGRYKEALSMMEQMRKDD
IEFDVYTYSGAITACGKGGQARKALSLLDEMVKKYGLTPDMVCYGAAAQA
CADAGLSEEASGIMRRMNADEFVPDKAVYNSAITACGQNGEWEKALDILG
EMRAAGLRPDQHSYRFAMKACGSGGRWERALQLLSDMEEDSLTPEIPAFQ
AALDTLREAGQWEKALELISEMDELGVAPTEECFAAAIAACAEVGQWRAA
CDAVKTMRDLNLQPSVSTYNSVLKACVRGKNYSRALTTMNDMRVSGKRPE
QESWELLVEACTVCGRWECAVEVVRDMFAEEVYYDMEAIRTRLFECPVED
IRKEGLLIIAMEARSAVSMKRKKQNNIRMAAKIKAKYMPADSKAAPRRKR
AGKRSDGGVPSFADRNNE*
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mRNA from alignment at S-dermatodea_contig1256:4978..13082-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig1256.1580.1 ID=mRNA_S-dermatodea_contig1256.1580.1|Name=mRNA_S-dermatodea_contig1256.1580.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=8105bp|location=Sequence derived from alignment at S-dermatodea_contig1256:4978..13082- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGACTCTCTGGGGGCTGGCCTCCTCATCCCTACTGCTGGCTTCGGCCAG
GAGCTTTGTGCTACCGCCATCATTACCGCAGCAGGCACTGCCGTCCCTGG
CGACAGCAGCGCTCACGCGCGGCAGAGCTGTGTTCGGCCCTCTACCGCCG
CGCAGAGCACCGCATGCTGCGCGCAGTCGCCTCGACTCTGCAGCTGAAGA
AATTGGCGAGCTCGGTGACGACGTGGTCTCTGGTCAAGAGGTCCCTCGTC
GCTCTCGAGGGGATGGTGTGGATGCTGATGGAGAAGGGGCCCCGTTGGGC
GACCTTGACGCGCTGGATGATCTGCTGGGGTTGCACAAGAGCGCAGCCTC
GGGACAGGGGACCGGCGCGGACGGCGGTGTGGGCAATCTGGATGCTCTGG
ACGACCTCTTGCGGCGCGACGCGGGAATGACGCAGGCGTCTCCACTCCCC
ATTGGTGCTGACGAAAGCGAAGGAGGTGGCCCCCTCCCTGACGACGGATT
TGGGGCGCTGGACGATCTTCTCGGTTTGGAGGAAGGCCCCAGGCTGCAAG
CCACGACCCCACAGTCCCCGCCAACCGTCGGCGACGTCGACGGCGGCGGC
AGCCCTGTCGTCGACATTGATCCCTACGCTAAGTTCGACGCCCCGCCGAC
GACAGACTCGCTGGACGATTTGCTGAGCCAGAGCATTCCGTCGGCCCCGA
AGTCCGCGCCAGCCGCGCCAGCATTTGGTGTGGACGATATCTCCTCGACT
GGCTGGCTCGACGACCTGTTGAAGTTGGAAAACGACGACCTCGAAGGGCC
CGCCGATGCCGCCGCCGGCGGGGGCGGGGTCACGAGCAGGGTGGCCGGTG
GCAAGCGGAGTCGGAGCACGAACGCCGCGCTCGAATCCTTGATCGACGAG
GTGTCGAAGGTGCCCGGCGACGGGAGCGATGGCGGCGACAGCGGTGATCG
TGGTGACACAACAGCAGTTGGCAAACCTGTCGACAGCGAGATCGGCAGCA
GCAGCGACTCGACGAGAATCCCCGTCCCGGAGGACATGGCTGCGACGGCA
CCGGCGGCGATCGACGACTGGATGAACGATCTTCTCGAAGAGAACGAAGC
CGCGGGTAAGTCGGCGCAACCGGGTGCATCCTCGGAGATGTCACCACCCT
GGCCCAGCAGCAGCCTGGACACAGACCCTTGGGACTTCGATGGAGGCGCG
CCCGCTCGTCCCGCGTCCGGGCGAGGCGGCGGCGGCTACGACGACGTCAT
CACTGGCTCAAACCAACTGGAAGGCTGGAAGTCCAACATGGAAATGCCAA
GGTCCAACGTTATGGGACGGGCGGGGGCGGGGAGGGGAAGTGGCGCCGCC
CCCGGTGGTAGCGAGCGCAGCGGTAGAGGGACGCAAAGCAGCTTCGGAGA
AAGCGGAGGCCGAGGGGGGCGGGGGGGCAGGAGCGGCGAGGCCGAGTTCT
CGCGTTCGAGCGACTGGGGGGCGGGGGCAGCGTGGGAAGACGACGGCGGG
CTGGACGACGAGTGGGGGACGGCGGGCGGGGCGGGGGGGCGACGCTTTGA
CGATACGGAAACGGCGCAGAGAGCCGTGACTGCGGATCTGAAATCGTTAG
GAAAAAGGGGGGAGTGGGAGGACGCGCTTCGGGCGCTGGTTGGAGCGAGG
GTTCGCGGCATACCCGTGAACCAGTTCATGTACAACAGGTGGGTGGGCTT
ACTGCCAGAGCGAACTGCGTTTCATTTTGGCCTCTGTAGGTTTGACAGCT
TCTGGGCCCACGCCGCCTGACTCAAGAAGTGAGGCCTTGGAGGCTTAACG
TAACCGCTGGGAATACCTTTTAAATGAAATATGACACTACTCGGGGCATG
CGTTTTGCCTTTTCCCCACCATGTGTGTGGTGCCAGTTGTTGTAGTACGG
CATTCTCTTACCATGACGGCGAAGTGCATATAACTAACCCTGGATACCAG
GCCCCTCGCGCTCGCGAGGGCGCGAGGATATGGGAAAAGATAGTGACCCA
AGCCGAGCGAACGAGGGTGCTCCAGGTAGCATTAGCAGGGCAAGAAACGT
GTGAACTATATATACTGTTAAGCGCAGTTCGCGTGCCCCCTCGTTAGCAT
CCGCTAGCTGGATGTTTCGGCCGAGAAAATGATAGCTATTGGGGGCATGG
TTTTCCAGCGCCGATGCCCTCCCCACGAACGAGTGCGATAGGGTCGGTTT
TACCGCCTATCCGCTTCACGTACACAGTACAATGCCGTAACCGCAACTTA
GTTCGCCGCATGCAACTGTCGTTCCCCGCCTGTCGGACACAGTGCGATAA
GCGCGGTGGCCAAGTGCGGCAGGTACAAGGAGGCCCTCTCGATGATGGAG
CAGATGCGGAAGGACGACATCGAATTTGACGTCTACACCTACAGCGGCGC
GATCACGGCGTGCGGGAAAGGGGGACAGGCGCGGAAAGCGCTGTCGCTGT
TGGACGAGATGGTCAAGAAGTACGGTGAGACGCACTGCACCGCGCTCGAC
GAAACCGTTAACGAACGTGGTGGTTGGCCGCCCTAGTTTTGTTGTTCTTG
TTGGTCTACTTTGCGTACGAGGAGAGGTTGATGATTTGATACCGTCCCCG
ACTGTAATTCGCGATGTGTGACGGTTGCGTCTACCACATTCGAGGGGGTT
GAAATAGAGATAAGTGCACTTGCCAGAGTTGATGAATGGGTGGAATGGTG
GTCCTGAACCCTCGTGTTTGGGGCGTAATTTAGAGAGAGGCGTTTCTTGT
GGGAGCGTGCCCTGGCGTGTTTGGTTGATAACACGTCGCGGTAGCTGTGA
CGGTAACAGCTGCTGTCGGAAATTTGCTGCATGACCAGGCTACAGCACCT
GTATGGTTTTCATGCGTGCCGTGCTGTTGTTGTGAGCAAAGAACGCGGCA
AACCGTATCCCATGCCTGTTGTTCTGGTTTCGTCGTCTGGGGCAATCACC
TCCCAGTGTTGATCACAATCCTCTTTTGTGCTACCGTGAGGTCATCTTGT
CGTTATGAATTGCGATTGCCATCGCGGGCAGAGTAAGGTGCACCCACGCC
AGTTGTAACACACCGCTCGAATGTTTGAAGATGTTTCCGTATCACTCACT
ATTATGAGGCCGAGGCTGTTAAAACCCATAAGCGACGAATGCCCCGGTAG
CGGCGTTGGGGGTTTGTGTCCCTCTTACCAACCGCATGCGCGGACCTCGA
AAGTACCCCTTTAGATGGTAACACTGCCTCCCCCCCCCCCCCCCCCCCCT
TTCTCCCAACTACTTGGCTCAGGCCTTACCCCAGACATGGTTTGCTACGG
AGCAGCCGCGCAAGCGTGCGCGGACGCGGGACTGTCGGAGGAAGCGTCTG
GCATCATGCGCCGAATGAACGCCGACGAATTCGTACCGGACAAGGCGGTC
TACAACTCGGCCATCACTGCATGCGGGCAGAATGGGGAGTGGGAAAAGGC
GCTGGACATCCTGGGGGAGATGAGGGCCGCGGGGCTAAGGCCGGACCAGC
ACAGCTACCGCTTCGCCATGAAGGTGTCAGAAATTGGGTCCGCTGGAGTT
TCGTGTCAACGTAATCGACCAAACGGTATTTACGTGCGAATTTTCGGACA
AAATCGTAGCGGCTGCTGTTCAGTACCGGTCATGTTTTGTGTTGAAGAGC
GAGGAGGGTGGAATCAAAGCCCACAGCAGTGCCGAGGTGCGCCTTGCTGT
GGTATCCTCCGCTCGCTGTGGCTTCACTTGTCCTCTGCGTGACATTTGCG
TGGTTGGCAAGGGTTTGCTTAATACCAAGCGTTGGCGTAGATGCGCGAGG
TTTCCCGTTGGGGTCACACACAATTCCTCGTAACCAACTAGGCAAGTCTT
GTAGGTACGGAGTGAGGCGATAAGCTCATGGCGACGGCAATATTTGATGG
CCATGAAGAGCGGCATCTGCGTGCTCTTCGTGGCGTATTTCTCTTGGCCA
TCCCCTCTGACGATGGCGAGAGCCCCCTCTCAATGTTTTGTCAGGCTTAC
TTGTAAATCGCAGCTTCACACAGATACCCTAGAGCTACGCATACCGTCGA
AAACATATTGTGTTGTTGAAATTTGTGTCGCTTGCTGCTGCATAGCGCCC
TTCGCCTTGTTTGAGGCCTCCCAGCTGGGCTTCGTAACTCCTCTACCAGC
TCTGCCAGCAAGATCCTTCTTTTTGTGGCAGTCCAATAAAGTGTATCGCT
TCACTCTACGCAACAATCCAACGTGCTCGTTGTAATCCCCCGCGTCGCAG
GCGTGTGGCAGTGGGGGTCGATGGGAGCGAGCCTTACAGCTTCTGTCCGA
TATGGAGGAGGATAGCCTCACGCCAGAGATACCGGCGTTTCAGGCGGCTC
TGGACACCCTTAGGGAGGCCGGCCAATGGGAAAAGGCAAGCAATGGGAGG
GCGTTGTTTTGACTGGGTCGGGAAACGCTTTGTTTTCCGGTTTGTGAGGG
ACTGTGTTGTGTGCCAAGACTTGCATTATCTGGCGTTGCCTGAGCATGAG
GAGGGGCTACAGTAGTGACTGCAGGGCGGTATGGTAGGGGGTTCTTGTTT
GAACGCGACACGTCGCTGTGCCGGACTTGGCAGAATGATATGTAGGTGCT
ATTGACTACCGGTGTGGTGGTGGTACCGCCTGCGAATGCCCCCCCCACAC
ACTTAGCGCCAAGCACGACAAGTGCTGTTACGGAAAATCATGAAGGCCAA
GTCCGTTTTCGTCGGCAAGTATCGATTTCACCGCCAACAAATTTTGCCGA
AATACAGAAAAGAAAAGAAAAGAGGGGGGGGAAAGCGAGACTTATCAACC
CGCAACGGCCTTCTCGCGTCGTGGAATTGCACCCTTATTTGTGTAGAACC
TTGTTTGTGTGGAACCTTGTTTGTGTAGAACCCAAAAGGATTTCGAAGGT
GCTGTCCGAGGCATCACAACACCGAAACGCCCCAACACCCCAAGTCGTGC
CCTTACTGTTACGACTGACGTTCGCCGCCTTTCGCAATGGTCACCGTGCA
GGCCTTGGAGCTGATCTCCGAGATGGATGAGTTGGGGGTGGCGCCGACAG
AGGAGTGCTTCGCTGCGGCTATCGCGGCGTGCGCGGAGGTCGGCCAGTGG
AGAGCGGCGTGCGATGCCGTCAAGACCATGAGGTGGGCGCCATGGTTGGG
GAGCTGGTGTTGTCCATCTGTCGCTTGCCTTTGCTCTGCCGAGCGTGCGC
TACCGATGTCAAGCTGAAGCGGCGGACCTGTTGTACGATTGTAAGCGTCA
GGCTATTCGCGCCGCAAAGAACATCGTTTAGCTCTCTGCTGTCGGTGTCG
TACCTGTTTGGATTTTCTTGCTCTTTTAGTTTGTCTAATGACTGGCTGAG
CTTCCTGAGCCGAGGGAATACTGTAGTATCAAGCGATTGAAGTGGGACTC
GAAAGGATAGGAGGTTTGTCGTGAACCTTGTTCTGCACGAGATCGATGCC
CCGAGTGTGGCGCCCAAGCGATGGCGGTCCAAAGCGAGAGGTGGAAGTCG
CCGGGTTCTGGCAACCGAACCGAATGTAGCATGACGGCGCCGTGCCGATA
CTGTTTTTTATATATTTCTCTGAGTGGGCAAGCGGTCACATGACTCGGGA
TACTGCGGAGGTGACCGCACGAGCTGAGTTGAGCTTGTTTTGTTATCTAC
CGGTCAACATTGAGATCTCCGGCAGCCCTCCAGAGGGTGGGATCTTGATT
CGTGCCAGTGTGCAGTCGGGAATTTTGTGTTCATGGGATATTGGGCTCCT
TCTTTCTTCTCTTTTTGTTATTGCAGCGGGGCTGCCGTTTCTTTTTTCCC
ATCCTTCGTCTTGTAGAGACCACATAAAACGATCAGCAAGGATTCATGGG
TCTGGATACGATATTACTTTGATACGACGAAGAACAACGCCAACAGCACA
CGTGACCTGGTGCCGTCTACTTACAGTCGAGGCTTTTTGCGTCTGTTTTG
TTTCCCAGCTTCTCCCTGGTGCCACTTGCCGGGTCTAACTGCCGCACGTG
TGCGGAGAGAAACCATGCCCCGTCGTGTTTGCGGCTTTATTCCCGAGCTC
CTGACGCCGCCCCGCTGTGCCACGGGCACAACTCAACCAGCCAAGGAAGC
AGATACTACTAACGAGCATACCACGTCCCCCATGCCACGTTGTCTTTTCG
CCATCAGGGACCTTAACCTGCAGCCGTCAGTGTCGACTTACAACTCGGTG
CTGAAGGCGTGCGTGAGGGGGAAGAACTACTCAAGGGCGTTGACGACCAT
GAACGACATGAGGGTCTCAGGAAAGCGACCGGAGCAGGAGTCGTGGGAGT
TGCTCGTGGAGGCGTGCACCGTGTGCGGGAGGTGGGAGTGCGCCGTGGAG
GTGGTGCGGGACATGTTCGCGGAGGAGGTGAGAGAGATGCAACACGCCTC
TTTTGAAATGAAACCTCGTTTGCGCCGAAACCCCTCTTGCTACGGAAATC
AAGTAAGTAGTGTATTTCGAGATGGACTACTGTAACTGTATGCCTTTCGA
TTTTTGATACGTAACGGGGCTTCTGGGCGCGAAGCGGAAATCTCGGAACA
GTTTGGTCGCAGGGGAAGCTCTTTTCATCTCGCCGTTGCATGCGGTGGGC
AGTTATCGCGGTTCAAACGATCATGGCAGGTATAATAGGCAGATTCCAAC
ACGGCGCACACGGGGCGTGTGAACTTTGCGGAAGTTGTGATGCCGCCCGC
GCCCATGGCCGGGCGAGCTTGTGTGGAGGTGCAACTGCAAGCAGTCAAGT
CTGCCTCACGGCAATCTTCAAACCCGTACTCCCGCCGCTCTTCTCGCTAA
TTCCCCCCGGCAGGTTTACTACGATATGGAGGCCATCCGTACGCGGTTAT
TCGAATGCCCGGTAGAGGATATTCGCAAGGAGGGGTTGTTGATTATCGCG
ATGGAGGCGAGGAGCGCTGTTAGCATGAAACGAAAAAAGCAGAATAACAT
TCGAATGGCGGCGAAGATCAAGGCCAAGTACATGCCGGCGGACAGCAAGG
CAGCGCCAAGAAGAAAACGGGCGGGAAAACGATCCGACGGCGGCGTGCCG
TCGTTTGCCGATAGGAATAACGAGTAATTGGTTGGGTTTCTTACACTTTT
CCAAGATACATCGGGTAGGGCCTTGCACGATTTTGATTGGCTATGTGTTG
CCGCGTGGCGGGCGAGGCGTGTATCGCCTTGACTTTTGTACTGATCATGG
ACGATATTTACGGAGGTTGGGGGCTTTTTAGCGTCTCGCAGTACAGGTGC
TATCCGCAGGGTTTACTCTAGAGCCGCTCGAGAGGACTGCAGTACAGTGG
TGCATTAGACAAGCCTAAGCGTCCACTGCTGTCACCAAGTCTCGTCGTGG
AGTTGCCGTTTGGCATTGTAGTGCTCTTGTTTGGATTGAGGCACTTGTGC
ATCCTTTTGAGATTCTTAAGTTCGGATTTACCGCATGCCAAAGCTCTTTC
GTATTCGTTCGTGTCCTCTGACTGAATGAAGTTGTTGCTCTGCTCCGAAT
ACAACTCTTCATCCGCGTTCGGTGACACATTTACGAAAATCACCGGTAAA
TATTGTCATCTATAATGTGGGGCGCCGGACAGGAGAAGCCGTCCTGAGTC
GGATCTTTCAACACTCTTGCCATATCGCGTCGCGTGCCCCAGAGAGGCGG
CGGTCGGCGGTAAAAAGAATGTCGAGGTGGCTCGTCGGTTGTTGCGTCGA
CCAGGCCTGCTTGAGATGTGCCTCCACGCGACATAAAAGGCACCTGTGGG
TATGGTAACGACGGTCGTCTCGTCTCGTCACCCGCTTATTCTTGTTACGC
GCGCTTGTCCGTATACCCTGTTGGCCCTGCGCGTTTTCGGGGCCATCTGC
TGTGTGCTCGCAACGAGTAATACAAAGATCGGGGGGGGTACTTGTATGAT
AAGAGAGTCGACTTTTGTCTGTCGCGCAGGAGTTATTTAGGGTCGTTTCT
ATTCGCCCTTCGTGTTTTCGGAGAGAGCCAGTGCCCTGCTGCGAGAACCG
ACTTCGATGGATCCAAACGAAAACCACTGAGAGGTACATCCATTTTTCGT
GAAATGAACATCCCTGCGAACAAACCGCGGGCGCTCGTGTGTCATTTCAC
TCAGG
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Coding sequence (CDS) from alignment at S-dermatodea_contig1256:4978..13082-

>mRNA_S-dermatodea_contig1256.1580.1 ID=mRNA_S-dermatodea_contig1256.1580.1|Name=mRNA_S-dermatodea_contig1256.1580.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=5514bp|location=Sequence derived from alignment at S-dermatodea_contig1256:4978..13082- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGACTCTCTGGGGGCTGGCCTCCTCATCCCTACTGCTGGCTTCGGCCAG
GAGCTTTGTGCTACCGCCATCATTACCGCAGCAGGCACTGCCGTCCCTGG
CGACAGCAGCGCTCACGCGCGGCAGAGCTGTGTTCGGCCCTCTACCGCCG
CGCAGAGCACCGCATGCTGCGCGCAGTCGCCTCGACTCTGCAGCTGAAGA
AATTGGCGAGCTCGGTGACGACGTGATGACTCTCTGGGGGCTGGCCTCCT
CATCCCTACTGCTGGCTTCGGCCAGGAGCTTTGTGCTACCGCCATCATTA
CCGCAGCAGGCACTGCCGTCCCTGGCGACAGCAGCGCTCACGCGCGGCAG
AGCTGTGTTCGGCCCTCTACCGCCGCGCAGAGCACCGCATGCTGCGCGCA
GTCGCCTCGACTCTGCAGCTGAAGAAATTGGCGAGCTCGGTGACGACGTG
AGCGCAGCCTCGGGACAGGGGACCGGCGCGGACGGCGGTGTGGGCAATCT
GGATGCTCTGGACGACCTCTTGCGGCGCGACGCGGGAATGACGCAGGCGT
CTCCACTCCCCATTGGTGCTGACGAAAGCGAAGGAGGTGGCCCCCTCCCT
GACGACGGATTTGGGGCGCTGGACGATCTTCTCGGTTTGGAGGAAGGCCC
CAGGCTGCAAGCCACGACCCCACAGTCCCCGCCAACCGTCGGCGACGTCG
ACGGCGGCGGCAGCCCTGTCGTCGACATTGATCCCTACGCTAAGTTCGAC
GCCCCGCCGACGACAGACTCGCTGGACGATTTGCTGAGCCAGAGCATTCC
GTCGGCCCCGAAGTCCGCGCCAGCCGCGCCAGCATTTGGTGTGGACGATA
TCTCCTCGACTGGCTGGCTCGACGACCTGTTGAAGTTGGAAAACGACGAC
CTCGAAGGGCCCGCCGATGCCGCCGCCGGCGGGGGCGGGGTCACGAGCAG
GGTGGCCGGTGGCAAGCGGAGTCGGAGCACGAACGCCGCGCTCGAATCCT
TGATCGACGAGGTGTCGAAGGTGCCCGGCGACGGGAGCGATGGCGGCGAC
AGCGGTGATCGTGGTGACACAACAGCAGTTGGCAAACCTGTCGACAGCGA
GATCGGCAGCAGCAGCGACTCGACGAGAATCCCCGTCCCGGAGGACATGG
CTGCGACGGCACCGGCGGCGATCGACGACTGGATGAACGATCTTCTCGAA
GAGAACGAAGCCGCGGGTAAGTCGGCGCAACCGGGTGCATCCTCGGAGAT
GTCACCACCCTGGCCCAGCAGCAGCCTGGACACAGACCCTTGGGACTTCG
ATGGAGGCGCGCCCGCTCGTCCCGCGTCCGGGCGAGGCGGCGGCGGCTAC
GACGACGTCATCACTGGCTCAAACCAACTGGAAGGCTGGAAGTCCAACAT
GGAAATGCCAAGGTCCAACGTTATGGGACGGGCGGGGGCGGGGAGGGGAA
GTGGCGCCGCCCCCGGTGGTAGCGAGCGCAGCGGTAGAGGGACGCAAAGC
AGCTTCGGAGAAAGCGGAGGCCGAGGGGGGCGGGGGGGCAGGAGCGGCGA
GGCCGAGTTCTCGCGTTCGAGCGACTGGGGGGCGGGGGCAGCGTGGGAAG
ACGACGGCGGGCTGGACGACGAGTGGGGGACGGCGGGCGGGGCGGGGGGG
CGACGCTTTGACGATACGGAAACGGCGCAGAGAGCCGTGACTGCGGATCT
GAAATCGTTAGGAAAAAGGGGGGAGTGGGAGGACGCGCTTCGGGCGCTGG
TTGGAGCGAGGGTTCGCGGCATACCCGTGAACCAGTTCATGTACAACAGA
GCGCAGCCTCGGGACAGGGGACCGGCGCGGACGGCGGTGTGGGCAATCTG
GATGCTCTGGACGACCTCTTGCGGCGCGACGCGGGAATGACGCAGGCGTC
TCCACTCCCCATTGGTGCTGACGAAAGCGAAGGAGGTGGCCCCCTCCCTG
ACGACGGATTTGGGGCGCTGGACGATCTTCTCGGTTTGGAGGAAGGCCCC
AGGCTGCAAGCCACGACCCCACAGTCCCCGCCAACCGTCGGCGACGTCGA
CGGCGGCGGCAGCCCTGTCGTCGACATTGATCCCTACGCTAAGTTCGACG
CCCCGCCGACGACAGACTCGCTGGACGATTTGCTGAGCCAGAGCATTCCG
TCGGCCCCGAAGTCCGCGCCAGCCGCGCCAGCATTTGGTGTGGACGATAT
CTCCTCGACTGGCTGGCTCGACGACCTGTTGAAGTTGGAAAACGACGACC
TCGAAGGGCCCGCCGATGCCGCCGCCGGCGGGGGCGGGGTCACGAGCAGG
GTGGCCGGTGGCAAGCGGAGTCGGAGCACGAACGCCGCGCTCGAATCCTT
GATCGACGAGGTGTCGAAGGTGCCCGGCGACGGGAGCGATGGCGGCGACA
GCGGTGATCGTGGTGACACAACAGCAGTTGGCAAACCTGTCGACAGCGAG
ATCGGCAGCAGCAGCGACTCGACGAGAATCCCCGTCCCGGAGGACATGGC
TGCGACGGCACCGGCGGCGATCGACGACTGGATGAACGATCTTCTCGAAG
AGAACGAAGCCGCGGGTAAGTCGGCGCAACCGGGTGCATCCTCGGAGATG
TCACCACCCTGGCCCAGCAGCAGCCTGGACACAGACCCTTGGGACTTCGA
TGGAGGCGCGCCCGCTCGTCCCGCGTCCGGGCGAGGCGGCGGCGGCTACG
ACGACGTCATCACTGGCTCAAACCAACTGGAAGGCTGGAAGTCCAACATG
GAAATGCCAAGGTCCAACGTTATGGGACGGGCGGGGGCGGGGAGGGGAAG
TGGCGCCGCCCCCGGTGGTAGCGAGCGCAGCGGTAGAGGGACGCAAAGCA
GCTTCGGAGAAAGCGGAGGCCGAGGGGGGCGGGGGGGCAGGAGCGGCGAG
GCCGAGTTCTCGCGTTCGAGCGACTGGGGGGCGGGGGCAGCGTGGGAAGA
CGACGGCGGGCTGGACGACGAGTGGGGGACGGCGGGCGGGGCGGGGGGGC
GACGCTTTGACGATACGGAAACGGCGCAGAGAGCCGTGACTGCGGATCTG
AAATCGTTAGGAAAAAGGGGGGAGTGGGAGGACGCGCTTCGGGCGCTGGT
TGGAGCGAGGGTTCGCGGCATACCCGTGAACCAGTTCATGTACAACAGTG
CGATAAGCGCGGTGGCCAAGTGCGGCAGGTACAAGGAGGCCCTCTCGATG
ATGGAGCAGATGCGGAAGGACGACATCGAATTTGACGTCTACACCTACAG
CGGCGCGATCACGGCGTGCGGGAAAGGGGGACAGGCGCGGAAAGCGCTGT
CGCTGTTGGACGAGATGGTCAAGAAGTACGTGCGATAAGCGCGGTGGCCA
AGTGCGGCAGGTACAAGGAGGCCCTCTCGATGATGGAGCAGATGCGGAAG
GACGACATCGAATTTGACGTCTACACCTACAGCGGCGCGATCACGGCGTG
CGGGAAAGGGGGACAGGCGCGGAAAGCGCTGTCGCTGTTGGACGAGATGG
TCAAGAAGTACGGCCTTACCCCAGACATGGTTTGCTACGGAGCAGCCGCG
CAAGCGTGCGCGGACGCGGGACTGTCGGAGGAAGCGTCTGGCATCATGCG
CCGAATGAACGCCGACGAATTCGTACCGGACAAGGCGGTCTACAACTCGG
CCATCACTGCATGCGGGCAGAATGGGGAGTGGGAAAAGGCGCTGGACATC
CTGGGGGAGATGAGGGCCGCGGGGCTAAGGCCGGACCAGCACAGCTACCG
CTTCGCCATGAAGGCCTTACCCCAGACATGGTTTGCTACGGAGCAGCCGC
GCAAGCGTGCGCGGACGCGGGACTGTCGGAGGAAGCGTCTGGCATCATGC
GCCGAATGAACGCCGACGAATTCGTACCGGACAAGGCGGTCTACAACTCG
GCCATCACTGCATGCGGGCAGAATGGGGAGTGGGAAAAGGCGCTGGACAT
CCTGGGGGAGATGAGGGCCGCGGGGCTAAGGCCGGACCAGCACAGCTACC
GCTTCGCCATGAAGGCGTGTGGCAGTGGGGGTCGATGGGAGCGAGCCTTA
CAGCTTCTGTCCGATATGGAGGAGGATAGCCTCACGCCAGAGATACCGGC
GTTTCAGGCGGCTCTGGACACCCTTAGGGAGGCCGGCCAATGGGAAAAGG
CGTGTGGCAGTGGGGGTCGATGGGAGCGAGCCTTACAGCTTCTGTCCGAT
ATGGAGGAGGATAGCCTCACGCCAGAGATACCGGCGTTTCAGGCGGCTCT
GGACACCCTTAGGGAGGCCGGCCAATGGGAAAAGGCCTTGGAGCTGATCT
CCGAGATGGATGAGTTGGGGGTGGCGCCGACAGAGGAGTGCTTCGCTGCG
GCTATCGCGGCGTGCGCGGAGGTCGGCCAGTGGAGAGCGGCGTGCGATGC
CGTCAAGACCATGAGGCCTTGGAGCTGATCTCCGAGATGGATGAGTTGGG
GGTGGCGCCGACAGAGGAGTGCTTCGCTGCGGCTATCGCGGCGTGCGCGG
AGGTCGGCCAGTGGAGAGCGGCGTGCGATGCCGTCAAGACCATGAGGGAC
CTTAACCTGCAGCCGTCAGTGTCGACTTACAACTCGGTGCTGAAGGCGTG
CGTGAGGGGGAAGAACTACTCAAGGGCGTTGACGACCATGAACGACATGA
GGGTCTCAGGAAAGCGACCGGAGCAGGAGTCGTGGGAGTTGCTCGTGGAG
GCGTGCACCGTGTGCGGGAGGTGGGAGTGCGCCGTGGAGGTGGTGCGGGA
CATGTTCGCGGAGGAGGGACCTTAACCTGCAGCCGTCAGTGTCGACTTAC
AACTCGGTGCTGAAGGCGTGCGTGAGGGGGAAGAACTACTCAAGGGCGTT
GACGACCATGAACGACATGAGGGTCTCAGGAAAGCGACCGGAGCAGGAGT
CGTGGGAGTTGCTCGTGGAGGCGTGCACCGTGTGCGGGAGGTGGGAGTGC
GCCGTGGAGGTGGTGCGGGACATGTTCGCGGAGGAGGTTTACTACGATAT
GGAGGCCATCCGTACGCGGTTATTCGAATGCCCGGTAGAGGATATTCGCA
AGGAGGGGTTGTTGATTATCGCGATGGAGGCGAGGAGCGCTGTTAGCATG
AAACGAAAAAAGCAGAATAACATTCGAATGGCGGCGAAGATCAAGGCCAA
GTACATGCCGGCGGACAGCAAGGCAGCGCCAAGAAGAAAACGGGCGGGAA
AACGATCCGACGGCGGCGTGCCGTCGTTTGCCGATAGGAATAACGAGTAA
GTTTACTACGATATGGAGGCCATCCGTACGCGGTTATTCGAATGCCCGGT
AGAGGATATTCGCAAGGAGGGGTTGTTGATTATCGCGATGGAGGCGAGGA
GCGCTGTTAGCATGAAACGAAAAAAGCAGAATAACATTCGAATGGCGGCG
AAGATCAAGGCCAAGTACATGCCGGCGGACAGCAAGGCAGCGCCAAGAAG
AAAACGGGCGGGAAAACGATCCGACGGCGGCGTGCCGTCGTTTGCCGATA
GGAATAACGAGTAA
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