mRNA_S-dermatodea_contig1252.1563.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig1252.1563.1
Unique NamemRNA_S-dermatodea_contig1252.1563.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig1252.1563.1 vs. uniprot
Match: D7G754_ECTSI (Protein kinase domain containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G754_ECTSI)

HSP 1 Score: 604 bits (1557), Expect = 3.650e-205
Identity = 358/583 (61.41%), Postives = 421/583 (72.21%), Query Frame = 1
Query:   94 MPPSLSGTVLKKKWKLGALVGTGGCAEVYEACHVQG-SGGTETEQFVAKIAPLPVGLPPAMNKGKKRKKTDQEKHADMIYYEYTLYKGFLLEHGGVVQIPTGGYGEDKNLRFLVMTRLGPDVEAAQKQSAPWSVARKAGYARLMLDLVRSLHEKCKMIFVDVKPENFMFGLPGSPDADKIFLIDFGLSFRFTGREGSIKPQSNSAQVQGTPEFLSLKCHGGASAGRCDDLESLGYVILSMLKEGSSPLPWSGSTSVANGLATKKSTSLETLCRGCPVQMLQYMKDVRGMDYEDTPDYDALDALLQAMQKSGGSATAAKSGGGGRSAAGRGEXXXXXPXXXXXXXXXXXXXXTPDAEISEAKAK--------------------GKKKEAAPAMQPAGGPAPRRSGRRSGDGDEEAFFDARED-------EDGDGELEAVKVTSGAAGKGGVSR--KAGTGASSGAAGAQKSAHRGAAAQKE----FVLKVCGGPHDGQSLSLAPGGAEVRVGRNAPRKNGLRLDKDLEVSDKHAVLRPQADGILCEDVGSLNGSFVNEDRLEGAVVLKNGDVLQVGQSAVRVT 1740
            M PSL+GTVLK KWKLGALVG+GGCAEVYEA   +  S G     FVAKIAPLPVGLPPAM KG+KRKKT++EKHADMIYYEYTLYKGFL EHGGVV+IP GGYGED+NLR+LVM+RLGPDVEAA K+S  WSVARKAGYAR ML L+R+LHE C+M+F+DVKPENFMFG+P S D DKIFLIDFGLS R+TG  G+IKPQ  SAQ+QGTPEFLSLKCHGGASAGRCDDLESLGYVI++MLKEG   LPWSGSTSV +GLA+KKST+LE +C GCP  ML+YMK VRG++YE+TPDYD+LDA+L++M+ SGG+                  XXXXX XXXXXXXXX        A + + K                      G  K+ A         A RRS R S   D E F DA ++       E+ + +L+  KV +GAA KG   R  K     S+ AA A K + R  A + +    F+L+V  GPH+G++L +   GAEVRVGRNAPR+NGLRLDKD EVSDKHA+LRP ADGI  ED+GSLNGSFVNEDRLEGA VL++GDVLQVGQS V++T
Sbjct:    1 MNPSLTGTVLKNKWKLGALVGSGGCAEVYEAIDARAESAGASDGPFVAKIAPLPVGLPPAMTKGRKRKKTEEEKHADMIYYEYTLYKGFLAEHGGVVEIPPGGYGEDQNLRYLVMSRLGPDVEAALKKSEGWSVARKAGYARQMLALLRTLHESCRMVFIDVKPENFMFGVPDSADEDKIFLIDFGLSARYTGPAGAIKPQGQSAQIQGTPEFLSLKCHGGASAGRCDDLESLGYVIVAMLKEGDRALPWSGSTSVKDGLASKKSTTLEEVCEGCPAGMLKYMKAVRGLEYEETPDYDSLDAMLKSME-SGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREEERDVGACVDDGKXXXXXXXXXXXXXXXXXXXXXXGSPKQRATT-------AVRRSRRLSSPKDGEEFHDALQEHGMDEGEEEEEEDLQVTKVVNGAANKGTGRRGTKPTEKLSTAAAAAVKKSTRAKATKAKANGVFLLEVVSGPHEGETLRMKASGAEVRVGRNAPRRNGLRLDKDFEVSDKHAILRPGADGIGLEDLGSLNGSFVNEDRLEGAAVLQHGDVLQVGQSIVQIT 575          
BLAST of mRNA_S-dermatodea_contig1252.1563.1 vs. uniprot
Match: D7FQK2_ECTSI (Protein kinase domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQK2_ECTSI)

HSP 1 Score: 431 bits (1107), Expect = 8.390e-141
Identity = 214/311 (68.81%), Postives = 251/311 (80.71%), Query Frame = 1
Query:  106 LSGTVLKKKWKLGALVGTGGCAEVYEACHVQGSGGTETEQFVAKIAPLPVGLPPAMNKGKK--RKKTDQEKHADMIYYEYTLYKGFLLEHGGVVQIPTGGYGEDKNLRFLVMTRLGPDVEAAQKQSAPWSVARKAGYARLMLDLVRSLHEKCKMIFVDVKPENFMFGLPGSPDADKIFLIDFGLSFRFTGREGSIKPQSNSAQVQGTPEFLSLKCHGGASAGRCDDLESLGYVILSMLKEGSSPLPWSGSTSVANGLATKKSTSLETLCRGCPVQMLQYMKDVRGMDYEDTPDYDALDALLQAMQKSGGSA 1032
            L+GTVL KKWKLGALVG+GGCAEVYEA      G +    FVAKIAP+PV LP A  KG+   ++KT++EKHADMI+YE+ LY   L +H GVV+IP  GYGED+NLR+LVMTRLG DVEAA K S  WSVARK GYAR ML L+R+LHEKC+M+F+DVKPENFMFG+PGS D DKIFLIDFGLS R+    G IKPQ  SAQ+QGT EFLSLKCHGGASAGRCDDLESLGYVI+SMLKEG   LPWSGS+SV +GLA KKS +LE LCRGCP  ML+YMK VRGM++E+ PDYD LDA+L++M+ +G +A
Sbjct:    5 LTGTVLNKKWKLGALVGSGGCAEVYEAEATGSRGQSADGPFVAKIAPVPVALPLAAKKGRYAYKRKTEEEKHADMIHYEHVLYTASLAKHVGVVEIPRNGYGEDQNLRYLVMTRLGLDVEAALKTSKGWSVARKTGYARQMLALLRALHEKCQMVFIDVKPENFMFGVPGSADEDKIFLIDFGLSTRYVAPRGGIKPQGQSAQIQGTAEFLSLKCHGGASAGRCDDLESLGYVIVSMLKEGDRALPWSGSSSVKDGLAAKKSATLEALCRGCPAGMLEYMKAVRGMEFEEAPDYDKLDAVLKSMESAGAAA 315          
BLAST of mRNA_S-dermatodea_contig1252.1563.1 vs. uniprot
Match: G5AB04_PHYSP (Protein kinase domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AB04_PHYSP)

HSP 1 Score: 216 bits (551), Expect = 1.200e-58
Identity = 124/307 (40.39%), Postives = 175/307 (57.00%), Query Frame = 1
Query:  106 LSGTVLKKKWKLGALVGTGGCAEVYEACHVQGSGGTETEQFVAKIAPLPVGLPPAMNKGKKRKKTDQEKHADMIYYEYTLYKGFLLEHGGVVQIPTGGYGEDKNLRFLVMTRLGPDVEAAQKQSAPWSVARKAGYARLMLDLVRSLHEKCKMIFVDVKPENFMFGLPGSPDADKIFLIDFGLSFRFTGREGSIKPQSNSAQVQGTPEFLSLKCHGGASAGRCDDLESLGYVILSMLKEGSSPLPWSGSTSVANGLATKKSTSLETLCRGCPVQMLQYMKDVRGMDYEDTPDYDALDALLQAMQKSGG 1026
            + GT LK  W+LG  +G+G C++VY    V   G     + V K++PLP  LP A  K KKRKKT  E++AD +Y E+ LYK  L +  G+  +P G YGEDK  RFLV+ RLG  +E   ++  P   A  A   + +LD ++ +H K  +++VDVKPENFM     +   D ++ +DFG+S R+    G  K       V GTP FLSL CH GA++ R DD+ESL YV++ +++     LPW  ++S A G   KKSTS++ LC   P +    +K++R   +ED PDYD      Q   K GG
Sbjct:    1 MEGTTLKT-WRLGKKLGSGACSDVYAVESVSSLGSDAGRELVMKLSPLPQ-LPAAKLKNKKRKKTPAERNADALYAEHLLYKNHLRDQPGIPYVPMGAYGEDKGYRFLVIERLGRTLETVLQEQGPVPSATAARLGQEILDTLQQMHVK-NILYVDVKPENFMLD---TDKEDTVYCVDFGISDRYVAATGKHKDYKEGTVV-GTPTFLSLNCHNGATSSRRDDIESLLYVLIYLMR---GDLPWQQASSDAEGAKIKKSTSVDQLCASLPREWAAMLKNIRECGFEDRPDYDF---FAQQFSKLGG 294          
BLAST of mRNA_S-dermatodea_contig1252.1563.1 vs. uniprot
Match: A0A225X386_9STRA (Casein kinase I n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X386_9STRA)

HSP 1 Score: 215 bits (548), Expect = 2.980e-58
Identity = 122/307 (39.74%), Postives = 177/307 (57.65%), Query Frame = 1
Query:  106 LSGTVLKKKWKLGALVGTGGCAEVYEACHVQGSGGTETEQFVAKIAPLPVGLPPAMNKGKKRKKTDQEKHADMIYYEYTLYKGFLLEHGGVVQIPTGGYGEDKNLRFLVMTRLGPDVEAAQKQSAPWSVARKAGYARLMLDLVRSLHEKCKMIFVDVKPENFMFGLPGSPDADKIFLIDFGLSFRFTGREGSIKPQSNSAQVQGTPEFLSLKCHGGASAGRCDDLESLGYVILSMLKEGSSPLPWSGSTSVANGLATKKSTSLETLCRGCPVQMLQYMKDVRGMDYEDTPDYDALDALLQAMQKSGG 1026
            + GT+LK  W+LG  +G+G C++VY    V   G  E  QFV K++PLP  LP A  K KKRKKT  E++AD +Y E+ LYK  L +  G+  +P G YGEDK  RFLV+ RLG  +E   ++  P      A   + +L+ ++ +H K  +++VDVKPENFM     +   +K++ +DFG+S R+    G  K       V GTP FLSL CH GA++ R DD+ESL YV++ +++     LPW  ++S + G   K + S++ LC   P +    +K +R  D+ED PDYD     +Q   K GG
Sbjct:    1 MEGTMLKT-WRLGKKLGSGACSDVYAVESVNPLGSDEGRQFVLKLSPLPQ-LPAAKLKNKKRKKTPAERNADALYAEHLLYKNHLRDQPGIPYVPMGAYGEDKGYRFLVIERLGRTLETVLQEQGPTPSRTAARLGQEILETLQQMHVK-NILYVDVKPENFMLD---TGKENKVYCVDFGISDRYVTATGKHKDYKEGTVV-GTPTFLSLNCHNGATSSRRDDIESLLYVLIYLMR---GDLPWQQASSDSEGAKIKTAISVDQLCTSLPQEWAAMLKKIRACDFEDRPDYDF---FMQQFSKLGG 294          
BLAST of mRNA_S-dermatodea_contig1252.1563.1 vs. uniprot
Match: A0A6G0RB15_9STRA (Protein kinase domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6G0RB15_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.590e-57
Identity = 127/312 (40.71%), Postives = 178/312 (57.05%), Query Frame = 1
Query:  106 LSGTVLKKKWKLGALVGTGGCAEVYEACHVQGSGGTETEQFVAKIAPLPVGLPPAM--NKGKKRKKTDQEKHADMIYYEYTLYKGFLLEHGGVVQIPTGGYGEDKNLRFLVMTRLGPDVEAAQKQSAPWSVARKAGYARLMLDLVRSLHEKCKMIFVDVKPENFMFGLPGSPDAD---KIFLIDFGLSFRFTGREGSIKPQSNSAQVQGTPEFLSLKCHGGASAGRCDDLESLGYVILSMLKEGSSPLPWSGSTSVANGLATKKSTSLETLCRGCPVQMLQYMKDVRGMDYEDTPDYDALDALLQAMQKSGG 1026
            + GT LK  W+LG  +G+G C++VY    V   G     +FV K++PLP  LP A   NK KKRKKT  E++AD +Y E+ LYK  L +  G+  +P G YGEDK  RFLV+ RLG  +E   ++  P      A     +LD ++ +H K  +++VDVKPENFM       DAD   K++ +DFG+S R+    G  K       V GTP FLSL CH GA++ R DD+ESL YV++ +++     LPW  ++S A G   KK+TS++ LC   P +    +K++R   +ED PDYD     +Q   K GG
Sbjct:    1 MEGTTLKT-WRLGKKLGSGACSDVYAVESVSSLGSDAGREFVMKLSPLPQ-LPAAKLKNKNKKRKKTPAERNADALYAEHLLYKNHLRDQPGIPYVPMGAYGEDKGYRFLVIERLGRTLETVLQEQGPVPSGTAARLGLEILDTLQQMHVK-NILYVDVKPENFML------DADTENKVYCVDFGISDRYVAATGKHKDYKEGTVV-GTPTFLSLNCHSGATSSRRDDIESLLYVLIYLVR---GDLPWQQASSDAEGAKIKKNTSVDQLCASLPREWGAMLKNIRECGFEDRPDYDF---FVQQFSKLGG 296          
BLAST of mRNA_S-dermatodea_contig1252.1563.1 vs. uniprot
Match: W2FLA2_PHYPR (CK1/CK1 protein kinase n=11 Tax=Phytophthora TaxID=4783 RepID=W2FLA2_PHYPR)

HSP 1 Score: 213 bits (541), Expect = 2.810e-57
Identity = 120/293 (40.96%), Postives = 170/293 (58.02%), Query Frame = 1
Query:  106 LSGTVLKKKWKLGALVGTGGCAEVYEACHVQGSGGTETEQFVAKIAPLPVGLPPAMNKGKKRKKTDQEKHADMIYYEYTLYKGFLLEHGGVVQIPTGGYGEDKNLRFLVMTRLGPDVEAAQKQSAPWSVARKAGYARLMLDLVRSLHEKCKMIFVDVKPENFMFGLPGSPDADKIFLIDFGLSFRFTGREGSIKPQSNSAQVQGTPEFLSLKCHGGASAGRCDDLESLGYVILSMLKEGSSPLPWSGSTSVANGLATKKSTSLETLCRGCPVQMLQYMKDVRGMDYEDTPDYD 984
            + GT LK  W+LG  +G+G C++VY    V   G      FV K++PLP  LP A  K KKRKKT  E++AD +Y E+ LYK  L +  G+  +P GGYGEDK  R+LV+ RLG  +E    +  P   A  A     +L+ ++ +H K  +++VDVKPENFM     +   +K++ +DFG+S R+    G  K       V GTP FLSL CH GA++ R DD+ESL YV++ +++     LPW  ++S A G   KK+TS+E LC   P +    +K +R   +ED PDYD
Sbjct:    1 MEGTTLKT-WRLGKKLGSGACSDVYAVESVNPLGSDAGRDFVMKLSPLPQ-LPAAKLKNKKRKKTPAERNADALYAEHLLYKNHLRDQPGIPYVPMGGYGEDKGYRYLVIERLGRTLETVLMEQGPVPSATAARLGLEILETLQQMHVK-NILYVDVKPENFMLD---THRENKVYCVDFGISDRYVTATGKHKDYKEGTVV-GTPTFLSLSCHNGATSSRRDDIESLLYVLIYLMR---GDLPWQQASSDAEGAKIKKTTSVEHLCASLPSEWSTMLKQIRECGFEDRPDYD 283          
BLAST of mRNA_S-dermatodea_contig1252.1563.1 vs. uniprot
Match: A0A2P4YB84_9STRA (Casein Kinase I n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YB84_9STRA)

HSP 1 Score: 212 bits (540), Expect = 4.380e-57
Identity = 121/307 (39.41%), Postives = 175/307 (57.00%), Query Frame = 1
Query:  106 LSGTVLKKKWKLGALVGTGGCAEVYEACHVQGSGGTETEQFVAKIAPLPVGLPPAMNKGKKRKKTDQEKHADMIYYEYTLYKGFLLEHGGVVQIPTGGYGEDKNLRFLVMTRLGPDVEAAQKQSAPWSVARKAGYARLMLDLVRSLHEKCKMIFVDVKPENFMFGLPGSPDADKIFLIDFGLSFRFTGREGSIKPQSNSAQVQGTPEFLSLKCHGGASAGRCDDLESLGYVILSMLKEGSSPLPWSGSTSVANGLATKKSTSLETLCRGCPVQMLQYMKDVRGMDYEDTPDYDALDALLQAMQKSGG 1026
            + GT LK  W+LG  +G+G C++VY    V   G     +FV K++PLP  LP A  K KKRKKT  E++ D +Y E+ LYK  L +  G+  +P G YGEDK  RFLV+ RLG  +E   ++  P      A   + +L+ ++ +H K  +++VDVKPENFM     +   +K++ +DFG+S R+    G  K       V GTP FLS+ CH GA++ R DD+ESL YV++ ++K G   LPW  ++S + G   K +TS++ LC   P      +K +R  D+ED PDYD     +Q   K GG
Sbjct:    1 MEGTTLKT-WRLGKKLGSGACSDVYAVESVSSLGTDAGREFVMKLSPLPQ-LPAAKLKNKKRKKTPAERNVDALYAEHLLYKNHLRDQPGIPYVPMGAYGEDKGYRFLVIERLGRTLETVLQEQGPIPSRTAARLGQEILETLQQMHVK-NILYVDVKPENFMLD---TDKENKVYCVDFGISDRYVTATGKHKDYKEGTVV-GTPTFLSMNCHNGATSSRRDDIESLLYVLIYLMKGG---LPWQQASSDSEGAKIKSATSVDQLCASLPQVWGSMLKKIRACDFEDRPDYDF---FVQQFTKLGG 294          
BLAST of mRNA_S-dermatodea_contig1252.1563.1 vs. uniprot
Match: D0N9V7_PHYIT (Casein kinase I, putative n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0N9V7_PHYIT)

HSP 1 Score: 210 bits (535), Expect = 1.910e-56
Identity = 122/308 (39.61%), Postives = 178/308 (57.79%), Query Frame = 1
Query:  106 LSGTVLKKKWKLGALVGTGGCAEVYEACHVQGSGGTETEQFVAKIAPLPVGLPPAMNKGKKRKKTDQEKHADMIYYEYTLYKGFLLEHGGVVQIPTGGYGEDKNLRFLVMTRLGPDVEAAQKQSAPWSVARKAGYARLMLDLVRSLHEKCKMIFVDVKPENFMFGLPGSPDADKIFLIDFGLSFRFTGREGSIKPQSNSAQVQGTPEFLSLKCHGGASAGRCDDLESLGYVILSMLKEGSSPLPWSGSTSVANGLATKKSTSLETLCRGCPVQMLQYMKDVRGMDYEDTPDYDALDALLQAMQKSGGS 1029
            + GT LK  W+LG  +G+G C++VY    +         +FV K++PLP  LP A  K KKRKKT  E++AD +Y E+ LYK  L +  G+  +P G YGEDK  RFLV+ RLG  +E   ++  P S A  A   + +L+ ++ +H K  +++VDVKPENFM  +      + ++ +DFG+S R+    G  K +     V GTP FLS+ CH GA++ R DD+ESL YV++ +++     LPW  ++S A G   KKSTS+E LC   P      +K++R   +ED PDYD     +  + K GGS
Sbjct:    1 MEGTTLKS-WRLGKKLGSGACSDVYAVEPMSPLSRDAGREFVMKLSPLPQ-LPAAKLKNKKRKKTPAERNADALYAEHLLYKNHLRDQPGIPYVPMGAYGEDKGYRFLVIERLGRTLETVLQEQGPVSSATAARLGQEILETLQQMHVK-NILYVDVKPENFMLDMRSE---NTVYCVDFGISDRYVTATGKHK-EYKEGTVVGTPTFLSINCHDGATSSRRDDIESLLYVLVYLMRGN---LPWQKASSDAEGAKIKKSTSVEQLCASLPNAWGAMLKNIRYCGFEDRPDYDF---FVMQLSKLGGS 295          
BLAST of mRNA_S-dermatodea_contig1252.1563.1 vs. uniprot
Match: A0A329RNY3_9STRA (Protein kinase domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RNY3_9STRA)

HSP 1 Score: 206 bits (524), Expect = 5.640e-55
Identity = 115/293 (39.25%), Postives = 170/293 (58.02%), Query Frame = 1
Query:  106 LSGTVLKKKWKLGALVGTGGCAEVYEACHVQGSGGTETEQFVAKIAPLPVGLPPAMNKGKKRKKTDQEKHADMIYYEYTLYKGFLLEHGGVVQIPTGGYGEDKNLRFLVMTRLGPDVEAAQKQSAPWSVARKAGYARLMLDLVRSLHEKCKMIFVDVKPENFMFGLPGSPDADKIFLIDFGLSFRFTGREGSIKPQSNSAQVQGTPEFLSLKCHGGASAGRCDDLESLGYVILSMLKEGSSPLPWSGSTSVANGLATKKSTSLETLCRGCPVQMLQYMKDVRGMDYEDTPDYD 984
            + GT LK  W+LG  +G+G C++VY        G     +FV K++PLP  LP +  K KKRKKT  E++AD +Y E+ LYK  L +  G+  +P G YGEDK  RFLV+ RLG  +E   ++  P   A  A   + +L+ ++ +H K  +++VDVKPENFM     +   +K++ +DFG+S R+    G  K       V GTP FLS+ CH GA++ R DD+ESL YV++ +++     LPW  ++S A G   KK TS++ LC   P +    ++ +R   +ED PDYD
Sbjct:    1 MEGTTLKT-WRLGKKLGSGACSDVYAVESESPLGSDAGREFVMKLSPLPQ-LPASKLKNKKRKKTPAERNADALYAEHLLYKNHLRDQPGIPYVPMGAYGEDKGYRFLVIERLGRTLETVLQEQGPVPSATAARLGQEILETLQQMHVK-NILYVDVKPENFMLD---THKENKVYCVDFGISDRYVTATGKHKDYKEGTVV-GTPTFLSMNCHNGATSSRRDDIESLLYVLIYLMR---GDLPWQQASSDAEGAKIKKVTSVDQLCASVPSEWGAMLEHIRDCGFEDRPDYD 283          
BLAST of mRNA_S-dermatodea_contig1252.1563.1 vs. uniprot
Match: K3X2I7_GLOUD (Protein kinase domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2I7_GLOUD)

HSP 1 Score: 205 bits (522), Expect = 8.740e-55
Identity = 115/289 (39.79%), Postives = 174/289 (60.21%), Query Frame = 1
Query:  127 KKWKLGALVGTGGCAEVYEACHVQGSGGTETEQFVAKIAPLPVGLPPAMNKGKKRKKTDQEKHADMIYYEYTLYKGFLLEHGGVVQIPTGGYGEDKNLRFLVMTRLGPDVEAAQKQSAPWSVARKAGYARLMLDLVRSLHEKCKMIFVDVKPENFMFGLPGSPDAD---KIFLIDFGLSFRFTGREGSIKPQSNSAQVQGTPEFLSLKCHGGASAGRCDDLESLGYVILSMLKEGSSPLPWSGSTSVANGLATKKSTSLETLCRGCPVQMLQYMKDVRGMDYEDTPDYD 984
            K W+LG  +G+G C++VY    ++    ++  QFV K++P+P  +PP+  K KKRKKT  E++AD +Y E+ LY+ +L +H  V +IP G YGEDK  RFLV+ RLG  +E   ++  P   A  A     ++D ++ +H    +I+VDVKPENFM       DAD   KI+++DFG+S R+    G  K +     + GTP FLSL CH GA+  R DD+E+L +V+L ++  GS  LPW   +S A G   KK+TS++ LC+  P +    ++ +R   +++ PDYD
Sbjct:    7 KNWRLGKKIGSGACSDVYAVEPIKPISASKGTQFVMKVSPIPE-IPPSKAKNKKRKKTPAERNADALYAEHLLYQSYLRDHPRVPKIPDGAYGEDKGYRFLVLERLGRTLETVLQEEGPIPSATAARLGLELMDTLKHMHVN-NIIYVDVKPENFML------DADRESKIYVVDFGISDRYVMATGKHK-EHKMGNIVGTPTFLSLNCHIGATPSRRDDIEALLHVLLYLML-GS--LPWQKVSSDAEGAKLKKATSVDQLCQTLPQEWKLMLEKIRACKFDEKPDYD 283          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1252.1563.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G754_ECTSI3.650e-20561.41Protein kinase domain containing protein n=2 Tax=E... [more]
D7FQK2_ECTSI8.390e-14168.81Protein kinase domain containing protein n=1 Tax=E... [more]
G5AB04_PHYSP1.200e-5840.39Protein kinase domain-containing protein n=1 Tax=P... [more]
A0A225X386_9STRA2.980e-5839.74Casein kinase I n=1 Tax=Phytophthora megakarya Tax... [more]
A0A6G0RB15_9STRA1.590e-5740.71Protein kinase domain-containing protein n=3 Tax=P... [more]
W2FLA2_PHYPR2.810e-5740.96CK1/CK1 protein kinase n=11 Tax=Phytophthora TaxID... [more]
A0A2P4YB84_9STRA4.380e-5739.41Casein Kinase I n=2 Tax=Phytophthora palmivora var... [more]
D0N9V7_PHYIT1.910e-5639.61Casein kinase I, putative n=3 Tax=Phytophthora inf... [more]
A0A329RNY3_9STRA5.640e-5539.25Protein kinase domain-containing protein n=2 Tax=P... [more]
K3X2I7_GLOUD8.740e-5539.79Protein kinase domain-containing protein n=1 Tax=G... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1252contigS-dermatodea_contig1252:5917..13789 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score612.5
Seed ortholog evalue2e-172
Seed eggNOG ortholog2880.D7G754
KEGG koko:K02218
KEGG Pathwayko04011,ko04392,map04011,map04392
EggNOG free text desc.peptidyl-serine phosphorylation
EggNOG OGsKOG1164@1,KOG1165@2759
EC2.7.11.1
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein kinase domain containing protein
Ec32 orthologEc-01_011000.1
Exons8
Model size2594
Cds size1653
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1252.1563.1prot_S-dermatodea_contig1252.1563.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig1252 6010..12941 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924251.3907516-UTR-S-dermatodea_contig1252:5916..60091622924251.3907516-UTR-S-dermatodea_contig1252:5916..6009Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1252 5917..6009 +
1694079125.7297375-UTR-S-dermatodea_contig1252:5916..60091694079125.7297375-UTR-S-dermatodea_contig1252:5916..6009Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1252 5917..6009 +
1622924251.481125-UTR-S-dermatodea_contig1252:12941..137891622924251.481125-UTR-S-dermatodea_contig1252:12941..13789Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1252 12942..13789 +
1694079125.8360364-UTR-S-dermatodea_contig1252:12941..137891694079125.8360364-UTR-S-dermatodea_contig1252:12941..13789Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1252 12942..13789 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924251.4031894-CDS-S-dermatodea_contig1252:6009..63001622924251.4031894-CDS-S-dermatodea_contig1252:6009..6300Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1252 6010..6300 +
1694079125.7404933-CDS-S-dermatodea_contig1252:6009..63001694079125.7404933-CDS-S-dermatodea_contig1252:6009..6300Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1252 6010..6300 +
1622924251.411309-CDS-S-dermatodea_contig1252:7382..75811622924251.411309-CDS-S-dermatodea_contig1252:7382..7581Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1252 7383..7581 +
1694079125.7562232-CDS-S-dermatodea_contig1252:7382..75811694079125.7562232-CDS-S-dermatodea_contig1252:7382..7581Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1252 7383..7581 +
1622924251.420939-CDS-S-dermatodea_contig1252:8630..87061622924251.420939-CDS-S-dermatodea_contig1252:8630..8706Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1252 8631..8706 +
1694079125.7664745-CDS-S-dermatodea_contig1252:8630..87061694079125.7664745-CDS-S-dermatodea_contig1252:8630..8706Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1252 8631..8706 +
1622924251.4291422-CDS-S-dermatodea_contig1252:8931..90391622924251.4291422-CDS-S-dermatodea_contig1252:8931..9039Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1252 8932..9039 +
1694079125.7749178-CDS-S-dermatodea_contig1252:8931..90391694079125.7749178-CDS-S-dermatodea_contig1252:8931..9039Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1252 8932..9039 +
1622924251.4369562-CDS-S-dermatodea_contig1252:9402..98871622924251.4369562-CDS-S-dermatodea_contig1252:9402..9887Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1252 9403..9887 +
1694079125.784157-CDS-S-dermatodea_contig1252:9402..98871694079125.784157-CDS-S-dermatodea_contig1252:9402..9887Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1252 9403..9887 +
1622924251.4494286-CDS-S-dermatodea_contig1252:10004..102101622924251.4494286-CDS-S-dermatodea_contig1252:10004..10210Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1252 10005..10210 +
1694079125.7950377-CDS-S-dermatodea_contig1252:10004..102101694079125.7950377-CDS-S-dermatodea_contig1252:10004..10210Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1252 10005..10210 +
1622924251.4640408-CDS-S-dermatodea_contig1252:11699..118271622924251.4640408-CDS-S-dermatodea_contig1252:11699..11827Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1252 11700..11827 +
1694079125.806082-CDS-S-dermatodea_contig1252:11699..118271694079125.806082-CDS-S-dermatodea_contig1252:11699..11827Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1252 11700..11827 +
1622924251.472567-CDS-S-dermatodea_contig1252:12781..129411622924251.472567-CDS-S-dermatodea_contig1252:12781..12941Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1252 12782..12941 +
1694079125.8239453-CDS-S-dermatodea_contig1252:12781..129411694079125.8239453-CDS-S-dermatodea_contig1252:12781..12941Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1252 12782..12941 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig1252.1563.1

>prot_S-dermatodea_contig1252.1563.1 ID=prot_S-dermatodea_contig1252.1563.1|Name=mRNA_S-dermatodea_contig1252.1563.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=551bp
MPPSLSGTVLKKKWKLGALVGTGGCAEVYEACHVQGSGGTETEQFVAKIA
PLPVGLPPAMNKGKKRKKTDQEKHADMIYYEYTLYKGFLLEHGGVVQIPT
GGYGEDKNLRFLVMTRLGPDVEAAQKQSAPWSVARKAGYARLMLDLVRSL
HEKCKMIFVDVKPENFMFGLPGSPDADKIFLIDFGLSFRFTGREGSIKPQ
SNSAQVQGTPEFLSLKCHGGASAGRCDDLESLGYVILSMLKEGSSPLPWS
GSTSVANGLATKKSTSLETLCRGCPVQMLQYMKDVRGMDYEDTPDYDALD
ALLQAMQKSGGSATAAKSGGGGRSAAGRGENSSAQPKAASAKPSKGKAKP
TPDAEISEAKAKGKKKEAAPAMQPAGGPAPRRSGRRSGDGDEEAFFDARE
DEDGDGELEAVKVTSGAAGKGGVSRKAGTGASSGAAGAQKSAHRGAAAQK
EFVLKVCGGPHDGQSLSLAPGGAEVRVGRNAPRKNGLRLDKDLEVSDKHA
VLRPQADGILCEDVGSLNGSFVNEDRLEGAVVLKNGDVLQVGQSAVRVTR
*
back to top

mRNA from alignment at S-dermatodea_contig1252:5917..13789+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig1252.1563.1 ID=mRNA_S-dermatodea_contig1252.1563.1|Name=mRNA_S-dermatodea_contig1252.1563.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7873bp|location=Sequence derived from alignment at S-dermatodea_contig1252:5917..13789+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GTTCGGCTCACAGTTTTCGGCTGGTGCTCTGGTCCTTCCTCGAGCGCACC GCTGAGCGGCCTAGGAGCTCTCAGCAATAAACCCACGGCCGCGATGCCTC CTTCCCTGAGCGGCACCGTGCTCAAGAAAAAGTGGAAATTGGGCGCCCTG GTGGGCACCGGTGGGTGCGCTGAGGTGTACGAGGCATGCCATGTTCAAGG AAGCGGCGGGACCGAGACGGAGCAGTTCGTCGCTAAGATCGCGCCGCTCC CTGTGGGGCTGCCTCCAGCGATGAACAAGGGGAAGAAGCGCAAGAAGACG GACCAGGAGAAGCACGCGGACATGATATATTACGAGTACACGCTGTACAA GGGGTTCCTGCTTGAGCACGGCGGCGTCGTTCAGGTGTGTTTTTGAGTTT TTGTCACCAGCAATCTGTCTGTTCTTCGGTTTATGTTTGTGATGGATGTT TTACACATGTCAAATGCGGCGTGTAGCACATGTACAAGTAGGAGACTTCG GTGGGTTGGCTGCCTGGCATGCCGCACTTCTTCTGTGGGGATCATAGGGC GATCAGCTGATCCCGTAAGTGTTGAAAACATGCAGCTTGTATCCGGAGGA TGTACAGATAAAGAGTGCGCGTGTCTGGTGTGTCCTCCCACGGGTGCCTT TGTATATTAATAGTGAATCTAATAGTTTGTAAATTCGTCAACAATCTTCT GTCTCGTGCAGCCCGTGTGGACGTCTGTCTCGAGCATGAACATGTCCCAA ACAGCGTTGGGCGCACCCAGCTTTCTGCTTCTGTATCCTGTGTGTGCGCA GAGTGAAGCGTTGGAGAGAAATTTTACGCAGGGATAAATAACTCAAGATG TGAGACTACTTGTACTTCGTTTTCCCTGCCAGGTTCGAGAGCCCACACTC TCTGCCTGCAGCTGTTATGTATGATCTTCTGGCCTCTTGCCTGCTTTTTA TCTTTGTATCCCATACCGGCCTCATCAGCCGAAGAACTCTCTATCAATAG CTCGAAGACCTGATCACCAAGAGTAGATGATACAAATAATCGCGCAGGCT CAGGTTGAATTGCGACCTGGCTTCTTGGCCGCCCAGACGGCTGGCCGTTC GCCGTATCACAACACCCCACACCTGCAGGGAAACCGAACCACCCACGAAC ATGAACAAAACAGTCAATTAAGTATAAAACTGTAGTGTATCATCGCTCCT ATACTACATTTGTATATCGATATGTACTTGCGGAGAAAGTGTGCACATGC ATACATCAGCATAGCCCGAGGCCGGCGAGCTGCGGGAGTGCTCACCAATG CGCGATAAAAACCCAAGGCGTGTGCCGGGGAGATATGGTTTGATCCCTCA TGATCACATACTGGGGTTTGACTAGATACACAAGCACACACAAACACACG CACACAATGCACGGCCGACCCCGACGACCCCTCCCCGTCCCATACGTATC GGTTCCTTCGGTACAGATCCCCACCGGGGGCTACGGAGAAGACAAAAACC TCCGCTTTCTGGTCATGACCAGGCTCGGACCGGACGTGGAAGCCGCGCAG AAGCAAAGCGCCCCCTGGTCCGTTGCTCGCAAGGCTGGCTACGCGCGATT GATGCTGGATCTCGTTCGGTCTCTTCACGAGAAGTGCAAGATGATTTTCG TCGACGTCAAGCCGGGTACGCGAGGGTTTTATGTGCGTGGGGTAACTGCT GTGTCTTGCGGTGCGTTTCACTTGCGTTCTGATAGCGGCGGTCGGTGCTG TTGCTTCGCGCTCGCTATTTGCAAAAATCGTGTGCTGTTGCCAGTTTGCA GTTTGCGGATTTATACAGTATCATGTGTTTTCCCTGGTTCAGTTTTTGTT CTTGTTTTTTTGTTGCTTTTTTCCTCGTACTTGATTCTCTCTCTGTCTCT GTCTTTCTGTCTTTTTTCCTTCTTCTATGTGTTTCTATATTCCGTCTGCC CTCACTCTTGTAATCGTGTCCCTGCCGCGTTGGACCTGGCCGTAGTACGA AAAAGGACCTGGTGGAGAGGCGCGGGAGCATTGTCCGATTCCGATTCCCC TTCCAGCCTTTTTATTTCTTCTATGATATTTCTGGGATATTATTTATTCT CTCTTGTACCATAGCATGTACCTGGTACCACGGACGGTACGGTGTATCGT AGAAGTAGAGTTATGAGTAGTACTCTTCTCCTTGACTCTTTGCGCATCTG ACCACAAGTCGGGCCGGATTAAGAGGATCGGCCATGCGTGTGAAAATCAA TGAATCAATGAATGAATCAATCCATCACTCAATGGTGGCACTTTGGAGAA GAAGGGCGTGTGTGTGTTTGTGTATGGCGAGTCCGGCGTATGCCAAGGTA GCCGTTGCTGAGAGAGGATGCTGCGCGCATGGGTGGGATCTGCGACCTTT CAAAAGTGCCGTCGGCTCAAAGCATCGTGGAACACCTCTGTGGTATGTCT TCAGGATCGCATGATAAATATCGCCAGAAAATACGGTGTTTCATACCGCG TAACCTTGAACCCTCTGGGCCAACCCGCTGACGGGGCACAAAGCGTTAAA CAGCACCCAGCGCAAGCAAGACCGCTGGGCTCGACTTGGTAGCGGTGCGA AGGTTAGAGTTCCTCAACGAACGGCCAACTTGGTCGTTTCGTTATGCCTT GCTTCGATTCCACGGACTAGTTCTGAAACCTGTTGGTCCCTCTGCCCTGC TGCGTGTGTACCAGAGAACTTCATGTTCGGGTTGCCGGGCTCCCCCGATG CAGACAAGATTTTCCTCATCGACTTCGGTCTCAGTTTCAGGTGAGTGCTC CATCACTTGCGCAGTGCTGTGGTCAATCCTACCGTGCACTACATATGTAG GAGGCATCTCGTTGTTGGAGTTGCCGGTGGCTGTGTTCCGGTCTTGACGC GAACTTCCTCTAGAATTAGGGCTCTGGGGTATGCGTTGCAGAGGAACATT GGCGCCCTTAACTTTTAGGAGCACTGGTCTTGAGTTTTTTTTTGTCTCGT TTGCTTTCTCGGCAGGTTCACAGGGCGGGAAGGCTCGATCAAGCCGCAGT CCAACAGCGCACAAGTGCAGGGCACGCCGGAGTTTTTGTCCCTCAAGTGC CACGGCGGCGCGAGCGCCGGAAGGTGAGTCAAGAAATGTGCCAGCACACG GGGCGCCCGTACATTATTTTCTGCTTTTTGAGCGTACCGTGCCTTCGACG CACCATGTGGCTTTGAAACATGGTAGCCTGAAGAGCAGTGGCCAAGGATA TGGGCTGGTAGGTAGCAGCACCGTGCCTTCGACGCACCATGTGGCTTCGA AACATGGTAGCCTGAAGAACAGTGGCCAAGGATATGGGCTGGTAGGTAGC AGCAGCGGTAGCGGTGGGGGACGTTCGACTAGAGTTGCATGTACAAGCGA TTATACCCTTTCGGTCCCCCCATGTCCCCGAGCACCAACAACGACTCGGC AAATCCCGTGTGGCACAATTTCCCGCGGACGCGCAGGTGTGATGACCTCG AGTCCCTCGGCTACGTCATCCTATCGATGCTGAAGGAGGGCTCGTCCCCC CTCCCGTGGAGTGGCTCCACCAGCGTGGCGAACGGCCTCGCAACGAAGAA ATCCACCTCCCTCGAAACCTTATGTCGGGGTTGCCCCGTGCAGATGCTTC AATACATGAAGGACGTCCGCGGCATGGACTACGAGGACACCCCGGACTAC GACGCGCTGGATGCTCTGCTCCAGGCGATGCAGAAGTCGGGGGGAAGTGC CACCGCGGCGAAATCCGGAGGGGGCGGTAGGAGTGCGGCTGGGCGAGGGG AAAATTCGTCCGCACAGCCGAAAGCCGCATCCGCCAAGCCCTCCAAGGGC AAAGCTAAGCCGACCCCAGACGCGGAGATTTCCGAGGCTAAAGCTAAGGG GAAGAAGAAGGAGGCGGCACCGGCGATGCAGCCTGCGGGGGGTCCAGCGC CGCGCCGCAGCGGGAGGCGGTGTGCGGCACCTGAGGAGGATGAACGCTCG CCATCGCCGGCGGCCGCCCGGCGGAAGACCGGTGGCGGCGGCGGCGGGGG GCGGGGCGAGCCTCGCAAGGCGAGCAAGCGCGGTAAAGCGGGGGACGGGG ACGAAGAAGCATTCTTTGACGCGCGAGAGGATGAAGATGGCGACGGTGAG TTGGAGGCTGTGAAGGTCACGTCGGGGGCGGCGGGCAAGGGTGGCGTGTC GCGGAAGGCCGGCACAGGAGCGTCGAGCGGAGCGGCGGGTGCCCAGAAGA GCGCGCACAGGGGTGCGGCTGCGCAGAAGGAGTTTGTGCTGAAGGTGAGC TGTGCCCGGGACTCGGTTGGGAGGGGGATTGGAGTCTGATTAATTGCCGT ATAGGAGTTGTGTCGGGTTGGCTAAATGCAGGCGGGCCTCCCGTGTGAGA GCCGATATTTTGGAATGAGGCCTAAAAGTTCATGCTAGGGTGACAGGTTT GACGTGAAATTTATCATTCCCCGATTTATTGTTGTTACAGATACAGGTTG CAAAACAAAGTTGGCATCTTGTTTTCATTTGGTAGCTCTCTGGGCCATAT TCGCAGGTGCCGATCCTTGTTGCGATACCAATGCCGAGATAAACCCGCCG ATCTGTAGCTCCGAAAGCTGCTTCGCGCTGTTGGAAAGCTCACCGAACAG CGTCTTGCTGGCACGCAGGCGCGTTCTGATAGTTTATGTTAGAACACCGG CGTCGTGGAGGCCTTTAAACACGGCCAGCAAGGCCAGCGATTGACAGATT AATGCCGTCCGCTGTCCGCCCGCAGCCATGTGCATGTGGCGCCGCCAGCC CAAAGGGGTTTGTTTCCCTTGCATAAAAAACAGTGTTTGCGGGAACCAAA AATGAAAGAGGGATAACCTCTGAAACGTTTTATTTTATGTTATTTACTCC CCCCTTGCGCGCGTGTTTCTCTTCCTGGCTGGGGTGTATATTACATATTA TAGCATCTTGCCCTGTCCCCCCTTTTAGGCCTCCCGTTTATTTCCCCCGC GTCTCCGCCCACGTGGTGCTGTTTCTTCCGTGGCTTGTTCTTGCCTTTCG GCGGCATGAGTTTTCTCTTTTTCTTTTTTAATGAAGTCCGAACGTCACTT TGTTATCGCTTGCTTTTCTTCCTCCGGGTCAGTAAATCAAATACAAGTAC TGTCCGCGAAGGTTTGATAGATATCGGGGCTCGGTTCGATGCATATTCGG CGGTGTACGCAGAACGAGCTGCTACGACGGCGAGCGCGATGTTTCTCTTG CATGATCGATTTGCTGGTAACTCGACGAAATCTAAGTTTTTTGTGCTTGT CTGCTGCTATTCGAGATGTCGTAGCACCCATTCATCCGGGTGTCCGCCAT TGACTCGAGCGCCGGATGCGATGTTCCCGTCTGGATCGTCATCGCCATGA TGGCGTCCGGCTTCTGTTCAAACTGTTGATGTATTGAGCTCTAGTGCGGG AATGCCCTTCGAGTGCCCTTTCCTTCCGCCCCCTTCCCTTCTGCCGTGTA CATGCAATCGCTGCTTGTATTTTACCAGCGATTCGCCTGCTTGGTGCGAC GAACACGCACACAGCGGAATTCGGCGCGTCCAATTCACACCACTTGCCTG TTCCGCGCCTTGCTCGCCCCTTGGGCACCGTACCGCCAATGCCACCGTTG CTGCCTTATGTATTGATGTTGCCTGTGTGCCACGTTCCAGCGCCCGATAC CAGTATTATAGTGGGTGCGCACCGTGTCTAGCTTGTGCGCGCGGTTGCTG ATATCGTGTGGCGCTCGCCTCTATCCAATCCAGGTGTGCGGTGGCCCTCA TGACGGCCAGAGTCTCAGCTTGGCGCCTGGCGGGGCGGAGGTCCGAGTAG GACGCAACGCTCCAAGGAAGAACGGGCTCCGATTGGACAAGGACTTGGAG GTTTCTGACAAGTGCGTACTTCCCAACGTGCTGGCGAATCTGTTGGAATC TGTTGGCCGGAGTTGGTGTCCTCCCCCCCCGCTGCTCAAACGACGTTCGT GGTTTAGTCCACCAGCCAGTGCCGAAGCGAATGATAAAGGAGCGAACCCT TAGCTGAGGCAGGGACGCTACCCCGTTGTGCGCCGTAGGGTTTCGTTGAT GTCGAAGGTAGCGAGGCGATGTGGAAAGTATGGTGCACATGTGTGCGTCA CATATAGGCAGGGGGGGCTTGTTTGCTTGCTTTTGTATGCACTCGGAAGC GCCCGGCGTCGTTTTTGCGCAGGAGGTGCTGGTTCTCTTCAGAACGACGT TGGTAGTTCGAAGGGTAATTAATCCCAGCCTGAAAATACGAAAGCACAAC ATTCGACCATTCAACATGGTTGTTTGCTCGAGCCTGATGGAGCCCCCCAG TGGACGGACCTGTGTGCTTTGCTTGGTCGTGGTTTTTGTTTTGGCGTCTA CCTTTGCCGTCGCAGCAGTATCTTTACTAATTAATAGCGCTTTGAACGTG TTTTCCTGTACGGTTTTTGAGGCTGATTTTGTCCACTAAACTCCTATACG ATTTTGGGTGATAGCCAAACAACTTGATGTTTGTGTTGCGCGCCAAACAA CTAGATTTTAGCTTTTGACGACCACGCACACCTCACGGGCGTAGCCCTGG CTGCCTACTAATATAGTTCCCCAGAAGGTTCAGCGCATTTTGTTTACGAT CGCGGAGGTTAAGGTTTTCCCAGATATCATTCAGTTTTTTTGCGAATGTG TCTGTTTTGTTTCCGTTTGATTCGATTCGATTCGATTCGCTGGTCTTTGT GACTGCGGCTGTGTTTTGAGAAGAGTTCTTCCTTGTGGGGACAACATGAA GAAAAACAAAAGGCTACAATGTCGCCTTGACCGCCAACTCTCTCTGCTTA TTTTCCCCCCGCCAGGCACGCCGTATTGCGCCCGCAAGCCGACGGTATCC TTTGCGAGGACGTCGGCAGCCTGAACGGGAGCTTCGTAAACGAGGACAGG CTGGAAGGCGCCGTGGTTCTCAAGAACGGGGATGTGCTGCAAGTCGGACA ATCCGCAGTGCGGGTAACTCGTTAGAGCTACAATAGACGTTTAGCAAACG TTTTAGTAGGACGCGTGTCCTACGCCACGACGCTCATGTGCTGCGCAAGC AAGTCGTTGTATGAGCGCTCTAAGGCAGGTTTCAGGCGTGCCCGTTTTTT GCCTGGAAGCTAAGGCTAGGCTGGTGTGGGTGGGTGGGTGCATTGGTCGT CTTCTGTTTGGATTGGCTTGAAATTGGACATTCAGGAGATCCAGGGTGAG TGCGCTTGAGGACTTTTATCACTCATGACTCTGGAGCTTTTGCGCGTGAA CGTTGCGTGCGGCGTCCCTTCTTACGTATCGTACCCCCACGGCGACCGTG GATCCGTGAACCTCGTAAGAACAGGTGTCGAAGTATGTCGTGTCGTGCAG GGTAACAGCTGGTGCCGCGCGATTTGGGCGTTAGCGTTCTATTCGTGTAC ATAGATACAATACGTAGTGTAGTAGGCCTGAACGGCTTTTTTTGTATTCC CAATACTTGTTCTTGTATGCGAAGGTTTTCTGGCCGCTACCGCAGGCGTT GGCCGCCACTGTAGCACTTCAAGCTGGGCCGACCAAGAAGCACATAAAGT ATCATATCCGCTGATCATATATTGTGAACGGCAACGAATCAGGGCAAGCT GACCATATCCTCGTGATCGGGTTGTCAAGGCGGTCATGCACATCCCTTCA GCGTAGAAATCCACCAGGTTTTCGTCGTGAAACCCGCTTCTCAGTTTTTT GCGATTTTATTGTGTCGGGTTATTGTGTGGCTCATCTGAATTTTTAACAC AAAATTGAAGTCGACCGATTTCGCTCAAATTTGGTATGCGTGTAGCTACC GATGCGCGAAAAAGAATGGTGGG
back to top

Coding sequence (CDS) from alignment at S-dermatodea_contig1252:5917..13789+

>mRNA_S-dermatodea_contig1252.1563.1 ID=mRNA_S-dermatodea_contig1252.1563.1|Name=mRNA_S-dermatodea_contig1252.1563.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3306bp|location=Sequence derived from alignment at S-dermatodea_contig1252:5917..13789+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCCTCCTTCCCTGAGCGGCACCGTGCTCAAGAAAAAGTGGAAATTGGG
CGCCCTGGTGGGCACCGGTGGGTGCGCTGAGGTGTACGAGGCATGCCATG
TTCAAGGAAGCGGCGGGACCGAGACGGAGCAGTTCGTCGCTAAGATCGCG
CCGCTCCCTGTGGGGCTGCCTCCAGCGATGAACAAGGGGAAGAAGCGCAA
GAAGACGGACCAGGAGAAGCACGCGGACATGATATATTACGAGTACACGC
TGTACAAGGGGTTCCTGCTTGAGCACGGCGGCGTCGTTCAGATGCCTCCT
TCCCTGAGCGGCACCGTGCTCAAGAAAAAGTGGAAATTGGGCGCCCTGGT
GGGCACCGGTGGGTGCGCTGAGGTGTACGAGGCATGCCATGTTCAAGGAA
GCGGCGGGACCGAGACGGAGCAGTTCGTCGCTAAGATCGCGCCGCTCCCT
GTGGGGCTGCCTCCAGCGATGAACAAGGGGAAGAAGCGCAAGAAGACGGA
CCAGGAGAAGCACGCGGACATGATATATTACGAGTACACGCTGTACAAGG
GGTTCCTGCTTGAGCACGGCGGCGTCGTTCAGATCCCCACCGGGGGCTAC
GGAGAAGACAAAAACCTCCGCTTTCTGGTCATGACCAGGCTCGGACCGGA
CGTGGAAGCCGCGCAGAAGCAAAGCGCCCCCTGGTCCGTTGCTCGCAAGG
CTGGCTACGCGCGATTGATGCTGGATCTCGTTCGGTCTCTTCACGAGAAG
TGCAAGATGATTTTCGTCGACGTCAAGCCGGATCCCCACCGGGGGCTACG
GAGAAGACAAAAACCTCCGCTTTCTGGTCATGACCAGGCTCGGACCGGAC
GTGGAAGCCGCGCAGAAGCAAAGCGCCCCCTGGTCCGTTGCTCGCAAGGC
TGGCTACGCGCGATTGATGCTGGATCTCGTTCGGTCTCTTCACGAGAAGT
GCAAGATGATTTTCGTCGACGTCAAGCCGGAGAACTTCATGTTCGGGTTG
CCGGGCTCCCCCGATGCAGACAAGATTTTCCTCATCGACTTCGGTCTCAG
TTTCAGAGAACTTCATGTTCGGGTTGCCGGGCTCCCCCGATGCAGACAAG
ATTTTCCTCATCGACTTCGGTCTCAGTTTCAGGTTCACAGGGCGGGAAGG
CTCGATCAAGCCGCAGTCCAACAGCGCACAAGTGCAGGGCACGCCGGAGT
TTTTGTCCCTCAAGTGCCACGGCGGCGCGAGCGCCGGAAGGTTCACAGGG
CGGGAAGGCTCGATCAAGCCGCAGTCCAACAGCGCACAAGTGCAGGGCAC
GCCGGAGTTTTTGTCCCTCAAGTGCCACGGCGGCGCGAGCGCCGGAAGGT
GTGATGACCTCGAGTCCCTCGGCTACGTCATCCTATCGATGCTGAAGGAG
GGCTCGTCCCCCCTCCCGTGGAGTGGCTCCACCAGCGTGGCGAACGGCCT
CGCAACGAAGAAATCCACCTCCCTCGAAACCTTATGTCGGGGTTGCCCCG
TGCAGATGCTTCAATACATGAAGGACGTCCGCGGCATGGACTACGAGGAC
ACCCCGGACTACGACGCGCTGGATGCTCTGCTCCAGGCGATGCAGAAGTC
GGGGGGAAGTGCCACCGCGGCGAAATCCGGAGGGGGCGGTAGGAGTGCGG
CTGGGCGAGGGGAAAATTCGTCCGCACAGCCGAAAGCCGCATCCGCCAAG
CCCTCCAAGGGCAAAGCTAAGCCGACCCCAGACGCGGAGATTTCCGAGGC
TAAAGCTAAGGGGAAGAAGAAGGAGGCGGCACCGGCGATGCAGCCTGCGG
GGGGTCCAGCGCCGCGCCGCAGCGGGAGGCGGTGTGTGATGACCTCGAGT
CCCTCGGCTACGTCATCCTATCGATGCTGAAGGAGGGCTCGTCCCCCCTC
CCGTGGAGTGGCTCCACCAGCGTGGCGAACGGCCTCGCAACGAAGAAATC
CACCTCCCTCGAAACCTTATGTCGGGGTTGCCCCGTGCAGATGCTTCAAT
ACATGAAGGACGTCCGCGGCATGGACTACGAGGACACCCCGGACTACGAC
GCGCTGGATGCTCTGCTCCAGGCGATGCAGAAGTCGGGGGGAAGTGCCAC
CGCGGCGAAATCCGGAGGGGGCGGTAGGAGTGCGGCTGGGCGAGGGGAAA
ATTCGTCCGCACAGCCGAAAGCCGCATCCGCCAAGCCCTCCAAGGGCAAA
GCTAAGCCGACCCCAGACGCGGAGATTTCCGAGGCTAAAGCTAAGGGGAA
GAAGAAGGAGGCGGCACCGGCGATGCAGCCTGCGGGGGGTCCAGCGCCGC
GCCGCAGCGGGAGGCGGTCGGGGGACGGGGACGAAGAAGCATTCTTTGAC
GCGCGAGAGGATGAAGATGGCGACGGTGAGTTGGAGGCTGTGAAGGTCAC
GTCGGGGGCGGCGGGCAAGGGTGGCGTGTCGCGGAAGGCCGGCACAGGAG
CGTCGAGCGGAGCGGCGGGTGCCCAGAAGAGCGCGCACAGGGGTGCGGCT
GCGCAGAAGGAGTTTGTGCTGAAGCGGGGGACGGGGACGAAGAAGCATTC
TTTGACGCGCGAGAGGATGAAGATGGCGACGGTGAGTTGGAGGCTGTGAA
GGTCACGTCGGGGGCGGCGGGCAAGGGTGGCGTGTCGCGGAAGGCCGGCA
CAGGAGCGTCGAGCGGAGCGGCGGGTGCCCAGAAGAGCGCGCACAGGGGT
GCGGCTGCGCAGAAGGAGTTTGTGCTGAAGGTGTGCGGTGGCCCTCATGA
CGGCCAGAGTCTCAGCTTGGCGCCTGGCGGGGCGGAGGTCCGAGTAGGAC
GCAACGCTCCAAGGAAGAACGGGCTCCGATTGGACAAGGACTTGGAGGTT
TCTGACAAGTGTGCGGTGGCCCTCATGACGGCCAGAGTCTCAGCTTGGCG
CCTGGCGGGGCGGAGGTCCGAGTAGGACGCAACGCTCCAAGGAAGAACGG
GCTCCGATTGGACAAGGACTTGGAGGTTTCTGACAAGCACGCCGTATTGC
GCCCGCAAGCCGACGGTATCCTTTGCGAGGACGTCGGCAGCCTGAACGGG
AGCTTCGTAAACGAGGACAGGCTGGAAGGCGCCGTGGTTCTCAAGAACGG
GGATGTGCTGCAAGTCGGACAATCCGCAGTGCGGGTAACTCGTTAGGCAC
GCCGTATTGCGCCCGCAAGCCGACGGTATCCTTTGCGAGGACGTCGGCAG
CCTGAACGGGAGCTTCGTAAACGAGGACAGGCTGGAAGGCGCCGTGGTTC
TCAAGAACGGGGATGTGCTGCAAGTCGGACAATCCGCAGTGCGGGTAACT
CGTTAG
back to top