mRNA_S-dermatodea_contig12518.1562.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig12518.1562.1 vs. uniprot
Match: D8LCQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCQ2_ECTSI) HSP 1 Score: 411 bits (1057), Expect = 6.400e-137 Identity = 206/255 (80.78%), Postives = 238/255 (93.33%), Query Frame = 1
Query: 1 QVLKGEDEGVVVEFVNPKYKAGSRTDFKKPTRLECMMQDFPKLMSKELGDSAKIGFTSFEKWLTFSPAKNDLESAAAAAADGVPPGTASSAEADFYAQAARRLKTAGRCDLGDAEEVEFAGISLSVGPRVVMLPSFATTTEDLRRKTGPGVKISSRSTLVLEGEGLVLEALDLDGALVVRAAAGARVSVRGLKVANEGWAMVPLPDDVSQVAEEDRVRGYLLEKRATKVIEVSEPGDWIVGVDGDITQVHFEVAE 765
+VLKGEDEGVVVEFVNPKYKAGSRT+FKKPTRLECMMQDFPKLMSKELGD+AKIGFTSF+KWLTFSPAKNDLESAAAAAADGVPPGTASSAE++FYAQAARRL+ A C++G+ E+VEFAG+ LS+GPRVV+ PSFAT+T DLR K G GVKISSRST+VLEGE L LE L+LDGALV++AA GARVSVRGLKV+NEGW MVPLP+D+SQV+EEDRVRGYL+EK+ATK+IEV+EPGDW+VGV+GD++QV F+V E
Sbjct: 459 KVLKGEDEGVVVEFVNPKYKAGSRTEFKKPTRLECMMQDFPKLMSKELGDAAKIGFTSFDKWLTFSPAKNDLESAAAAAADGVPPGTASSAESEFYAQAARRLQMAAGCEVGEPEDVEFAGVPLSMGPRVVLEPSFATSTADLRAKAGRGVKISSRSTIVLEGEDLHLEGLELDGALVIKAAPGARVSVRGLKVSNEGWVMVPLPEDLSQVSEEDRVRGYLIEKKATKLIEVTEPGDWLVGVEGDVSQVRFDVVE 713
BLAST of mRNA_S-dermatodea_contig12518.1562.1 vs. uniprot
Match: A0A7S2Y4M2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y4M2_9STRA) HSP 1 Score: 264 bits (675), Expect = 8.150e-81 Identity = 135/249 (54.22%), Postives = 179/249 (71.89%), Query Frame = 1
Query: 1 QVLKGEDEGVVVEFVNPKYKAGSRTDFKKPTRLECMMQDFPKLMSKELGDSAKIGFTSFEKWLTFSPAKNDLESAAAAAADGVPPGTASSAEADFYAQAARRLKTAGRCDLGDAEEVEFAGISLSVGPRVVMLPSFATTTEDLRRKTGPGVKISSRSTLVLEGEGLVLEALDLDGALVVRAAAGARVSVRGLKVANEGWAMVPLPDDVSQVAEEDRVRGYLLEKRATKVIEVSEPGDWIVGVDGDITQV 747
+VL+GED+GVVVEFVNPKYK +RT FKKP RLE MMQDFPKLMSKELG+ A+IGFT+ +KWL+FSPAKN L++ A A +GVPP T SS EA+ YA AR++K C+LG+ EEVEF G++ +GPR+V+ PSFA T + L++K VKIS+RS+L+LEGEG+ L++LDLDGAL + G ++VR L V N GW L E +VRGY L K T+ ++EPG++++G DG + Q+
Sbjct: 371 KVLEGEDQGVVVEFVNPKYKDEARTLFKKPARLESMMQDFPKLMSKELGNHARIGFTTLDKWLSFSPAKNSLDTGAGNAKNGVPPATVSSGEAENYAATARKMKETTGCELGEPEEVEFEGVTFPLGPRIVLKPSFAVTQDQLKQKISSNVKISTRSSLILEGEGIKLDSLDLDGALSITVEPGVHLTVRDLAVNNAGWKFTELSQS-EHTTPEAQVRGYTLVKEGTQSYHITEPGNYVLGSDGKVVQI 618
BLAST of mRNA_S-dermatodea_contig12518.1562.1 vs. uniprot
Match: A0A7R9VXE0_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VXE0_9STRA) HSP 1 Score: 238 bits (607), Expect = 1.650e-73 Identity = 134/252 (53.17%), Postives = 177/252 (70.24%), Query Frame = 1
Query: 1 QVLKGEDEGVVVEFVNPKYKAGSRTDFKKPTRLECMMQDFPKLMSKELGDSAKIGFTSFEKWLTFSPAKNDLESAAAAAADGV-PPGTASSAEADFYAQAARRLKTAGR-CDLGDAEE-VEFAGISLSVGPRVVMLPSFATTTEDLRRKTGPGVKISSRSTLVLEGEGLVLEALDLDGALVVRAAAGARVSVRGLKVANEGWAMVPLPDDVSQVAEEDRVRGYLLEKRATKVIEVSEPGDWIVGVDGDITQV 747
+ L+GED+GVVVEFVNPKYK +RT+FKKPTRLECMMQD PKL KE+G A IGFT+F++W +FSPAKN LES A G PGT SSAE+D Y Q R+LK AG D+ + E+ V AGI ++ GPRV++ P FA T E++ K G KI++RS+LVLEGEGLV++ LDLDGALV+R V+V GL V N+G+ + +P+ + V EE +RGY + KR I ++EPG + VG DG++T++
Sbjct: 117 KTLRGEDQGVVVEFVNPKYKDDTRTEFKKPTRLECMMQDIPKLFQKEMGSDANIGFTNFDRWFSFSPAKNSLESGVDAVKGGSNAPGTMSSAESDKYVQNQRKLKFAGMDIDVTEEEDLVSVAGIPITPGPRVILCPGFAITQEEIMNKISGG-KITTRSSLVLEGEGLVVKDLDLDGALVIRTGHDCSVTVDGLVVRNQGYEIETVPEG-ADVPEEVAIRGYTMAKREVMEIIITEPGKYSVGKDGEVTKL 366
BLAST of mRNA_S-dermatodea_contig12518.1562.1 vs. uniprot
Match: A0A836CDZ7_9STRA (Nucleotide-diphospho-sugar transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDZ7_9STRA) HSP 1 Score: 236 bits (601), Expect = 1.990e-68 Identity = 138/261 (52.87%), Postives = 165/261 (63.22%), Query Frame = 1
Query: 1 QVLKGEDEGVVVEFVNPKYKAGSRTDFKKPTRLECMMQDFPKLMSKELGDSA-KIGFTSFEKWLTFSPAKNDLESAAAAAADGVPPGTASSAEADFYAQAARRLKTAGRCDLGDAEEVEFAGISLSVGPRVVMLPSFATTTEDLRRKTGPGVKISSRSTLVLEGEGLVLEALDLDG------------------------------ALVVRAAAGARVSVRGLKVANEGWAMVPLPDDVSQVAEEDRVRGYLLEKRATKVI 690
+ L+G+DEGVVVEFVNPKYK SRT FKKPTRLECMMQDFPKLM++EL S IGFTS EKWL+FSPAKN LE+ AA A GVPP TASSAEA+FYAQ RR+ G +EF G+ L +GP +V+ PSFA TT D+RRK G VK+S+ S LVLEG G+ +E+ ALV++A ARV+V GL V NEGW PLP + V E DRVRG++L+KRA VI
Sbjct: 436 KTLQGKDEGVVVEFVNPKYKDASRTAFKKPTRLECMMQDFPKLMAQELDQSDFTIGFTSLEKWLSFSPAKNSLEAGAAGAPSGVPPNTASSAEAEFYAQNVRRVAATAGAAFGAPRHIEFEGVPLDLGPLLVLSPSFAITTNDIRRKFGKDVKVSTTSALVLEGPGITVESXXXXXXXXXXXXXXXXXEAHRTGSSXXXXXXXXXXALVIKACEDARVTVHGLTVRNEGWHPAPLPAE--GVPEVDRVRGFVLDKRAATVI 694
BLAST of mRNA_S-dermatodea_contig12518.1562.1 vs. uniprot
Match: A0A7S2MCW7_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MCW7_9STRA) HSP 1 Score: 231 bits (590), Expect = 2.620e-67 Identity = 129/253 (50.99%), Postives = 165/253 (65.22%), Query Frame = 1
Query: 1 QVLKGEDEGVVVEFVNPKYKAGSRTDFKKPTRLECMMQDFPKLMSKELGDSAKIGFTSFEKWLTFSPAKNDLESAAAAAADG-VPPGTASSAEADFYAQAARRLKTAGR--CDLGDAEEVEFAGISLSVGPRVVMLPSFATTTEDLRRKTGPGVKISSRSTLVLEGEGLVLEALDLDGALVVRAAAGARVSVRGLKVANEGWAMVPLPDDVSQVAEEDRVRGYLLEKRATKVIEVSEPGDWIVGVDGDITQVH 750
+ L+GED+GVVVEFVNPKYK +RTDFKKPTRLECMMQD PKL KELG A IGFT F++W TFSPAKN LES A +G PGT SSAE+D Y Q R+LK AG C + + V GI ++ GPR+++ P FA T +++ K G I+ RS+LVLEGEGL ++ L LDGALV+R V V GL V N+GW + +PD + V E +RGY + K I ++EPG + +G DG + +V
Sbjct: 498 KTLRGEDQGVVVEFVNPKYKDDTRTDFKKPTRLECMMQDIPKLFQKELGSEANIGFTMFDRWFTFSPAKNSLESGIEAVQNGNTAPGTMSSAESDKYVQNQRKLKYAGMDVCITEEKDLVSVGGIPVTPGPRIIICPGFAITKQEILAKVEGG-SITDRSSLVLEGEGLKVKNLQLDGALVIRTGHDCEVEVDGLVVKNKGWELEEIPDG-ADVPETVSIRGYTMAKHEAMEIHINEPGKYTIGPDGVVNKVE 748
BLAST of mRNA_S-dermatodea_contig12518.1562.1 vs. uniprot
Match: K0R2Q4_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R2Q4_THAOC) HSP 1 Score: 228 bits (580), Expect = 3.060e-66 Identity = 128/250 (51.20%), Postives = 170/250 (68.00%), Query Frame = 1
Query: 7 LKGEDEGVVVEFVNPKYKAGSRTDFKKPTRLECMMQDFPKLMSKELGDSAKIGFTSFEKWLTFSPAKNDLESAAA-AAADGVPPGTASSAEADFYAQAARRLKTAG-RCDLGDAEE-VEFAGISLSVGPRVVMLPSFATTTEDLRRKTGPGVKISSRSTLVLEGEGLVLEALDLDGALVVRAAAGARVSVRGLKVANEGWAMVPLPDDVSQVAEEDRVRGYLLEKRATKVIEVSEPGDWIVGVDGDITQV 747
L GED+GVV+EFVNPKYK +RT+FKKPTRLECMMQD PKL KE+G A IGFT+F++W TFSPAKN L++ + G PGT SSAE+D Y Q R+LK AG D+ + E+ V AGI ++ GPRV++ P FA T ++ K G +I+ RS LVLEGEGL ++ LDLDGAL++R G V+V GL V NEG+ +P+ + V EE +RGY + KR I ++EPG + +G DG +T++
Sbjct: 445 LNGEDKGVVIEFVNPKYKDDTRTEFKKPTRLECMMQDIPKLFQKEMGSDASIGFTTFDRWFTFSPAKNSLDAGVDHCSGGGNAPGTMSSAESDKYIQNQRKLKFAGMEIDVTEDEDLVPVAGIPITPGPRVILCPGFAITQREVVEKIEGG-RITQRSALVLEGEGLKVKNLDLDGALIIRTGHGCDVTVDGLVVRNEGYVAEEIPEG-ADVPEEVAIRGYTMNKREATEIIITEPGKYTIGKDGVVTKI 692
BLAST of mRNA_S-dermatodea_contig12518.1562.1 vs. uniprot
Match: B8CC52_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CC52_THAPS) HSP 1 Score: 223 bits (567), Expect = 5.210e-65 Identity = 126/253 (49.80%), Postives = 170/253 (67.19%), Query Frame = 1
Query: 1 QVLKGEDEGVVVEFVNPKYKAGSRTDFKKPTRLECMMQDFPKLMSKELGDSAKIGFTSFEKWLTFSPAKNDLESAAA-AAADGVPPGTASSAEADFYAQAARRLKTAGRCDLGDAEE---VEFAGISLSVGPRVVMLPSFATTTEDLRRKTGPGVKISSRSTLVLEGEGLVLEALDLDGALVVRAAAGARVSVRGLKVANEGWAMVPLPDDVSQVAEEDRVRGYLLEKRATKVIEVSEPGDWIVGVDGDITQV 747
+ L+GED+GVV+EFVNPKYK +RT+FKKPTRLECMMQD PKL KE+G A IGFT F++W TFSPAKN L++ G PGT SSAE+D Y Q R+LK AG D+ EE V +GI ++ GPR+++ P FA T +++ K G KI+ RSTLVLEGE L ++ LDLDGAL++R V+V GL V N+G+ + +P+ S V EE +RGY ++K I ++EPG + VG DG++ ++
Sbjct: 358 RTLRGEDQGVVIEFVNPKYKDDARTEFKKPTRLECMMQDIPKLFQKEMGSEANIGFTMFDRWFTFSPAKNSLDAGVEDVKKGGKAPGTMSSAESDKYIQNQRKLKFAG-VDVPVTEEKDLVSISGIPVTPGPRIILCPGFAITQQEVVEKMEGG-KITQRSTLVLEGEDLKVKNLDLDGALIIRTGHDCNVTVDGLVVRNKGFELEEVPEG-SDVPEEVAIRGYTMKKEEVMEIIINEPGKYHVGADGEVKKL 607
BLAST of mRNA_S-dermatodea_contig12518.1562.1 vs. uniprot
Match: A0A7S0C779_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C779_9STRA) HSP 1 Score: 221 bits (564), Expect = 1.640e-64 Identity = 121/253 (47.83%), Postives = 173/253 (68.38%), Query Frame = 1
Query: 1 QVLKGEDEGVVVEFVNPKYKAGSRTDFKKPTRLECMMQDFPKLMSKELGDSAKIGFTSFEKWLTFSPAKNDLESAAAAAADG-VPPGTASSAEADFYAQAARRLKTAGRCDLGDAEE---VEFAGISLSVGPRVVMLPSFATTTEDLRRKTGPGVKISSRSTLVLEGEGLVLEALDLDGALVVRAAAGARVSVRGLKVANEGWAMVPLPDDVSQVAEEDRVRGYLLEKRATKVIEVSEPGDWIVGVDGDITQV 747
+ LKGEDEGVVVEFVNPKYK +RT+FKKPTRLECMMQDFPKL+ KE+G A +GFT ++WLTFSPAKN LE+ + +G PGT SSAE++ Y Q R+L+ AG L EE V +GI+++ GPR+++ PSF+ + ++ + K G I+ +S+L+LEG GL+++ LDLDGAL++R V+V GLKV N+GW + ++ S + E +RGY + + TK I + +PG + +G DG + ++
Sbjct: 365 KTLKGEDEGVVVEFVNPKYKDETRTEFKKPTRLECMMQDFPKLLQKEMGKEANVGFTMLDRWLTFSPAKNSLEAGVESCKNGSTAPGTMSSAESEKYIQNQRKLRHAG-VSLPVTEEDDLVLVSGITVTPGPRIILAPSFSVSQKETKEKIQGG-SITEKSSLILEGGGLIVKNLDLDGALIIRTGPSCEVTVDGLKVQNKGWVLEENSEN-SDLPESVAIRGYTMRRYETKEIIIEDPGRYFIGEDGVVNKL 614
BLAST of mRNA_S-dermatodea_contig12518.1562.1 vs. uniprot
Match: A0A4D9D7Z1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7Z1_9STRA) HSP 1 Score: 219 bits (559), Expect = 2.860e-64 Identity = 124/256 (48.44%), Postives = 171/256 (66.80%), Query Frame = 1
Query: 1 QVLKGEDEGVVVEFVNPKYKAGSRTDFKKPTRLECMMQDFPKLMSKELGDSAKIGFTSFEKWLTFSPAKNDLESAAAA-AADGVPPGTASSAEADFYAQAARRLKTAG----RCDLGDAEEVEFAGISLSVGPRVVMLPSFATTTEDLRRKTGPG-VKISSRSTLVLEGEGLVLEALDLDGALVVRAAAGARVSVRGLKVANEGWAMVPLPDDVSQVAEEDRVRGYLLEKRATKVIEVS--EPGDWIVGVDGDITQ 744
+VL+GE +GVV EFVNPK+K SRT F KPTRLECMMQDFPKL++KE+G A++GFTSFEKWL+FSPAKN LE+ A A AA GVPP TASSAE DFY +++ +L D FA I L GPR+++ P+ A T+++L + G G + ++ STLVL+G G+ +E+LDLDG ++RA ARV+VR KV N GW + P D AEE+ +RG+ + K V+++ GD++V +G++ +
Sbjct: 305 RVLQGEAQGVVEEFVNPKFKDSSRTAFTKPTRLECMMQDFPKLLAKEIGGKARVGFTSFEKWLSFSPAKNSLEAGAKAFAATGVPPATASSAEMDFYRAHLLKIRAVSGSRAAANLLDGPISSFADIPLETGPRIIVTPAVAVTSKELHDRVGKGRISVTGTSTLVLDGAGISVESLDLDGTFILRAGPRARVTVRDAKVRNAGWCLAPAGPDA---AEEEGIRGFRVIKDNGVVVDLGMDAEGDFLVTGNGEVVK 557
BLAST of mRNA_S-dermatodea_contig12518.1562.1 vs. uniprot
Match: W7UBR1_9STRA (UDPglucose pyrophosphorylase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBR1_9STRA) HSP 1 Score: 219 bits (558), Expect = 8.510e-63 Identity = 123/256 (48.05%), Postives = 171/256 (66.80%), Query Frame = 1
Query: 1 QVLKGEDEGVVVEFVNPKYKAGSRTDFKKPTRLECMMQDFPKLMSKELGDSAKIGFTSFEKWLTFSPAKNDLESAAAA-AADGVPPGTASSAEADFYAQAARRLKTAG----RCDLGDAEEVEFAGISLSVGPRVVMLPSFATTTEDLRRKTGPG-VKISSRSTLVLEGEGLVLEALDLDGALVVRAAAGARVSVRGLKVANEGWAMVPLPDDVSQVAEEDRVRGYLLEKRATKVIEVS--EPGDWIVGVDGDITQ 744
+VL+GE +GVV EFVNPK+K SRT F KPTRLECMMQDFPKL++KE+G A++GFTSFEKWL+FSPAKN LE+ A A AA GVPP TASSAE DFY +++ +L D FA I L GPR+++ P+ A T+++L + G G + ++ STLVL+G G+ +E+LDLDG ++RA ARV+VR KV N GW + P D EE+R+RG+ + K V+++ G+++V +G++ +
Sbjct: 478 RVLQGEAQGVVEEFVNPKFKDSSRTAFTKPTRLECMMQDFPKLLAKEIGGKARVGFTSFEKWLSFSPAKNSLEAGAKAFAATGVPPATASSAEMDFYRAHLLKIRAVSGSRAAANLLDGPISSFADIPLETGPRIIVTPAVAVTSKELHDRVGKGRISVTGTSTLVLDGAGISVESLDLDGTFILRAGPRARVTVRDAKVRNAGWCLAPAGPDA---VEEERIRGFRVIKDNGVVVDLGMDAEGEFLVTGNGEVVK 730 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12518.1562.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig12518.1562.1 >prot_S-dermatodea_contig12518.1562.1 ID=prot_S-dermatodea_contig12518.1562.1|Name=mRNA_S-dermatodea_contig12518.1562.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=226bp MMQDFPKLMSKELGDSAKIGFTSFEKWLTFSPAKNDLESAAAAAADGVPPback to top mRNA from alignment at S-dermatodea_contig12518:1897..7006- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig12518.1562.1 ID=mRNA_S-dermatodea_contig12518.1562.1|Name=mRNA_S-dermatodea_contig12518.1562.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5110bp|location=Sequence derived from alignment at S-dermatodea_contig12518:1897..7006- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig12518:1897..7006- >mRNA_S-dermatodea_contig12518.1562.1 ID=mRNA_S-dermatodea_contig12518.1562.1|Name=mRNA_S-dermatodea_contig12518.1562.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1356bp|location=Sequence derived from alignment at S-dermatodea_contig12518:1897..7006- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |