mRNA_S-dermatodea_contig12499.1550.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig12499.1550.1
Unique NamemRNA_S-dermatodea_contig12499.1550.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig12499.1550.1 vs. uniprot
Match: D7G335_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G335_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 8.930e-36
Identity = 61/72 (84.72%), Postives = 66/72 (91.67%), Query Frame = 1 
Query:    1 QGPEADLWALGCCVYQFLSGVTPYHAPSPYLCFLRIKKGTFRCPKVLPDDATDLITRLLRRNPADRLGAGPI 216
            QG EADLWALGCCVYQFL G TP+HAPSPYLCFLRIKKG FRCP+VLPDDATDL+ RLLRRNP+ RLGAGP+
Sbjct:  413 QGREADLWALGCCVYQFLVGFTPFHAPSPYLCFLRIKKGVFRCPEVLPDDATDLVKRLLRRNPSSRLGAGPL 484
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BLAST of mRNA_S-dermatodea_contig12499.1550.1 vs. uniprot
Match: A0A835ZFF7_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFF7_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.520e-26
Identity = 50/69 (72.46%), Postives = 58/69 (84.06%), Query Frame = 1 
Query:    1 QGPEADLWALGCCVYQFLSGVTPYHAPSPYLCFLRIKKGTFRCPKVLPDDATDLITRLLRRNPADRLGA 207
            QG EADLWA+GCC+YQFL G TP+HAPSPYLCFLRIKKGT R P+++P  A DLIT LLR+ PA RLG+
Sbjct:  410 QGREADLWAVGCCIYQFLVGQTPFHAPSPYLCFLRIKKGTVRFPRIVPPVAVDLITVLLRKKPAARLGS 478
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BLAST of mRNA_S-dermatodea_contig12499.1550.1 vs. uniprot
Match: A0A4D9CZ89_9STRA (Protein kinase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZ89_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.120e-19
Identity = 41/66 (62.12%), Postives = 51/66 (77.27%), Query Frame = 1 
Query:   10 EADLWALGCCVYQFLSGVTPYHAPSPYLCFLRIKKGTFRCPKVLPDDATDLITRLLRRNPADRLGA 207
            EADLWALGCC+YQFL GV+P+ AP+PYL FLR ++   R P V+P  A DLI +LLRR P +RLG+
Sbjct:  246 EADLWALGCCLYQFLVGVSPFRAPAPYLVFLRSRRCCLRFPAVVPPHARDLILKLLRRRPQERLGS 311
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BLAST of mRNA_S-dermatodea_contig12499.1550.1 vs. uniprot
Match: A0A1V9ZC25_9STRA (3-phosphoinositide-dependent protein kinase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZC25_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.050e-16
Identity = 36/64 (56.25%), Postives = 48/64 (75.00%), Query Frame = 1 
Query:   16 DLWALGCCVYQFLSGVTPYHAPSPYLCFLRIKKGTFRCPKVLPDDATDLITRLLRRNPADRLGA 207
            DLWALGC ++Q L+G TP+   SPYLCFL+++ GTF  P  L  +A D+I +LL+ NPA+RLGA
Sbjct:  207 DLWALGCIIHQLLTGDTPFQGGSPYLCFLKVQAGTFDLPGFLSQEAKDIIVKLLKPNPAERLGA 270
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BLAST of mRNA_S-dermatodea_contig12499.1550.1 vs. uniprot
Match: A0A6G0X561_9STRA (Protein kinase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X561_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.720e-15
Identity = 34/62 (54.84%), Postives = 47/62 (75.81%), Query Frame = 1 
Query:   13 ADLWALGCCVYQFLSGVTPYHAPSPYLCFLRIKKGTFRCPKVLPDDATDLITRLLRRNPADR 198
            +DLWALGC +YQF +G TP+   SPYL FLR+K G+F  P  +P+DA DLI++LL++ P+ R
Sbjct:  206 SDLWALGCIIYQFFTGETPFQGGSPYLTFLRVKAGSFDLPDFVPNDARDLISQLLQKEPSAR 267
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BLAST of mRNA_S-dermatodea_contig12499.1550.1 vs. uniprot
Match: A0A1V9YC75_9STRA (3-phosphoinositide-dependent protein kinase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YC75_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.740e-15
Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 1 
Query:   13 ADLWALGCCVYQFLSGVTPYHAPSPYLCFLRIKKGTFRCPKVLPDDATDLITRLLRRNPADRLGA 207
            +DLWALGC +YQ L+G TP+   SPYLCFL+++ G +  P  L D+A DLI +LL+  P  RLGA
Sbjct:  274 SDLWALGCVLYQLLTGDTPFQGGSPYLCFLKVQAGVYDLPPFLSDEARDLIAQLLQPTPTQRLGA 338
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BLAST of mRNA_S-dermatodea_contig12499.1550.1 vs. uniprot
Match: A0A061RUV1_9CHLO (3-phosphoinositide dependent protein kinase-1 (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RUV1_9CHLO)

HSP 1 Score: 76.6 bits (187), Expect = 3.450e-15
Identity = 35/65 (53.85%), Postives = 45/65 (69.23%), Query Frame = 1 
Query:   13 ADLWALGCCVYQFLSGVTPYHAPSPYLCFLRIKKGTFRCPKVLPDDATDLITRLLRRNPADRLGA 207
            ADLWALGCCV+Q L+G  P+ A S YL F R+  G+F  P   P  A DL+ RLL+ +P++RLGA
Sbjct:   34 ADLWALGCCVFQMLTGSPPFRAASEYLTFERVVAGSFEFPDGFPPVAADLVGRLLKLDPSERLGA 98
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BLAST of mRNA_S-dermatodea_contig12499.1550.1 vs. uniprot
Match: A0A024FYX7_9STRA (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FYX7_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 4.530e-15
Identity = 37/65 (56.92%), Postives = 45/65 (69.23%), Query Frame = 1 
Query:   16 DLWALGCCVYQFLSGVTPYHAPSPYLCFLRIKKGTFRCPKVLPDDATDLITRLLRRNPADRLGAG 210
            DLWALGC +YQ L+G TPY A S YL  LRIK+GTF  P  + D+  DLI +LL R+P  R+G G
Sbjct:  217 DLWALGCILYQLLTGETPYGAGSVYLTLLRIKEGTFDIPSFITDEPRDLIEKLLTRDPNQRIGGG 281
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BLAST of mRNA_S-dermatodea_contig12499.1550.1 vs. uniprot
Match: K3WPX8_GLOUD (Protein kinase domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPX8_GLOUD)

HSP 1 Score: 79.0 bits (193), Expect = 8.200e-15
Identity = 34/66 (51.52%), Postives = 49/66 (74.24%), Query Frame = 1 
Query:   13 ADLWALGCCVYQFLSGVTPYHAPSPYLCFLRIKKGTFRCPKVLPDDATDLITRLLRRNPADRLGAG 210
            +DLWALGC V+Q  +G TP+   S YL FL+++ G+F  P+ L D+A DLIT+LL+++P  RLG+G
Sbjct:  203 SDLWALGCIVFQLCTGETPFSGGSAYLTFLKVQDGSFHLPEYLSDEAKDLITKLLQKDPKARLGSG 268
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BLAST of mRNA_S-dermatodea_contig12499.1550.1 vs. uniprot
Match: F0WUK3_9STRA (3phosphoinositidedependent protein kinase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WUK3_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.520e-14
Identity = 37/65 (56.92%), Postives = 46/65 (70.77%), Query Frame = 1 
Query:   16 DLWALGCCVYQFLSGVTPYHAPSPYLCFLRIKKGTFRCPKVLPDDATDLITRLLRRNPADRLGAG 210
            DLWALGC +YQ L+G TP+ A S YL  LRIK+G F  P  + D A DLI +LL R+P +R+GAG
Sbjct:  223 DLWALGCILYQLLTGETPFGAGSIYLTLLRIKEGEFDIPCFISDQARDLIEKLLNRHPNERIGAG 287
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12499.1550.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G335_ECTSI8.930e-3684.72Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A835ZFF7_9STRA1.520e-2672.46Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A4D9CZ89_9STRA2.120e-1962.12Protein kinase domain-containing protein n=3 Tax=M... [more]
A0A1V9ZC25_9STRA1.050e-1656.253-phosphoinositide-dependent protein kinase (Fragm... [more]
A0A6G0X561_9STRA1.720e-1554.84Protein kinase domain-containing protein n=1 Tax=A... [more]
A0A1V9YC75_9STRA1.740e-1553.853-phosphoinositide-dependent protein kinase n=1 Ta... [more]
A0A061RUV1_9CHLO3.450e-1553.853-phosphoinositide dependent protein kinase-1 (Fra... [more]
A0A024FYX7_9STRA4.530e-1556.92tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
K3WPX8_GLOUD8.200e-1551.52Protein kinase domain-containing protein n=1 Tax=G... [more]
F0WUK3_9STRA1.520e-1456.923phosphoinositidedependent protein kinase putative... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12499contigS-dermatodea_contig12499:1115..2042 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score139.0
Seed ortholog evalue1.3e-30
Seed eggNOG ortholog2880.D7G335
KEGG rclassRC00438,RC00439,RC00603,RC00604
KEGG koko:K01623,ko:K06276,ko:K08282
KEGG ReactionR01068,R01070,R01829,R02568
KEGG Pathwayko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01524,ko03320,ko04011,ko04068,ko04071,ko04140,ko04150,ko04151,ko04152,ko04210,ko04510,ko04660,ko04664,ko04722,ko04910,ko04919,ko04931,ko04960,ko05145,ko05160,ko05205,ko05213,ko05215,ko05223,ko05231,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map01524,map03320,map04011,map04068,map04071,map04140,map04150,map04151,map04152,map04210,map04510,map04660,map04664,map04722,map04910,map04919,map04931,map04960,map05145,map05160,map05205,map05213,map05215,map05223,map05231
KEGG ModuleM00001,M00003,M00165,M00167
EggNOG free text desc.3-phosphoinositide-dependent protein kinase activity
EggNOG OGsKOG0592@1,KOG0592@2759
EC2.7.11.1,4.1.2.13
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03036,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Exons2
Model size337
Cds size336
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924250.2151427-CDS-S-dermatodea_contig12499:1114..12391622924250.2151427-CDS-S-dermatodea_contig12499:1114..1239Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12499 1115..1239 +
1694079124.7826812-CDS-S-dermatodea_contig12499:1114..12391694079124.7826812-CDS-S-dermatodea_contig12499:1114..1239Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12499 1115..1239 +
1622924250.2246284-CDS-S-dermatodea_contig12499:1831..20421622924250.2246284-CDS-S-dermatodea_contig12499:1831..2042Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12499 1832..2042 +
1694079124.801089-CDS-S-dermatodea_contig12499:1831..20421694079124.801089-CDS-S-dermatodea_contig12499:1831..2042Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12499 1832..2042 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12499.1550.1prot_S-dermatodea_contig12499.1550.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig12499 1115..2042 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig12499.1550.1

>prot_S-dermatodea_contig12499.1550.1 ID=prot_S-dermatodea_contig12499.1550.1|Name=mRNA_S-dermatodea_contig12499.1550.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=112bp
QGPEADLWALGCCVYQFLSGVTPYHAPSPYLCFLRIKKGTFRCPKVLPDD
ATDLITRLLRRNPADRLGAGPIPSAPTSSSLQSDSGAPTAVLPTASVAGS
GGGLAGSCGDDG
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mRNA from alignment at S-dermatodea_contig12499:1115..2042+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig12499.1550.1 ID=mRNA_S-dermatodea_contig12499.1550.1|Name=mRNA_S-dermatodea_contig12499.1550.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=928bp|location=Sequence derived from alignment at S-dermatodea_contig12499:1115..2042+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CAGGGCCCGGAGGCGGATCTCTGGGCCTTGGGGTGCTGCGTTTACCAGTT
CCTGTCGGGTGTAACTCCATATCACGCCCCCAGCCCCTACCTGTGTTTCC
TGCGGATCAAGAAGGGCACGTTCAGGTGTGTATCGTGTACAGGAGGCGTG
TTTTGTGTAGGTATGCATTGTGTAGGTGTGTTTAGTAGGCGTGTGTTGTG
TAGGTGTGTTTTGTGTAGGCGTGTGTTGTGCAGGTGTGTGCTGTGTACGT
GAGTATTTGTTATTAATAGGTCGTGTGCAGTATTGTACGTGTATTGTGTA
TTGTGTAGGTGTGTTGAATATACAAGCATGTATTGTGTAGGTGTATTATG
TGTGTGTGTGTTGTATAGGGGTGTACTGTGAAGGTGTGTGTTGCATGTGT
TGTGTGTTGTGTATTGTGTAGGTGTGTGTTGTATAGATATATGGTCATGG
AGGTGTGTGTGTGGTATCGGTGGGTGTGTTTTAGGTGCATGTAATATACA
GGTGAGAAATGTACTGTATTTAGTATATATAACAGTAGGTATATATGTAT
CGTACAGTATCTCGCGGGTGTTTGGTTTTTAGTGTTTACTGCCTGATGGT
GAACCTGTTGGCCCCCATAGCATTTTTTGCGCTGTGACCGTCCCAAACGA
CGCCTCGGTGATGGATACCCCCTCCCCAACCACCCATGCCCCCATCCACC
ATCCACGCATCACCCAGATGTCCGAAGGTGCTCCCCGACGACGCGACAGA
CCTAATAACACGCCTCTTGAGGAGAAACCCCGCCGATCGGCTAGGAGCGG
GCCCAATTCCCTCGGCGCCCACCTCCTCCTCTCTCCAGAGCGACAGCGGT
GCGCCTACCGCGGTATTACCGACGGCATCAGTGGCAGGATCGGGCGGCGG
GTTGGCCGGGAGTTGTGGAGATGATGGG
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Coding sequence (CDS) from alignment at S-dermatodea_contig12499:1115..2042+

>mRNA_S-dermatodea_contig12499.1550.1 ID=mRNA_S-dermatodea_contig12499.1550.1|Name=mRNA_S-dermatodea_contig12499.1550.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=672bp|location=Sequence derived from alignment at S-dermatodea_contig12499:1115..2042+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CAGGGCCCGGAGGCGGATCTCTGGGCCTTGGGGTGCTGCGTTTACCAGTT
CCTGTCGGGTGTAACTCCATATCACGCCCCCAGCCCCTACCTGTGTTTCC
TGCGGATCAAGAAGGGCACGTTCAGCAGGGCCCGGAGGCGGATCTCTGGG
CCTTGGGGTGCTGCGTTTACCAGTTCCTGTCGGGTGTAACTCCATATCAC
GCCCCCAGCCCCTACCTGTGTTTCCTGCGGATCAAGAAGGGCACGTTCAG
ATGTCCGAAGGTGCTCCCCGACGACGCGACAGACCTAATAACACGCCTCT
TGAGGAGAAACCCCGCCGATCGGCTAGGAGCGGGCCCAATTCCCTCGGCG
CCCACCTCCTCCTCTCTCCAGAGCGACAGCGGTGCGCCTACCGCGGTATT
ACCGACGGCATCAGTGGCAGGATCGGGCGGCGGGTTGGCCGGGAGTTGTG
GAGATGATGGGATGTCCGAAGGTGCTCCCCGACGACGCGACAGACCTAAT
AACACGCCTCTTGAGGAGAAACCCCGCCGATCGGCTAGGAGCGGGCCCAA
TTCCCTCGGCGCCCACCTCCTCCTCTCTCCAGAGCGACAGCGGTGCGCCT
ACCGCGGTATTACCGACGGCATCAGTGGCAGGATCGGGCGGCGGGTTGGC
CGGGAGTTGTGGAGATGATGGG
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