mRNA_S-dermatodea_contig12496.1549.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig12496.1549.1 vs. uniprot
Match: A0A6H5JBZ5_9PHAE (DOMON domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBZ5_9PHAE) HSP 1 Score: 129 bits (323), Expect = 8.560e-34 Identity = 70/100 (70.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query: 1 AVLSPALAVDTYYATAVSNRSPFFKLPVDGVQRGRDHGLPTYNGAREAYNLTAAADFSDVTSDADLSALLSAAYDGDIDTLDAITGGLAEDT-LSTGGIF 297
AVLSPAL VD YY+ VSN SP FKLPVDGVQRGRDHGLP+YN AREAY L A F DV+ DADL++ LS AY GDID LDA TG LAE T STGG+
Sbjct: 17 AVLSPALTVDAYYSPVVSNLSPLFKLPVDGVQRGRDHGLPSYNAAREAYGLDPATTFEDVSDDADLASRLSDAYGGDIDGLDAFTGALAEGTDSSTGGVL 116
BLAST of mRNA_S-dermatodea_contig12496.1549.1 vs. uniprot
Match: D7FQW8_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW8_ECTSI) HSP 1 Score: 127 bits (320), Expect = 3.660e-32 Identity = 69/100 (69.00%), Postives = 77/100 (77.00%), Query Frame = 1
Query: 1 AVLSPALAVDTYYATAVSNRSPFFKLPVDGVQRGRDHGLPTYNGAREAYNLTAAADFSDVTSDADLSALLSAAYDGDIDTLDAITGGLAEDT-LSTGGIF 297
AVLSPAL VD YY+ VSN SP FKLPVDGVQRGRDHGLP+YNGAREA+ L A F DV+ DADL++ LS AY GDI+ LDA TG LAE T STGG+
Sbjct: 284 AVLSPALTVDAYYSPVVSNLSPLFKLPVDGVQRGRDHGLPSYNGAREAFGLDPATTFEDVSDDADLASRLSDAYGGDINGLDAFTGALAEGTHSSTGGVL 383
BLAST of mRNA_S-dermatodea_contig12496.1549.1 vs. uniprot
Match: D7G7J1_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J1_ECTSI) HSP 1 Score: 124 bits (310), Expect = 8.230e-31 Identity = 68/100 (68.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query: 1 AVLSPALAVDTYYATAVSNRSPFFKLPVDGVQRGRDHGLPTYNGAREAYNLTAAADFSDVTSDADLSALLSAAYDGDIDTLDAITGGLAEDT-LSTGGIF 297
AVLSPA+AV +YA+AVSN SP FKLPVD VQRGRDHG+P+YN R AY L A DFSDV+SD D+ LL AAY G+ID LDA TG LAED S GGIF
Sbjct: 317 AVLSPAMAVGAHYASAVSNASPLFKLPVDMVQRGRDHGVPSYNDVRGAYGLPEATDFSDVSSDGDVVQLLDAAYGGEIDNLDACTGALAEDKEASLGGIF 416
BLAST of mRNA_S-dermatodea_contig12496.1549.1 vs. uniprot
Match: D8LFE6_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE6_ECTSI) HSP 1 Score: 114 bits (284), Expect = 2.660e-27 Identity = 67/116 (57.76%), Postives = 77/116 (66.38%), Query Frame = 1
Query: 1 AVLSPALAVDTYYATAVSNRSPFFKLPVDGVQRGRDHGLPTYNGAREAYNLTAAADFSDVT----------------SDADLSALLSAAYDGDIDTLDAITGGLAEDTL-STGGIF 297
AVLSP LA ++Y+ TAVSN SP FKLPVD VQRGRDH LPTYN AR+A+ L A FSDVT SD ++ +LSAAY GDI TLDA+TG LAE L S+GG F
Sbjct: 393 AVLSPVLAANSYFTTAVSNGSPLFKLPVDAVQRGRDHALPTYNDARQAFGLDVATTFSDVTTSXXXXXXXXXXXXXDSDELVATILSAAYGGDISTLDAVTGALAEPMLTSSGGFF 508
BLAST of mRNA_S-dermatodea_contig12496.1549.1 vs. uniprot
Match: D7FX03_ECTSI (Peroxinectin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX03_ECTSI) HSP 1 Score: 110 bits (276), Expect = 2.890e-26 Identity = 66/122 (54.10%), Postives = 79/122 (64.75%), Query Frame = 1
Query: 1 AVLSPALAVDTYYATAVSNRSPFFKLPVDGVQRGRDHGLPTYNGAREAYNLTAAADFSDVT--------------------SDAD--LSALLSAAYDGDIDTLDAITGGLAEDTL-STGGIF 297
AVLSP A DT+Y AVSN SP FKLPVD VQRGRDHGLPTYN AR A+ L+ A F+DVT SDAD ++ +LS AY G++ TLDA+TG LAE T+ S+GG+F
Sbjct: 473 AVLSPVYAADTHYTAAVSNGSPLFKLPVDSVQRGRDHGLPTYNDARAAFGLSEATTFTDVTTXXXXXXXXXXXXXXXXXXGSDADEEVADILSTAYGGNVSTLDAVTGALAEPTMASSGGVF 594
BLAST of mRNA_S-dermatodea_contig12496.1549.1 vs. uniprot
Match: A0A6H5JBL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL8_9PHAE) HSP 1 Score: 110 bits (275), Expect = 4.380e-26 Identity = 66/120 (55.00%), Postives = 78/120 (65.00%), Query Frame = 1
Query: 1 AVLSPALAVDTYYATAVSNRSPFFKLPVDGVQRGRDHGLPTYNGAREAYNLTAAADFSDVT------------------SDAD--LSALLSAAYDGDIDTLDAITGGLAEDTL-STGGIF 297
AVLSP A DT+Y AVSN SP FKLPVD VQRGRDHGLPTYN AR A+ L+ A F+DVT SDAD ++ +LS AY G++ TLDA+TG LAE T+ S+GG F
Sbjct: 504 AVLSPVYAADTHYTAAVSNGSPLFKLPVDSVQRGRDHGLPTYNDARAAFGLSEATTFTDVTTSXXXXXXXXXXXXXXXGSDADEEVADILSTAYGGNVSTLDAVTGALAEPTMASSGGFF 623
BLAST of mRNA_S-dermatodea_contig12496.1549.1 vs. uniprot
Match: A0A6H5JQ31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ31_9PHAE) HSP 1 Score: 108 bits (271), Expect = 1.500e-25 Identity = 61/100 (61.00%), Postives = 73/100 (73.00%), Query Frame = 1
Query: 1 AVLSPALAVDTYYATAVSNRSPFFKLPVDGVQRGRDHGLPTYNGAREAYNLTAAADFSDVTSDADLSALLSAAYDGDIDTLDAITGGLAEDT-LSTGGIF 297
AVLSPA+AV +YA+AVSN SP FKLPVD VQR RDHG+P+YN REAY+L A SDV++D D+ LL AAY G+I+ LDA G LAE+ S GG F
Sbjct: 302 AVLSPAMAVGAHYASAVSNASPLFKLPVDMVQRARDHGVPSYNDVREAYDLPKATAMSDVSADDDVVELLYAAYGGEIENLDACVGALAEEKEASLGGNF 401
BLAST of mRNA_S-dermatodea_contig12496.1549.1 vs. uniprot
Match: D7G7J2_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J2_ECTSI) HSP 1 Score: 108 bits (270), Expect = 2.060e-25 Identity = 61/100 (61.00%), Postives = 74/100 (74.00%), Query Frame = 1
Query: 1 AVLSPALAVDTYYATAVSNRSPFFKLPVDGVQRGRDHGLPTYNGAREAYNLTAAADFSDVTSDADLSALLSAAYDGDIDTLDAITGGLAEDT-LSTGGIF 297
AVLSPA+AV ++A+AVSN SP FKLPVD VQR RDHG+P+YN REAY L+ A FSDV++D D+ LL AAY G+I+ LDA G LAE+ S GG F
Sbjct: 317 AVLSPAMAVWPHFASAVSNASPLFKLPVDMVQRARDHGVPSYNDVREAYELSKATAFSDVSADDDVVQLLYAAYGGEIENLDACVGALAEEKEASLGGNF 416
BLAST of mRNA_S-dermatodea_contig12496.1549.1 vs. uniprot
Match: D8LB73_ECTSI (Peroxinectin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB73_ECTSI) HSP 1 Score: 89.0 bits (219), Expect = 1.550e-18 Identity = 47/94 (50.00%), Postives = 60/94 (63.83%), Query Frame = 1
Query: 16 ALAVDTYYATAVSNRSPFFKLPVDGVQRGRDHGLPTYNGAREAYNLTAAADFSDVTSDADLSALLSAAYDGDIDTLDAITGGLAEDTLSTGGIF 297
A +D + VS SP F PV+ +QRGRDHG+P+YN AREAY L+ F+++TSD + A LS AY D+D LDA TG LAE T G+F
Sbjct: 392 ARGIDASFVAEVSVSSPLFNFPVEAIQRGRDHGVPSYNSAREAYALSRFDSFAEITSDTTVQATLSTAYGNDVDLLDAYTGALAE-TEEGSGLF 484
BLAST of mRNA_S-dermatodea_contig12496.1549.1 vs. uniprot
Match: A0A6H5K036_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K036_9PHAE) HSP 1 Score: 78.6 bits (192), Expect = 6.710e-15 Identity = 36/47 (76.60%), Postives = 40/47 (85.11%), Query Frame = 1
Query: 1 AVLSPALAVDTYYATAVSNRSPFFKLPVDGVQRGRDHGLPTYNGARE 141
AVLSP LA D+++ TAVSN SP FKLPVD VQRGRDHGLPTYN AR+
Sbjct: 467 AVLSPVLAADSHFTTAVSNGSPLFKLPVDAVQRGRDHGLPTYNDARQ 513 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12496.1549.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig12496.1549.1 >prot_S-dermatodea_contig12496.1549.1 ID=prot_S-dermatodea_contig12496.1549.1|Name=mRNA_S-dermatodea_contig12496.1549.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=99bp AVLSPALAVDTYYATAVSNRSPFFKLPVDGVQRGRDHGLPTYNGAREAYNback to top mRNA from alignment at S-dermatodea_contig12496:4678..5443- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig12496.1549.1 ID=mRNA_S-dermatodea_contig12496.1549.1|Name=mRNA_S-dermatodea_contig12496.1549.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=766bp|location=Sequence derived from alignment at S-dermatodea_contig12496:4678..5443- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig12496:4678..5443- >mRNA_S-dermatodea_contig12496.1549.1 ID=mRNA_S-dermatodea_contig12496.1549.1|Name=mRNA_S-dermatodea_contig12496.1549.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=594bp|location=Sequence derived from alignment at S-dermatodea_contig12496:4678..5443- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |