mRNA_S-dermatodea_contig12488.1540.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig12488.1540.1
Unique NamemRNA_S-dermatodea_contig12488.1540.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig12488.1540.1 vs. uniprot
Match: A0A6H5JQ44_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ44_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 1.770e-63
Identity = 97/186 (52.15%), Postives = 125/186 (67.20%), Query Frame = 2
Query:    2 RVLSEGVMKDSAMTPEVCNAYCEGEGGYLYYAVEFGGECWCGGAYVDYSRLGALEDTSCNNQCTGDASLMCGGRDAFNIYQYETVNQPEGYLGCYTDSKNDRMFNFAAKDLPDLSVASCKALCDGYPFYGLQYGDECFCGLQSEDYTALGVSNACDMRCTGEATDICGGRNAMSVFAQDVTATTPP 559
            RVL  G+M  S MTP+VC AYC  +G Y +Y V++G ECWCG A  +Y RLGALE + C+  CTGDAS  CGG D+F  ++   ++QPEGYLGC+ DS++ R+F+         +  +CKA C G+ +YGLQY +ECFCGL  EDYT LG S+AC  RC+G+    CGG NAM VFA D   T+PP
Sbjct:   63 RVLQSGLMGQSDMTPDVCAAYCLDKGSYTFYGVQYGQECWCGRAGTEYDRLGALEMSECDYPCTGDASSTCGGFDSFQAFELGALDQPEGYLGCFVDSQSSRLFSAPLVASASNTAETCKATCAGFAYYGLQYSEECFCGLAEEDYTRLGTSDACGYRCSGDVLSTCGGFNAMDVFAMDAGVTSPP 248          
BLAST of mRNA_S-dermatodea_contig12488.1540.1 vs. uniprot
Match: D7FLJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ3_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 5.260e-60
Identity = 96/183 (52.46%), Postives = 125/183 (68.31%), Query Frame = 2
Query:   23 MKDSAMTPEVCNAYCEGEGGYLYYAVEFGGECWCGGAYVDYSRLGALEDTSCNNQCTGDASLMCGGRDAFNIYQYETVNQPEGYLGCYTDSKNDRMFNFAAKDLPDLSVASCKALCDGYPFYGLQYGDECFCGLQSEDYTALGVSNACDMRCTGEATDICGGRNAMSVFAQDVTATTPPAATP 571
            M+ S MTP+VC AYC  EG Y +Y V++G ECWCG +  +Y RLGALE + C+  CTGDASL CGG D+F+ ++   +++PEGYLGC+ DS++ R+F+         +  +CKA C G+ +YGLQY +ECFCGL  EDYT LG S+AC  RCTG+    CGG NAM VFA D   T+PPA  P
Sbjct:    1 MRQSDMTPDVCAAYCLDEGTYTFYGVQYGQECWCGTSGTEYDRLGALEMSECDYPCTGDASLSCGGFDSFHAFELGALDKPEGYLGCFVDSQSSRLFSNPFVASASNTAETCKATCAGFAYYGLQYSEECFCGLADEDYTRLGTSDACGYRCTGDVLSTCGGFNAMDVFAMD-DVTSPPATAP 182          
BLAST of mRNA_S-dermatodea_contig12488.1540.1 vs. uniprot
Match: D7FLI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI8_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 7.610e-49
Identity = 86/182 (47.25%), Postives = 115/182 (63.19%), Query Frame = 2
Query:    2 RVLSEGVMKDSAMTPEVCNAYCEGEGGYLYYAVEFGGECWCGGAYVDYSRLGALEDTSCNNQCTGDASLMCGGRDAFNIYQYETVNQPE-----GYLGCYTDSKNDRMFNFAAKDLPDLSVASCKALCDGYPFYGLQYGDECFCGLQSEDYTALGVSNACDMRCTGEATDICGGRNAMSVFA 532
            RVL + +M  + +TP+ C  +C  EG Y +Y +++G ECWCG A  DY RLG+L+ + C   CTGDAS  CGG  AF  ++  + NQP      GYLGCY D ++ R+F+     L D +  SCKA C GY +YGLQYG++CFCG   EDYT  G S+ C + CTG+A+  CGG  AM V+A
Sbjct:   62 RVLEQELMDQTDLTPDTCALHCYSEG-YQFYGLQYGQECWCGVAGTDYDRLGSLDMSECAYPCTGDASSTCGGYLAFQAFELGSQNQPTTAPPTGYLGCYADDRS-RIFSALHVTLTDNNAESCKASCVGYAYYGLQYGEQCFCGTADEDYTVYGESDNCVLSCTGDASSTCGGSWAMDVYA 241          
BLAST of mRNA_S-dermatodea_contig12488.1540.1 vs. uniprot
Match: D8LDE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE3_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 1.250e-46
Identity = 82/177 (46.33%), Postives = 107/177 (60.45%), Query Frame = 2
Query:    2 RVLSEGVMKDSAMTPEVCNAYCEGEGGYL-YYAVEFGGECWCGGAYVDYSRLGALEDTSCNNQCTGDASLMCGGRDAFNIYQYETVNQPEGYLGCYTDSKNDRMFNFAAKDLPDLSVASCKALCDGYPFYGLQYGDECFCGLQSEDYTALGVSNACDMRCTGEATDICGGRNAMSVF 529
            R L+ G M    MTP +CN YC G+  Y  +YAV++G ECWCG    DY++LGAL+ T C   CTGD  L CGG D+F I+        +G+LGCY D ++DR+F      L +  V +C+A C G P +GLQYG EC+CG + EDYT  G S  CD  C G     CGG +AM++F
Sbjct:  759 RRLAMGPMSSRDMTPTLCNEYCAGQ--YASFYAVQYGRECWCGDDSTDYAKLGALDMTECAYPCTGDGDLTCGGFDSFEIFSLPAETS-QGHLGCYADEQDDRLFRADKIRLDENGVEACRAACSGSPLFGLQYGRECWCGTEDEDYTKHGASTDCDYPCRGNEDYTCGGFDAMNIF 932          
BLAST of mRNA_S-dermatodea_contig12488.1540.1 vs. uniprot
Match: D7FTD7_ECTSI (WSC domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD7_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 7.580e-41
Identity = 72/178 (40.45%), Postives = 100/178 (56.18%), Query Frame = 2
Query:    2 RVLSEGVMKDSAMTPEVCNAYCEGEGGYLYYAVEFGGECWCGGAYVDYSRLGALEDTSCNNQCTGDASLMCGGRDAFNIYQYETVNQP-EGYLGCYTDSKNDRMFNFAAKDLPDLSVASCKALCDGYPFYGLQYGDECFCGLQSEDYTALGVSNACDMRCTGEATDICGGRNAMSVFA 532
            R++ +  + D +MT E+C   C G     Y+A ++G ECWCG A +DY+  G  E T C   C GDA   CGG DA N+Y Y   +     ++GCY D    R+   A  D   +S+  C+A C G  ++GLQYG ECFCG  S D    G S+AC+  C G++  +CGG  AMSV++
Sbjct:  217 RIMDDLALSDYSMTTELCELTCLGS---TYFATQYGRECWCGSADMDYALHG--ESTDCTYACAGDADQTCGGFDAANVYSYTDESTAISAFVGCYQDESGSRIMELALTDSSSMSMEMCEAKCRGNTYFGLQYGRECFCGGSSTDLLEHGESSACNYECPGDSDQVCGGFYAMSVYS 389          
BLAST of mRNA_S-dermatodea_contig12488.1540.1 vs. uniprot
Match: D7FUE8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE8_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 3.230e-40
Identity = 69/166 (41.57%), Postives = 94/166 (56.63%), Query Frame = 2
Query:   38 MTPEVCNAYCEGEGGYLYYAVEFGGECWCGGAYVDYSRLGALEDTSCNNQCTGDASLMCGGRDAFNIYQYETVNQP-EGYLGCYTDSKNDRMFNFAAKDLPDLSVASCKALCDGYPFYGLQYGDECFCGLQSEDYTALGVSNACDMRCTGEATDICGGRNAMSVFA 532
            MT E+C   C G     Y+A ++G ECWCG A +DY+  G  E T C   C G+A   CGG DA N+Y+Y   + P   ++GCY D  + RM   A  D   ++   C+A C G  ++G+QYG ECFCG  S +    G S+ACD  C G++   CGG  AMSV++
Sbjct:    1 MTTELCELTCLGS---TYFATQYGRECWCGSAGMDYALHG--ESTDCTYGCAGNADQTCGGFDAANVYRYTNESTPTSSFVGCYQDESDARMMELALTDSSSMTKEMCEAECTGNRYFGMQYGSECFCGGSSTNLLENGESSACDYECPGDSEQECGGFYAMSVYS 161          
BLAST of mRNA_S-dermatodea_contig12488.1540.1 vs. uniprot
Match: D7FUE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE6_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 2.970e-39
Identity = 72/178 (40.45%), Postives = 102/178 (57.30%), Query Frame = 2
Query:    2 RVLSEGVMKDSAMTPEVCNAYCEGEGGYLYYAVEFGGECWCGGAYVDYSRLGALEDTSCNNQCTGDASLMCGGRDAFNIYQYETVNQP-EGYLGCYTDSKNDRMFNFAAKDLPDLSVASCKALCDGYPFYGLQYGDECFCGLQSEDYTALGVSNACDMRCTGEATDICGGRNAMSVFA 532
            R++ +  + D +MT E+C   C G     Y+A ++G ECWCG A V+Y+  G  E T C   C GDA   CGG DA N+Y+Y   + P   ++GCY D  + R+   A  D   ++   C+A C G  F+G+QYG ECFCG  S D    G S+AC+  C G++  +CGG  AMSV++
Sbjct:  644 RIMDDLALSDYSMTTELCEQTCLGN---TYFATQYGRECWCGSAGVEYALHG--ESTDCTYACAGDADQTCGGFDAANVYRYTDESTPTSSFVGCYQDESDARIMELALTDSSSMTKEMCEAECTGNTFFGMQYGRECFCGGSSTDLLEHGESSACNYECPGDSDQVCGGFYAMSVYS 816          
BLAST of mRNA_S-dermatodea_contig12488.1540.1 vs. uniprot
Match: D8LEL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEL0_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 9.140e-34
Identity = 64/181 (35.36%), Postives = 92/181 (50.83%), Query Frame = 2
Query:   20 VMKDSAMTPEVCNAYCEGEGGYLYYAVEFGGECWCGGAYVDYSRLGALEDTSCNNQCTGDASLMCGGRDAFNIYQYETVNQPEGY-----------LGCYTDSKNDRMFNFAAKDLPDLSVASCKALCDGYPFYGLQYGDECFCGLQSEDYTALGVSNACDMRCTGEATDICGGRNAMSVF 529
            V+ D++MT E+C   C G    +Y+A ++G ECWCG    DY+  G  E T C   C+GDA   CGG DA N+Y+Y   + P              LGCY D +  R+ +        ++   C+  C G  ++  QYG EC+CG    DY   G S  C   C+G+A  +CGG +A +V+
Sbjct:    5 VLSDASMTTELCEQTCVGS---IYFATQYGRECWCGSVGADYTVHG--ESTDCTYACSGDADQTCGGFDAANVYRYTDDSTPSXXXXXTEAAPFVALGCYGDDREARIMDDLVLSDSSMTTELCELTCLGSTYFATQYGRECWCGSDGADYALHGESTECTYPCSGDADQLCGGFDAANVY 180          
BLAST of mRNA_S-dermatodea_contig12488.1540.1 vs. uniprot
Match: A0A6H5KL84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL84_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 1.230e-31
Identity = 68/169 (40.24%), Postives = 88/169 (52.07%), Query Frame = 2
Query:   38 MTPEVCNAYCEGEGGYLYYAVEFGGECWCGGAYVDYSRLGALEDTSCNNQCTGDASLMCGGRDAFNIYQYET-VNQPEGYLGCYTDSKNDRMFNFAAKDLPDLSVAS-CKALCDGYPFYGLQYGDECFCGLQSEDYTALGVSNACDMRCTGEATDICGGRNAMSVFAQD 538
            MT  VC+ +C     Y YY  ++  ECWCG    DY   GA  +  C   C GDAS  CGG  + ++YQ E  +     Y GCY+D   +R+F     D  D   A  C A CD   FYG QY  EC+CG  +  Y+  GV   CDM C+G + + CGG  +M V+AQD
Sbjct:   36 MTKAVCSDHCSA---YPYYGTQYSVECWCGDENADYDANGASNE--CVMPCAGDASETCGGSYSMSVYQNEVEIPVDPAYRGCYSDPGTNRVF--VQDDSSDEMTAEVCAAQCDESAFYGTQYSRECWCGDINAQYSVNGVG-VCDMPCSGNSEESCGGSYSMDVYAQD 196          
BLAST of mRNA_S-dermatodea_contig12488.1540.1 vs. uniprot
Match: D7FRS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS1_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 1.550e-31
Identity = 67/188 (35.64%), Postives = 93/188 (49.47%), Query Frame = 2
Query:    2 RVLSEGVMKDSAMTPEVCNAYCEGEGGYLYYAVEFGGECWCGGAYVDYSRLGALEDTSCNNQCTGDASLMCGGRDAFNIYQYETVNQPEGY------------LGCYTDSKNDRMFNFAAKDLPDLSVASCKALCDGYPFYGLQYGDECFCGLQSEDYTALGVSNACDMRCTGEATDICGGRNAMSVF 529
            R++ +  + D+AMT E+C   C G    +Y+A ++G ECWCG A  DY   G  E   C   C GDA   CGG DA N+Y Y+  + P               LGCY D + DR+ +  A     ++   C+  C G  ++  QYG EC+CG    DY   G S  C   C G+A   CGG +A +V+
Sbjct:  646 RIMDDLALSDNAMTTELCEQTCLGN---IYFATQYGQECWCGSAGADYILHG--ESADCTYACAGDADQTCGGFDAANVYLYKGESTPSPTPSPTADDASPLSLGCYEDDREDRIMDDLALSDNAMTTELCEQTCLGNTYFATQYGRECWCGSAGADYILHGESADCTYACAGDADQTCGGFDAANVY 828          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12488.1540.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQ44_9PHAE1.770e-6352.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLJ3_ECTSI5.260e-6052.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FLI8_ECTSI7.610e-4947.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LDE3_ECTSI1.250e-4646.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTD7_ECTSI7.580e-4140.45WSC domain containing protein n=1 Tax=Ectocarpus s... [more]
D7FUE8_ECTSI3.230e-4041.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FUE6_ECTSI2.970e-3940.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LEL0_ECTSI9.140e-3435.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KL84_9PHAE1.230e-3140.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRS1_ECTSI1.550e-3135.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12488contigS-dermatodea_contig12488:2490..4746 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score212.6
Seed ortholog evalue1.6e-52
Seed eggNOG ortholog2880.D7FLJ3
EggNOG OGs28IRF@1,2QR2R@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCarbohydrate-binding WSC
Ec32 orthologEc-06_001630.3
Exons5
Model size594
Cds size570
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12488.1540.1prot_S-dermatodea_contig12488.1540.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig12488 2490..4724 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924249.553031-CDS-S-dermatodea_contig12488:2489..25421622924249.553031-CDS-S-dermatodea_contig12488:2489..2542Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12488 2490..2542 -
1694079124.3249335-CDS-S-dermatodea_contig12488:2489..25421694079124.3249335-CDS-S-dermatodea_contig12488:2489..2542Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12488 2490..2542 -
1622924249.5633974-CDS-S-dermatodea_contig12488:3065..32521622924249.5633974-CDS-S-dermatodea_contig12488:3065..3252Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12488 3066..3252 -
1694079124.3378081-CDS-S-dermatodea_contig12488:3065..32521694079124.3378081-CDS-S-dermatodea_contig12488:3065..3252Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12488 3066..3252 -
1622924249.5725834-CDS-S-dermatodea_contig12488:3798..40361622924249.5725834-CDS-S-dermatodea_contig12488:3798..4036Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12488 3799..4036 -
1694079124.3456388-CDS-S-dermatodea_contig12488:3798..40361694079124.3456388-CDS-S-dermatodea_contig12488:3798..4036Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12488 3799..4036 -
1622924249.5823839-CDS-S-dermatodea_contig12488:4273..43381622924249.5823839-CDS-S-dermatodea_contig12488:4273..4338Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12488 4274..4338 -
1694079124.3600574-CDS-S-dermatodea_contig12488:4273..43381694079124.3600574-CDS-S-dermatodea_contig12488:4273..4338Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12488 4274..4338 -
1622924249.5969613-CDS-S-dermatodea_contig12488:4697..47241622924249.5969613-CDS-S-dermatodea_contig12488:4697..4724Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12488 4698..4724 -
1694079124.3774202-CDS-S-dermatodea_contig12488:4697..47241694079124.3774202-CDS-S-dermatodea_contig12488:4697..4724Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12488 4698..4724 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924249.606372-UTR-S-dermatodea_contig12488:4724..47461622924249.606372-UTR-S-dermatodea_contig12488:4724..4746Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12488 4725..4746 -
1694079124.388636-UTR-S-dermatodea_contig12488:4724..47461694079124.388636-UTR-S-dermatodea_contig12488:4724..4746Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12488 4725..4746 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig12488.1540.1

>prot_S-dermatodea_contig12488.1540.1 ID=prot_S-dermatodea_contig12488.1540.1|Name=mRNA_S-dermatodea_contig12488.1540.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=190bp
MKDSAMTPEVCNAYCEGEGGYLYYAVEFGGECWCGGAYVDYSRLGALEDT
SCNNQCTGDASLMCGGRDAFNIYQYETVNQPEGYLGCYTDSKNDRMFNFA
AKDLPDLSVASCKALCDGYPFYGLQYGDECFCGLQSEDYTALGVSNACDM
RCTGEATDICGGRNAMSVFAQDVTATTPPAATPSPVTINP
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mRNA from alignment at S-dermatodea_contig12488:2490..4746-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig12488.1540.1 ID=mRNA_S-dermatodea_contig12488.1540.1|Name=mRNA_S-dermatodea_contig12488.1540.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2257bp|location=Sequence derived from alignment at S-dermatodea_contig12488:2490..4746- (Saccorhiza dermatodea SderLu1190fm monoicous)
CCGGGTATTGTCCGAGGGCGTCATGAAGGACTCGGCGATGACCCCAGAGG TGAGAAATGTGCTGTAATGCGGCCAACTTGTTGTTGTTGGTGTGGAAGTC ACATCTCTCGCGGAGCAGTCGTTACAGGTGGTGTCGTGCACATGCGAGCG TAGCGTTTTAGGGTTTTGTGCGGACTGCTGACTGAGAACTGAATGCTCCA CAATTACCTGAGTTCAGACACTCTGAGGAGGATGTCCGCCGATTCATTCA GCTTTGGGCACGCTGCCATACATCATAATGGGCTCGCTCGGTGTGCGTCG ATTCGTGCATAGGAGTCTTCCCTCGCCCCTCCAGCCCCCCTGAGCACTAT CTCGTTTCCGAACAGTTCCCGCCCCCGCCTTCCAATGCCCTGCTCACTCT GCGCTCAGGTTTGCAATGCCTACTGTGAGGGCGAAGGCGGGTACTTGTAC TACGCCGTGGAGTTCGGCGGAGAGTGAGTTGTGGTGTGACGATGACTGAT TCGTGACGGGCAGTGCGTAGGTTGCGCCGTACTTCCGCCCGTGACTTACC ATGGGTGGGGAGCGATAAAATGTATTGCGAGCACCTGGGTGCCGCTTGCG TGCCTCGACCCGAAACGCAAATAGTGTTGCTTGGTCCGTATTGAACACGC CGCCCGCCCCCCGTCAATCTGGACTTTATTTCGTTCCCCCACTTTTCCTT GTCGCCTCAGGTGTTGGTGCGGGGGTGCTTATGTCGACTATTCCAGGTTG GGCGCCCTTGAAGACACCTCATGCAACAACCAGTGCACCGGTGACGCTAG TCTGATGTGTGGCGGACGGGATGCCTTCAATATTTACCAGTACGAAACCG TGAACCAACCCGAGGGTTACCTTGGCTGCTACACGGACTCCAAAAATGAT CGGATGTTCAACTTCGCAGCAAAGGACCTCCCAGACCTATCGGTGGCGGT ACGTGTTTCGCCTGTCTCTATCCGCTCCACCAGTGCTGCTTGGTGCATGT TGCACTCCGCATACACGATCTCCGCCGCACAGGGACCAGCGGTTGCTACC GTAGGCTTGCATCGAGGGCGGGCGCACCCCAGGCGATTAATCGATTGCGG ATGCAGTTCCTGCCGCCTGTGCGATGTAGTAGTGAAGTGGGTACCCACGG CTACGCCCGTGAGCTGGGCGTTGGGGCGGGGCGCGCGAGGTGGTGTGATT GTGGGCGAACGGGCGAACGGGCAAAAGATCCGAAAAAGCTTCAAATGAGT CCTCTGTAAGCCGTATCGATTTGGCATCAAAGGCCATCTCGAAATCGCTA CTGGTATTTAAAACGGCCAAAGCACTTAATTATGAGTAATTTCGTCTGTT GCCCATTTCGAAGGACAAGAAGTGCTGTGAGCAACACATTATTGCAATGG CTGCCTAGTAGCATGTTGCCAACTCTGTGCTCGCTCTCTTCCCTGTTTCG ATTGCCCATTCCTGTGCTTGTATGTTCTCCGCTTTCCCGTCCAGAGCTGT AAGGCCCTTTGCGACGGTTACCCTTTCTACGGACTCCAATACGGGGACGA GTGCTTTTGCGGCCTCCAGAGTGAGGATTACACCGCGCTCGGAGTCTCCA ACGCTTGCGACATGCGATGCACGGGAGAAGCCACTGATATTTGCGGCGGC CGCAATGCCATGAGCGTTTTCGCCCAGGACGGTGAGAAAACGATAAGAAA ACGATAAGATCTGCAATAGGAACGCGTTACAAGCACGTATTTGCGCTACA AGCAAGTTTGCTGTTCTTGAAGGTTGCAATTATTGTTAAGCGCCCGCATC CTACCCTTTGTTTTTTTTTGGGCTAGTTCAAATCTCCGTATAACGTTGTA GACACCGCCTTGAATTTACCCACTCTATACTACTAGGTCCCCTGTATTCC GTATGGTACGAATGCCGTGCATTGTCTTGTCAGTGGCGCCGTCTTCTAAA GACAACATTGAGCACCGAATGCTTCTTGGGGCACATATTGCCGCGTCATG GACGTTTTACCAAGCAGGTTTCACTCATGTACGCTGCTCACCTCGCCCTC TTTCGTGCCTGGGCAATACCCCCCTCTCCATCCTTTCGAGGACCCGTGGT CAACGGTCTAACAGCCAAGGCATGCAAAACATGAGTATCCCCCCGCCCCC CTCCCAATCCCTGGCCCGCCTACCCACCGCATCAATTCCTTCCTCCCGGG GCAGTCACGGCGACGACTCCGCCGGCTGCTACGCCCTCCCCGGTAACCAT CAATCCT
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Coding sequence (CDS) from alignment at S-dermatodea_contig12488:2490..4746-

>mRNA_S-dermatodea_contig12488.1540.1 ID=mRNA_S-dermatodea_contig12488.1540.1|Name=mRNA_S-dermatodea_contig12488.1540.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1140bp|location=Sequence derived from alignment at S-dermatodea_contig12488:2490..4746- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGAAGGACTCGGCGATGACCCCAGAGATGAAGGACTCGGCGATGACCCC
AGAGGTTTGCAATGCCTACTGTGAGGGCGAAGGCGGGTACTTGTACTACG
CCGTGGAGTTCGGCGGAGAGTTTGCAATGCCTACTGTGAGGGCGAAGGCG
GGTACTTGTACTACGCCGTGGAGTTCGGCGGAGAGTGTTGGTGCGGGGGT
GCTTATGTCGACTATTCCAGGTTGGGCGCCCTTGAAGACACCTCATGCAA
CAACCAGTGCACCGGTGACGCTAGTCTGATGTGTGGCGGACGGGATGCCT
TCAATATTTACCAGTACGAAACCGTGAACCAACCCGAGGGTTACCTTGGC
TGCTACACGGACTCCAAAAATGATCGGATGTTCAACTTCGCAGCAAAGGA
CCTCCCAGACCTATCGGTGGCGGTGTTGGTGCGGGGGTGCTTATGTCGAC
TATTCCAGGTTGGGCGCCCTTGAAGACACCTCATGCAACAACCAGTGCAC
CGGTGACGCTAGTCTGATGTGTGGCGGACGGGATGCCTTCAATATTTACC
AGTACGAAACCGTGAACCAACCCGAGGGTTACCTTGGCTGCTACACGGAC
TCCAAAAATGATCGGATGTTCAACTTCGCAGCAAAGGACCTCCCAGACCT
ATCGGTGGCGAGCTGTAAGGCCCTTTGCGACGGTTACCCTTTCTACGGAC
TCCAATACGGGGACGAGTGCTTTTGCGGCCTCCAGAGTGAGGATTACACC
GCGCTCGGAGTCTCCAACGCTTGCGACATGCGATGCACGGGAGAAGCCAC
TGATATTTGCGGCGGCCGCAATGCCATGAGCGTTTTCGCCCAGGACGAGC
TGTAAGGCCCTTTGCGACGGTTACCCTTTCTACGGACTCCAATACGGGGA
CGAGTGCTTTTGCGGCCTCCAGAGTGAGGATTACACCGCGCTCGGAGTCT
CCAACGCTTGCGACATGCGATGCACGGGAGAAGCCACTGATATTTGCGGC
GGCCGCAATGCCATGAGCGTTTTCGCCCAGGACGTCACGGCGACGACTCC
GCCGGCTGCTACGCCCTCCCCGGTAACCATCAATCCTTCACGGCGACGAC
TCCGCCGGCTGCTACGCCCTCCCCGGTAACCATCAATCCT
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