mRNA_S-dermatodea_contig12481.1537.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_S-dermatodea_contig12481.1537.1
Unique Name	mRNA_S-dermatodea_contig12481.1537.1
Type	mRNA
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)

Homology

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BLAST of mRNA_S-dermatodea_contig12481.1537.1 vs. uniprot
Match: D7FRJ9_ECTSI (Trypsin domain protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRJ9_ECTSI)

HSP 1 Score: 233 bits (594), Expect = 9.390e-69
Identity = 120/183 (65.57%), Postives = 137/183 (74.86%), Query Frame = 1

Query:    1 VAKVVPTPVVYPSTNMVYLTASPRLRINGTNFNEKSTSLFFSPPLDDGADVEIAVASPNTIWVSLVQKVSGAKWADEPGPLKLVGIDTGPGVLVLRQDLGGITIAEMQAGMKGHSISVQTHEEINMYQSTKALTVAGEGLRPDESGGTTFRFGTSLNPGANFTVNVSDSSAVFTLAEGSKWRQ 549
            VA V+PTP VYPS  ++YLT SP + INGTNF+ K+T+LFFSP L DG DV I V S   IWVSLVQKV G  WADEPGPLKLV IDTG G L+LR+DLGG+TIAEMQA MKGHS+SV+THEE+ MYQS+K LT+AG+G     S  T FRF  SL  G NFT  V+  SA F L EGSKWRQ
Sbjct:   55 VASVIPTPTVYPSDRILYLTVSPHVMINGTNFDTKTTALFFSPSLSDGTDVTILVKSSTMIWVSLVQKVEGTHWADEPGPLKLVAIDTGAGRLLLREDLGGVTIAEMQADMKGHSLSVETHEEVTMYQSSKVLTIAGQGFN---SSYTRFRFANSLVEGKNFTQVVTPESATFALEEGSKWRQ 234

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BLAST of mRNA_S-dermatodea_contig12481.1537.1 vs. uniprot
Match: D7FRK3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRK3_ECTSI)

HSP 1 Score: 220 bits (561), Expect = 1.440e-67
Identity = 116/183 (63.39%), Postives = 135/183 (73.77%), Query Frame = 1

Query:    1 VAKVVPTPVVYPSTNMVYLTASPRLRINGTNFNEKSTSLFFSPPLDDGADVEIAVASPNTIWVSLVQKVSGAKWADEPGPLKLVGIDTGPGVLVLRQDLGGITIAEMQAGMKGHSISVQTHEEINMYQSTKALTVAGEGLRPDESGGTTFRFGTSLNPGANFTVNVSDSSAVFTLAEGSKWRQ 549
            VA V+PTP VYPS  M+YLT SP + INGTNFN K+T+LFFSP L  G DV I V S  TI VSLV+K  G +WADEPG LKLV IDTG G L+LR+DLGG+TIAEMQA +  HS+SV+THEE+ MYQS+K LT+AG+G     +G T FRFG  L  G NFT  V+  SA FTL EGSKWRQ
Sbjct:   55 VASVIPTPTVYPSDRMLYLTVSPLVMINGTNFNTKTTALFFSPRLFGGRDVIIFVESSTTIVVSLVKKAEGTQWADEPGALKLVAIDTGAGRLLLREDLGGVTIAEMQADLNRHSLSVETHEEVTMYQSSKVLTIAGQGFN---TGNTRFRFGNGLLEGKNFTQIVTPESATFTLEEGSKWRQ 234

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BLAST of mRNA_S-dermatodea_contig12481.1537.1 vs. uniprot
Match: A0A6H5LDJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDJ8_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 1.160e-66
Identity = 117/210 (55.71%), Postives = 137/210 (65.24%), Query Frame = 1

Query:    1 VAKVVPTPVVYPSTNMVYLTASPRLRINGTNFNEKSTSLFFSPPLDDGADVEIAVASPNTIWVSLVQKVSGAKWADEPGPLKLVGIDTGPGVLVLRQD---------------------------LGGITIAEMQAGMKGHSISVQTHEEINMYQSTKALTVAGEGLRPDESGGTTFRFGTSLNPGANFTVNVSDSSAVFTLAEGSKWRQ 549
            VA V+PTP VYPS  M+YLT SP +RINGTNF+ K+T+LFFSPPL DG DV+I V S  TI V LV K  G +WADEPGPLKLV IDTG G+L+LR+D                           LGG+TIAEMQA M GHSISV+ HEE+ MYQS+K LT+AG+G        T FRF  S+  G N+T  V+  SA FTL EGSKWRQ
Sbjct:    6 VASVIPTPTVYPSDRMLYLTVSPYVRINGTNFDTKTTALFFSPPLSDGTDVDIFVKSSTTIVVYLVPKTEGNQWADEPGPLKLVAIDTGAGLLLLREDVSDFPLLARSIAAVKNXRSLVLPVYVQLGGVTIAEMQADMDGHSISVEPHEEVTMYQSSKVLTIAGQGFNASY---TKFRFAASIVEGRNYTQVVTPESATFTLEEGSKWRQ 212

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BLAST of mRNA_S-dermatodea_contig12481.1537.1 vs. uniprot
Match: A0A835YLV2_9STRA (Peptidase S1 and S6, chymotrypsin/Hap n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLV2_9STRA)

HSP 1 Score: 148 bits (374), Expect = 4.580e-38
Identity = 92/185 (49.73%), Postives = 109/185 (58.92%), Query Frame = 1

Query:    1 VAKVVPTPVVYPSTNMVYLTASPRLRINGTNFNEKSTSLFFSPPLDDGADVEIAVASPNTIWVSLVQKVSGAKWADE-PGPLKLVGIDTGPGVLVLRQDLGGITIAEMQAGMKGHSISVQTHEEINMYQSTKALTVAGEGLRPDESGGTTFRFGTSLNPG-ANFTVN-VSDSSAVFTLAEGSKWR 546
            VA V PTP V  S  +VY T  P L +NGTNFN K T+LFF PPL DG D+   V SP  I   L+ K  G  W  E PGPLKLV IDTG G L L  D  G  IAE+QA  +GH ++V+TH E ++YQST  L + G G  PD   GT  RF   L  G AN+T + V+ +     LA GSKWR
Sbjct:  112 VATVYPTPDVEASDALVYTTTPPNLIVNGTNFNIKHTALFFDPPLQDGVDISTQVVSPTQI---LLVKRYGKMWRSEGPGPLKLVAIDTGGGRLPLDPDTKGRIIAEVQADREGHGVTVETHVEKHIYQSTPTLEIDGVGFNPD---GTQLRFANGLRGGGANYTASTVTPTRMTLDLAPGSKWR 290

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BLAST of mRNA_S-dermatodea_contig12481.1537.1 vs. uniprot
Match: D8LG95_ECTSI (Peptidase S1 and S6, chymotrypsin/Hap n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG95_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 2.950e-37
Identity = 82/186 (44.09%), Postives = 114/186 (61.29%), Query Frame = 1

Query:    1 VAKVVPTPVVYPSTNMVYLTASPRLRINGTNFNEKSTSLFFSPPLDDGADVEIAVASPNTIWVSLVQKVSGAK-WADEPGPLKLVGIDTGPGVLVLRQDLGGITIAEMQAGMKGHSISVQTHEEINMYQSTKALTVAGEGLRPDESGGTTFRFGTSLNPGA-NFTVNVSDSSAV-FTLAEGSKWRQ 549
            +A +VP+P V  S+  +Y+  +P+L +NGTNFN K T L+F PPL +G  ++  V SP  I ++   K      WADEPGPLK+V I+TG G L L  D GGI IAE+QA +  H ++VQ HE +++YQS+K+  ++G G       GT  RF  +L  G  NFT+  S    +   LAEGSKWR+
Sbjct:  105 IATIVPSPTVEASSKPIYMQTTPKLIVNGTNFNTKITELYFDPPLQEGVVIQKKVLSPTQISITKNFKYDNPYVWADEPGPLKIVAINTGGGRLSLNSDDGGIVIAEVQADLDHHGVTVQGHESLDLYQSSKSFQISGSGFVD----GTKVRFANALRGGGTNFTITDSQPELLTLELAEGSKWRK 286

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BLAST of mRNA_S-dermatodea_contig12481.1537.1 vs. uniprot
Match: A0A7S2SQB8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQB8_9STRA)

HSP 1 Score: 132 bits (332), Expect = 2.020e-32
Identity = 76/185 (41.08%), Postives = 112/185 (60.54%), Query Frame = 1

Query:    1 VAKVVPTPVVYPSTN-MVYLTASPRLRINGTNFNEKSTSLFFSPPLDDGADVEIAVASPNTIWVSLVQKVSGAKWADEPGPLKLVGIDTGPGVLVLRQDLGGITIAEMQAGMKGHSISVQTHEEINMYQSTKALTVAGEGLRPDESGGTTFRFGTSLN-PGANFTVNVSDSSAVFTLAEG-SKWR 546
            VA V+PTPVV  S + ++Y+  SP+L ING+NF  K   L F PPL++  D  ++V SP+T+   ++ + +GAKW ++PGPLKL  IDTG G L +  D GG+T+AE+QA +  H ++VQ+  E  +YQS+  LT+ G+G     +     RF   L   G N+T     S+ +    +G SKWR
Sbjct:  117 VATVIPTPVVKKSEDTLLYMGVSPKLVINGSNFRNKGLRLMFDPPLEENRDYIVSVKSPSTM---VITRATGAKWREDPGPLKLRRIDTGGGYLRIDPDFGGVTVAEVQADLGAHGVTVQSSPEQKIYQSSSELTIRGDGFNSTSN---VLRFNNGLRGKGINYTAIEHTSTLMKLNLDGKSKWR 295

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BLAST of mRNA_S-dermatodea_contig12481.1537.1 vs. uniprot
Match: A0A836CM60_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM60_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.860e-31
Identity = 80/170 (47.06%), Postives = 101/170 (59.41%), Query Frame = 1

Query:   46 MVYLTASPRLRINGTNFNEKSTSLFFSPPLDDGADVEIAVASPNTIWVSLVQKVSGAKW-ADEPGPLKLVGIDTGPGVLVLRQDLGGITIAEMQAGMKGHSISVQTHEEINMYQSTKALTVAGEGLRPDESGGTTFRFGTSLNPG-ANFTVN-VSDSSAVFTLAEGSKWR 546
            +VY T  P L INGT FN K T+LFF PPL DG DV   V SP  I   L+ K    KW AD PGPL LV IDTG G L L  D GG  IA++QA ++GH ++V++H    +YQST  L + G G  P    GT+ RF  +L  G AN+T + ++ +     LA GS+WR
Sbjct:  118 IVYTTTPPSLVINGTAFNTKYTALFFDPPLGDGIDVSTLVLSPTQI---LLSKKFHHKWRADGPGPLSLVAIDTGGGRLALDMDRGGRVIAQVQADLEGHGVTVESH----IYQSTPTLELDGAGFNPK---GTSLRFANALRGGGANYTASAITPTHMTLELAPGSRWR 277

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BLAST of mRNA_S-dermatodea_contig12481.1537.1 vs. uniprot
Match: A0A7S2C5N5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C5N5_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.820e-29
Identity = 70/184 (38.04%), Postives = 106/184 (57.61%), Query Frame = 1

Query:    1 VAKVVPTPVVYPSTNMVYLTASPRLRINGTNFNEKSTSLFFSPPLDDGADVEIAVASPNTIWVSLVQKVSGAKWADEPGPLKLVGIDTGPGVLVLRQDLGGITIAEMQAGMKGHSISVQTHEEINMYQSTKALTVAGEGLRPDESGGTTFRFGTSLN-PGANFT-VNVSDSSAVFTLAEGSKWR 546
            VA ++PTP +  +  ++Y++ + +L INGTNF  K+  L F PPL+   D  ++V S  ++   ++ +++ + W DEPGPLKL  I+TG G L +    GGITIAE+QA +  H ++V+T      YQ+T +L + G G     +   T RF   L   G N+T V  +D+    TLA  SKWR
Sbjct:  118 VATIIPTPTIKRNEEVIYMSGTSKLMINGTNFRAKNMELMFEPPLEKDKDYIMSVKSATSL---VLTRMTSSVWRDEPGPLKLRRINTGAGALRIDPTYGGITIAEVQANLGAHGVTVETTANERFYQNTGSLVILGNGFNTSHN---TLRFANGLRGKGVNYTTVEHTDTQLRLTLASKSKWR 295

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BLAST of mRNA_S-dermatodea_contig12481.1537.1 vs. uniprot
Match: A0A6H5JWG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWG4_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 3.380e-29
Identity = 74/166 (44.58%), Postives = 99/166 (59.64%), Query Frame = 1

Query:   64 SPRLRINGTNFNEKSTSLFFSPPLDDGADVEIAVASPNTIWVSLVQKVS---GAKWADEPGPLKLVGIDTGPGVLVLRQDLGGITIAEMQAGMKGHSISVQTHEEINMYQSTKALTVAGEGLRPDESGGTTFRFGTSLNPGA-NFTVNVSDSSAV-FTLAEGSKWR 546
            +P+L +NGTNFN K T L+F PPL +G  ++  V SP  I  ++ +K S      WADEPGPLK+V I+TG G L L    GG+ IAE+QA +  H ++VQ HE +++YQSTK   ++G G       GT  RF  +L  G  NFT+  S    +   L EGSKWR
Sbjct:    4 TPKLIVNGTNFNTKITELYFDPPLQEGVVIQ-KVLSPTQI--AITKKFSYDDPPVWADEPGPLKIVAINTGGGRLSLNPADGGVIIAEVQADLDHHGVTVQGHESLDIYQSTKTFHISGSGFVD----GTKVRFANALRGGGTNFTITDSQPELLTLELTEGSKWR 162

[Close]

BLAST of mRNA_S-dermatodea_contig12481.1537.1 vs. uniprot
Match: A0A7S2BT53_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BT53_9STRA)

HSP 1 Score: 115 bits (287), Expect = 2.220e-26
Identity = 69/185 (37.30%), Postives = 104/185 (56.22%), Query Frame = 1

Query:    1 VAKVVPTPVVYPSTN-MVYLTASPRLRINGTNFNEKSTSLFFSPPLDDGADVEIAVASPNTIWVSLVQKVSGAKWADEPGPLKLVGIDTGPGVLVLRQDLGGITIAEMQAGMKGHSISVQTHEEINMYQSTKALTVAGEGLRPDESGGTTFRFGTSLN-PGANFT-VNVSDSSAVFTLAEGSKWR 546
            VAK++PTP +  + + ++Y   + +L INGTNF  K   L F PPL    D  ++V S  ++   ++ + +G KW DEPGPLKL  I+TG G L +    GGI +AE+QA +  H ++V++  +   YQS  +L + GEG    ++   T RF   L   G N+T V  S +     LA+ S+WR
Sbjct:  117 VAKIIPTPTIKRAADTVIYTQGTSKLVINGTNFRPKEMELMFDPPLIKDKDYILSVKSSTSM---VLTRTTGTKWRDEPGPLKLRRINTGAGALRIDPSFGGIVVAEVQADLGAHGVTVESTPDEKFYQSQGSLIIIGEGFNETKN---TLRFANGLRGKGVNYTTVEHSKTQIKLDLAKKSRWR 295

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig12481.1537.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig12481.1537.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19


Match Name	E-value	Identity	Description
D7FRJ9_ECTSI	9.390e-69	65.57	Trypsin domain protein n=2 Tax=Ectocarpus siliculo...	[more]
D7FRK3_ECTSI	1.440e-67	63.39	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5LDJ8_9PHAE	1.160e-66	55.71	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835YLV2_9STRA	4.580e-38	49.73	Peptidase S1 and S6, chymotrypsin/Hap n=1 Tax=Trib...	[more]
D8LG95_ECTSI	2.950e-37	44.09	Peptidase S1 and S6, chymotrypsin/Hap n=1 Tax=Ecto...	[more]
A0A7S2SQB8_9STRA	2.020e-32	41.08	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A836CM60_9STRA	1.860e-31	47.06	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S2C5N5_9STRA	1.820e-29	38.04	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A6H5JWG4_9PHAE	3.380e-29	44.58	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S2BT53_9STRA	2.220e-26	37.30	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig12481	contig	S-dermatodea_contig12481:917..5224 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	149.8
Seed ortholog evalue	1.2e-33
Seed eggNOG ortholog	2880.D8LG95
EggNOG OGs	2D060@1,2SCYI@2759
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Hectar predicted targeting category	other localisation
Exons	4
Model size	550
Cds size	549
Stop	0
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig12481.1537.1	prot_S-dermatodea_contig12481.1537.1	Saccorhiza dermatodea SderLu1190fm monoicous	polypeptide	S-dermatodea_contig12481 917..5224 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622924249.3119476-CDS-S-dermatodea_contig12481:916..1038	1622924249.3119476-CDS-S-dermatodea_contig12481:916..1038	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig12481 917..1038 -
1694079124.1410434-CDS-S-dermatodea_contig12481:916..1038	1694079124.1410434-CDS-S-dermatodea_contig12481:916..1038	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig12481 917..1038 -
1622924249.3229957-CDS-S-dermatodea_contig12481:2988..3121	1622924249.3229957-CDS-S-dermatodea_contig12481:2988..3121	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig12481 2989..3121 -
1694079124.1515903-CDS-S-dermatodea_contig12481:2988..3121	1694079124.1515903-CDS-S-dermatodea_contig12481:2988..3121	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig12481 2989..3121 -
1622924249.335472-CDS-S-dermatodea_contig12481:3428..3560	1622924249.335472-CDS-S-dermatodea_contig12481:3428..3560	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig12481 3429..3560 -
1694079124.1611032-CDS-S-dermatodea_contig12481:3428..3560	1694079124.1611032-CDS-S-dermatodea_contig12481:3428..3560	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig12481 3429..3560 -
1622924249.345962-CDS-S-dermatodea_contig12481:5062..5224	1622924249.345962-CDS-S-dermatodea_contig12481:5062..5224	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig12481 5063..5224 -
1694079124.1733491-CDS-S-dermatodea_contig12481:5062..5224	1694079124.1733491-CDS-S-dermatodea_contig12481:5062..5224	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig12481 5063..5224 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at S-dermatodea_contig12481:917..5224-
coding sequence from alignment at S-dermatodea_contig12481:917..5224-

protein sequence of mRNA_S-dermatodea_contig12481.1537.1

>prot_S-dermatodea_contig12481.1537.1 ID=prot_S-dermatodea_contig12481.1537.1|Name=mRNA_S-dermatodea_contig12481.1537.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=183bp
VAKVVPTPVVYPSTNMVYLTASPRLRINGTNFNEKSTSLFFSPPLDDGAD
VEIAVASPNTIWVSLVQKVSGAKWADEPGPLKLVGIDTGPGVLVLRQDLG
GITIAEMQAGMKGHSISVQTHEEINMYQSTKALTVAGEGLRPDESGGTTF
RFGTSLNPGANFTVNVSDSSAVFTLAEGSKWRQ

mRNA from alignment at S-dermatodea_contig12481:917..5224-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_S-dermatodea_contig12481.1537.1 ID=mRNA_S-dermatodea_contig12481.1537.1|Name=mRNA_S-dermatodea_contig12481.1537.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4308bp|location=Sequence derived from alignment at S-dermatodea_contig12481:917..5224- (Saccorhiza dermatodea SderLu1190fm monoicous)
GTGGCCAAGGTCGTTCCTACCCCGGTCGTTTACCCTTCGACGAATATGGT
CTACCTCACGGCATCACCTCGACTAAGGATAAACGGAACGAACTTCAATG
AGAAGTCCACTAGCCTCTTCTTCAGCCCCCCGTTGGATGATGGCGCCGAT
GTCGAAATTGCGGTGGGTCACTGTACCTTGTTTTTTGTTTATGTAACGGA
GGTAAACAGTTGAAGGTAATCATGACATCATGACCAGATTCGTGCAGAAT
TGGGTATTCACGTCAAGTTTTGGTTCACTTAAACGATGGCTCGAATACCT
TGTGATGATTTTGTTTGTTTGTTTTTTATTTGACTTTTTTGGCCGCACGA
TCGCAGATGTTGCAAAAGGGCAGACCGTATTGATTTATGGTTTATCATGT
TGGGCACTTTGGAATAATACTCTAATAATATATAATATATAACATTGTAT
TTTTCCAAAGGTTGGGCATACTGTATACTGCTTGGCGCATTTTGGTCCTG
ATTACTTATTCTCTTTGTACCTCTCTAATAGGGGTATCTTTTTTGTTCTC
TCGTGCTTTTCGTTTTTTTGTGTTTTTGGCTTCAGTTGTTGCCTCTTTTG
TTTACCCTTATTTATGTTGTGTTTTTTTTTTATATTTTATAATTAGTTTT
GTGTTTTTTTTGTGTGTGTGTGTGTGTTTTTGTTTTTTTGCATGTGGTTG
AAGATTCCTGCGTTCGGCCGTGATGTTGGACTGTGTGGTCCTCGTTGCTT
TCGATGGCGCCCCTGTTACCTATCCTACCTATCAAATGAAAATGCATATT
TTACGAATACTTGTATGTACAAGTAGATTCGCGTCGATCCCCTCGATCTT
GGTGGATGTATGCATACGATGTGCACAGTGATTTGTCGATTGGCGGGCTG
GTTTCGGAATTTTACAGCAGTTGGTCTATTCTCGGCACCGACACAAGTGT
AGCCGATTGGCCCAAGACTTTGGTTGGTGGGCAGATGAGCAAAAACAAAT
GGGGGGAATCTCGATCTACCAGAGAAACGAATAGAGTAAAACGACAGCCT
TAACTAACGGCAAGGAAATTAGTATTACGGAGGTACACTATAATCAAGTA
GTCAAGTAATCAGGACCAAATGTCATGACCTTTAATACCCAACTATTCAT
ATTGCGACCATGAGAACCCAAACAACAAATATCTCATGAAACACAAAAAA
ACACGAGATGTGACCGTGCACAAGAACGTGGACATCGAAATCTCGATGAT
TCCAGCCTATTTTGATGTTTCTAGGTTGAGACTTGTGTTTAGGAAATTTG
GACCTGTTAAAGTTAACTATAGTATACTCCCCCGTAATATTACGTTTTGC
AGCAATATACCCACCCACTGGTCATATTTATAGAGAGAAAAGGGGGCGGG
GAGGGGGGGGGGGGTACATGCAGGTTCATTACTGGTCAACCTTTTGAAAT
GGAATAACGTGTCCACGTTTTTTAGTTCATGCTGGCCAATCTGAATTTCC
TCGCTCAACAATAAAATCTCGGCAAATCAGAAACCTGCGCGTACATTATC
GCGCGTCTGTCTCCGTTAACGTTAATCACCAATCCGATGCCATTCGTACA
AGGCAAATCCCGTTATAGCATTCGGTACGGTCATTTCTCGTACCCGACAC
GTTCCCAACCACAGGTAGCGTCGCCGAACACGATCTGGGTGTCTCTGGTC
CAGAAAGTATCCGGCGCCAAGTGGGCGGACGAGCCTGGTCCGCTGAAGTT
GGTGGGCATAGACACCGGGCCCGGGGTGCTGGTGCTCCGACAAGACGTGA
GTGTGTTTCGATTGCCTGAGCTTGAGTACGGCGGTTGATTTGCGTGTCGC
TTGTTTCGCGTAAATCGGCCGCGATCAGGTATGGCGTTGTTGCCGATGAA
GATGGCGATCATGTAACTGGTGATGATGATGGCGGCGATAATGATGATGC
TGATGGTGGAGGAACCCTATTGAACGAAAGCTTCAAGATCCCCTATTCAT
GTGAAAGAAGAAGGCTTCATTGCAGTATTAATTGATGAAAATATGTACTG
CTGTGTACACATGTGTGTGTTTTGACTCGGTTCGTGTCTGTCCCCCCTCG
CAGCTGGGAGGCATCACGATCGCTGAGATGCAGGCCGGCATGAAGGGCCA
CAGCATCTCGGTGCAGACACACGAGGAAATCAACATGTACCAGTCCACGA
AGGCCTTGACTGTCGCTGGCGAGGGGTTGAGACCAGGTGAAATATTTATT
GGTTCTACGAGATTCATGAGGCGAACGCTGTATTATTGATTTTTTTTTTT
ATATTACTAGTTTGTGTGGGGGGGGGGGTGGGGGGGGGGGGGGTCGGTGT
TCTTGTGTTAAACGCATCTCGTATCCATACGGGCATAGACCACGCGTCCC
AACAATGCCGGGACGGAGCGATATGGGGGGGTAATACGATAAGTCGCCGT
ACCCAATCGGCAGGCATCTTGAATGAGGTACTTGTATACAGTACAGCTAT
AGTGCAGTGGGGCCGTAGAGCATAATGCTTAACGTAGACCTGCACTGACT
TAGTTTGTTGGTTAGGTAGTTAGCTTTGGCGATATTAATGTTTTCCTCTA
CAACAAGATTGGGCCCCAACGTTCGCTATCTCTGTGTTTTACAAATATTT
TAGAGCTCTCTTGTTTCAGGGGACGAGCATAAGGGTTCACTCAAAACGAC
AACGAAACATTTTATGGGTAGTTTTTGTATTAGTATAGTGTTAGCACAGT
ATTAGTATTAGTATTAGTATTAGTATTGATATTGGTATGATTACTAGTAT
TAGTATTAGTATTAGTATTAGGATTTAACATAATAATAACATCCGACCGC
GACCGAATGGTGGCTACTTGTTGCCTCGCCATAGCCATAGCCCCGGTGGA
AACGTGATGATGATGATAATGATAAATCTACAGTCACGTTTAGAGCTTGC
AATACATCATATCACACGGTGGTTGCACTAGTGCGTGCACCCGTCACCGT
GGTATACTATTTATACCTTACGATTAATACTACATTATTTATACGGTAGT
AACGATATCCTGCTGAAAAACGTACTCGGTTCAAAAGGGGTTAGAGTAGC
CCCGCTGTTCGTGGAACAAAATTATTACAGAGGTACACAGTAGTAATACT
AGTATTAGTATTATAGTAGTAATGGTAATGCTGTACTGTAGTAGTATTAA
TATAATACTAGCAATCAGTACCACAGTAGCAGCTAAGTGTTACAGTATGA
ATATGACCAAAATGTGACAAACAGTATTACAGCATAAATTTATGTGGTCT
GTGTTGTAATAGTATAATAGTATTAATGTAGTCGTATTACCCGCAGTAAT
GATTTTGCTCAAAATTGTACTCAGTCCCAAAATGGTTGTGGAACTATCAA
TATTTACATTAATGTTAATATTAGTAATAGTAACATTAATGTTAATATAA
TATCTTCGATTTTCGGGTTCGCCCGCCTGAAACGCGGCTTTCCCCTCGTC
GTAAATACAATATTATTATTAATATTAATACTTGTAGTGGCAATGGGAAC
AGCGCGATAACCCTACCGCGATACAAGTACAAGTACTGTAGCTATTACGG
AGTTGGTATTAATATACAGTAATCAGGACCAAATTCTCCTCAATACCAGC
GCATTCATGTTTATTAATACTAACGTTAGTATTAATAGTATTCGATCGCT
GGCCCGAACACCTCGTAAACAAAACATGTTGTTTGATTAGATTGATTAGA
CATTTCGGAGTGATGAGGACCAAATGCGCCAACCAGTATGCCCAACGTAA
CGAACCATAAAAATGAAGATGGCTTTCCTTCCTTACTTGTACAATCTCTG
TCATATTCCGGGCTGAAATGTGTCAAACTATAAACCAAAACAAAGGTTAC
AACGTGTTCGGGACAACGGTTAAGAGCACACAAATTCGCCCACCCACCCA
CCCACCCACCCTCCCCCAGTACGTCCAATCGGCCCATGACATACCGAATT
GGGGTCGCAAACGGGAGGATGCAAGAGCACCAGCTGCTATAATCCTTGTG
AAACACAGCCTGTCCAGCGGAAACCCGGTATATCGCTTTGTCCCGGCATT
GTTGAGATGCGTGTGTCCATGTCCGTTTGGATACGACGTTCGTTTAACAT
AAGTGCCCCCTCCCCCCTGTGATGACTATGCTGCAGACGAGTCCGGCGGT
ACTACTTTCCGATTCGGCACCTCTTTGAACCCAGGGGCCAACTTCACGGT
TAACGTTTCTGACAGTTCGGCGGTGTTCACTCTGGCTGAGGGTAGCAAGT
GGAGACAG

Coding sequence (CDS) from alignment at S-dermatodea_contig12481:917..5224-

>mRNA_S-dermatodea_contig12481.1537.1 ID=mRNA_S-dermatodea_contig12481.1537.1|Name=mRNA_S-dermatodea_contig12481.1537.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1098bp|location=Sequence derived from alignment at S-dermatodea_contig12481:917..5224- (Saccorhiza dermatodea SderLu1190fm monoicous)
GTGGCCAAGGTCGTTCCTACCCCGGTCGTTTACCCTTCGACGAATATGGT
CTACCTCACGGCATCACCTCGACTAAGGATAAACGGAACGAACTTCAATG
AGAAGTCCACTAGCCTCTTCTTCAGCCCCCCGTTGGATGATGGCGCCGAT
GTCGAAATTGCGGTGGCCAAGGTCGTTCCTACCCCGGTCGTTTACCCTTC
GACGAATATGGTCTACCTCACGGCATCACCTCGACTAAGGATAAACGGAA
CGAACTTCAATGAGAAGTCCACTAGCCTCTTCTTCAGCCCCCCGTTGGAT
GATGGCGCCGATGTCGAAATTGCGGTAGCGTCGCCGAACACGATCTGGGT
GTCTCTGGTCCAGAAAGTATCCGGCGCCAAGTGGGCGGACGAGCCTGGTC
CGCTGAAGTTGGTGGGCATAGACACCGGGCCCGGGGTGCTGGTGCTCCGA
CAAGACGTAGCGTCGCCGAACACGATCTGGGTGTCTCTGGTCCAGAAAGT
ATCCGGCGCCAAGTGGGCGGACGAGCCTGGTCCGCTGAAGTTGGTGGGCA
TAGACACCGGGCCCGGGGTGCTGGTGCTCCGACAAGACCTGGGAGGCATC
ACGATCGCTGAGATGCAGGCCGGCATGAAGGGCCACAGCATCTCGGTGCA
GACACACGAGGAAATCAACATGTACCAGTCCACGAAGGCCTTGACTGTCG
CTGGCGAGGGGTTGAGACCAGCTGGGAGGCATCACGATCGCTGAGATGCA
GGCCGGCATGAAGGGCCACAGCATCTCGGTGCAGACACACGAGGAAATCA
ACATGTACCAGTCCACGAAGGCCTTGACTGTCGCTGGCGAGGGGTTGAGA
CCAGACGAGTCCGGCGGTACTACTTTCCGATTCGGCACCTCTTTGAACCC
AGGGGCCAACTTCACGGTTAACGTTTCTGACAGTTCGGCGGTGTTCACTC
TGGCTGAGGGTAGCAAGTGGAGACAGACGAGTCCGGCGGTACTACTTTCC
GATTCGGCACCTCTTTGAACCCAGGGGCCAACTTCACGGTTAACGTTTCT
GACAGTTCGGCGGTGTTCACTCTGGCTGAGGGTAGCAAGTGGAGACAG