mRNA_S-dermatodea_contig12472.1533.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig12472.1533.1 vs. uniprot
Match: D8LBI4_ECTSI (Purple acid phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBI4_ECTSI) HSP 1 Score: 234 bits (597), Expect = 1.570e-71 Identity = 105/130 (80.77%), Postives = 119/130 (91.54%), Query Frame = 1
Query: 16 RQDLESTDRTLTPWVVVMMHCPWYNSNLAHQGERQAETAMRAIEPIFYEHKVAVVIAGHVHAYERSHPVVDFGITEDGPVYLVVGGAGNREGHAGSEFYPTPEWSAFRDGKVYGSGRLSVQGSSLALWEW 405
++DLES DR LTPW+VVMMHCPWYNSNLAHQGERQAETAMRA+EP+ ++HK AVVI GHVHAYERSHPVVDF + EDGP++LVVGGAGNREGHA ++FYP PEWSAFRDG VYGSGRLS++ SSLALWEW
Sbjct: 411 QKDLESADRALTPWLVVMMHCPWYNSNLAHQGERQAETAMRAMEPLLHQHKAAVVITGHVHAYERSHPVVDFELAEDGPIHLVVGGAGNREGHA-ADFYPKPEWSAFRDGTVYGSGRLSIRSSSLALWEW 539
BLAST of mRNA_S-dermatodea_contig12472.1533.1 vs. uniprot
Match: A0A6H5KE14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE14_9PHAE) HSP 1 Score: 171 bits (432), Expect = 4.610e-50 Identity = 75/129 (58.14%), Postives = 99/129 (76.74%), Query Frame = 1
Query: 19 QDLESTDRTLTPWVVVMMHCPWYNSNLAHQGERQAETAMRAIEPIFYEHKVAVVIAGHVHAYERSHPVVDFGITEDGPVYLVVGGAGNREGHAGSEFYPTPEWSAFRDGKVYGSGRLSVQGSSLALWEW 405
+DL+ DR+ TPW+V M HCPW+NSNLAH GER A TAMRA+EP+ +++K ++V+AGHVHAYERS PV+ + +DG V LVVGG+GN EG ++Y P+WSAFR+G +G G LSV S++ALWEW
Sbjct: 164 EDLDGCDRSRTPWLVAMFHCPWHNSNLAHPGERMAATAMRAMEPVLFQNKASLVVAGHVHAYERSVPVLSGQLNDDGLVNLVVGGSGNNEGRD-PDYYRLPDWSAFRNGSAFGFGTLSVMNSTMALWEW 291
BLAST of mRNA_S-dermatodea_contig12472.1533.1 vs. uniprot
Match: D7FWJ2_ECTSI (Purple acid phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWJ2_ECTSI) HSP 1 Score: 167 bits (423), Expect = 1.460e-46 Identity = 74/129 (57.36%), Postives = 96/129 (74.42%), Query Frame = 1
Query: 19 QDLESTDRTLTPWVVVMMHCPWYNSNLAHQGERQAETAMRAIEPIFYEHKVAVVIAGHVHAYERSHPVVDFGITEDGPVYLVVGGAGNREGHAGSEFYPTPEWSAFRDGKVYGSGRLSVQGSSLALWEW 405
+DL+ DR+ TPW+V M HCPW+NSNLAH GER A TAM A+EP+ ++HK ++ IAGHVHAYERS PV+ + + G V LVVGG+GN EG ++Y P+WSAFR+G +G G LSV S++ALWEW
Sbjct: 411 EDLDGCDRSRTPWLVAMFHCPWHNSNLAHPGERMAATAMHAMEPVLFQHKASLAIAGHVHAYERSLPVLSGQLNDAGLVNLVVGGSGNNEGRD-PDYYRLPDWSAFRNGSAFGFGTLSVMNSTMALWEW 538
BLAST of mRNA_S-dermatodea_contig12472.1533.1 vs. uniprot
Match: A0A7S2CG88_9STRA (Purple acid phosphatase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CG88_9STRA) HSP 1 Score: 151 bits (382), Expect = 1.190e-41 Identity = 68/130 (52.31%), Postives = 90/130 (69.23%), Query Frame = 1
Query: 22 DLESTDRTLTPWVVVMMHCPWYNSNLAHQGERQAETAMRAIEPIFYEHKVAVVIAGHVHAYERSHPVVDFGITE--DGPVYLVVGGAGNREGHAGSEFYPTPEWSAFRDGKVYGSGRLSVQGSSLALWEW 405
DL + +R TPWV V+ HCPWYNS+ HQ E QA + A+EP+F ++V V GHVHAYER+HP+V G+ + G VY+VVG GNREGHA P P+WSA+R+G +G GRL++ +S+ALWEW
Sbjct: 264 DLSAVNRVKTPWVFVLFHCPWYNSDDDHQDEFQAVSMQAALEPVFLNYRVNAVFTGHVHAYERTHPLVLDGVVDVSRGIVYVVVGDGGNREGHADDYNTPPPDWSAYRNGSAFGHGRLTLYNASVALWEW 393
BLAST of mRNA_S-dermatodea_contig12472.1533.1 vs. uniprot
Match: A0A482RNP1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RNP1_9ARCH) HSP 1 Score: 149 bits (377), Expect = 3.840e-41 Identity = 65/129 (50.39%), Postives = 86/129 (66.67%), Query Frame = 1
Query: 19 QDLESTDRTLTPWVVVMMHCPWYNSNLAHQGERQAETAMRAIEPIFYEHKVAVVIAGHVHAYERSHPVVDFGITEDGPVYLVVGGAGNREGHAGSEFYPTPEWSAFRDGKVYGSGRLSVQGSSLALWEW 405
QDL+ +R +TPWV+V+MHCPWYNSN AH GE QA ++E +FY+++V +V GHVHAYER++PV DG VY+ +G GNREGHA + +Y P WSA+R+G YG G LS+ W W
Sbjct: 231 QDLQGVNREVTPWVIVVMHCPWYNSNQAHYGELQAVLMRESMEEVFYKNRVNIVFTGHVHAYERTYPVFRNETRSDGVVYVTIGDGGNREGHANT-YYEQPSWSAYRNGTQYGHGELSLWSRDKLTWRW 358
BLAST of mRNA_S-dermatodea_contig12472.1533.1 vs. uniprot
Match: A0A835YVM8_9STRA (Purple acid phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVM8_9STRA) HSP 1 Score: 145 bits (365), Expect = 7.630e-39 Identity = 65/128 (50.78%), Postives = 88/128 (68.75%), Query Frame = 1
Query: 22 DLESTDRTLTPWVVVMMHCPWYNSNLAHQGERQAETAMRAIEPIFYEHKVAVVIAGHVHAYERSHPVVDFGITEDGPVYLVVGGAGNREGHAGSEFYPTPEWSAFRDGKVYGSGRLSVQGSSLALWEW 405
DL + DR++TPW++V+ HCPWYNSN AHQ E QA ++E + + + A+VI+GHVHAYER+HPV + + PVY+V+G GNREGHA + P P WSA RD +G GRL+V ++ A WEW
Sbjct: 302 DLAALDRSVTPWLIVITHCPWYNSNFAHQLESQAVAMKESMEGMIADARAALVISGHVHAYERTHPVRGWARRDGAPVYIVIGDGGNREGHARGLYAP-PHWSAARDDGAFGHGRLAVANATHARWEW 428
BLAST of mRNA_S-dermatodea_contig12472.1533.1 vs. uniprot
Match: A0A225X3X7_9STRA (Purple acid phosphatase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X3X7_9STRA) HSP 1 Score: 145 bits (365), Expect = 8.790e-39 Identity = 69/130 (53.08%), Postives = 89/130 (68.46%), Query Frame = 1
Query: 16 RQDLESTDRTLTPWVVVMMHCPWYNSNLAHQGERQAETAMRAIEPIFYEHKVAVVIAGHVHAYERSHPVVDFGITEDGPVYLVVGGAGNREGHAGSEFYPTPEWSAFRDGKVYGSGRLSVQGSSLALWEW 405
+Q+ + DR++TPWVVV+MH PWYNSN AHQG + +E I Y +KV V++AGHVHAYERSHPV + + +DGPVY+V+G AGNREG A + F P PEWSAFR YG L+V + A +W
Sbjct: 305 QQEFQRVDRSITPWVVVIMHGPWYNSNTAHQGMEPHMGMKKNMEDILYRNKVDVIVAGHVHAYERSHPVYEEKVVQDGPVYVVLGDAGNREGLAPTYFDPQPEWSAFRQAD-YGFSMLNVINRTHANMQW 433
BLAST of mRNA_S-dermatodea_contig12472.1533.1 vs. uniprot
Match: A0A3F2S309_9STRA (Purple acid phosphatase n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S309_9STRA) HSP 1 Score: 141 bits (356), Expect = 6.670e-38 Identity = 70/129 (54.26%), Postives = 85/129 (65.89%), Query Frame = 1
Query: 19 QDLESTDRTLTPWVVVMMHCPWYNSNLAHQGERQAETAMRAIEPIFYEHKVAVVIAGHVHAYERSHPVVDFGITEDGPVYLVVGGAGNREGHAGSEFYPTPEWSAFRDGKVYGSGRLSVQGSSLALWEW 405
Q+L DR++TPWVVV+MH PWYNSN AHQG + +E +FY +KV + IAGHVHAYERSHPV + EDG VY+V+G AGNREG A S F P P+WSAFR YG L V + A +W
Sbjct: 250 QELLRVDRSVTPWVVVIMHGPWYNSNTAHQGMEPHMIMKKHMEELFYHYKVDLAIAGHVHAYERSHPVYKEKVQEDGTVYVVLGDAGNREGLAPSYFNPQPDWSAFRQAD-YGYSLLKVLNRTHATMQW 377
BLAST of mRNA_S-dermatodea_contig12472.1533.1 vs. uniprot
Match: A0A2P4X806_9STRA (Purple acid phosphatase n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X806_9STRA) HSP 1 Score: 142 bits (358), Expect = 8.900e-38 Identity = 69/130 (53.08%), Postives = 87/130 (66.92%), Query Frame = 1
Query: 16 RQDLESTDRTLTPWVVVMMHCPWYNSNLAHQGERQAETAMRAIEPIFYEHKVAVVIAGHVHAYERSHPVVDFGITEDGPVYLVVGGAGNREGHAGSEFYPTPEWSAFRDGKVYGSGRLSVQGSSLALWEW 405
+Q+ + DR++TPW+VV+MH PWYNSN AHQG + +E I Y +KV VV+AGHVHAYERSHPV + ED P+Y+V+G AGNREG A + F P PEWSAFR YG L+V + A EW
Sbjct: 305 QQEFQRVDRSITPWLVVIMHGPWYNSNTAHQGLEPHMIMKKNMEDILYRNKVDVVVAGHVHAYERSHPVYKEKVVEDAPIYVVLGDAGNREGLAPTYFDPQPEWSAFRQAD-YGFSVLNVVNRTHANMEW 433
BLAST of mRNA_S-dermatodea_contig12472.1533.1 vs. uniprot
Match: H3GBF7_PHYRM (Purple acid phosphatase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GBF7_PHYRM) HSP 1 Score: 141 bits (356), Expect = 1.740e-37 Identity = 68/130 (52.31%), Postives = 87/130 (66.92%), Query Frame = 1
Query: 16 RQDLESTDRTLTPWVVVMMHCPWYNSNLAHQGERQAETAMRAIEPIFYEHKVAVVIAGHVHAYERSHPVVDFGITEDGPVYLVVGGAGNREGHAGSEFYPTPEWSAFRDGKVYGSGRLSVQGSSLALWEW 405
+Q+ + DR++TPW+VV+MH PWYNSN AHQG + +E I Y +KV VV++GHVHAYERSHPV + ED PVY+V+G AGNREG A + F P PEWSAFR YG L+V + A +W
Sbjct: 307 QQEFQRVDRSVTPWLVVIMHGPWYNSNTAHQGMEPHMIMKKNMEDILYRNKVDVVVSGHVHAYERSHPVYKQKVVEDAPVYVVLGDAGNREGLAPTYFDPQPEWSAFRQAD-YGFSLLNVANRTHASMQW 435 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12472.1533.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig12472.1533.1 >prot_S-dermatodea_contig12472.1533.1 ID=prot_S-dermatodea_contig12472.1533.1|Name=mRNA_S-dermatodea_contig12472.1533.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=135bp MLCCRRQDLESTDRTLTPWVVVMMHCPWYNSNLAHQGERQAETAMRAIEPback to top mRNA from alignment at S-dermatodea_contig12472:5689..6924- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig12472.1533.1 ID=mRNA_S-dermatodea_contig12472.1533.1|Name=mRNA_S-dermatodea_contig12472.1533.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1236bp|location=Sequence derived from alignment at S-dermatodea_contig12472:5689..6924- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig12472:5689..6924- >mRNA_S-dermatodea_contig12472.1533.1 ID=mRNA_S-dermatodea_contig12472.1533.1|Name=mRNA_S-dermatodea_contig12472.1533.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=810bp|location=Sequence derived from alignment at S-dermatodea_contig12472:5689..6924- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |