mRNA_S-dermatodea_contig12463.1528.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig12463.1528.1 vs. uniprot
Match: D7G6W1_ECTSI (Spindle pole body component n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6W1_ECTSI) HSP 1 Score: 277 bits (708), Expect = 2.650e-81 Identity = 142/192 (73.96%), Postives = 168/192 (87.50%), Query Frame = 2
Query: 2 LERTLPELQGALHRCSLIRGQMFFLTTNLSNFVMFEVLETSWGTLQERLDSALTLDDIIEAHHTYLSDIMGRAMLHPDSKDVSDKLEEVLSIIIEFCSHQETLVIRAMAEVTTQRAEQNEKERRTARGQWGTEAESAGGSRRLGKDQFGMSSIEDTARRYEEKLSDLVRLLEEKSGKTEILRFLTFRLDFND 577
LE+ LPEL+GALHRCSLIRGQMFFLTTNLSN++MFEVLETSWGTLQ+ LDSALTLDDII+AH Y+ I+ RAML+ +S DV +K+EEVL III+FC HQE+LVIRAMAEVTT+RAEQ +K+RRTA GQWGTE ++A G RRLG+D FGM +IEDTARR+EEKLS+L +LE+K GK EILRFL FRLDFN+
Sbjct: 691 LEQALPELRGALHRCSLIRGQMFFLTTNLSNYMMFEVLETSWGTLQKSLDSALTLDDIIQAHKAYMKGILARAMLNEESTDVKNKVEEVLGIIIDFCRHQESLVIRAMAEVTTRRAEQADKDRRTAMGQWGTEDDTAQGGRRLGRDPFGMGNIEDTARRFEEKLSELRCMLEQKCGKMEILRFLIFRLDFNE 882
BLAST of mRNA_S-dermatodea_contig12463.1528.1 vs. uniprot
Match: A0A7S2MB43_9STRA (Spindle pole body component n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MB43_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.870e-29 Identity = 77/195 (39.49%), Postives = 109/195 (55.90%), Query Frame = 2
Query: 2 LERTLPELQGALHRCSLIRGQMFFLTTNLSNFVMFEVLETSWGTLQERLDSALTLDDIIEAHHTYLSDIMGRAMLHPDSKDVSDKLEEVLSIIIEFCSHQETLVIRAMAEVTTQRAEQNEKERRTARGQWGTEAESAGGSRRLGKDQFGMSSIEDTARRYEEKLSDLVRLLEEKSGKTEILRFLTFRLDFNDYYK 586
L +P L LH +L R M+ L TNLSN++MFEVLE SW TLQ++L++A LD++I AH+ YL I+ +A+L D+K+V DKL VL ++I FC Q+ + + A EVT ++ E E+R G WG + E G + + + Y E+ L +L L FL FRLDFN+YYK
Sbjct: 459 LSEKIPLLSRDLHSANLTRNAMWHLITNLSNYMMFEVLEESWTTLQKQLNAAENLDEVIGAHNEYLEAIIQKALLDEDTKEVLDKLHSVLDLVIRFCQVQDEIFVDAFTEVTRRQELSKELEKR---GDWGLDLEPD-----AGVSDGTLHKLRSLTKDYNEEFESLTEVLVMTKSSNRNLSFLNFRLDFNNYYK 645
BLAST of mRNA_S-dermatodea_contig12463.1528.1 vs. uniprot
Match: A0A067C8N6_SAPPC (Spindle pole body component n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C8N6_SAPPC) HSP 1 Score: 126 bits (316), Expect = 1.110e-27 Identity = 76/199 (38.19%), Postives = 107/199 (53.77%), Query Frame = 2
Query: 2 LERTLPELQGALHRCSLIRGQMFFLTTNLSNFVMFEVLETSWGTLQERLDSALTLDDIIEAHHTYLSDIMGRAMLHPDSKDVSDKLEEVLSIIIEFCSHQETLVIRAMAEVTTQRAEQNEKERRTARGQWGTEAESAGGSRRLGKDQFGMSSIEDTARRYEEKLSDLVRLLEEKSGKTEILRFLTFRLDFNDYYKERRA 598
+ +TLPE + +H C+L+R +M TTNL N++MFEVLETSW TL + + +A LD++I AHH YL I A L +SK + +L+ + II FC Q++L AM E R Q K+R G WG ++ + A Y L+ +L+ S +E L FLTFRLDFN+YY +RA
Sbjct: 505 ISKTLPEARAVMHHCNLLRSEMIHFTTNLHNYMMFEVLETSWHTLLKNVQAASDLDELIAAHHAYLYTIKKNAFLMDESKPMLLQLKLIFDTIITFCKLQDSLYTSAMREAHVLR--QQAKDRH---GDWGISVHDRSTPSVFAPHSAYVTQMRTIATDYNAHFQSLLEILKSHSIGSENLPFLTFRLDFNEYYARKRA 698
BLAST of mRNA_S-dermatodea_contig12463.1528.1 vs. uniprot
Match: A0A835YR49_9STRA (Spindle pole body component n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR49_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.140e-27 Identity = 87/231 (37.66%), Postives = 121/231 (52.38%), Query Frame = 2
Query: 23 LQGALHRCSLIRGQMFFLTTNLSNFVMFEVLETSWGTLQERLDSALTLDDIIEAHHTYLSDIMGR--------------------------------AMLHPD--SKDVSDKLEEVLSIIIEFCSHQETLVIRAMAEVTTQRAEQNEKERRTARGQWGTEAESAGGSRRL-----GKDQFGMSSIEDTARRYEEKLSDLVRLLEEKSGKTEILRFLTFRLDFNDYYKERRA 598
L+ +H +L+R QM NLS+++MFEVLE W LQ L A LD +I AH+ YL+ I+ + A+L P +K + KL EVL II++C+HQET++I+A+AEV R E RRTA G WG E G R L G + ++ + +T RRYE S+L+ +LE +S ++EILR L FRLDFN Y+ R A
Sbjct: 804 LRAPMHTSALLRAQMTHFAANLSSYMMFEVLEGGWQALQGALGEARDLDSVIAAHNQYLAKILDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLGPSPAAKAMLLKLHEVLRSIIDYCAHQETMLIQALAEVAANREESANAARRTAAGGWGLEV---GAERYLYPKGAGVQERTLAHLAETGRRYERAFSELLVMLETESVRSEILRHLVFRLDFNLYHSRRAA 1031
BLAST of mRNA_S-dermatodea_contig12463.1528.1 vs. uniprot
Match: A0A1V9YEE9_9STRA (Spindle pole body component n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YEE9_9STRA) HSP 1 Score: 122 bits (307), Expect = 1.860e-26 Identity = 73/197 (37.06%), Postives = 106/197 (53.81%), Query Frame = 2
Query: 2 LERTLPELQGALHRCSLIRGQMFFLTTNLSNFVMFEVLETSWGTLQERLDSALTLDDIIEAHHTYLSDIMGRAMLHPDSKDVSDKLEEVLSIIIEFCSHQETLVIRAMAEVTTQRAEQNEKERRTARGQWGTEAESAGGSRRLGKDQFGMSSIEDTARRYEEKLSDLVRLLEEKSGKTEILRFLTFRLDFNDYYKER 592
+ + LPE +G +H C+L+R +M TTNL N++MFEVLETSW TL + + A LD++IE+H+ YL I A L +SK + +L+ + II FC Q++L AM EV T R ++E G WG S ++ + A Y L+ +L S +E L FLTFRLDFN++Y +
Sbjct: 588 ISKHLPEARGVIHHCNLLRSEMIHFTTNLHNYMMFEVLETSWHTLLKNIKMASDLDELIESHNAYLYTIKKNAFLMDESKPMLLQLKLIFDTIIMFCKLQDSLYTSAMREVHTARQVAKDRE-----GDWGMSVHDRVASSVFAPSSAFVAQLRTVASDYNAHFLKLLEVLRTHSIGSENLPFLTFRLDFNEFYARK 779
BLAST of mRNA_S-dermatodea_contig12463.1528.1 vs. uniprot
Match: K3WEA1_GLOUD (Spindle pole body component n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEA1_GLOUD) HSP 1 Score: 120 bits (301), Expect = 1.280e-25 Identity = 71/203 (34.98%), Postives = 116/203 (57.14%), Query Frame = 2
Query: 2 LERTLPELQGALHRCSLIRGQMFFLTTNLSNFVMFEVLETSWGTLQERLDSALTLDDIIEAHHTYLSDIMGRAMLHPDSKDVSDKLEEVLSIIIEFCSHQETLVIRAMAEVTTQRAEQNEKERRTARGQWGTEAESAGGSRRLGKDQFGMSS-----IEDTARRYEEKLSDLVRLLEEKS-GKTEILRFLTFRLDFNDYYKER 592
++ LP + +H+C L+R +M T+NL N++MFEVLETSW L + L +A LD++IE+H Y++ I + DS+++ +L+ + II F QE L A+ EV ++ Q E+RT G WGT +E + R + FG +S IED A + +L L+ ++ E++ G ++ L FL + DFN+YY+ +
Sbjct: 789 IQGRLPNITPIIHKCQLLRSEMIHFTSNLHNYMMFEVLETSWHKLVKDLKAAKDLDELIESHEEYIAAIKKNGFMAKDSRELLTQLKMIFDTIIMFSKTQENLYTTALKEVHEEKMRQQAIEKRTLEGTWGT-SEIEADTERKRNNAFGPNSKIVCQIEDIANNFSTQLLGLLEMIRERAAGGSQGLPFLISQFDFNEYYRSK 990
BLAST of mRNA_S-dermatodea_contig12463.1528.1 vs. uniprot
Match: A0A8K1FH84_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FH84_PYTOL) HSP 1 Score: 117 bits (293), Expect = 1.340e-24 Identity = 69/201 (34.33%), Postives = 116/201 (57.71%), Query Frame = 2
Query: 2 LERTLPELQGALHRCSLIRGQMFFLTTNLSNFVMFEVLETSWGTLQERLDSALTLDDIIEAHHTYLSDIMGRAMLHPDSKDVSDKLEEVLSIIIEFCSHQETLVIRAMAEVTTQRAEQNEKERRTARGQWGTEAESAGGSRRLGKDQFGMSS-----IEDTARRYEEKLSDLVRLLEEKSGKT-EILRFLTFRLDFNDYYK 586
++R E + +HRC L+R +M TT L N+VMFEVLETSW L + L +A LD++I +H YLS I + ++ ++D+ ++L+ + I++FC Q+ L A+ EV ++ + E+RTA+G WG AE + + K+ FG S I D + + ++ L+++L ++G + + L L R DFN+YY+
Sbjct: 743 IKRDFVEFRPLIHRCQLLRSEMIQFTTTLHNYVMFEVLETSWHKLVKDLKAAKDLDELISSHEDYLSTIREKGFMNESTRDLLNQLKVIFDTILKFCRAQDNLYTSAIREVDSEATRRKTIEKRTAQGTWGI-AEGDEQAEQARKETFGPGSLIYRQITDINKDFTTQVGSLLQMLATRTGSSLQSLSSLMIRFDFNEYYQ 942
BLAST of mRNA_S-dermatodea_contig12463.1528.1 vs. uniprot
Match: A0A7S3H0B4_9STRA (Spindle pole body component n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H0B4_9STRA) HSP 1 Score: 109 bits (272), Expect = 3.230e-24 Identity = 61/178 (34.27%), Postives = 97/178 (54.49%), Query Frame = 2
Query: 65 MFFLTTNLSNFVMFEVLETSWGTLQERLDSALTLDDIIEAHHTYLSDIMGRAMLHPDSKDVSDKLEEVLSIIIEFCSHQETLVIRAMAEVTTQRAEQNEKERRTARGQWGTEAESAGGSRRLGKDQFGMSSIEDTARRYEEKLSDLVRLLEEKSGKTEILRFLTFRLDFNDYYKERRA 598
M + NL F+MFEVLETSW LQE + A +DD+I AH YLS+++ RA+L P ++++ +++++L I++ FC+ +ETL+ ++ +S I++ + Y + L+ +L+E+S KTE LRFLTFRLDFNDY+ +RA
Sbjct: 2 MMHVVNNLCAFLMFEVLETSWVKLQETIGRARCVDDVITAHDAYLSEVLDRALLAPHHEELNLQIQQLLHIVLRFCNLEETLIA-----------------------------------------EYVVSRIDEAVKEYSTQFEKLMFMLKEQSEKTEYLRFLTFRLDFNDYHAHQRA 138
BLAST of mRNA_S-dermatodea_contig12463.1528.1 vs. uniprot
Match: A0A1W0A3C8_9STRA (Gamma-tubulin complex component n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A3C8_9STRA) HSP 1 Score: 116 bits (290), Expect = 3.800e-24 Identity = 76/198 (38.38%), Postives = 110/198 (55.56%), Query Frame = 2
Query: 2 LERTLPELQGALHRCSLIRGQMFFLTTNLSNFVMFEVLETSWGTLQERLDSALTLDDIIEAHHTYLSDIMGRAMLHPDSKDVSDKLEEVLSIIIEFCSHQETLVIRAMAEVTTQRAEQNEKERRTARGQWGTEAESAGGSRRLGKDQFGMSSIEDTARRYEEKLSDLVRLLEEKSGKTEILRFLTFRLDFNDYYKERR 595
+++ LPE + +H+C+LIR +M TTNL N++MFEVLETSW TL + + SA LD++IE+H+ YL I A L +S+ + +L+ + II FC ++L A A Q EQ EK R+ G WG S + + A Y L L+ +L+ +S +E L FLTFRLDFN+YY +R
Sbjct: 883 IKKYLPESRPIIHQCNLIRSEMIHFTTNLHNYMMFEVLETSWHTLIKSIRSATDLDELIESHNAYLYTIKKNAFLMDESRPMLLQLKLIFDTIITFCKLLDSLY--ATASRDAQVLEQREKNRQ---GDWGMSVHDPIPSSVFNPASSFVIQMNTIANDYSVHLLALLDILKSQSIGSENLPFLTFRLDFNEYYARKR 1075
BLAST of mRNA_S-dermatodea_contig12463.1528.1 vs. uniprot
Match: A0A3R7JQA7_9STRA (Spindle pole body component n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JQA7_9STRA) HSP 1 Score: 114 bits (284), Expect = 8.380e-24 Identity = 71/204 (34.80%), Postives = 114/204 (55.88%), Query Frame = 2
Query: 2 LERTLPELQGALHRCSLIRGQMFFLTTNLSNFVMFEVLETSWGTLQERLDSALTLDDIIEAHHTYLSDIMGRAMLHPDSKDVSDKLEEVLSIIIEFCSHQETLVIRAMAEVTTQRAEQNEKERRTARGQWGT-EAESAGGSRRLGKDQFGMSS-----IEDTARRYEEKLSDLVRLLEEKSGKT-EILRFLTFRLDFNDYYKER 592
++ LP + LH+C L+R +M TTNL N++MFEVLET+W L + L++A LD +IE+H Y+S I + +S+++ L+ + + II+FC QE L A+ EV + Q ER+ G WG E E G + G FG S +E+ A + ++ L+ +++E S ++ + L FL R DFN+YY ++
Sbjct: 314 VQGRLPGIGAVLHKCQLLRSEMIHFTTNLLNYMMFEVLETAWHKLVKDLNAAKDLDGLIESHAAYISSIKKNGFMMKESRELLKHLKLIFATIIKFCKAQENLYTTALKEVHEENMRQQMIERQELEGTWGIPEDEEYGAHSQRGA--FGAHSKIVRQLEEIAHDFNDQFLGLLDIVKETSNRSSQSLPFLMSRFDFNEYYHQK 515 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12463.1528.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig12463.1528.1 >prot_S-dermatodea_contig12463.1528.1 ID=prot_S-dermatodea_contig12463.1528.1|Name=mRNA_S-dermatodea_contig12463.1528.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=203bp MFFLTTNLSNFVMFEVLETSWGTLQERLDSALTLDDIIEAHHTYLSDIMGback to top mRNA from alignment at S-dermatodea_contig12463:1680..4972+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig12463.1528.1 ID=mRNA_S-dermatodea_contig12463.1528.1|Name=mRNA_S-dermatodea_contig12463.1528.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3293bp|location=Sequence derived from alignment at S-dermatodea_contig12463:1680..4972+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig12463:1680..4972+ >mRNA_S-dermatodea_contig12463.1528.1 ID=mRNA_S-dermatodea_contig12463.1528.1|Name=mRNA_S-dermatodea_contig12463.1528.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1218bp|location=Sequence derived from alignment at S-dermatodea_contig12463:1680..4972+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |