mRNA_S-dermatodea_contig12463.1528.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig12463.1528.1
Unique NamemRNA_S-dermatodea_contig12463.1528.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig12463.1528.1 vs. uniprot
Match: D7G6W1_ECTSI (Spindle pole body component n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6W1_ECTSI)

HSP 1 Score: 277 bits (708), Expect = 2.650e-81
Identity = 142/192 (73.96%), Postives = 168/192 (87.50%), Query Frame = 2
Query:    2 LERTLPELQGALHRCSLIRGQMFFLTTNLSNFVMFEVLETSWGTLQERLDSALTLDDIIEAHHTYLSDIMGRAMLHPDSKDVSDKLEEVLSIIIEFCSHQETLVIRAMAEVTTQRAEQNEKERRTARGQWGTEAESAGGSRRLGKDQFGMSSIEDTARRYEEKLSDLVRLLEEKSGKTEILRFLTFRLDFND 577
            LE+ LPEL+GALHRCSLIRGQMFFLTTNLSN++MFEVLETSWGTLQ+ LDSALTLDDII+AH  Y+  I+ RAML+ +S DV +K+EEVL III+FC HQE+LVIRAMAEVTT+RAEQ +K+RRTA GQWGTE ++A G RRLG+D FGM +IEDTARR+EEKLS+L  +LE+K GK EILRFL FRLDFN+
Sbjct:  691 LEQALPELRGALHRCSLIRGQMFFLTTNLSNYMMFEVLETSWGTLQKSLDSALTLDDIIQAHKAYMKGILARAMLNEESTDVKNKVEEVLGIIIDFCRHQESLVIRAMAEVTTRRAEQADKDRRTAMGQWGTEDDTAQGGRRLGRDPFGMGNIEDTARRFEEKLSELRCMLEQKCGKMEILRFLIFRLDFNE 882          
BLAST of mRNA_S-dermatodea_contig12463.1528.1 vs. uniprot
Match: A0A7S2MB43_9STRA (Spindle pole body component n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MB43_9STRA)

HSP 1 Score: 131 bits (329), Expect = 1.870e-29
Identity = 77/195 (39.49%), Postives = 109/195 (55.90%), Query Frame = 2
Query:    2 LERTLPELQGALHRCSLIRGQMFFLTTNLSNFVMFEVLETSWGTLQERLDSALTLDDIIEAHHTYLSDIMGRAMLHPDSKDVSDKLEEVLSIIIEFCSHQETLVIRAMAEVTTQRAEQNEKERRTARGQWGTEAESAGGSRRLGKDQFGMSSIEDTARRYEEKLSDLVRLLEEKSGKTEILRFLTFRLDFNDYYK 586
            L   +P L   LH  +L R  M+ L TNLSN++MFEVLE SW TLQ++L++A  LD++I AH+ YL  I+ +A+L  D+K+V DKL  VL ++I FC  Q+ + + A  EVT ++    E E+R   G WG + E        G     +  +    + Y E+   L  +L         L FL FRLDFN+YYK
Sbjct:  459 LSEKIPLLSRDLHSANLTRNAMWHLITNLSNYMMFEVLEESWTTLQKQLNAAENLDEVIGAHNEYLEAIIQKALLDEDTKEVLDKLHSVLDLVIRFCQVQDEIFVDAFTEVTRRQELSKELEKR---GDWGLDLEPD-----AGVSDGTLHKLRSLTKDYNEEFESLTEVLVMTKSSNRNLSFLNFRLDFNNYYK 645          
BLAST of mRNA_S-dermatodea_contig12463.1528.1 vs. uniprot
Match: A0A067C8N6_SAPPC (Spindle pole body component n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C8N6_SAPPC)

HSP 1 Score: 126 bits (316), Expect = 1.110e-27
Identity = 76/199 (38.19%), Postives = 107/199 (53.77%), Query Frame = 2
Query:    2 LERTLPELQGALHRCSLIRGQMFFLTTNLSNFVMFEVLETSWGTLQERLDSALTLDDIIEAHHTYLSDIMGRAMLHPDSKDVSDKLEEVLSIIIEFCSHQETLVIRAMAEVTTQRAEQNEKERRTARGQWGTEAESAGGSRRLGKDQFGMSSIEDTARRYEEKLSDLVRLLEEKSGKTEILRFLTFRLDFNDYYKERRA 598
            + +TLPE +  +H C+L+R +M   TTNL N++MFEVLETSW TL + + +A  LD++I AHH YL  I   A L  +SK +  +L+ +   II FC  Q++L   AM E    R  Q  K+R    G WG                  ++ +   A  Y      L+ +L+  S  +E L FLTFRLDFN+YY  +RA
Sbjct:  505 ISKTLPEARAVMHHCNLLRSEMIHFTTNLHNYMMFEVLETSWHTLLKNVQAASDLDELIAAHHAYLYTIKKNAFLMDESKPMLLQLKLIFDTIITFCKLQDSLYTSAMREAHVLR--QQAKDRH---GDWGISVHDRSTPSVFAPHSAYVTQMRTIATDYNAHFQSLLEILKSHSIGSENLPFLTFRLDFNEYYARKRA 698          
BLAST of mRNA_S-dermatodea_contig12463.1528.1 vs. uniprot
Match: A0A835YR49_9STRA (Spindle pole body component n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR49_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.140e-27
Identity = 87/231 (37.66%), Postives = 121/231 (52.38%), Query Frame = 2
Query:   23 LQGALHRCSLIRGQMFFLTTNLSNFVMFEVLETSWGTLQERLDSALTLDDIIEAHHTYLSDIMGR--------------------------------AMLHPD--SKDVSDKLEEVLSIIIEFCSHQETLVIRAMAEVTTQRAEQNEKERRTARGQWGTEAESAGGSRRL-----GKDQFGMSSIEDTARRYEEKLSDLVRLLEEKSGKTEILRFLTFRLDFNDYYKERRA 598
            L+  +H  +L+R QM     NLS+++MFEVLE  W  LQ  L  A  LD +I AH+ YL+ I+ +                                A+L P   +K +  KL EVL  II++C+HQET++I+A+AEV   R E     RRTA G WG E    G  R L     G  +  ++ + +T RRYE   S+L+ +LE +S ++EILR L FRLDFN Y+  R A
Sbjct:  804 LRAPMHTSALLRAQMTHFAANLSSYMMFEVLEGGWQALQGALGEARDLDSVIAAHNQYLAKILDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLGPSPAAKAMLLKLHEVLRSIIDYCAHQETMLIQALAEVAANREESANAARRTAAGGWGLEV---GAERYLYPKGAGVQERTLAHLAETGRRYERAFSELLVMLETESVRSEILRHLVFRLDFNLYHSRRAA 1031          
BLAST of mRNA_S-dermatodea_contig12463.1528.1 vs. uniprot
Match: A0A1V9YEE9_9STRA (Spindle pole body component n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YEE9_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.860e-26
Identity = 73/197 (37.06%), Postives = 106/197 (53.81%), Query Frame = 2
Query:    2 LERTLPELQGALHRCSLIRGQMFFLTTNLSNFVMFEVLETSWGTLQERLDSALTLDDIIEAHHTYLSDIMGRAMLHPDSKDVSDKLEEVLSIIIEFCSHQETLVIRAMAEVTTQRAEQNEKERRTARGQWGTEAESAGGSRRLGKDQFGMSSIEDTARRYEEKLSDLVRLLEEKSGKTEILRFLTFRLDFNDYYKER 592
            + + LPE +G +H C+L+R +M   TTNL N++MFEVLETSW TL + +  A  LD++IE+H+ YL  I   A L  +SK +  +L+ +   II FC  Q++L   AM EV T R    ++E     G WG        S         ++ +   A  Y      L+ +L   S  +E L FLTFRLDFN++Y  +
Sbjct:  588 ISKHLPEARGVIHHCNLLRSEMIHFTTNLHNYMMFEVLETSWHTLLKNIKMASDLDELIESHNAYLYTIKKNAFLMDESKPMLLQLKLIFDTIIMFCKLQDSLYTSAMREVHTARQVAKDRE-----GDWGMSVHDRVASSVFAPSSAFVAQLRTVASDYNAHFLKLLEVLRTHSIGSENLPFLTFRLDFNEFYARK 779          
BLAST of mRNA_S-dermatodea_contig12463.1528.1 vs. uniprot
Match: K3WEA1_GLOUD (Spindle pole body component n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEA1_GLOUD)

HSP 1 Score: 120 bits (301), Expect = 1.280e-25
Identity = 71/203 (34.98%), Postives = 116/203 (57.14%), Query Frame = 2
Query:    2 LERTLPELQGALHRCSLIRGQMFFLTTNLSNFVMFEVLETSWGTLQERLDSALTLDDIIEAHHTYLSDIMGRAMLHPDSKDVSDKLEEVLSIIIEFCSHQETLVIRAMAEVTTQRAEQNEKERRTARGQWGTEAESAGGSRRLGKDQFGMSS-----IEDTARRYEEKLSDLVRLLEEKS-GKTEILRFLTFRLDFNDYYKER 592
            ++  LP +   +H+C L+R +M   T+NL N++MFEVLETSW  L + L +A  LD++IE+H  Y++ I     +  DS+++  +L+ +   II F   QE L   A+ EV  ++  Q   E+RT  G WGT +E    + R   + FG +S     IED A  +  +L  L+ ++ E++ G ++ L FL  + DFN+YY+ +
Sbjct:  789 IQGRLPNITPIIHKCQLLRSEMIHFTSNLHNYMMFEVLETSWHKLVKDLKAAKDLDELIESHEEYIAAIKKNGFMAKDSRELLTQLKMIFDTIIMFSKTQENLYTTALKEVHEEKMRQQAIEKRTLEGTWGT-SEIEADTERKRNNAFGPNSKIVCQIEDIANNFSTQLLGLLEMIRERAAGGSQGLPFLISQFDFNEYYRSK 990          
BLAST of mRNA_S-dermatodea_contig12463.1528.1 vs. uniprot
Match: A0A8K1FH84_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FH84_PYTOL)

HSP 1 Score: 117 bits (293), Expect = 1.340e-24
Identity = 69/201 (34.33%), Postives = 116/201 (57.71%), Query Frame = 2
Query:    2 LERTLPELQGALHRCSLIRGQMFFLTTNLSNFVMFEVLETSWGTLQERLDSALTLDDIIEAHHTYLSDIMGRAMLHPDSKDVSDKLEEVLSIIIEFCSHQETLVIRAMAEVTTQRAEQNEKERRTARGQWGTEAESAGGSRRLGKDQFGMSS-----IEDTARRYEEKLSDLVRLLEEKSGKT-EILRFLTFRLDFNDYYK 586
            ++R   E +  +HRC L+R +M   TT L N+VMFEVLETSW  L + L +A  LD++I +H  YLS I  +  ++  ++D+ ++L+ +   I++FC  Q+ L   A+ EV ++   +   E+RTA+G WG  AE    + +  K+ FG  S     I D  + +  ++  L+++L  ++G + + L  L  R DFN+YY+
Sbjct:  743 IKRDFVEFRPLIHRCQLLRSEMIQFTTTLHNYVMFEVLETSWHKLVKDLKAAKDLDELISSHEDYLSTIREKGFMNESTRDLLNQLKVIFDTILKFCRAQDNLYTSAIREVDSEATRRKTIEKRTAQGTWGI-AEGDEQAEQARKETFGPGSLIYRQITDINKDFTTQVGSLLQMLATRTGSSLQSLSSLMIRFDFNEYYQ 942          
BLAST of mRNA_S-dermatodea_contig12463.1528.1 vs. uniprot
Match: A0A7S3H0B4_9STRA (Spindle pole body component n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H0B4_9STRA)

HSP 1 Score: 109 bits (272), Expect = 3.230e-24
Identity = 61/178 (34.27%), Postives = 97/178 (54.49%), Query Frame = 2
Query:   65 MFFLTTNLSNFVMFEVLETSWGTLQERLDSALTLDDIIEAHHTYLSDIMGRAMLHPDSKDVSDKLEEVLSIIIEFCSHQETLVIRAMAEVTTQRAEQNEKERRTARGQWGTEAESAGGSRRLGKDQFGMSSIEDTARRYEEKLSDLVRLLEEKSGKTEILRFLTFRLDFNDYYKERRA 598
            M  +  NL  F+MFEVLETSW  LQE +  A  +DD+I AH  YLS+++ RA+L P  ++++ +++++L I++ FC+ +ETL+                                          ++ +S I++  + Y  +   L+ +L+E+S KTE LRFLTFRLDFNDY+  +RA
Sbjct:    2 MMHVVNNLCAFLMFEVLETSWVKLQETIGRARCVDDVITAHDAYLSEVLDRALLAPHHEELNLQIQQLLHIVLRFCNLEETLIA-----------------------------------------EYVVSRIDEAVKEYSTQFEKLMFMLKEQSEKTEYLRFLTFRLDFNDYHAHQRA 138          
BLAST of mRNA_S-dermatodea_contig12463.1528.1 vs. uniprot
Match: A0A1W0A3C8_9STRA (Gamma-tubulin complex component n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A3C8_9STRA)

HSP 1 Score: 116 bits (290), Expect = 3.800e-24
Identity = 76/198 (38.38%), Postives = 110/198 (55.56%), Query Frame = 2
Query:    2 LERTLPELQGALHRCSLIRGQMFFLTTNLSNFVMFEVLETSWGTLQERLDSALTLDDIIEAHHTYLSDIMGRAMLHPDSKDVSDKLEEVLSIIIEFCSHQETLVIRAMAEVTTQRAEQNEKERRTARGQWGTEAESAGGSRRLGKDQFGMSSIEDTARRYEEKLSDLVRLLEEKSGKTEILRFLTFRLDFNDYYKERR 595
            +++ LPE +  +H+C+LIR +M   TTNL N++MFEVLETSW TL + + SA  LD++IE+H+ YL  I   A L  +S+ +  +L+ +   II FC   ++L   A A    Q  EQ EK R+   G WG        S         +  +   A  Y   L  L+ +L+ +S  +E L FLTFRLDFN+YY  +R
Sbjct:  883 IKKYLPESRPIIHQCNLIRSEMIHFTTNLHNYMMFEVLETSWHTLIKSIRSATDLDELIESHNAYLYTIKKNAFLMDESRPMLLQLKLIFDTIITFCKLLDSLY--ATASRDAQVLEQREKNRQ---GDWGMSVHDPIPSSVFNPASSFVIQMNTIANDYSVHLLALLDILKSQSIGSENLPFLTFRLDFNEYYARKR 1075          
BLAST of mRNA_S-dermatodea_contig12463.1528.1 vs. uniprot
Match: A0A3R7JQA7_9STRA (Spindle pole body component n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JQA7_9STRA)

HSP 1 Score: 114 bits (284), Expect = 8.380e-24
Identity = 71/204 (34.80%), Postives = 114/204 (55.88%), Query Frame = 2
Query:    2 LERTLPELQGALHRCSLIRGQMFFLTTNLSNFVMFEVLETSWGTLQERLDSALTLDDIIEAHHTYLSDIMGRAMLHPDSKDVSDKLEEVLSIIIEFCSHQETLVIRAMAEVTTQRAEQNEKERRTARGQWGT-EAESAGGSRRLGKDQFGMSS-----IEDTARRYEEKLSDLVRLLEEKSGKT-EILRFLTFRLDFNDYYKER 592
            ++  LP +   LH+C L+R +M   TTNL N++MFEVLET+W  L + L++A  LD +IE+H  Y+S I     +  +S+++   L+ + + II+FC  QE L   A+ EV  +   Q   ER+   G WG  E E  G   + G   FG  S     +E+ A  + ++   L+ +++E S ++ + L FL  R DFN+YY ++
Sbjct:  314 VQGRLPGIGAVLHKCQLLRSEMIHFTTNLLNYMMFEVLETAWHKLVKDLNAAKDLDGLIESHAAYISSIKKNGFMMKESRELLKHLKLIFATIIKFCKAQENLYTTALKEVHEENMRQQMIERQELEGTWGIPEDEEYGAHSQRGA--FGAHSKIVRQLEEIAHDFNDQFLGLLDIVKETSNRSSQSLPFLMSRFDFNEYYHQK 515          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12463.1528.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6W1_ECTSI2.650e-8173.96Spindle pole body component n=2 Tax=Ectocarpus Tax... [more]
A0A7S2MB43_9STRA1.870e-2939.49Spindle pole body component n=2 Tax=Dictyocha spec... [more]
A0A067C8N6_SAPPC1.110e-2738.19Spindle pole body component n=2 Tax=Saprolegnia Ta... [more]
A0A835YR49_9STRA1.140e-2737.66Spindle pole body component n=1 Tax=Tribonema minu... [more]
A0A1V9YEE9_9STRA1.860e-2637.06Spindle pole body component n=1 Tax=Achlya hypogyn... [more]
K3WEA1_GLOUD1.280e-2534.98Spindle pole body component n=1 Tax=Globisporangiu... [more]
A0A8K1FH84_PYTOL1.340e-2434.33Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S3H0B4_9STRA3.230e-2434.27Spindle pole body component n=1 Tax=Spumella elong... [more]
A0A1W0A3C8_9STRA3.800e-2438.38Gamma-tubulin complex component n=1 Tax=Thraustoth... [more]
A0A3R7JQA7_9STRA8.380e-2434.80Spindle pole body component n=3 Tax=Phytophthora k... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12463contigS-dermatodea_contig12463:1680..4972 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
GOsGO:0000003,GO:0000212,GO:0000226,GO:0000278,GO:0000280,GO:0000922,GO:0000923,GO:0000928,GO:0000930,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005813,GO:0005814,GO:0005815,GO:0005816,GO:0005819,GO:0005822,GO:0005824,GO:0005825,GO:0005827,GO:0005829,GO:0005856,GO:0005874,GO:0005875,GO:0005876,GO:0005881,GO:0005886,GO:0005938,GO:0006996,GO:0007010,GO:0007017,GO:0007020,GO:0007049,GO:0007051,GO:0007052,GO:0007098,GO:0007140,GO:0007163,GO:0007276,GO:0007338,GO:0008017,GO:0008092,GO:0008150,GO:0008275,GO:0008360,GO:0009566,GO:0009605,GO:0009607,GO:0009624,GO:0009898,GO:0009987,GO:0010638,GO:0010968,GO:0012505,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0030863,GO:0030981,GO:0031023,GO:0031109,GO:0031110,GO:0031112,GO:0031113,GO:0031116,GO:0031122,GO:0031334,GO:0031967,GO:0031975,GO:0032153,GO:0032155,GO:0032271,GO:0032273,GO:0032501,GO:0032504,GO:0032886,GO:0032991,GO:0033043,GO:0034622,GO:0043015,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043254,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044450,GO:0044459,GO:0044464,GO:0044703,GO:0044732,GO:0046785,GO:0048232,GO:0048285,GO:0048518,GO:0048522,GO:0048609,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051225,GO:0051258,GO:0051298,GO:0051321,GO:0051415,GO:0051418,GO:0051493,GO:0051495,GO:0051704,GO:0051707,GO:0055028,GO:0061496,GO:0061497,GO:0065003,GO:0065007,GO:0065008,GO:0070507,GO:0070925,GO:0071840,GO:0071944,GO:0071957,GO:0071963,GO:0090063,GO:0090307,GO:0097435,GO:0098552,GO:0098562,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0099568,GO:0140013,GO:0140014,GO:1902850,GO:1902903,GO:1902905,GO:1903046,GO:1903047
EggNOG free text desc.microtubule nucleation by interphase microtubule organizing center
EggNOG OGsKOG2000@1,KOG2000@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko04147,ko04812
Hectar predicted targeting categoryother localisation
Taxonomic scopeEukaryota
Seed ortholog score240.7
Seed ortholog evalue5.8e-61
Seed eggNOG ortholog2880.D7G6W1
Preferred nameTUBGCP3
KEGG koko:K16570
Exons6
Model size1272
Cds size609
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12463.1528.1prot_S-dermatodea_contig12463.1528.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig12463 1744..4373 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924248.602751-UTR-S-dermatodea_contig12463:1679..17431622924248.602751-UTR-S-dermatodea_contig12463:1679..1743Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12463 1680..1743 +
1694079123.6430397-UTR-S-dermatodea_contig12463:1679..17431694079123.6430397-UTR-S-dermatodea_contig12463:1679..1743Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12463 1680..1743 +
1622924248.684381-UTR-S-dermatodea_contig12463:4373..49721622924248.684381-UTR-S-dermatodea_contig12463:4373..4972Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12463 4374..4972 +
1694079123.7232552-UTR-S-dermatodea_contig12463:4373..49721694079123.7232552-UTR-S-dermatodea_contig12463:4373..4972Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12463 4374..4972 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924248.6161983-CDS-S-dermatodea_contig12463:1743..17691622924248.6161983-CDS-S-dermatodea_contig12463:1743..1769Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12463 1744..1769 +
1694079123.6544504-CDS-S-dermatodea_contig12463:1743..17691694079123.6544504-CDS-S-dermatodea_contig12463:1743..1769Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12463 1744..1769 +
1622924248.6267135-CDS-S-dermatodea_contig12463:2210..23851622924248.6267135-CDS-S-dermatodea_contig12463:2210..2385Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12463 2211..2385 +
1694079123.6632884-CDS-S-dermatodea_contig12463:2210..23851694079123.6632884-CDS-S-dermatodea_contig12463:2210..2385Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12463 2211..2385 +
1622924248.6385856-CDS-S-dermatodea_contig12463:2827..29071622924248.6385856-CDS-S-dermatodea_contig12463:2827..2907Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12463 2828..2907 +
1694079123.6716824-CDS-S-dermatodea_contig12463:2827..29071694079123.6716824-CDS-S-dermatodea_contig12463:2827..2907Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12463 2828..2907 +
1622924248.6504786-CDS-S-dermatodea_contig12463:3274..34131622924248.6504786-CDS-S-dermatodea_contig12463:3274..3413Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12463 3275..3413 +
1694079123.6810422-CDS-S-dermatodea_contig12463:3274..34131694079123.6810422-CDS-S-dermatodea_contig12463:3274..3413Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12463 3275..3413 +
1622924248.6620193-CDS-S-dermatodea_contig12463:3713..38051622924248.6620193-CDS-S-dermatodea_contig12463:3713..3805Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12463 3714..3805 +
1694079123.6933637-CDS-S-dermatodea_contig12463:3713..38051694079123.6933637-CDS-S-dermatodea_contig12463:3713..3805Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12463 3714..3805 +
1622924248.6739397-CDS-S-dermatodea_contig12463:4276..43731622924248.6739397-CDS-S-dermatodea_contig12463:4276..4373Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12463 4277..4373 +
1694079123.7127216-CDS-S-dermatodea_contig12463:4276..43731694079123.7127216-CDS-S-dermatodea_contig12463:4276..4373Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12463 4277..4373 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig12463.1528.1

>prot_S-dermatodea_contig12463.1528.1 ID=prot_S-dermatodea_contig12463.1528.1|Name=mRNA_S-dermatodea_contig12463.1528.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=203bp
MFFLTTNLSNFVMFEVLETSWGTLQERLDSALTLDDIIEAHHTYLSDIMG
RAMLHPDSKDVSDKLEEVLSIIIEFCSHQETLVIRAMAEVTTQRAEQNEK
ERRTARGQWGTEAESAGGSRRLGKDQFGMSSIEDTARRYEEKLSDLVRLL
EEKSGKTEILRFLTFRLDFNDYYKERRAALMLPPPPRHGAVQGSVSSSRR
PR*
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mRNA from alignment at S-dermatodea_contig12463:1680..4972+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig12463.1528.1 ID=mRNA_S-dermatodea_contig12463.1528.1|Name=mRNA_S-dermatodea_contig12463.1528.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3293bp|location=Sequence derived from alignment at S-dermatodea_contig12463:1680..4972+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GCTTGAGCGGACTCTTCCAGAGCTGCAGGGGGCGCTGCACCGCTGCAGCC TGATTCGCGGGCAGATGTTCTTCCTCACAACCAACCTCAGGTTAGGGCGT GTTTTCAGGACCTCGCCACCAAATACCAAATACCGCTTTTTTGTGCCTTC GAAGCTGCTGATTGGATAAACTACATACTGTAGGCGGGGGGTGTCCCTAC GGTGCACACCCTGTGACACACGACAAGTACTTGCAGGTTTCAATTTGATG AAAAATATCACTGCCGTTGCTATTCGCGTGCGAAACGCTCGGGTGCGTCG TGTCGGTGTTGCCGCTGTGAAATCTACACAACGCTGGTCCAACGGTACGT CCAGCGTAGCTGAAAACGCAACAAACTTTGTGTAAAGCCCCTTTTTGCGA GTCGTTCGGAAAGCGGCGACCTCAGTCCGCATCGTTATCGCAAATTAACG GCCTCGCCCCGTTCTCATGAGGGTATCGTCCTCACACACCCCCGTGGTGC GCCTCGCCTTGCTTCCTCGGCCGCCTTGCAGCAACTTCGTGATGTTCGAG GTGCTGGAAACGTCGTGGGGAACCCTGCAGGAGAGGCTCGACTCTGCCCT CACACTCGACGATATCATCGAGGCGCACCACACGTACCTGTCAGACATCA TGGGCAGAGCGATGCTACACCCGGATAGCAAGGACGTCAGCGACAAGCTC GAAGAGGTGCGGGCGTGATTCGATGTATTTTTGCGGGAGCTCGGGCTACG CGAACGCTGCGAATGGTAACGTCGACCGCGCAATTTGTTGAGGAAAAAGC AGATACCATCGGGACAGGACAGGAGCTCGCTTCTGTTGCTGGGTTCGATG CGTTCCAATGTTGTTGTACAGGCGTTGTAGATGCGAGGGATTCAAACCCC TTTCGTCACCTTCATATCCTATCATTGTAAGCCCATACTTGGGCATGATT CGGCATGATGTCGACCCACGCCCTTGGTTTTCTTGGAGTTTGAAAGCTCC TCTTCAATCAAGCTATAAGGCGTGATTGAGGATCGGTGTCCCACCCTGGT AAGGCGTATGGTCTGTTCGCTTCATCGAGCCGCTGGACGCCATCAATTTC GGATTGGTGATTAAGCATGTAGCCTTTTGATCCCCCCTCACGTCACAGGT GCTTTCTATCATCATCGAGTTCTGCAGCCACCAGGAGACCCTCGTCATCC GAGCCATGGCAGAGGTTACCACCCAGAGGTAGCTGCCGTGTGAAATATGT CTTGCCAGGAATCCCGTTGCATCGTAGGAGCCTTCTGTTTCTTACGTCGT TCGCACTATACATACTATATATGAACTGTCCCTCTATTATTTTCGTTTCT GTTCAACACTCCCCATCAAGGTATGTTCCCACGTGCGCAGTATACACCTG TAGCACTTTGTGTTATCGCGCGCTATCCACCGCATTATTGCGGCACCTGA TTAGTGCACGTACCACCCACCTGTTAAATCGCTCCGTGCCGGGCACGCTG CTCACTTAACTCTCTCGTCGTGCCCTGCCGCTACCCACACACCATACCAT GCAAAATGGATGGTTGCATTGTGCGCCGCCTGCGCTTTTCCGTAGGGCCG AGCAAAATGAGAAGGAGCGCCGGACGGCCCGAGGTCAGTGGGGGACGGAG GCAGAGTCGGCAGGCGGAAGCCGAAGATTGGGGAAGGATCAATTCGGCAT GAGCAGCATCGAGGACACCGCGCGACGATACGAGGCAAGAGAACCCCGGC GGGCGGCCAGTCTGGTGGCGCTTTGAACATGTGATGCGTAGTGGGGGTCT TCGCCCGCACGAGAAACGAAACGAAGTAGCTGTAGCATCAGCAAGTGCTG TGGGGCTGATAGATGATGCGAGAATCGAAGCGGAGTAGCAGTAACACCAA CACTTGCAGTGGCGCTACTGTACGTGGAGAATTAACCGGCGCAGGCGTTG GATTTTTTTTGGTCACTCGTGGTAACTCGTGAAACGTCTTGTGTTTTTTC TCGCCGTGATCTCTGTGTATGCCCGTCTTTGCAGGAGAAGCTCTCGGATC TGGTGCGCTTGTTGGAAGAAAAGAGCGGCAAGACCGAGATACTTCGATTC CTCACCTTCCGATTGGACTTCAACGAGTGAGAGACAAGGGCACACATACA TAACAAACTCCAGCCATTATACCAAATAACAGCGCCGATGTGACATACGT ATATGGCGATAGTTCAACCTCTGGAGCGAAAAATAACCGCCGTCTATCGG TCGTTTCATTCACATGCGTTTATTTTCCGTTCGTATTTATTTGTAAGCGA TTTTTCTACCATGTTAACTCCCACACATGCCCAGCCGGTTTGCCGTCTCA AGACGTTAGTCTTGTAGACCACAGTAGGTTCCGTCGGCCAGCGCAGATCA TTGCGGGAATCGTCTCAACCGTTATGCAGCACTCAACCAGCGCACCACCC ATTCTACGCTAATCGTGGTATCCTACGTGTGCCATGTGCCGAAATATCGT TGTCGCATATCGACCGTGATTACCACGACCACTGGCCTCCGCTATCGACT GAGCCATCCCCTACCGCTTGCTTCTCAATTGCCACCTCAACTCACAGCTA CTACAAGGAGCGCAGAGCAGCACTCATGTTGCCACCTCCACCTCGCCACG GGGCGGTCCAAGGCAGCGTCTCGTCCTCGAGGCGCCCCCGATAGCGGCCT ACTGGTTTACACACGGCAGCGGGTGCCGGCTGCTATCGCTTTTTGCTTAA CGTAGGAGGAAGGGTTGTATATTTGGGTAGGCCGACCGTGGACGTGAGAG ACGGAATATACAAGTGACGGGGAGGAGCACAAGCTCCTGTAGATGGGTGG CGAGTCCTGTTGTCTTCGCTCTAGCACCTTGGTTGAACGTGAGGGACGTC GCCCGTGGTGCCGTATAGATTATTGGGCGGGGTTTCGGTGGCCGCGAAGA GCAAAAGAGGGTAGCACCGGTATATAACACCAACATAGGATAGTTGTGCA TTGGTTTACCACCCCCTTAGAGTTTGGGACCAACGCGTTTGATTCTGCCA CCGGGGGCGTCAATATGTTGATAAAAATTATGAGCTTTTGGTTTGTCGGA TTCACGCCCACGAGCGCGAGGATGGGCGGGGCCCACCGTGTTGATCCATC TCAGAAATCACGACCTAGCTAGGAATCATCTGAGGATATTGTTTTTGCCG CGCCCACGGAGTTGAATACCTTCACAACTTGTCTGCAGTGGTCGCCTTGT AAGCCCTGTCCGTAAAATACCCTGGAGCGAAGGTCTTCGTTGC
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Coding sequence (CDS) from alignment at S-dermatodea_contig12463:1680..4972+

>mRNA_S-dermatodea_contig12463.1528.1 ID=mRNA_S-dermatodea_contig12463.1528.1|Name=mRNA_S-dermatodea_contig12463.1528.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1218bp|location=Sequence derived from alignment at S-dermatodea_contig12463:1680..4972+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGTTCTTCCTCACAACCAACCTCAGATGTTCTTCCTCACAACCAACCTC
AGCAACTTCGTGATGTTCGAGGTGCTGGAAACGTCGTGGGGAACCCTGCA
GGAGAGGCTCGACTCTGCCCTCACACTCGACGATATCATCGAGGCGCACC
ACACGTACCTGTCAGACATCATGGGCAGAGCGATGCTACACCCGGATAGC
AAGGACGTCAGCGACAAGCTCGAAGAGCAACTTCGTGATGTTCGAGGTGC
TGGAAACGTCGTGGGGAACCCTGCAGGAGAGGCTCGACTCTGCCCTCACA
CTCGACGATATCATCGAGGCGCACCACACGTACCTGTCAGACATCATGGG
CAGAGCGATGCTACACCCGGATAGCAAGGACGTCAGCGACAAGCTCGAAG
AGGTGCTTTCTATCATCATCGAGTTCTGCAGCCACCAGGAGACCCTCGTC
ATCCGAGCCATGGCAGAGGTTACCACCCAGAGGTGCTTTCTATCATCATC
GAGTTCTGCAGCCACCAGGAGACCCTCGTCATCCGAGCCATGGCAGAGGT
TACCACCCAGAGGGCCGAGCAAAATGAGAAGGAGCGCCGGACGGCCCGAG
GTCAGTGGGGGACGGAGGCAGAGTCGGCAGGCGGAAGCCGAAGATTGGGG
AAGGATCAATTCGGCATGAGCAGCATCGAGGACACCGCGCGACGATACGA
GGGCCGAGCAAAATGAGAAGGAGCGCCGGACGGCCCGAGGTCAGTGGGGG
ACGGAGGCAGAGTCGGCAGGCGGAAGCCGAAGATTGGGGAAGGATCAATT
CGGCATGAGCAGCATCGAGGACACCGCGCGACGATACGAGGAGAAGCTCT
CGGATCTGGTGCGCTTGTTGGAAGAAAAGAGCGGCAAGACCGAGATACTT
CGATTCCTCACCTTCCGATTGGACTTCAACGAGAGAAGCTCTCGGATCTG
GTGCGCTTGTTGGAAGAAAAGAGCGGCAAGACCGAGATACTTCGATTCCT
CACCTTCCGATTGGACTTCAACGACTACTACAAGGAGCGCAGAGCAGCAC
TCATGTTGCCACCTCCACCTCGCCACGGGGCGGTCCAAGGCAGCGTCTCG
TCCTCGAGGCGCCCCCGATAGCTACTACAAGGAGCGCAGAGCAGCACTCA
TGTTGCCACCTCCACCTCGCCACGGGGCGGTCCAAGGCAGCGTCTCGTCC
TCGAGGCGCCCCCGATAG
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