mRNA_S-dermatodea_contig12441.1521.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig12441.1521.1 vs. uniprot
Match: D7G6E4_ECTSI (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6E4_ECTSI) HSP 1 Score: 246 bits (627), Expect = 3.320e-80 Identity = 119/161 (73.91%), Postives = 139/161 (86.34%), Query Frame = 1
Query: 13 KQAQTLKQTILDTALGTSNGLEATSEQRDVISKAVNGLVGLNPTEDIATSELATGMWNLVYTTTPGASGGKLGPFIGEVQQEVDIARDLYVNYVRVGPLTGKLVATWEVANAQQWKVIFKTIAFSLWGTQLVERELGQEGLWTLTYLDNDMRILTARSLER 495
++ + LKQTIL+ A GTSNGL+AT +QRD ISKA+NGL NPT+DI TSELATG W+L+YTTTPGASGGKLGPFIGEVQQEVDIA LYVNYVR+GPLTG+L ATW+V N QWKV+FK+IAF L+G QLV+ EL Q GLWTL+YLD+DMR+LTARSLER
Sbjct: 57 EEVRALKQTILEEAAGTSNGLKATPQQRDAISKAINGLAAANPTKDITTSELATGTWDLIYTTTPGASGGKLGPFIGEVQQEVDIAEGLYVNYVRLGPLTGRLEATWDVVNKSQWKVVFKSIAFLLFGQQLVKNELDQAGLWTLSYLDDDMRVLTARSLER 217
BLAST of mRNA_S-dermatodea_contig12441.1521.1 vs. uniprot
Match: K8Z6W7_NANGC (PAP_fibrillin domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z6W7_NANGC) HSP 1 Score: 147 bits (371), Expect = 2.980e-41 Identity = 78/158 (49.37%), Postives = 104/158 (65.82%), Query Frame = 1
Query: 28 LKQTILDTALGTSNGLEATSEQRDVISKAVNGLVGLNPTEDIATSELATGMWNLVYTTTPGASGGKLGPFIGEVQQEVDIARDLYVNYVRV--GPLTGKLVATWEVANAQQWKVIFKTIAFSLWGTQLVERE--LGQEGLWTLTYLDNDMRILTARSL 489
LKQ + A NGL+AT + I + L+ NPT++IATS+ G W LVYT+T G S GKLGPF+G+V Q++D A YVN+VR+ G + G LVATWEV A +WKVIF+ I F ++G LV+++ GQ G W LTY+D D+RILTA +L
Sbjct: 66 LKQDLYAVAKNKDNGLKATESDKAKILSLASELIKRNPTKNIATSDKVDGTWRLVYTSTSGGSAGKLGPFVGQVLQKIDTAGGDYVNFVRLFGGLVEGALVATWEVKGANEWKVIFQDITFRVFGIPLVDKKPLSGQAGQWKLTYVDEDLRILTAAAL 223
BLAST of mRNA_S-dermatodea_contig12441.1521.1 vs. uniprot
Match: A0A7S2IJB9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IJB9_9STRA) HSP 1 Score: 140 bits (354), Expect = 7.570e-39 Identity = 75/161 (46.58%), Postives = 105/161 (65.22%), Query Frame = 1
Query: 10 AKQAQTLKQTILDTALGTSNGLEATSEQRDVISKAVNGLVGLNPTEDIATSELATGMWNLVYTTTPGASGGKLGPFIGEVQQEVDIARDL--YVNYVRVGP--LTGKLVATWEVANAQQWKVIFKTIAFSLWGTQLVERELGQEGLWTLTYLDNDMRILTA 480
A++ TLK TI A GTSNG++A+ RD I+ LV +NPT+ A SE G W LVYTT PG+S GKLGPF G+V+Q + I + YVNYVR+G + G L A+W+V + ++W V F+T+ F + G +++E++L EG W + YLD+D RIL A
Sbjct: 55 AEETATLKDTIRQLARGTSNGIDASKSVRDEIATLSKQLVKMNPTKSPALSEKLDGSWALVYTTNPGSSAGKLGPFTGDVEQAIRITGENPEYVNYVRLGGGLVEGMLSASWDVLSKKEWLVKFETLQFRILGIKILEKDLKAEGTWKMEYLDDDFRILYA 215
BLAST of mRNA_S-dermatodea_contig12441.1521.1 vs. uniprot
Match: A0A0G4E8H9_VITBC (PAP_fibrillin domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4E8H9_VITBC) HSP 1 Score: 140 bits (354), Expect = 1.200e-38 Identity = 70/159 (44.03%), Postives = 100/159 (62.89%), Query Frame = 1
Query: 7 PAKQAQTLKQTILDTALGTSNGLEATSEQRDVISKAVNGLVGLNPTEDIATSELATGMWNLVYTTTPGASGGKLGPFIGEVQQEVDIARDLYVNYVRVGPLTGKLVATWEVANAQQWKVIFKTIAFSLWGTQLVERELGQEGLWTLTYLDNDMRILTAR 483
P+ A +LK+ I A G NG++ T +R+ I V L +P + A S+ G+W LVYTTTPG+S GKLGPF+G+V Q +D+ D+Y+NYV +GP+ L A+W+V +W+V F+ I F ++G L + EL G W +TYLD+D RIL AR
Sbjct: 65 PSVDAASLKREIGRIAKGKDNGIKVTPAEREKILSLVKQLESSSPIKAAAQSKRLNGLWRLVYTTTPGSSAGKLGPFVGDVTQMIDMDSDVYINYVDIGPVQAFLEASWDVLGPNRWRVKFQNIGFRVFGIPLAKNELKNVGDWRMTYLDDDYRILWAR 223
BLAST of mRNA_S-dermatodea_contig12441.1521.1 vs. uniprot
Match: A0A7S4NCX2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NCX2_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.300e-38 Identity = 75/157 (47.77%), Postives = 97/157 (61.78%), Query Frame = 1
Query: 28 LKQTILDTALGTSNGLEATSEQRDVISKAVNGLVGLNPTEDIATSELATGMWNLVYTTTPGASGGKLGPFIGEVQQEVDIA----RDLYVNYVRVG--PLTGKLVATWEVANAQQWKVIFKTIAFSLWGTQLVERELGQEGLWTLTYLDNDMRILTA 480
+K I D A GTSNG A+ E RD I+ + L G NPT D++TS G W L Y+T G S GKLGPF+GEV+Q + I Y+NYVR+G + G L ATW+V +W+V F ++ F + G LVE+ELG EG+W +TYLD D RIL A
Sbjct: 103 IKSEIKDLAAGTSNGCTASEEVRDGIAALASELEGANPTPDLSTSPRMDGSWKLTYSTNGGTSAGKLGPFVGEVEQLIRIEGREDSPDYINYVRLGGGAVEGALTATWDVLAEDKWRVKFGSVTFRVLGVPLVEKELGAEGIWRMTYLDEDFRILYA 259
BLAST of mRNA_S-dermatodea_contig12441.1521.1 vs. uniprot
Match: A0A8J6CA72_DIALT (PAP_fibrillin domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CA72_DIALT) HSP 1 Score: 131 bits (330), Expect = 1.610e-35 Identity = 73/161 (45.34%), Postives = 96/161 (59.63%), Query Frame = 1
Query: 19 AQTLKQTILDTALGTSNGLEATSEQRDVISKAVNGLVGLNPTEDIATSELATGMWNLVYTTTPGASGGKLGPFIGEVQQEVDIARDLYVNYVRVGP-----LTGKLVATWEVANAQQWKVIFKTIAFSLWGTQLV-ERELGQEGLWTLTYLDNDMRILTAR 483
A+ LK +I+ A GT NGL A I L LNPT +ATSEL G W LVYT+T G S GK+GPF+G V+Q D+ + Y N+V +GP +TG+L ATW+V W+V FK+I+F L G +V ++ L Q G W L Y D+D RIL A+
Sbjct: 24 ARPLKSSIVRLAAGTQNGLTADVSTAAQIQALAKLLEELNPTAHLATSELVDGQWQLVYTSTSGGSAGKIGPFVGRVEQHFDLRQGRYKNFVHLGPQAIDLVTGELQATWDVLGDALWRVNFKSISFFLLGLPIVKDKPLSQCGTWRLVYTDDDFRILWAQ 184
BLAST of mRNA_S-dermatodea_contig12441.1521.1 vs. uniprot
Match: A0A7S2XW95_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW95_9STRA) HSP 1 Score: 130 bits (328), Expect = 8.160e-35 Identity = 64/149 (42.95%), Postives = 96/149 (64.43%), Query Frame = 1
Query: 40 ILDTALGTSNGLEATSEQRDVISKAVNGLVGLNPTEDIATSELATGMWNLVYTTTPGASGGKLGPFIGEVQQEVDIARDLYVNYVRVGPLTGKLVATWEVANAQQWKVIFKTIAFSLWGTQLVEREL--GQEGLWTLTYLDNDMRILTA 480
I+ A GTSNG++A++E ++ I+ L LN +D+ +S+L G W+L+YTT G S GKLGPF+GEV+Q +D+ D YVN V VG + L+ATW N + W VIFK + F L+G ++ ++ G W +T++D++MRIL A
Sbjct: 68 IVQLAQGTSNGVKASTEIKEKIAGLAERLENLNQAKDMTSSQLLQGEWDLIYTTNQGNSAGKLGPFVGEVKQIIDLQEDRYVNMVTVGIIEAVLMATWITRNNRNWTVIFKDVTFKLFGIPVISKKFPDSARGDWEMTFMDDNMRILYA 216
BLAST of mRNA_S-dermatodea_contig12441.1521.1 vs. uniprot
Match: A0A7S4DWF7_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DWF7_9EUKA) HSP 1 Score: 129 bits (324), Expect = 4.070e-34 Identity = 68/164 (41.46%), Postives = 101/164 (61.59%), Query Frame = 1
Query: 1 MQPAKQA--QTLKQTILDTALGTSNGLEATSEQRDVISKAVNGLVGLNPTEDIATSELATGMWNLVYTTTPGASGGKLGPFIGEVQQEVDIARDLYVNYVRV--GPLTGKLVATWEVANAQQWKVIFKTIAFSLWGTQLVERELGQEGLWTLTYLDNDMRILTA 480
+QP A ++LK I + + GT+NG++A+ +R+ I++ + L NPT + +S L +G W L+YTT G+S GK+GPF+G+V Q V++ YVN V + G G L ATW+ + + WKV FK I L+G L E+EL G W +TYLD+D R+L A
Sbjct: 69 LQPKSSADVESLKTAIREKSKGTNNGVDASPARREEIAELLQELEAANPTRKLTSSPLISGSWKLLYTTNDGSSAGKIGPFVGDVVQNVELQDGEYVNIVSLANGAFRGVLTATWDNVSDKLWKVKFKDIKLELFGVVLQEKELPATGTWRMTYLDDDFRVLYA 232
BLAST of mRNA_S-dermatodea_contig12441.1521.1 vs. uniprot
Match: A0A7S4CQT7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CQT7_9EUGL) HSP 1 Score: 127 bits (318), Expect = 2.950e-32 Identity = 70/155 (45.16%), Postives = 96/155 (61.94%), Query Frame = 1
Query: 22 QTLKQTILDTALGTSNGLEATSEQRDVISKAVNGLVGLNPTEDIATSELATGMWNLVYTTTPGASGGKLGPFIGEVQQEVDIARDLYVNYVRVGP--LTGKLVATWEVANAQQWKVIFKTIAFSLWGTQLVERELGQEGLWTLTYLDNDMRILTA 480
++LK+ I A GTSNG A+ + + AV+ L LNP +IATSE TG W L+YTT G S GKLGPF+G+V Q V + Y N VR+GP + L A W+V +W+V F+ I FSL+G + E+E+ G+W +TYLD+ MR+L A
Sbjct: 180 ESLKKEIFRLAEGTSNGTSASEDTKAAFLDAVSKLEKLNPEPEIATSEGMTGNWKLLYTTNTGNSAGKLGPFVGDVFQNVVYSSGKYENIVRLGPGIVEACLGADWDVLGPCKWQVNFRYIRFSLFGNVVSEKEVSNCGVWRMTYLDDSMRVLWA 334
BLAST of mRNA_S-dermatodea_contig12441.1521.1 vs. uniprot
Match: A0A7S1IL70_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IL70_9EUGL) HSP 1 Score: 114 bits (284), Expect = 3.700e-29 Identity = 63/140 (45.00%), Postives = 83/140 (59.29%), Query Frame = 1
Query: 67 NGLEATSEQRDVISKAVNGLVGLNPTEDIATSELATGMWNLVYTTTPGASGGKLGPFIGEVQQEVDIARDLYVNYVRVGP--LTGKLVATWEVANAQQWKVIFKTIAFSLWGTQLVERELGQEGLWTLTYLDNDMRILTA 480
NG A + I+ V L LNP +IATS TG W LVYT+ G+S GKLGPF+G+V Q V Y N VR+G + L A W+V +W+V F+T+ FSL+G L E+EL G+W +TYLD+ MR+L A
Sbjct: 2 NGTAADEATKAAIADLVAKLEALNPEANIATSTGMTGDWKLVYTSNQGSSAGKLGPFVGDVFQNVRYENGKYENVVRLGGGIVEAVLGADWDVLEPCKWQVNFRTLKFSLFGATLKEQELKAVGVWRMTYLDDSMRVLWA 141 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12441.1521.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig12441.1521.1 >prot_S-dermatodea_contig12441.1521.1 ID=prot_S-dermatodea_contig12441.1521.1|Name=mRNA_S-dermatodea_contig12441.1521.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=165bp MQPAKQAQTLKQTILDTALGTSNGLEATSEQRDVISKAVNGLVGLNPTEDback to top mRNA from alignment at S-dermatodea_contig12441:2566..4034+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig12441.1521.1 ID=mRNA_S-dermatodea_contig12441.1521.1|Name=mRNA_S-dermatodea_contig12441.1521.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1469bp|location=Sequence derived from alignment at S-dermatodea_contig12441:2566..4034+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig12441:2566..4034+ >mRNA_S-dermatodea_contig12441.1521.1 ID=mRNA_S-dermatodea_contig12441.1521.1|Name=mRNA_S-dermatodea_contig12441.1521.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=990bp|location=Sequence derived from alignment at S-dermatodea_contig12441:2566..4034+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |