mRNA_S-dermatodea_contig1239.1495.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig1239.1495.1
Unique NamemRNA_S-dermatodea_contig1239.1495.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig1239.1495.1 vs. uniprot
Match: D7FRP4_ECTSI (Similar to Iron-containing Alcohol Dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRP4_ECTSI)

HSP 1 Score: 474 bits (1219), Expect = 3.460e-157
Identity = 328/636 (51.57%), Postives = 379/636 (59.59%), Query Frame = 1
Query:   97 DLESLDNPAKDTNYGDDGSLQYGVS----NAAAGPSDQFFSADTRVVFGVNALEIGLVELFDMGLKRALIVTGWNQARADPIVWELLPRGFELAWHSVSTEPSLTDVAKGVSLALDHRADCVLAMGGGAVIDAAKAIAAIAYADKDPNKAAKRLLAAASQPRCATCWDTVPDAGA---AEDDDLAPLLGPIPLVAIPIIAGVGAEVTPMATILDDDDPLEPEKVTVGFHNSAAAMPAPFMAIVEPRLMMRVPLETTWSRAFVALAGCIEGYVAGRGFVPDLLSHQGIERVSRCLSRELGFRGPLYEEREDIAFAGVIRGLVASRNEWSFLHQLASAVAVASGAPYAECVSRLFPRVLEAQISGLRREEAAFADPSPRRRQLPRSPENASRTDATNDGSTASSGEDFVGSDPEVVSQEEENDGWEAEGAGDAVLPAVAAGSRSXXXXXXXXXXXXXXXXDRYG-RACAALLKYRRVAGFV----------TGDRKGSV-------PEAIIGWLDARLLDKNVASLYRAGLRPEHAVSVVEALL---------REGAGRAVDGEGATFGGLGEDMVMAIVLGEAAPRKDDDGTSDAAGE------GAVQDSAAVEELSVAAPAGPT-----QTGPWQN 1869
            DLESL NPAK+ +YGD+ +LQYGV+     A AG +  FFSADTRVVFGVNALEIGLVEL+D+GL+RA+IVTGWNQARADP+VWELLPRGF+L WHSVS+EPSL+DVA+G  LAL+HRADCV+AMGG AVIDA KAIAAIAYADKD  KAA RLLAAAS+PR  T  +   +AG    AE   LAPLLGP+PLVAIP++AG+G+EVTP+ATI+DD DPLEP KVTVGFH+SAAAMPAPFMAIVEPRLMMRVPLE TW  AFVALAGC+E YVAGRGFVPDL+                         R         RG+  S +  +   +                 SRL       QI+ LRR+E A+ DP+  RR   R      +T A  D    + G D  G D                       P+   GS  XXXXXXXXXX      D Y  RACA LLKY+RVAGFV          TG R+          PE I+ WLD RLLDKNVA LYR  LRPEH   V+E LL         R+G  +A       FGGLGE  V +IV GEA  R   D  S + GE      G   ++AAV         GP      QTGPWQ 
Sbjct:   51 DLESLANPAKEKDYGDNSALQYGVTVGAEAAGAGAAHHFFSADTRVVFGVNALEIGLVELYDLGLQRAMIVTGWNQARADPVVWELLPRGFDLKWHSVSSEPSLSDVAEGAKLALEHRADCVVAMGGAAVIDAGKAIAAIAYADKDSAKAAGRLLAAASEPRETTAPEHGGEAGVGAEAEATGLAPLLGPVPLVAIPLVAGIGSEVTPVATIMDDHDPLEPVKVTVGFHDSAAAMPAPFMAIVEPRLMMRVPLEITWPGAFVALAGCLESYVAGRGFVPDLM-------------------------RASSGCPDACRGIWVSADRCTKNGK----------------TSRL-------QIAELRRQEDAYMDPAYHRRNRARR-----QTAAGADNPDRTGGGDDAGGDS-------------------GTRPSANDGSXXXXXXXXXXXXREKVYSDDYNDRACAVLLKYQRVAGFVLGAGEQDSSDTGRRRAGTNPGAAPSPEDIVEWLDERLLDKNVAPLYRTSLRPEHVQPVLETLLSGXXXXXXXRDGGEKAAL---LAFGGLGEAAVRSIVAGEAGRR---DAGSSSGGEREKEVKGLSAEAAAVVSSMSGDGEGPLGREAPQTGPWQK 608          
BLAST of mRNA_S-dermatodea_contig1239.1495.1 vs. uniprot
Match: A0A6H5JQN5_9PHAE (Fe-ADH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN5_9PHAE)

HSP 1 Score: 398 bits (1023), Expect = 9.660e-130
Identity = 281/511 (54.99%), Postives = 314/511 (61.45%), Query Frame = 1
Query:  457 MGGGAVIDAAKAIAAIAYADKDPNKAAKRLLAAASQPRCATCWDTVPDAGA---AEDDDLAPLLGPIPLVAIPIIAGVGAEVTPMATILDDDDPLEPEKVTVGFHNSAAAMPAPFMAIVEPRLMMRVPLETTWSRAFVALAGCIEGYVAGRGFVPDLL----SHQGIERVSRCLSRELGFRGPLYEEREDIAFAGVIRGLVASRNEWSFLHQLASAVAVASGAPYAECVSRLFPRVLEAQISGLRREEAAFADPSPRRRQLPRSPENASRTDATNDGSTASSGEDFVGSDPEVVSQEEENDGWEAEGAGDA-VLPAVAAGSRSXXXXXXXXXXXXXXXXDRYG-RACAALLKYRRVAGFV----------TGDRKGSV-------PEAIIGWLDARLLDKNVASLYRAGLRPEHAVSVVEALLREGA---GRAVDGEGAT---FGGLGEDMVMAIVLGEAAPR---KDDDGTSDAAGEGAVQDSAAVEELSVAAPAGPT-----QTGPWQN 1869
            MGG AVIDA KAIAAIAYADKD  KAA RLLAAAS+PR  T  +   +AG    AE   LAPLLGP+PLVAIP++AG+G+EVTP+ATILDD DPLEP KVTVGFH+SAAAMPAPFMAIVEPRLMMRVPLE TW  AFVALAGC+E YVAGRGFVPDL+    SHQGIERVSRCLSR+LGFRGPLY+EREDIAFAGV+RGLVASR EW FLHQLASAVA+A                       LRR+E A+ DP+  RR   R          T DG+           +P+ +       G   E  GD+   P+   GSRS  XXXXXXXX      D Y  RACA LLKY+RVAGFV          TG R+          PE I+ WLD RLLDKNVA LYR GLRPEH   V+E LL  G    G    GE A    FG LGE  V +IV GEA  R       G  +   EG   ++AAV         GP      QTGPWQ 
Sbjct:    1 MGGAAVIDAGKAIAAIAYADKDSAKAAGRLLAAASEPRETTAPEHGGEAGVGAEAEAAGLAPLLGPVPLVAIPLVAGIGSEVTPVATILDDRDPLEPVKVTVGFHDSAAAMPAPFMAIVEPRLMMRVPLEITWPGAFVALAGCLESYVAGRGFVPDLMRWGDSHQGIERVSRCLSRDLGFRGPLYQEREDIAFAGVVRGLVASRTEWGFLHQLASAVAIAE----------------------LRRQEDAYMDPAYHRRNRARR--------HTADGTD----------NPDRM-------GGGIEAGGDSGSRPSANDGSRSGSXXXXXXXXHEKVYSDDYNDRACAVLLKYQRVAGFVLGAGEQDGGGTGRRRAGTNPGAAPSPEDIVEWLDERLLDKNVAPLYRTGLRPEHVQPVLETLLSGGXXXDGNHDGGEKAALLAFGVLGEAAVRSIVAGEACTRDAGSSRGGEQEKQVEGVSAEAAAVVSSISGDGEGPPGREAPQTGPWQK 464          
BLAST of mRNA_S-dermatodea_contig1239.1495.1 vs. uniprot
Match: A0A0S8BNM8_9CHLR (Alcohol dehydrogenase (Fragment) n=1 Tax=Anaerolineae bacterium SG8_19 TaxID=1703386 RepID=A0A0S8BNM8_9CHLR)

HSP 1 Score: 112 bits (279), Expect = 2.860e-23
Identity = 101/329 (30.70%), Postives = 148/329 (44.98%), Query Frame = 1
Query:  202 FSADTRVVFGVNALEIGLVELFDMGL-KRALIVTGWNQARADPIVWELLPRGFELAWHSVSTEPSLTDVAKGVSLALDHRADCVLAMGGGAVIDAAKAIAAIAYADKDPNKAAKRLLAAASQPRCATCWDTVPDAGAAEDDDLAPLLGP-IPLVAIPIIAGVGAEVTPMATILDDDDPLEPEKVTVGFHNSAAAMPAPFMAIVEPRLMMRVPLETTWSRAFVALAGCIEGYVAGRGF-VPDLLSHQGIERVSRCLSRELGFRGPLYEEREDIAFAGVIRGLVASRNEWSFLHQLASAVAVASGAPYAECVSRLFPRVLEAQISGLRREE 1179
            F+  TR++FG     +G V     G  +RA +VTG NQA A P++ +L  +G E   + V+ EP+ T   +G   A    A  V+ +GGG+V+DA KAIAA+     D                    +D +   G  +     PL  P  P +AIP  AG GAEVT  A +   +      KV V   +       P +A+V+P L   +P   T S    AL   +E YV+     + D +  QGI+R  R L R     G   E R+D+A A +  GL  +  +   +H  A  +     AP+    +RL P V+E  ++ L   E
Sbjct:    5 FATATRIIFGPGT--VGEVPSLAAGFGQRAFVVTGQNQASAIPLLEQLNGQGIEFTTYPVTGEPTTTVALEGAWQARKVGAQMVIGLGGGSVLDAGKAIAALLTNSGD-------------------LFDYLEVIGRGQ-----PLKEPSAPYIAIPTTAGTGAEVTRNAVLASPE-----HKVKVSLRSPTML---PRLAVVDPELTYSMPPAVTASTGLDALTQVMEPYVSHLANPLTDAVCRQGIQRAGRSLRRAFD-NGQDTEARKDMALASLFGGLALANAKLGAVHGFAGPIGGMFPAPHGAICARLLPFVMETNVNALASRE 298          
BLAST of mRNA_S-dermatodea_contig1239.1495.1 vs. uniprot
Match: A0A2W4RZR6_9BACT (Alcohol dehydrogenase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2W4RZR6_9BACT)

HSP 1 Score: 112 bits (279), Expect = 4.960e-23
Identity = 104/332 (31.33%), Postives = 152/332 (45.78%), Query Frame = 1
Query:  202 FSADTRVVFGVNALEIGLVELFDMGLKRALIVTGWNQARADPIVWELLPRGFELAWHSVSTEPSLTDVAKGVSLALDHRADCVLAMGGGAVIDAAKAIAAIAYADKDPNKAAKRLLAAASQPRCATCWDTVPDAGAAEDDDLAPLLGP-IPLVAIPIIAGVGAEVTPMATILDDDDPLEPEKVTVGFHNSAAAMPAPFMAIVEPRLMMRVPLETTWSRAFVALAGCIEGYVAGRGF-VPDLLSHQGIERVSRCLSRELGFRGPLYEEREDIAFAGVIRGLVASRNEWSFLHQLASAVAVASGAPYAECVSRLFPRVLEAQISGLRREEAAFA 1191
            F+   R++ G  A           G  R  +VTG   ARA+P+   L      +A    + EP L D+ +G +   D  AD V+A+GGG+VID AKA+AA+A    D       LL            D +   GA       PL  P +P+VA+P  AG G+EVT  A +   +  ++    +V           P +AIV+P L + VP + + S    AL   IEGYV+ R   + D L+  GI R +  L R +   G   + RED+A A +  G+V +      +H  A  +   +GA +    + L P V+ A +  LRR  AA A
Sbjct:    4 FATAARIIVGRGAAREAGAAAAACG-SRVFLVTGRTPARAEPVRASLDAARLPVAIWPTAGEPCLEDITRGAAALADAGADVVVAVGGGSVIDTAKAVAALAANGGD-------LL------------DYLEVIGAGR-----PLNRPALPVVAVPTTAGTGSEVTRNAVLGSREHGVKASLRSVHM--------LPRVAIVDPELTVDVPPDVSASTGLDALTQLIEGYVSARATPMTDALAAAGIPRAAAALPRVVR-DGRDLDAREDMAIAALWSGMVLANGGLGAVHGFAGPIGGMTGAAHGAICAALLPHVMAANVDALRRRGAADA 301          
BLAST of mRNA_S-dermatodea_contig1239.1495.1 vs. uniprot
Match: A0A661JRH8_9DELT (Alcohol dehydrogenase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661JRH8_9DELT)

HSP 1 Score: 112 bits (279), Expect = 5.100e-23
Identity = 101/329 (30.70%), Postives = 156/329 (47.42%), Query Frame = 1
Query:  202 FSADTRVVFGVNAL-EIGLVELFDMGLKRALIVTGWNQARADPIVWELLPRGFELAWHSVSTEPSLTDVAKGVSLALDHRADCVLAMGGGAVIDAAKAIAAIAYADKDPNKAAKRLLAAASQPRCATCWDTVPDAGAAEDDDLAPLLGPIPLVAIPIIAGVGAEVTPMATILDDDDPLEPEKVTVGFHNSAAAMPAPFMAIVEPRLMMRVPLETTWSRAFVALAGCIEGYVA-GRGFVPDLLSHQGIERVSRCLSRELGFR-GPLYEEREDIAFAGVIRGLVASRNEWSFLHQLASAVAVASGAPYAECVSRLFPRVLEAQISGLRREE 1179
            F+   R++FG   + E+GL+ +  MG K AL++TG +  RA  ++  L  +G  +    V  EP    VA+G  LA   R D V+ MGGG+VIDA KAIAA+     D                    +D +   G A+     PL    P +AIP  AG GAEVT  A ++  +  +   KV++  +     M  P + +V+P L   +P   T +    AL   IE YV+     + D +  +GI R +R L  E+ +R G     RED+A A ++ G+  +  +   +H  A+ +     AP+    +RL P V+E  +  L+  E
Sbjct:    5 FATAGRIIFGQGKVGEVGLLAV-QMG-KHALVITGSHVERAAGLIQVLEDKGMRVTTFQVRGEPDTGIVAEGSRLARLRRCDVVIGMGGGSVIDAGKAIAALVTNHGD-------------------IFDFLEVVGKAQTITRPPL----PYIAIPTTAGTGAEVTKNAVLVSKEHGV---KVSMRSY-----MLLPRIVVVDPELTYSMPPHVTANTGLDALTQLIEAYVSLNANPITDGMCREGIMRSARSL--EIAYRDGNNAAAREDMAIASLLSGMALANAKLGAVHGFAAPLGGMFNAPHGAICARLLPIVMETNVQALKTRE 298          
BLAST of mRNA_S-dermatodea_contig1239.1495.1 vs. uniprot
Match: A0A399D656_9BACT (Iron-containing alcohol dehydrogenase n=1 Tax=Mariniphaga sediminis TaxID=1628158 RepID=A0A399D656_9BACT)

HSP 1 Score: 112 bits (279), Expect = 5.180e-23
Identity = 98/321 (30.53%), Postives = 155/321 (48.29%), Query Frame = 1
Query:  202 FSADTRVVFGVNALEIGLVELFDMGLKRALIVTGWNQARADPIVWELLPRGFELAWHSVSTEPSLTDVAKGVSLALDHRADCVLAMGGGAVIDAAKAIAAIAYADKDPNKAAKRLLAAASQPRCATCWDTVPDAGAAEDDDLAPLLGPIPLVAIPIIAGVGAEVTPMATILDDDDPLEPEKVTVGFHNSAAAMPAPFMAIVEPRLMMRVPLETTWSRAFVALAGCIEGYVAGRG--FVPDLLSHQGIERVSRCLSRELGFRGPLYEEREDIAFAGVIRGLVASRNEWSFLHQLASAVAVASGAPYAECVSRLFPRVLEAQI 1158
            F   T++VFG   ++     L  MG +  L+VTG  + RA P+   LL   FE+ + SV TEPS   +++GV +A +   D V+ +GGG+VID+AKAIAA+      PNK    LL            D +   G  +      L  P+P +AIP  AG GAEVT  A I   +      +V V   +    +  P +A+V+P L + +P E T +    AL   +E +V+ +   F+ D    +G+ RV+  L +     G   + RED++FA ++ G+  +  +   +H  A  +      P+    + L P V+E  +
Sbjct:    7 FVTATQIVFGTGTVKKVRQMLEGMG-RNILLVTGEKRERAKPLAESLLSGEFEVNYFSVGTEPSAGIISEGVKMARETGCDVVVGLGGGSVIDSAKAIAALV-----PNKG--ELL------------DYLEVIGKGQKL----LEKPLPFIAIPTTAGTGAEVTKNAVIHSPE-----HRVKVSLRSP---LMFPDVAVVDPELTVSMPPEITATTGMDALTHLLETFVSNQANPFI-DTFCREGMHRVAASLKKAFE-NGTDLKAREDMSFASMLGGMSLANVKLGAVHGFAGPMGGMFPVPHGAVCATLLPAVMEVNL 293          
BLAST of mRNA_S-dermatodea_contig1239.1495.1 vs. uniprot
Match: A0A2W4P7Q3_9CHLR (Alcohol dehydrogenase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2W4P7Q3_9CHLR)

HSP 1 Score: 111 bits (277), Expect = 9.170e-23
Identity = 95/327 (29.05%), Postives = 144/327 (44.04%), Query Frame = 1
Query:  202 FSADTRVVFGVNALEIGLVELFDMGLKRALIVTGWNQARADPIVWELLPRGFELAWHSVSTEPSLTDVAKGVSLALDHRADCVLAMGGGAVIDAAKAIAAIAYADKDPNKAAKRLLAAASQPRCATCWDTVPDAGAAEDDDLAPLLGPIPLVAIPIIAGVGAEVTPMATILDDDDPLEPEKVTVGFHNSAAAMPAPFMAIVEPRLMMRVPLETTWSRAFVALAGCIEGYVAGRGF-VPDLLSHQGIERVSRCLSRELGFRGPLYEEREDIAFAGVIRGLVASRNEWSFLHQLASAVAVASGAPYAECVSRLFPRVLEAQISGLRREE 1179
            F+  TR++FG   L+    E   +G   AL+VTG N+ RA  ++  L   G +     V +EP++    KGV+ A     D V+ +GGGA IDA KAIAA+     +P    + +    S  R                        P+P +A+P  AG GAEVT  A +   +      +V V   +    +  P +A+V+P L   +P E T      AL   +E +V+ +   + D L  +G+ R +R L R   F  P    RED++ A +  GL  +      +H  A  +      P+    +RL P V+E  I  LR  E
Sbjct:    5 FATATRIIFGKGTLQEAGREAAALG-SHALVVTGANRDRATRMIELLEASGVKATVFQVDSEPTVDTALKGVTAARQFNCDLVIGIGGGAAIDAGKAIAALTANPGEPLDYLEVIGKGQSLSR-----------------------PPLPYMAVPTTAGTGAEVTRNAVLASPE-----HRVKVSLRSP---LMLPKLALVDPELTYSMPPEVTAMTGMDALTQVLEPFVSVKANPLTDALCREGMARAARSLRR--AFEEPTDAAREDMSLASLFGGLALANAALGAVHGFAGPLGGMYPIPHGVACARLLPYVMETNIRALRERE 297          
BLAST of mRNA_S-dermatodea_contig1239.1495.1 vs. uniprot
Match: A0A7C7DRA6_9CHLR (Iron-containing alcohol dehydrogenase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C7DRA6_9CHLR)

HSP 1 Score: 111 bits (277), Expect = 9.300e-23
Identity = 102/326 (31.29%), Postives = 157/326 (48.16%), Query Frame = 1
Query:  202 FSADTRVVFGVNAL-EIGLVELFDMGLKRALIVTGWNQARADPIVWELLPRGFELAWHSVSTEPSLTDVAKGVSLALDHRADCVLAMGGGAVIDAAKAIAAIAYADKDPNKAAKRLLAAASQPRCATCWDTVPDAGAAEDDDLAPLLGP-IPLVAIPIIAGVGAEVTPMATILDDDDPLEPEKVTVGFHNSAAAMPAPFMAIVEPRLMMRVPLETTWSRAFVALAGCIEGYVAGRGF-VPDLLSHQGIERVSRCLSRELGFRGPLYEEREDIAFAGVIRGLVASRNEWSFLHQLASAVAVASGAPYAECVSRLFPRVLEAQISGLR 1170
            F+   R++FG   L EIG +     G +RAL+VTG N  RA+ ++  L     + + +SV+ EP++ D   GV+ A    A+ ++A GGG+VIDA KAIAA+A    D                    +D +   G A+     PL  P +P++AIP  AG G+EVT  A +     P    KV+V    S + +P   +A+V+P L   +P   T +    AL   IE +V+ R   + D +  +G++  +R L R +  +G     R D+AFA +  GL  +      +H  A       GAP+    + L P V+ A +  LR
Sbjct:    5 FATAQRILFGEGTLAEIGAISR-GFG-ERALVVTGANPQRAERLLALLAAAELQPSLYSVAHEPTVEDAIAGVAAAKRAGAEVIVAFGGGSVIDAGKAIAALATNPGD-------------------VFDYLEVIGRAQ-----PLTQPSLPVIAIPTTAGTGSEVTRNAVLAS---PAHRVKVSV---RSPSMLPR--VALVDPELTYSLPAAVTAATGMDALTQLIEPFVSSRANPLTDAICREGLQHAARSLQRAVR-QGSDVAARRDMAFASLCGGLALANAGLGAVHGFAGPFGGMYGAPHGAVCAALLPEVVAANVKALR 295          
BLAST of mRNA_S-dermatodea_contig1239.1495.1 vs. uniprot
Match: A0A2N9JIV2_9ACTN (Fe-ADH domain-containing protein n=2 Tax=Micropruina glycogenica TaxID=75385 RepID=A0A2N9JIV2_9ACTN)

HSP 1 Score: 110 bits (275), Expect = 1.890e-22
Identity = 103/335 (30.75%), Postives = 149/335 (44.48%), Query Frame = 1
Query:  202 FSADTRVVFGVN-ALEIGLVELFDMGLKRALIVTGWNQARADPIVWELLPRGF-ELAWHSVSTEPSLTDVAKGVSLALDHRADCVLAMGGGAVIDAAKAIAAIAYADKDPNKAAKRLLAAASQPRCATCWDTVPDAGAAEDDDLAPLL-GPIPLVAIPIIAGVGAEVTPMATILDDDDPLEPEKVTVGFHNSAAAMPAPFM----AIVEPRLMMRVPLETTWSRAFVALAGCIEGYVAG-RGFVPDLLSHQGIERVSRCLSRELGFRGPLYEEREDIAFAGVIRGLVASRNEWSFLHQLASAVAVASGAPYAECVSRLFPRVLEAQISGLRREEA 1182
            F+   R+VFG   A E+  + + + G  R  + TG     ADP  +  L  G  +LAW SV  EP+L D+  GV+ A DH AD ++ +GGGAV+DAAK IAA+A                   P      D +   GA       PL   P+P VA+P  AG G+EVT    +   +            H    ++ +P M    A+V+P L +  P   T S    AL  C+E YV+     + D    QG+ R  R L R     G   + R D+A   ++ GL  +  +   +H LA  +   +GAP+  C + L        I  LR ++A
Sbjct:   18 FATAHRIVFGAGRAAELPAL-IGEFG-TRPFVCTG-----ADPTRFSGLLTGVADLAWWSVGGEPALDDIRAGVAAARDHGADVLVGLGGGAVLDAAKLIAALA-------------------PNGGDLLDYLEVIGAGR-----PLAESPLPFVAVPTTAGTGSEVTSNGVVTSPE------------HGVKVSLRSPSMLARVALVDPELTLGCPPSVTASAGLDALTQCLEPYVSPFANPLTDGFCEQGLRRAGRSLRRAYA-HGDDLDARTDMAVCALLGGLALANAKLGAVHGLAGVIGGLTGAPHGVCCAALLVPTSSVTIDALRADDA 308          
BLAST of mRNA_S-dermatodea_contig1239.1495.1 vs. uniprot
Match: A0A1V4RYP8_9DELT (Alcohol dehydrogenase n=2 Tax=unclassified Desulfobacteraceae TaxID=231684 RepID=A0A1V4RYP8_9DELT)

HSP 1 Score: 108 bits (271), Expect = 5.610e-22
Identity = 99/332 (29.82%), Postives = 154/332 (46.39%), Query Frame = 1
Query:  202 FSADTRVVFGVNALEIGLVELFDMGLKR---ALIVTGWNQARADPIVWELLPRGFELAWHSVSTEPSLTDVAKGVSLALDHRADCVLAMGGGAVIDAAKAIAAIAYADKDPNKAAKRLLAAASQPRCATCWDTVPDAGAAEDDDLAPLLGPIPLVAIPIIAGVGAEVTPMATILDDDDPLEPEKVTVGFHNSAAAMPAPFMAIVEPRLMMRVPLETTWSRAFVALAGCIEGYVAGRGF-VPDLLSHQGIERVSRCLSRELGFR-GPLYEEREDIAFAGVIRGLVASRNEWSFLHQLASAVAVASGAPYAECVSRLFPRVLEAQISGLRREEA 1182
            F+  +R++FG   ++    E+  M  K    AL+VTG N  RA  +   L   G E+A  SVS EP++    +GV LA  + +D V+ MGGG+V+D AKAIAA+     D        L    + +  +C    P A               P +AIP  AG GAEVT  A +   +      +V V   +       P +AIV+P L   +P   T S    AL   +E +V+ +   + D +  +G++R +R L R   F+ G     RED+A A +  GL  + ++   +H +A  +      P+    +RL P V+E  +  L+R  +
Sbjct:    5 FATASRIIFGQGTVK----EVAPMASKMGNCALLVTGRNVERAGLLSGSLKNTGMEIATFSVSHEPTIELTTEGVELARQNASDIVIGMGGGSVVDTAKAIAALLTNSGDMTD----YLEVIGRGKPLSC----PSA---------------PCIAIPTTAGTGAEVTKNAVLTSQE-----HRVKVSLRSPTML---PDLAIVDPELTYSMPPSLTASTGLDALTQVLEPFVSVKSNPLTDTICIEGLKRAARSLHR--AFKDGNDTRAREDMAIASLFGGLTLANSKLGAVHGIAGPMGGMFPVPHGVICARLLPFVVEVNVKALQRHNS 299          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1239.1495.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRP4_ECTSI3.460e-15751.57Similar to Iron-containing Alcohol Dehydrogenase n... [more]
A0A6H5JQN5_9PHAE9.660e-13054.99Fe-ADH domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A0S8BNM8_9CHLR2.860e-2330.70Alcohol dehydrogenase (Fragment) n=1 Tax=Anaerolin... [more]
A0A2W4RZR6_9BACT4.960e-2331.33Alcohol dehydrogenase n=1 Tax=Acidobacteria bacter... [more]
A0A661JRH8_9DELT5.100e-2330.70Alcohol dehydrogenase n=1 Tax=Deltaproteobacteria ... [more]
A0A399D656_9BACT5.180e-2330.53Iron-containing alcohol dehydrogenase n=1 Tax=Mari... [more]
A0A2W4P7Q3_9CHLR9.170e-2329.05Alcohol dehydrogenase n=1 Tax=Chloroflexi bacteriu... [more]
A0A7C7DRA6_9CHLR9.300e-2331.29Iron-containing alcohol dehydrogenase n=1 Tax=Chlo... [more]
A0A2N9JIV2_9ACTN1.890e-2230.75Fe-ADH domain-containing protein n=2 Tax=Microprui... [more]
A0A1V4RYP8_9DELT5.610e-2229.82Alcohol dehydrogenase n=2 Tax=unclassified Desulfo... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1239contigS-dermatodea_contig1239:4117..15086 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score132.5
Seed ortholog evalue6.8e-28
Seed eggNOG ortholog483219.LILAB_22165
Preferred nameeutG
KEGG rclassRC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273,RC03062,RC03063
KEGG koko:K00001,ko:K01714
KEGG ReactionR00623,R00754,R02124,R04805,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310,R10147
KEGG Pathwayko00010,ko00071,ko00261,ko00300,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,ko01230,map00010,map00071,map00261,map00300,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220,map01230
KEGG ModuleM00016,M00525,M00526,M00527
EggNOG free text desc.Iron-containing alcohol dehydrogenase
EggNOG OGs1MVPH@1224,2WIY2@28221,2YUJC@29,42NP2@68525,COG1454@1,COG1454@2
EC1.1.1.1,4.3.3.7
COG Functional cat.C
Best tax levelMyxococcales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSimilar to Iron-containing Alcohol Dehydrogenase
Ec32 orthologEc-00_003330.1
Exons9
Model size1873
Cds size1872
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924246.381294-CDS-S-dermatodea_contig1239:4116..48331622924246.381294-CDS-S-dermatodea_contig1239:4116..4833Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1239 4117..4833 -
1694079122.0548215-CDS-S-dermatodea_contig1239:4116..48331694079122.0548215-CDS-S-dermatodea_contig1239:4116..4833Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1239 4117..4833 -
1622924246.3949482-CDS-S-dermatodea_contig1239:9965..101021622924246.3949482-CDS-S-dermatodea_contig1239:9965..10102Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1239 9966..10102 -
1694079122.071485-CDS-S-dermatodea_contig1239:9965..101021694079122.071485-CDS-S-dermatodea_contig1239:9965..10102Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1239 9966..10102 -
1622924246.4064198-CDS-S-dermatodea_contig1239:10847..109421622924246.4064198-CDS-S-dermatodea_contig1239:10847..10942Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1239 10848..10942 -
1694079122.0891633-CDS-S-dermatodea_contig1239:10847..109421694079122.0891633-CDS-S-dermatodea_contig1239:10847..10942Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1239 10848..10942 -
1622924246.457943-CDS-S-dermatodea_contig1239:11278..114571622924246.457943-CDS-S-dermatodea_contig1239:11278..11457Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1239 11279..11457 -
1694079122.1001453-CDS-S-dermatodea_contig1239:11278..114571694079122.1001453-CDS-S-dermatodea_contig1239:11278..11457Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1239 11279..11457 -
1622924246.4662807-CDS-S-dermatodea_contig1239:11887..120471622924246.4662807-CDS-S-dermatodea_contig1239:11887..12047Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1239 11888..12047 -
1694079122.1110313-CDS-S-dermatodea_contig1239:11887..120471694079122.1110313-CDS-S-dermatodea_contig1239:11887..12047Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1239 11888..12047 -
1622924246.4743233-CDS-S-dermatodea_contig1239:12894..130661622924246.4743233-CDS-S-dermatodea_contig1239:12894..13066Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1239 12895..13066 -
1694079122.123681-CDS-S-dermatodea_contig1239:12894..130661694079122.123681-CDS-S-dermatodea_contig1239:12894..13066Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1239 12895..13066 -
1622924246.4824436-CDS-S-dermatodea_contig1239:13505..136331622924246.4824436-CDS-S-dermatodea_contig1239:13505..13633Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1239 13506..13633 -
1694079122.136013-CDS-S-dermatodea_contig1239:13505..136331694079122.136013-CDS-S-dermatodea_contig1239:13505..13633Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1239 13506..13633 -
1622924246.4908395-CDS-S-dermatodea_contig1239:13937..141241622924246.4908395-CDS-S-dermatodea_contig1239:13937..14124Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1239 13938..14124 -
1694079122.1433542-CDS-S-dermatodea_contig1239:13937..141241694079122.1433542-CDS-S-dermatodea_contig1239:13937..14124Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1239 13938..14124 -
1622924246.5006597-CDS-S-dermatodea_contig1239:14989..150861622924246.5006597-CDS-S-dermatodea_contig1239:14989..15086Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1239 14990..15086 -
1694079122.1564574-CDS-S-dermatodea_contig1239:14989..150861694079122.1564574-CDS-S-dermatodea_contig1239:14989..15086Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1239 14990..15086 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1239.1495.1prot_S-dermatodea_contig1239.1495.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig1239 4117..15086 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig1239.1495.1

>prot_S-dermatodea_contig1239.1495.1 ID=prot_S-dermatodea_contig1239.1495.1|Name=mRNA_S-dermatodea_contig1239.1495.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=624bp
ELQPPHGKRRCRPSSRLHQAMPGLPEGDEGIADLESLDNPAKDTNYGDDG
SLQYGVSNAAAGPSDQFFSADTRVVFGVNALEIGLVELFDMGLKRALIVT
GWNQARADPIVWELLPRGFELAWHSVSTEPSLTDVAKGVSLALDHRADCV
LAMGGGAVIDAAKAIAAIAYADKDPNKAAKRLLAAASQPRCATCWDTVPD
AGAAEDDDLAPLLGPIPLVAIPIIAGVGAEVTPMATILDDDDPLEPEKVT
VGFHNSAAAMPAPFMAIVEPRLMMRVPLETTWSRAFVALAGCIEGYVAGR
GFVPDLLSHQGIERVSRCLSRELGFRGPLYEEREDIAFAGVIRGLVASRN
EWSFLHQLASAVAVASGAPYAECVSRLFPRVLEAQISGLRREEAAFADPS
PRRRQLPRSPENASRTDATNDGSTASSGEDFVGSDPEVVSQEEENDGWEA
EGAGDAVLPAVAAGSRSSGGGGGGVSRASSEEEDRYGRACAALLKYRRVA
GFVTGDRKGSVPEAIIGWLDARLLDKNVASLYRAGLRPEHAVSVVEALLR
EGAGRAVDGEGATFGGLGEDMVMAIVLGEAAPRKDDDGTSDAAGEGAVQD
SAAVEELSVAAPAGPTQTGPWQN*
back to top

mRNA from alignment at S-dermatodea_contig1239:4117..15086-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig1239.1495.1 ID=mRNA_S-dermatodea_contig1239.1495.1|Name=mRNA_S-dermatodea_contig1239.1495.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=10970bp|location=Sequence derived from alignment at S-dermatodea_contig1239:4117..15086- (Saccorhiza dermatodea SderLu1190fm monoicous)
GAGCTGCAACCACCACACGGGAAGCGGCGATGTCGCCCAAGCTCGAGACT TCATCAGGCAATGCCGGGGTTACCCGAGGGGGATGAAGGCATTGCAGGTG CGGTGAGCCTTTCGTGGCGGGACAAACGGAGTTTGGAGCGTTGAGGTTGA CAAAGCGGGGGGTAAAGTCGGCGTGAGCTGCCGTTGTGAGATCGCGATGT GCGGGCCGCTTGTCGTTGAACCAATTCGTAGACTTTGTTCGTTGTCAAAA ATATGTGCACTTGTCGCCACTCAGCATCTACGGGTAGCTTTTGTTCCTGG ACCGTTCCTGCCGTTACCTCGTCAACGAACTCTACTGCGCACTTACCGCT CTCATTAGCCATGCCAATCGCACTCGTGATGGACCGTGCCTGAACCACAC TGCCAAGGTGCCTCTTTACTTCCATGTGATTGCGATGAGCCTACACAGTT TGCACGTGGGTCTTATCAGAATACGGTCTACCCAAAAATCAACAGCGGTG TCGGTCGTTGTATGTACGATTGGGGCTTGAACCCGAGACCACGTGTGTAC ACTCGTATGTGTTGACGCACTGATTCGTCGAGTAGCCTGAATCGCATGTC CATTGATAGCTTAAAACGTACTGTCTCGCGAACACATGCTCTCTCCAATC GGAAGAAGCGGCGCAGCCTCGGTACGACGTTATTGTGTGTGCAATGCCGT GGAACCTAGATGAAACATGCAGCATGCCTAAATTGTATTCGGCGGCACTG TTGTTGGTGTTCTTCACCGCTACTGGAGCAGTTTGCTACAGGAGCAGAAA ACTGATCCCGGTGAACCTTGGTTCCAAGCGATATTCACTACTAGTGTAAT AATGTTGATTTGTAGTGACATAAAAGAAACGAACGAGTCATATCCGAACA CAAACGGCTTCCGCTGCCTTTGCACGGACGCCCCCACCAAAACCACCCTT GTGAAACCCAAGACCTGGAGAGCTTGGACAATCCCGCAAAGGACACCAAC TACGGTGATGACGGCTCCCTACAGTACGGCGTCAGCAATGCGGCAGCTGG ACCTTCGGATCAGTTCTTCTCTGCCGACACCCGCGTCGTTTTCGGCGTGA ACGCTCTCGAGATCGGGCTTGTCGAGCTGTTCGACATGGGCCTTAAACGG TGCGAGCAGAAATACTGTGTGGCCGCCGGGGGGAAGGGTATTGCCGGCAA TTCGGAGGAGGTTTGGGGTTAGGCAGGGGGAGATTTATGTTTGGTGTTTG TCCTTGTACAGGTGATGTGATTGTAGACTGCAAACGTCATGAGCTGCCAG GTGCCGCTTGGGTTGGCGCACGCTCCGCAGGTGCTTGCTGCCGGTGTTAA AAAAACGTCCTTATCGCGTGCCATGCACATTTTTAGGGCAACGGGCGTGT TCGCGCTTGCGTAACATCTGATCGCTTCGTCACGCGCCATTTTCTTTGCT CAGGGCGCTCATCGTGACGGGATGGAACCAGGCGCGCGCCGATCCAATTG TTTGGGAGCTACTGCCGAGAGGGTTCGAGCTCGCTTGGCACTCGGTGTCG ACCGAGCCGTCCCTCACCGACGTCGCGAAAGGTGAGACATTGACCACTCC GTCTTGCATCACCGGGTGCAAACAAGGCAAATTAGGCCTATTGTGCGGCT ATGTGGCTTCAGGCTGGTGTTCCGTTGCAATCCAGAGTCCAAAGTGCTCA AATGTACATGTTGCCGGTTGCTCGATACGGGCCGCGTTCCGTCTTGGCGG TCATTCCTCCAAAGAGAAATGCTAACACAGATATCGCTCGCCCGCGCGGT TGACCGCTGCTTGGGAGTCATCAATATCCCCCGTCGATCGTGTGCTTCTG CTTACAGCAGCACCCTTCCTGCACCCGCATGTTTTCGGCGAAGTTGAGCG CTCGGCAGTCTAAAAGAAAAATCAAGCTATCGTGGTCATGAGATTTATTG ACCTCCTTAACAACTTAATGGTATTGCGTGCCTCGTGACGAACCTGTGTT GTGGTCGGCATGGTATTAAGGCGTCTCGCTGGCATTGGACCACCGGGCGG ACTGCGTGCTGGCGATGGGGGGGGGAGCGGTGATCGATGCCGCCAAGGCC ATCGCGGCCATCGCCTATGCAGACAAAGACCCCAATAAGGCAGCCAAGCG TCTGCTAGCAGCTGCCAGCCAGCCGAGGTGTGCCACGTGTTGGTGCTACT GCATGTGTATTTACATGTTTCGCTTCTAACTGATCAATTCATTTTTTATT CCGCCTATGATCACGAGGATCCCCCCGGTGTGCTCCTTCGGTTTTAGTCG TGTTTTGAGTTTATCACTCCAATATCTCACCGATTTCTCGGGTTTTGCCG ACTTACGTCTTCGTGTTCGTGGCAGAGCAGAGAACCCCCCCCCGACCCCC ACGAGGTTCAAACCCCGACAATCAAACCCCGAAAATCCCGCGATTATCAG AGCAGCGGTTTGGTTTTGATTGTGTCATCGATGGAATGTGTCTCTGAGGG TGGAAAAATTGCATATGTTTCTAAATATTTAATTTCAAGTGGTTTGCTTG ACCTCTAACCCTTTTCGCAGCGACTGGGAGCACGGCACCGAAGGGCTTCG TAAATTGCCGACGAGCGGCTATGTATACAACAAGCAGACATGTGATGTGA ATGTTGATGATTCGAGATGGACCACGGCAGGGCGGATAATCGCATTGCTG GATATTTACCGGCCGCCCTTGCGTTTGTATCAAGGTGGACGGTACGCCTA GCGTGGCGCTGTAAAATCGAGAGCGGGTTGCAAGAGCTGTGCGCCTTGGC TTCTATAAAACGGTGATGCTTGGAGCGAATGGGTTCAACTGCGGCCGCCT TTCCACCGTGCTGCGTACAGATTAACGCCCGAACCCCGCCCCGTGGCCAA ACTCCTCCCCCACCCCCAACGTTGCGAGGTCTATGGTCTAACGACTACGG CATGCACGATCAATGAGTACACCCCCGCACCCCCAACGTTGACTTTACCA AATCTCCTGCATATCTTGCTCTCCCTCAAACATGGACAGGGACACCGTGC CAGATGCCGGAGCAGCGGAGGACGACGACCTGGCTCCCCTTTTGGGGCCC ATCCCCCTTGTTGCTATCCCCATAATTGCCGGAGTGGGGGCAGAGGTCAC TCCGATGGCGACTATCCTCGACGATGACGACCCTCTGGAACCTGAGAAGG TGTAGATGCCGGGGCGAACGCCTGGAGGGGGGAGTAGGAGGTTTGCTGCG CTGCTGCCACCATTTCGCTTTCACTGCTACAAGTCAGGACAGTTGCAGTT TGACTGTAGAGAGTGGTTGCCAATTCGTCGGAAATTCCCAAATAGGACTA ACTGGGCCCCCGCCCAACAAAGATGGATCCCTGCAAAAGCAGTCCATATG TTCAGTGTTTCACGTGTTTGGAAAGGGCATGTGACACCGGGGCTGAGCTT GACGTATCAACGCTTGCTTCCTAGCGTTGTACACGCTCACCAGACAAATA TGCTACGTCACAAACGCGACTCTGATGACAACGCCGCGCAGCCCATCGCC TCTCCCCGTCTTGAGCCCATAGCCCACAGCCCATAGCCCACCTTCTCTCT TCCCCTGGTTCGCTGGTTTTCGGGTAAAGGTTACGGTGGGTTTCCACAAC AGCGCGGCGGCGATGCCCGCCCCGTTCATGGCCATCGTCGAGCCCCGGCT GATGATGAGGGTGCCCCTGGAGACGACGTGGTCCAGGGCGTTCGTGGCGC TCGCGGGGTGCATCGAGGGCTATGTGGCCGGCAGAGGATTCGTGCCTGAC TTGCTGAGGTATAATCTGCTGGCATCTTGGGCGGAGTGAGGGTGGGGGGT GGTTACATTTTATAGTGTTTTCGGAAGGCGCGTAGGGACTTGCTAGCCTT GCCTTTGCCATTCGACCGTTCGAAAACGCGTGTATGGTGTGCTGCGCTGT AAAAGGCGTGCTCTGTAGAGCTACCTGCACTCGATTATCCGGTCCATGGA GTGGCAAGTTTTCGTAGGCTTTTCTGCAGGAAGGGTAAACCGTATTGTTT TCGCCGCGCGTTTCTCTACTCTTTAAACTCCAATGAATCATTCCACCACG GTGCCTCGCCGCACCGCGCCACACCGATCGCATCACACGCGCAGCCATCA GGGCATCGAGAGGGTGTCGAGGTGTTTATCGAGAGAACTGGGGTTCCGCG GGCCTCTGTACGAAGAACGCGAAGACATCGCCTTCGCAGGTATGTGGAAA CCTACTTTCTTTTGTGGTTGGCAAGGACGCCATGAATGAGCATCCCCAAA GCTGACCCGAAGATGTACAATCTGGCTTCCGGCCGCGGGGTTGGGGAACA AGCACATGTATTGTCCCTGGGGTACATTGGGAGAATAGCGGAGGCCGAAG ATTTGGGGATCAAACGAAATCACCTCATGTCAACCATAATGTCATTACTC TTTTTCACGTGGCTGTTTCTCGAATACCAAGTCCCTAAGGCTATTAAAAA AAATTCGTGCGGGGGGTCGAGGGGGGGGGGGGAGTCTTTGGAGTCCTTAC TTTTTTAGGCGGGGTGGGGAGTCTGCCTCTCGGATTGTCACACCCGCTGT CCCTCGTGGATGGCGCAAGGGTGGCTCGCTCACAGAACGCGAAACATTGT TCCCAATTAGCAAGGCACGAAAATCGTTGTAACTCTCTCTCCTGGTGGGT TGATCGTTGTGTTCACGCACCAAATCTGATCGAATTTGAAGGCAGGATCT AAGGGCATGAGAAGAAAACCAACGCGAGCTGCGAGAACTCTGCTGCTGTT TGTAAAGGTCGATATTCTGTAACAAACCGCCGCCGCCGCCGCCAGCCGTC GTAAAGTACCCTCCGATCGTTGTGGAATGTCTCCCTTGGTTCTGTTTTTC TCCGATCTTCAACCAAGCACGTGTGGCACTTAAGTGCTGGAACCGAACGC GGCATCCCTGTATGAAAAACGTGCTCATGTGCAGGCGTTATTCGAGGCTT GGTGGCGTCTCGTAACGAGTGGAGTTTCCTTCACCAGCTGGCGTCGGCCG TGGCAGTCGCCTCCGGTGCCCCCTACGCGGAGTGCGTCTCTCGCCTTTTC CCAAGGGTTCTAGAAGCACAGGTGACTACTGTTGAAGCATGGGGAACGTG ATAATTGTGTTTCCTGTTGTTGTTCTTGTTTCAATCCAAAGACGCGCGTA AGGCTACGCAGAGCACTGTATTCGGTGTCGCCTCTGTGAATGATTCATGT CCTCCCGGACGTGGATGGCGCTAAAGCTATGATATTGCTTCTGGGCAAAG TACATAAATGCTCGCCTATTCTACTCGCGTCGAGATGTCCACGCGTGCAT GACGAATTTTCTGCATGTATGTGCTGCATTCATTGTAGTACGTTTAACCT CGCCGGCGATAAGAGTCTTGCACTTCTACCGAAGGGCTTCGGCGGTATCA CGGGAGAAATATATCATTAATGTGGGTCACACATGATAGCGTCTTCAAAC AACGCGATCCAGCACGCAGTTTTTTCTTGAAATGCATGAAACACAATGAC GATGGATGGCAACGACGTGAAAAGCAGAAGTCTTCAGCCTGCAGAATTCA CCGTCTGGAGAGTTGTTCGCATCTAGCCACACAACGGTTAGAGGTTTAAC TACATCTGAAGGCTGTCCGCACCTAGGGGACGCTTTGTCCATCAGCCGGA TGCCGCACACCTACCCTGCATGTACAGTCAGAAGTGCTGCCGATTTTCCA CGCTCTTCAAGTGAATGAAGTACGTTGGTCGACAGGAGACAGACGCATGC GACTCTTGGCAAGAATATAGAAGTACCAGAAAGACTCTCTATGGTTAGCG GAACCTGTCGGTGGGTATCGACGGTCGCTGAGATATATTCCCCACGTGTC TCTAAAAAAGCAACCGTGCCACACACAGCTGATTATATACTTGAACAAGT CGAAAAATATGCTCCGCGCATGCGCGTCAACGTCGGCCTTCGGCTTGTGT TGCTGCCATCGTCTCGTGGCCTGCCCCCCCCCCCCCCCCCTCCCCCGCCC CTCCACCAGTGTCACAAATGTCATCGCATCTGTCCCTCCCGATAAGTCGT CCATAGTTCCATTAGTTGTGCAAATTATAACAACTATAGCGCTCTCAAGA GTTGCCCTGCATTTTTCGCCTTGTTTGGCGTTTTATTGCGCGGGGGGTGC GGCTGGCGCCCCCGGACATCGATGATCGATCTTTCTCCGACCTCATCGAA CGAGTCGCTTACTCGCTTGCCCTGCACACCCCGGTGGGTGAACGCCCCCC GCTTTCCGCGACGATAGTACCACCTGCCTCCGTACACACCCGTGACGTCC AGTGTTTGACGCTGGCTAGTATTCCGCCGCGCTAGACTGGCCTGAGCGTA CCTGCTACGCGCCGCTTGGGGGCCCAGCTCTGCCACCCGCACACGCCGTC GATTGATCGATCGTACGCATTGGCTTGAGCAAGGTAATATACTGTCAAGA GTGAGGTTCAAGATTTTCCTTGCCAGCGAAACATCTCCCCTTGACATCGG TGGGCGTGGGCCTGGTACTCTGTCCGTCGGCATGTATTATGAGAGATGAC AGAACCGCATGATACAACAGCTCATATGTGATTAGAGGAAGCTCCCCTGT GCCACACCAACTTGTCCAGACACCTCCTCTGCGTTCCTATGTCAGCTAAA AGCCACATGTGTAGAACAGGCAAGTCAATGATCTCCCCAGGGGTTCCACC GCATGCATTTCCCAAGGTTCATTCGTGTGCCTTGGTGGCTGCACCTCTAC CATAGCCTTGAGTATCCAGCGCTGCCATCACTCCCCTAAATTTTGCTGTG GCAACCTGCAACTGAACTTGCTTGCTCATGAATCGAAACCAACTAAACCT TAACATATTGTTATCAGCAACCATATTCAATTGATCCGAAAATGATTCCA CGTCAAACGTAACACGCCTTGAAACCAAGCCCAAGCGTTCGCATTCATCT ACATCATCATTCTCAACATAAAATGAATCAAGCAATTAGTGTACTTCATT CAACGCAGTACGTCTTCAACCCCTTGAATGCTCTATAATGCGGCATGTTG CCTGTTAGCATATGAGATAAGGCTGCACAGCCAACTCTCTACATATATAG TCATTGCATCGTAGCATATCATTGTTGTGTTCAGCGTAAAACAACAAGCA GGCTTTTTGCATGAGCATGGAGGGACTGTCAGAATACAGTCATCATAGAC GCGGCGTGATTAGGCATCATGAGTACGTATGTACGTATTAGATTGGGCGT TGCGGAACATGGGGCTTCTAGAGAAGTCGTTTGTAGTGTCTACAACACAG TTAGGGGGTAAGGGGAATCGTATCGTCTAGAATGATCTCGAAGGAGAAGT GCGTCTAGACGCTGTTCTCAGGAAGGCTCCCAGTACCGGTTCCCAGTAAT CTGATTGGCCAGTAGCAGTATTTTCCAGAAGAATCATATCGGTTTGGTAT TCTAGATACCATCCCAGAAGGCTAGTAGTCTAGAAGTGTCATGGTTCGTG TGTTCGTATCGAGACGATGGTGCCTCGCCCACCCTCTCTCACTCTTCTCT AGCACCAACTTTCTCACAGTTCATTGTTGTCAAGTTATTTCTTGGCCGCA AGCGCCACTTTCAACATCAGCCTATTTTGCATCTTTGTGCACACTCGTGC CTGCTTGGTTAGCTGAATAGCGACCAGCGCAAGCCTCTACAGCCACATCG CCATTGAGTTGTGTAACCACGCATACGCCTACATTGCCAACATATGGGAA ATAGTGTGCCAGAAGAAACTCTAACGAAACTCCCCTAATAAAATCGTGGT AAATATCGAAACGTATTTTCTAAGTACCCACCGAATTAACTCGTAATTTT ACTCCCTAACTCACAACCAACCAAATCAAAAGTGTTATCCAAAACCTGCA AATTGTCATGCCGTTACTTTTATTGAAACCGGCACGGGTGGCCTTCGGTA AAAATACAATATTTCACGTGGCCTTACAGGTATTTCATGCCGTTCTCACT GACCGCCGGTAAATTTACGGCCAAGATTGCTTCCATGATAATATTTTCCC CATTCTCGGTTACGTTTATTGAAGTCTGGGCTATCGTACGGCCACGCGTC CTCTTACGGGCGCATCCTTGCAATGGTGTCCTGTGCCTCCACCCGTTGAT TATGCCCTTCACGCCGCTCATGTACCCTCCGGTCATCGAACCCGCCCTCT ACGATCCAGTCAAGTCCTGACCAGTTTCAGCGCAACACCTTACTGCCGCA CCCTTGCCGCTAGCACGCAGTCCACCTTCGCAAGGCAGCGTCTTCTTGCT CACGACCTTGCGCATGCGCTCCCGTTTGTGGCGCGCGCGCTTTAACAGTT TCGCACGCATTTTTTCTCGCGTTTGTATCGTACGAGCGCCTCTACTAAGG TTTGCATACGTTTCGGATGAAGCTACTCCCCCATCCAGACATCAATCCCA TCGTCCGACAGTGTCGAAATTGTCGTGCGTGCCTCCCTCCCAAACACCAC ATGCTATGGTGATACCTTGAGCCGCTCACTGAAAACAGTGTTCAGCGCCC ACTGCACAATGGAGGAGGAAAATCTCAGTCCCAAATAGGGCCCCGCCCAT CCCTCTGCATCGCCTCGAAGGTCTTGATGATCTAAAAACATCGCACTCCA CGGGTCGTCTGAAAACGCGGCGTAGTATTCAACAAGTGCCGCTCGAGTGG GGGTATGCGTACCCTCTGAGTCGCCACGTTTTGCCCTTCGACATCGATAG GCATCCACCTACAAGCATGGGCCAAGCGAGTCGTCGCCGAACAAATCGCC CGAAAAAATATTTGCACTTCCTTGTGGCTGGCTCGACTTTTTTTTCCAAC ACCCTCTGGTCGGCGACAACCGGGCCGTATCTCCCTTCGGTAACGCCGTT ACCAAATTGGCAAATACCGCCTAGGGATAGAGGTAGACAATCCCGGCCCA TTCCCACATGCCACCTGCTCCGCCAGCCAATTTCTTCTCCAGCGAGTATT GCCGCTCCTCTGCGTGGGGATTCCACACATATTCTCGTACGCTCCACCTT TGCGGCGGCGTACATTCACTTCAAGTCTAATACCGGTTTCGCGCCTCAGC CGATTCCGTCGGCAACATGTATGTATCCCAGCTTGGCCCTCCCTCTGCAC GGCACCTTCTTTGGCCTCCATGGGCACCTGGTGTTCACGGTCCCTGTTCG CCACCATTAAGGGCCTCCAGCCGAGTACCGCGTTTTTGGGGGCAAAACGT TCCCCTTGGACTTCTTCGAGTAGATAATTTGCACCATGGCCTCGGTGGTG ACAGCCGCACACCGCGCGATAGTCGCCTCTGTCGTTTCCACAGCACTCGC GTCAAAACTTTGGTCGCCTTCAGCACACCGTCTTGCAACTGCCGCATACT TACGATCAGTTCGCAGGTGCGCCGCGCTCCGCTCCACTAGCCTCGCTTCC AGCGCACAATCGATCTCGTGTGAGGCGTTTCCAAAGAAAGGGCGACAGTT TTCGTGGCGATGGCACAAAAATATCAAGCACCCGCCGCAGCTCGACGCGC AGATGGCCCTTGAGATTGTAACCATATTCCAGAGGCATGCTGAAGTTTAT TGGCGACGCACGTTCAAGCCGAGGTGCAATCCGTTCGGGATATATGTTGG ATGGTGATGAAGTGTGTTTGGGCTGACATTAGCAGACGCATTAGGCGTGC ATGCGGCTGCTAGGAAGGATTACTCGAAGGAGGTTTAGCCTTTGTTGTAA ACCTTCCCCGAGCGCGCACGTCGCGCCCCCGATCCCCTTCAAGTTATATC CTCCCCAGAAGTTCCGTCTCTATCCTCGCCGAGGTTCTTTGATATATTTT ATCTGACTTGTCCACTCCTACGTTACCCCTAAATGTCGACCGCTGCCAAC TGACAATTCCACCACGAAGCTAATACCGTATGAAAAGGATGCACACGGTC TTTTAATCGCATGCACGATACGCAACTCATGAACCCGAACACAACTGCCT GGCGTATCTTGGCGTCGGTATCCACCACTTCCGTGCATCACACCACGTGG CAAGCATGTATGTTAATCGCAGGGGCTCACAGCCGAAACCTTCTACCATA AGACGCACAGCTCATGATACGCTCGTCTTAACCCTGCCGCTTCTCTTTCG TTCCTTGCTCGTTGAATCCACCTTTTGGCCTAAACGCAATTGCCTCCCCC AAGATATCGGGTTTGCGACGAGAGGAAGCAGCCTTCGCAGACCCCTCCCC CAGAAGACGGCAGCTTCCTCGATCACCAGAAAACGCCTCGCGCACCGATG CCACCAACGACGGTTCCACCGCAAGCAGCGGTGAAGATTTCGTTGGCAGC GACCCCGAAGTGGTCAGCCAGGAGGAGGAAAACGATGGCTGGGAGGCTGA GGGTGCCGGGGACGCGGTCCTGCCTGCCGTAGCCGCTGGCAGCAGAAGCA GCGGCGGCGGTGGTGGTGGCGTCAGCCGCGCATCATCAGAGGAAGAGGAC CGCTACGGCCGGGCCTGCGCCGCGCTGCTCAAGTACAGGCGCGTGGCCGG GTTCGTTACTGGGGACCGCAAGGGATCTGTCCCGGAAGCGATCATTGGCT GGCTCGACGCGCGCCTGCTAGACAAGAACGTTGCTTCGCTTTATCGCGCG GGGTTGAGACCGGAGCACGCGGTGTCCGTTGTGGAGGCGCTGTTGCGTGA AGGTGCCGGCCGGGCAGTGGACGGCGAGGGGGCGACCTTCGGAGGTCTTG GAGAGGACATGGTGATGGCAATTGTTCTCGGCGAGGCGGCTCCCCGAAAG GATGATGACGGGACGAGCGATGCAGCCGGGGAGGGGGCGGTTCAGGATAG CGCGGCGGTAGAAGAGTTGTCGGTGGCAGCGCCGGCGGGGCCGACGCAGA CTGGGCCTTGGCAGAATTGA
back to top

Coding sequence (CDS) from alignment at S-dermatodea_contig1239:4117..15086-

>mRNA_S-dermatodea_contig1239.1495.1 ID=mRNA_S-dermatodea_contig1239.1495.1|Name=mRNA_S-dermatodea_contig1239.1495.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3744bp|location=Sequence derived from alignment at S-dermatodea_contig1239:4117..15086- (Saccorhiza dermatodea SderLu1190fm monoicous)
GAGCTGCAACCACCACACGGGAAGCGGCGATGTCGCCCAAGCTCGAGACT
TCATCAGGCAATGCCGGGGTTACCCGAGGGGGATGAAGGCATTGCAGGAG
CTGCAACCACCACACGGGAAGCGGCGATGTCGCCCAAGCTCGAGACTTCA
TCAGGCAATGCCGGGGTTACCCGAGGGGGATGAAGGCATTGCAGACCTGG
AGAGCTTGGACAATCCCGCAAAGGACACCAACTACGGTGATGACGGCTCC
CTACAGTACGGCGTCAGCAATGCGGCAGCTGGACCTTCGGATCAGTTCTT
CTCTGCCGACACCCGCGTCGTTTTCGGCGTGAACGCTCTCGAGATCGGGC
TTGTCGAGCTGTTCGACATGGGCCTTAAACGACCTGGAGAGCTTGGACAA
TCCCGCAAAGGACACCAACTACGGTGATGACGGCTCCCTACAGTACGGCG
TCAGCAATGCGGCAGCTGGACCTTCGGATCAGTTCTTCTCTGCCGACACC
CGCGTCGTTTTCGGCGTGAACGCTCTCGAGATCGGGCTTGTCGAGCTGTT
CGACATGGGCCTTAAACGGGCGCTCATCGTGACGGGATGGAACCAGGCGC
GCGCCGATCCAATTGTTTGGGAGCTACTGCCGAGAGGGTTCGAGCTCGCT
TGGCACTCGGTGTCGACCGAGCCGTCCCTCACCGACGTCGCGAAAGGGCG
CTCATCGTGACGGGATGGAACCAGGCGCGCGCCGATCCAATTGTTTGGGA
GCTACTGCCGAGAGGGTTCGAGCTCGCTTGGCACTCGGTGTCGACCGAGC
CGTCCCTCACCGACGTCGCGAAAGGCGTCTCGCTGGCATTGGACCACCGG
GCGGACTGCGTGCTGGCGATGGGGGGGGGAGCGGTGATCGATGCCGCCAA
GGCCATCGCGGCCATCGCCTATGCAGACAAAGACCCCAATAAGGCAGCCA
AGCGTCTGCTAGCAGCTGCCAGCCAGCCGAGGTGTGCCACGTGTTGGCGT
CTCGCTGGCATTGGACCACCGGGCGGACTGCGTGCTGGCGATGGGGGGGG
GAGCGGTGATCGATGCCGCCAAGGCCATCGCGGCCATCGCCTATGCAGAC
AAAGACCCCAATAAGGCAGCCAAGCGTCTGCTAGCAGCTGCCAGCCAGCC
GAGGTGTGCCACGTGTTGGGACACCGTGCCAGATGCCGGAGCAGCGGAGG
ACGACGACCTGGCTCCCCTTTTGGGGCCCATCCCCCTTGTTGCTATCCCC
ATAATTGCCGGAGTGGGGGCAGAGGTCACTCCGATGGCGACTATCCTCGA
CGATGACGACCCTCTGGAACCTGAGAAGGGACACCGTGCCAGATGCCGGA
GCAGCGGAGGACGACGACCTGGCTCCCCTTTTGGGGCCCATCCCCCTTGT
TGCTATCCCCATAATTGCCGGAGTGGGGGCAGAGGTCACTCCGATGGCGA
CTATCCTCGACGATGACGACCCTCTGGAACCTGAGAAGGTTACGGTGGGT
TTCCACAACAGCGCGGCGGCGATGCCCGCCCCGTTCATGGCCATCGTCGA
GCCCCGGCTGATGATGAGGGTGCCCCTGGAGACGACGTGGTCCAGGGCGT
TCGTGGCGCTCGCGGGGTGCATCGAGGGCTATGTGGCCGGCAGAGGATTC
GTGCCTGACTTGCTGAGGTTACGGTGGGTTTCCACAACAGCGCGGCGGCG
ATGCCCGCCCCGTTCATGGCCATCGTCGAGCCCCGGCTGATGATGAGGGT
GCCCCTGGAGACGACGTGGTCCAGGGCGTTCGTGGCGCTCGCGGGGTGCA
TCGAGGGCTATGTGGCCGGCAGAGGATTCGTGCCTGACTTGCTGAGCCAT
CAGGGCATCGAGAGGGTGTCGAGGTGTTTATCGAGAGAACTGGGGTTCCG
CGGGCCTCTGTACGAAGAACGCGAAGACATCGCCTTCGCAGCCATCAGGG
CATCGAGAGGGTGTCGAGGTGTTTATCGAGAGAACTGGGGTTCCGCGGGC
CTCTGTACGAAGAACGCGAAGACATCGCCTTCGCAGGCGTTATTCGAGGC
TTGGTGGCGTCTCGTAACGAGTGGAGTTTCCTTCACCAGCTGGCGTCGGC
CGTGGCAGTCGCCTCCGGTGCCCCCTACGCGGAGTGCGTCTCTCGCCTTT
TCCCAAGGGTTCTAGAAGCACAGGCGTTATTCGAGGCTTGGTGGCGTCTC
GTAACGAGTGGAGTTTCCTTCACCAGCTGGCGTCGGCCGTGGCAGTCGCC
TCCGGTGCCCCCTACGCGGAGTGCGTCTCTCGCCTTTTCCCAAGGGTTCT
AGAAGCACAGATATCGGGTTTGCGACGAGAGGAAGCAGCCTTCGCAGACC
CCTCCCCCAGAAGACGGCAGCTTCCTCGATCACCAGAAAACGCCTCGCGC
ACCGATGCCACCAACGACGGTTCCACCGCAAGCAGCGGTGAAGATTTCGT
TGGCAGCGACCCCGAAGTGGTCAGCCAGGAGGAGGAAAACGATGGCTGGG
AGGCTGAGGGTGCCGGGGACGCGGTCCTGCCTGCCGTAGCCGCTGGCAGC
AGAAGCAGCGGCGGCGGTGGTGGTGGCGTCAGCCGCGCATCATCAGAGGA
AGAGGACCGCTACGGCCGGGCCTGCGCCGCGCTGCTCAAGTACAGGCGCG
TGGCCGGGTTCGTTACTGGGGACCGCAAGGGATCTGTCCCGGAAGCGATC
ATTGGCTGGCTCGACGCGCGCCTGCTAGACAAGAACGTTGCTTCGCTTTA
TCGCGCGGGGTTGAGACCGGAGCACGCGGTGTCCGTTGTGGAGGCGCTGT
TGCGTGAAGGTGCCGGCCGGGCAGTGGACGGCGAGGGGGCGACCTTCGGA
GGTCTTGGAGAGGACATGGTGATGGCAATTGTTCTCGGCGAGGCGGCTCC
CCGAAAGGATGATGACGGGACGAGCGATGCAGCCGGGGAGGGGGCGGTTC
AGGATAGCGCGGCGGTAGAAGAGTTGTCGGTGGCAGCGCCGGCGGGGCCG
ACGCAGACTGGGCCTTGGCAGAATTGAATATCGGGTTTGCGACGAGAGGA
AGCAGCCTTCGCAGACCCCTCCCCCAGAAGACGGCAGCTTCCTCGATCAC
CAGAAAACGCCTCGCGCACCGATGCCACCAACGACGGTTCCACCGCAAGC
AGCGGTGAAGATTTCGTTGGCAGCGACCCCGAAGTGGTCAGCCAGGAGGA
GGAAAACGATGGCTGGGAGGCTGAGGGTGCCGGGGACGCGGTCCTGCCTG
CCGTAGCCGCTGGCAGCAGAAGCAGCGGCGGCGGTGGTGGTGGCGTCAGC
CGCGCATCATCAGAGGAAGAGGACCGCTACGGCCGGGCCTGCGCCGCGCT
GCTCAAGTACAGGCGCGTGGCCGGGTTCGTTACTGGGGACCGCAAGGGAT
CTGTCCCGGAAGCGATCATTGGCTGGCTCGACGCGCGCCTGCTAGACAAG
AACGTTGCTTCGCTTTATCGCGCGGGGTTGAGACCGGAGCACGCGGTGTC
CGTTGTGGAGGCGCTGTTGCGTGAAGGTGCCGGCCGGGCAGTGGACGGCG
AGGGGGCGACCTTCGGAGGTCTTGGAGAGGACATGGTGATGGCAATTGTT
CTCGGCGAGGCGGCTCCCCGAAAGGATGATGACGGGACGAGCGATGCAGC
CGGGGAGGGGGCGGTTCAGGATAGCGCGGCGGTAGAAGAGTTGTCGGTGG
CAGCGCCGGCGGGGCCGACGCAGACTGGGCCTTGGCAGAATTGA
back to top