mRNA_S-dermatodea_contig12297.1439.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_S-dermatodea_contig12297.1439.1
Unique Name	mRNA_S-dermatodea_contig12297.1439.1
Type	mRNA
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)

Homology

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BLAST of mRNA_S-dermatodea_contig12297.1439.1 vs. uniprot
Match: D8LRX1_ECTSI (Vps8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRX1_ECTSI)

HSP 1 Score: 224 bits (571), Expect = 1.530e-66
Identity = 236/398 (59.30%), Postives = 243/398 (61.06%), Query Frame = 1

Query:    1 MGGVLDALLQRTLSSMAGYVPLPVIVKKVVNDHAASSLGEFRHVILAMLDTYSYDTAIHRTAASLLFESLRNVVRERHTLKGAGVRVSAVAGLELPSPS-GKAQSPTPHSGGGAPVPSGRRSTASSDLDAGRTFSRSF------------SSLPXXXXXXXELLHAVGSGVISVLPGGVALVEHLGRGVAGAGVSGSEAQEDGSGLGYDVGXXXXXXXXXXXXXXXXXXXXXXXXPQEASASLWRLRAARRRRQARGDKMRSLVTWAAGEDAAAWSAGADGTGAQMRGGGXXXRG--GREEATPSGRAKFSGRSGSLGGTG--------RGDVRSGAAPGGXXXXXXXXXXXXXXXXXXXXXXXXXXX----QAAGWGVKLQARA-LAIPASFLPKRT 1110
            MGGVLDALLQRTLSSMAGYVPLP IVKKVV+DHA SSLGEFRHVILAMLDTYSYDTAIHRTAASLLFESLR VVRERHTLKGAGVRVSAV G +L  P    A  PT      A                                    S           LL AVGSGVISV  GGVA+VEHLGRG            E   G      XXXXXXXXXXXXXXXXXXXXXXXX   ASASLWRLRAARRRRQA+GDKMRSL  W+AGED          TG     GG   RG  G       G  K SGR+G  GG           G V     PG XXXXXXXXXXXXXXXXXXXXXXXXXX     QA GWG  LQARA LA+PASFL KRT
Sbjct:    1 MGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLFESLRTVVRERHTLKGAGVRVSAVGGFDLHPPRIAAADGPTRTRNASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLALHHPPVPSGLLGAVGSGVISVSSGGVAVVEHLGRGXXXXXXXXXXNDE---GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASASLWRLRAARRRRQAKGDKMRSLARWSAGED----------TGPTRGDGGDRARGTIGHIPVMNRGGTKVSGRNG--GGVXXXXXXXDENGRVHQRGGPGXXXXXXXXXXXXXXXXXXXXXXXXXXXQSRGRQALGWGSALQARAALALPASFLAKRT 383

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BLAST of mRNA_S-dermatodea_contig12297.1439.1 vs. uniprot
Match: A0A6H5JMF4_9PHAE (Vps8 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMF4_9PHAE)

HSP 1 Score: 214 bits (545), Expect = 3.700e-58
Identity = 233/414 (56.28%), Postives = 242/414 (58.45%), Query Frame = 1

Query:    1 MGGVLDALLQRTLSSMAGYVPLPVIVKKVVNDHAASSLGEFRHVILAMLDTYSYDTAIHRTAASLLFESLRNVVRERHTLKGAGVRVSAVAGLELPSPSGKA---------------------------QSPTPHSGGGAPVPSGRRSTASSDLDAGRTFSRSFSSLPXXXXXXXELLHAVGSGVISVLPGGVALVEHLGRG-----VAGAGVSGSEAQEDGSGLGYDVGXXXXXXXXXXXXXXXXXXXXXXXXPQEASASLWRLRAARRRRQARGDKMRSLVTWAAGEDAAAWSAGADGTGAQMRGGGXXXRG--GREEATPSGRAKFSGRSGS------LGGTGRGDVRSGAAPGGXXXXXXXXXXXXXXXXXXXXXXXXXXX---QAAGWGVKLQARA-LAIPASFLPKRT 1110
            MGGVLDALLQRTLSSMAGYVPLP IVKKVV+DHA SSLGEFRHVILAMLDTYSYDTAIHRTAASLLFESLR VVRERHTLKGAGVRVSAV G +L  P   A                           +S  PH     PVPSG                               LL A+GSGVI V   GVA+VEHLGRG                            XXXXXXXXXXXXXXXXXXXXXXXX  +ASASLWRLRAARRRRQARGDKMRSL  W+AGED          TG     GG   RG  G       G +K SGRSG       LG    G V        XXXXXXXXXXXXXXXXXXXXXXXXX     Q  GWG  LQARA LA+PASFL KRT
Sbjct: 2239 MGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLFESLRTVVRERHTLKGAGVRVSAVGGFDLHPPRIAAXXXXXXXXXXXXXXXXXXXXXXXXXXXRSLAPHH---PPVPSG-------------------------------LLGALGSGVIRVSSAGVAVVEHLGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASASLWRLRAARRRRQARGDKMRSLARWSAGED----------TGPIRGDGGERARGTIGHIPVMTRGGSKVSGRSGXXXXXXXLGRDENGRVHQRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSRGRQPLGWGSALQARAALALPASFLTKRT 2608

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BLAST of mRNA_S-dermatodea_contig12297.1439.1 vs. uniprot
Match: A0A7S2GX04_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GX04_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.430e-15
Identity = 41/84 (48.81%), Postives = 60/84 (71.43%), Query Frame = 1

Query:   10 VLDALLQRTLSSMAGYVPLPVIVKKVVNDHAASSLGEFRHVILAMLDTYSYDTAIHRTAASLLFESLRNVVRERHTLKGAGVRV 261
            VL  ++QRTL  M+ +VPLP IV+K+ +DH+   LGE R ++L+MLDTY+Y+T I+RTA SL+   LR + + R  LK +GV +
Sbjct:  426 VLTEMIQRTLDKMSAFVPLPRIVRKITDDHSGMELGELRDILLSMLDTYTYETNIYRTAVSLVATDLRRLCKRRQRLKCSGVSI 509

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BLAST of mRNA_S-dermatodea_contig12297.1439.1 vs. uniprot
Match: UPI0006450216 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006450216)

HSP 1 Score: 62.8 bits (151), Expect = 6.400e-7
Identity = 28/62 (45.16%), Postives = 43/62 (69.35%), Query Frame = 1

Query:   13 LDALLQRTLSSMAGYVPLPVIVKKVVNDHAASSLGEFRHVILAMLDTYSYDTAIHRTAASLL 198
            L+ L+   L+SM GYV LP+I+ K+VNDH     G+F+ +I  MLDT +++T+I  TA +L+
Sbjct: 1391 LNKLVHHILNSMMGYVALPLILTKIVNDHGTDEFGDFKSIITGMLDTCTFETSILNTANALI 1452

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BLAST of mRNA_S-dermatodea_contig12297.1439.1 vs. uniprot
Match: D3AZL5_POLPP (RING zinc finger-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3AZL5_POLPP)

HSP 1 Score: 60.8 bits (146), Expect = 2.610e-6
Identity = 28/72 (38.89%), Postives = 45/72 (62.50%), Query Frame = 1

Query:   13 LDALLQRTLSSMAGYVPLPVIVKKVVNDHAASSLGEFRHVILAMLDTYSYDTAIHRTAASLLFESLRNVVRE 228
            L+ L+   L++M GYV LP+I+ K+VNDH +   G+F+ +I  MLDT +++T+I  TA  L+   +     E
Sbjct: 1325 LNKLVHYILNNMMGYVALPLILTKIVNDHGSDEFGDFKSIISGMLDTCTFETSILNTANQLIQRDMYTTTSE 1396

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BLAST of mRNA_S-dermatodea_contig12297.1439.1 vs. uniprot
Match: A0A7S4HKN1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HKN1_9EUKA)

HSP 1 Score: 57.4 bits (137), Expect = 3.370e-6
Identity = 31/66 (46.97%), Postives = 44/66 (66.67%), Query Frame = 1

Query:   10 VLDALLQRTLSSMAGYVPLPVIVKKVVNDHAASSLGEFRHVILAMLDTYSYDTAIHRTAASLLFES 207
            V +  L + L+SM GYVPL VI++K+V DH+ +   +F+ +ILAMLDT  Y+  I   AA  LF+S
Sbjct:   19 VFNDCLAKILNSMMGYVPLRVIMEKIVRDHSTAPFSDFKPMILAMLDTNHYEQNILE-AAKRLFDS 83

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BLAST of mRNA_S-dermatodea_contig12297.1439.1 vs. uniprot
Match: A0A388JYZ1_CHABU (Vps8 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JYZ1_CHABU)

HSP 1 Score: 60.5 bits (145), Expect = 3.730e-6
Identity = 26/65 (40.00%), Postives = 43/65 (66.15%), Query Frame = 1

Query:    1 MGGVLDALLQRTLSSMAGYVPLPVIVKKVVNDHAASSLGEFRHVILAMLDTYSYDTAIHRTAASL 195
            M  +L  ++ + +S M GYVPLPV++ K+V+ H +   GEF+  IL +L TY ++ +I +TA +L
Sbjct: 2718 MRTLLVGMMGKVMSGMVGYVPLPVLLSKIVSQHGSDQFGEFKATILGLLGTYGFERSILKTAKNL 2782

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BLAST of mRNA_S-dermatodea_contig12297.1439.1 vs. uniprot
Match: Q54EK0_DICDI (RING-type domain-containing protein n=2 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54EK0_DICDI)

HSP 1 Score: 58.5 bits (140), Expect = 1.440e-5
Identity = 26/62 (41.94%), Postives = 43/62 (69.35%), Query Frame = 1

Query:   13 LDALLQRTLSSMAGYVPLPVIVKKVVNDHAASSLGEFRHVILAMLDTYSYDTAIHRTAASLL 198
            L  L+   L+SM GYV LPVI+ ++VN++  + LG+F+ +I  M+DT +++T I +TA  L+
Sbjct: 1486 LSKLVHSILNSMMGYVALPVILSRIVNEYGGNELGDFKSIITDMMDTCTFETIILKTANDLI 1547

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BLAST of mRNA_S-dermatodea_contig12297.1439.1 vs. uniprot
Match: F0ZBS6_DICPU (RING-type domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZBS6_DICPU)

HSP 1 Score: 57.4 bits (137), Expect = 3.340e-5
Identity = 26/71 (36.62%), Postives = 46/71 (64.79%), Query Frame = 1

Query:   13 LDALLQRTLSSMAGYVPLPVIVKKVVNDHAASSLGEFRHVILAMLDTYSYDTAIHRTAASLLFESLRNVVR 225
            L  L+   +++M GYV LPVI+ ++VN++  + LG+F+ +I  MLDT +++T I  TA  L+ + + +  R
Sbjct: 1499 LTKLVHSIINNMMGYVALPVILSRIVNEYGNNDLGDFKQIIQDMLDTCNFETIILETANDLIQQDMYSATR 1569

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BLAST of mRNA_S-dermatodea_contig12297.1439.1 vs. uniprot
Match: UPI000A2A6FFC (vacuolar protein sorting-associated protein 8 homolog n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A6FFC)

HSP 1 Score: 55.8 bits (133), Expect = 9.980e-5
Identity = 29/77 (37.66%), Postives = 49/77 (63.64%), Query Frame = 1

Query:   13 LDALLQRTLSSMAGYVPLPVIVKKVVNDHAASS--LGEFRHVILAMLDTYSYDTAIHRTAASLL----FESLRNVVR 225
            L  L +  ++SM GY+ LP I++K++ D   SS   GE + +IL MLDTY+Y++ + +T  SLL    + S+ +++R
Sbjct: 1164 LKDLTRHVMNSMMGYISLPAILQKIMQDPTYSSGKFGEIKELILGMLDTYTYESTLLKTTNSLLENDLYXSMNHLIR 1240

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig12297.1439.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig12297.1439.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10


Match Name	E-value	Identity	Description
D8LRX1_ECTSI	1.530e-66	59.30	Vps8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 Rep...	[more]
A0A6H5JMF4_9PHAE	3.700e-58	56.28	Vps8 domain-containing protein n=1 Tax=Ectocarpus ...	[more]
A0A7S2GX04_9STRA	1.430e-15	48.81	Hypothetical protein n=2 Tax=Dictyocha speculum Ta...	[more]
UPI0006450216	6.400e-7	45.16	hypothetical protein n=1 Tax=Acytostelium subglobo...	[more]
D3AZL5_POLPP	2.610e-6	38.89	RING zinc finger-containing protein n=1 Tax=Polysp...	[more]
A0A7S4HKN1_9EUKA	3.370e-6	46.97	Hypothetical protein (Fragment) n=1 Tax=Vannella s...	[more]
A0A388JYZ1_CHABU	3.730e-6	40.00	Vps8 domain-containing protein n=1 Tax=Chara braun...	[more]
Q54EK0_DICDI	1.440e-5	41.94	RING-type domain-containing protein n=2 Tax=Dictyo...	[more]
F0ZBS6_DICPU	3.340e-5	36.62	RING-type domain-containing protein n=1 Tax=Dictyo...	[more]
UPI000A2A6FFC	9.980e-5	37.66	vacuolar protein sorting-associated protein 8 homo...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig12297	contig	S-dermatodea_contig12297:1971..4622 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Vps8
Ec32 ortholog	Ec-08_002750.1
Exons	3
Model size	1113
Cds size	1113
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig12297.1439.1	prot_S-dermatodea_contig12297.1439.1	Saccorhiza dermatodea SderLu1190fm monoicous	polypeptide	S-dermatodea_contig12297 1971..4622 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622924241.7171872-CDS-S-dermatodea_contig12297:1970..2904	1622924241.7171872-CDS-S-dermatodea_contig12297:1970..2904	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig12297 1971..2904 -
1694079118.63418-CDS-S-dermatodea_contig12297:1970..2904	1694079118.63418-CDS-S-dermatodea_contig12297:1970..2904	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig12297 1971..2904 -
1622924241.7261748-CDS-S-dermatodea_contig12297:3747..3874	1622924241.7261748-CDS-S-dermatodea_contig12297:3747..3874	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig12297 3748..3874 -
1694079118.64398-CDS-S-dermatodea_contig12297:3747..3874	1694079118.64398-CDS-S-dermatodea_contig12297:3747..3874	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig12297 3748..3874 -
1622924241.734408-CDS-S-dermatodea_contig12297:4570..4622	1622924241.734408-CDS-S-dermatodea_contig12297:4570..4622	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig12297 4571..4622 -
1694079118.6536498-CDS-S-dermatodea_contig12297:4570..4622	1694079118.6536498-CDS-S-dermatodea_contig12297:4570..4622	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig12297 4571..4622 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at S-dermatodea_contig12297:1971..4622-
coding sequence from alignment at S-dermatodea_contig12297:1971..4622-

protein sequence of mRNA_S-dermatodea_contig12297.1439.1

>prot_S-dermatodea_contig12297.1439.1 ID=prot_S-dermatodea_contig12297.1439.1|Name=mRNA_S-dermatodea_contig12297.1439.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=371bp
MGGVLDALLQRTLSSMAGYVPLPVIVKKVVNDHAASSLGEFRHVILAMLD
TYSYDTAIHRTAASLLFESLRNVVRERHTLKGAGVRVSAVAGLELPSPSG
KAQSPTPHSGGGAPVPSGRRSTASSDLDAGRTFSRSFSSLPPPPPPPPEL
LHAVGSGVISVLPGGVALVEHLGRGVAGAGVSGSEAQEDGSGLGYDVGGG
GGGGGGGGVASGSTAGGGRGSSPQEASASLWRLRAARRRRQARGDKMRSL
VTWAAGEDAAAWSAGADGTGAQMRGGGGGGRGGREEATPSGRAKFSGRSG
SLGGTGRGDVRSGAAPGGRTGAEVGARAGARTGAAAGADAGVEQGQAAGW
GVKLQARALAIPASFLPKRT*

mRNA from alignment at S-dermatodea_contig12297:1971..4622-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_S-dermatodea_contig12297.1439.1 ID=mRNA_S-dermatodea_contig12297.1439.1|Name=mRNA_S-dermatodea_contig12297.1439.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2652bp|location=Sequence derived from alignment at S-dermatodea_contig12297:1971..4622- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGGGGGTGTGCTGGATGCCTTGCTGCAGCGCACGCTGAGCAGCATGGC
CGGTGGGTGGTGTTGGTGGTTCGTTGGCTGGGATTGGTCGATCGATTGAT
TGGTTGATTGATCGATTATCACAAGGCGGTATTGAGTCTTGGGGGGTTGG
AGGGTGTCGACTCTGGTTTTGGTATTCGTTTTGTGTCACGGTGAGAGTGC
GGGTGTGTGATTGATGGGTGGGGTGTGAGCGTTCTTCAATTTTGTTTTTC
CCGGGCTCGTGAAGAAATTAATGCACGAGGCGAGGAGATGTGCGTTTGTG
TACTCGCTCTCGTTTTCGAGAGCTGATCGCGGTGCAGCCCCCCCCCCCCT
CCCTCCGCCGTAATGCGGGTATGCATAAAACGCTAAGTAGGCCTACCAGA
CGCCACACCCTCACATCAATCGATATTTTGCTTCGACTGCAGGAAACCGA
ACGCGTATCACAAGCAGGGAATTTTGCACACGCTTAACGATTTTCCCCCG
GCCCTCCAGCGAACCCAACCCCGGCACCGCCCCCCTCGACACCGCTCAAC
AGCGAGGCGTTAGAAAAATGATTCCAAAGACGTCAGTGAGCGTTGAGGTC
CACCTTTTCAAAGAAAAAGGGAAGATGGTCCAAGCTACACCTATGGAGGC
TCACCTGTTGCGTATGATGCTATCATTTCATGTCATGTCATGTATGATGG
TATACGGTTATGTTACATGCCCCCCCCCCCCCGCCCCCCCTGCCTCAGGC
TACGTGCCGCTCCCGGTGATCGTGAAGAAGGTCGTGAACGACCACGCCGC
CAGCAGTTTGGGAGAGTTCCGGCACGTCATCCTTGCGATGCTCGACACCT
ACTCGTACGACACCGCGATTCACAGGTGAGCGGGGACGGGTTTGCGTGAG
GGGGTAGAAGGTCAACCCTTTCGGGAAATATTTGCTTCCGTTTTCCGCCG
AAAATTGGTTCCGGGTATGGTGGGTGACGGCTAAAGACACCGTCGAACAC
GTCGAGCATGGTGGCGAGCTAAGCGCGCAAAAGGCAGGGTGCCGCGTTTC
TGCCGCCACCATGCTTACGGCGAAGATAAGAGAACCCGCGCGCTGTGCGT
GTCGCTGTTCGATACAAAGCACGGCGCGGGGAAACGGCCCAACGAAAACG
GATTCAGTCCGCCGGGCCGAGTGGTGGTGTTTCGGTTGGAGTGAACGGCC
GTGTTTTGCAAGGGCGGGGGGACGCGCAAGCGTTGACCTCGTGGCGCGAG
TAACAGGAACGCGCTGTACAGGAAAATGAACGGGCCCCTGTTCTTGAGTA
CAACGCCGCTACGGTATGCCCCCCCTCCCCTGAAACCCCCCTAGCCCCCC
TCCGCCCCCACCGTAACTTTCGTTGAACCGGGTGAGATGCTGGTGTTTGT
ATGATACCCTGTTTGGTTCGAAGCGATTTATCCTCCTCCAGGGTACATAC
ACTCCACGGGAAGGTCTACGACCAAGCGACCGGTAGAAATCACCGCTTCA
GTACCGTAGGCTGTTTCATCAGATGCTTTGGCCTGACCGCGACACCCAGT
CACACACTACGGCAGCATCATCGGCAGCAGGATAAGATACCTCCCGACCC
ACCACGGCCTTCTTCTTCTTCCGCCTTTACCCTAACTCCCACCCCACGCT
AACTCAACTTCCCGTTCGTCGCACCGTTCCCTCTACCTCTCTACGAAAAC
CTCCGCTATACTCCTCAGAACCGCGGCCTCGCTGCTATTCGAAAGCCTGC
GAAACGTCGTCCGCGAACGCCACACCCTCAAAGGCGCCGGAGTCCGAGTC
TCCGCCGTCGCAGGGCTCGAGCTCCCCTCGCCCAGCGGCAAGGCACAATC
CCCGACGCCACACTCCGGCGGTGGCGCCCCCGTGCCATCAGGTAGAAGGA
GCACCGCGTCCTCGGACCTCGACGCTGGCCGAACGTTCTCGCGGTCATTT
TCGTCGTTGCCCCCGCCACCACCACCGCCCCCGGAGTTGCTCCACGCTGT
CGGGTCCGGGGTGATCAGCGTGTTGCCCGGGGGAGTGGCCTTGGTCGAGC
ACTTGGGGCGAGGCGTTGCCGGCGCCGGTGTGAGTGGGAGCGAGGCTCAG
GAAGACGGATCCGGTCTCGGCTACGATGTAGGCGGCGGTGGCGGCGGCGG
CGGCGGCGGCGGCGTTGCCTCGGGGTCGACGGCTGGTGGAGGGCGAGGCT
CGTCCCCGCAAGAGGCCTCGGCCTCGCTGTGGAGGCTGAGGGCCGCCCGG
AGACGCCGGCAGGCGAGGGGCGACAAGATGCGCTCGCTGGTTACGTGGGC
GGCGGGAGAGGACGCGGCCGCTTGGAGCGCCGGGGCGGACGGCACCGGGG
CTCAGATGCGCGGCGGTGGCGGCGGGGGGCGCGGGGGTAGAGAAGAAGCG
ACCCCTTCCGGCCGAGCTAAATTCTCCGGTCGCAGTGGCTCTTTAGGTGG
CACCGGTCGAGGGGATGTGAGGTCGGGGGCCGCGCCGGGCGGCAGGACTG
GGGCTGAAGTGGGGGCGCGGGCGGGGGCGCGGACGGGGGCTGCGGCTGGG
GCGGATGCTGGCGTAGAGCAAGGGCAGGCAGCTGGTTGGGGGGTGAAGCT
ACAGGCGCGAGCGCTTGCGATTCCTGCGAGTTTCTTGCCCAAGCGAACTT
GA

Coding sequence (CDS) from alignment at S-dermatodea_contig12297:1971..4622-

>mRNA_S-dermatodea_contig12297.1439.1 ID=mRNA_S-dermatodea_contig12297.1439.1|Name=mRNA_S-dermatodea_contig12297.1439.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2226bp|location=Sequence derived from alignment at S-dermatodea_contig12297:1971..4622- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGGGGGTGTGCTGGATGCCTTGCTGCAGCGCACGCTGAGCAGCATGGC
CGATGGGGGGTGTGCTGGATGCCTTGCTGCAGCGCACGCTGAGCAGCATG
GCCGGCTACGTGCCGCTCCCGGTGATCGTGAAGAAGGTCGTGAACGACCA
CGCCGCCAGCAGTTTGGGAGAGTTCCGGCACGTCATCCTTGCGATGCTCG
ACACCTACTCGTACGACACCGCGATTCACAGGCTACGTGCCGCTCCCGGT
GATCGTGAAGAAGGTCGTGAACGACCACGCCGCCAGCAGTTTGGGAGAGT
TCCGGCACGTCATCCTTGCGATGCTCGACACCTACTCGTACGACACCGCG
ATTCACAGAACCGCGGCCTCGCTGCTATTCGAAAGCCTGCGAAACGTCGT
CCGCGAACGCCACACCCTCAAAGGCGCCGGAGTCCGAGTCTCCGCCGTCG
CAGGGCTCGAGCTCCCCTCGCCCAGCGGCAAGGCACAATCCCCGACGCCA
CACTCCGGCGGTGGCGCCCCCGTGCCATCAGGTAGAAGGAGCACCGCGTC
CTCGGACCTCGACGCTGGCCGAACGTTCTCGCGGTCATTTTCGTCGTTGC
CCCCGCCACCACCACCGCCCCCGGAGTTGCTCCACGCTGTCGGGTCCGGG
GTGATCAGCGTGTTGCCCGGGGGAGTGGCCTTGGTCGAGCACTTGGGGCG
AGGCGTTGCCGGCGCCGGTGTGAGTGGGAGCGAGGCTCAGGAAGACGGAT
CCGGTCTCGGCTACGATGTAGGCGGCGGTGGCGGCGGCGGCGGCGGCGGC
GGCGTTGCCTCGGGGTCGACGGCTGGTGGAGGGCGAGGCTCGTCCCCGCA
AGAGGCCTCGGCCTCGCTGTGGAGGCTGAGGGCCGCCCGGAGACGCCGGC
AGGCGAGGGGCGACAAGATGCGCTCGCTGGTTACGTGGGCGGCGGGAGAG
GACGCGGCCGCTTGGAGCGCCGGGGCGGACGGCACCGGGGCTCAGATGCG
CGGCGGTGGCGGCGGGGGGCGCGGGGGTAGAGAAGAAGCGACCCCTTCCG
GCCGAGCTAAATTCTCCGGTCGCAGTGGCTCTTTAGGTGGCACCGGTCGA
GGGGATGTGAGGTCGGGGGCCGCGCCGGGCGGCAGGACTGGGGCTGAAGT
GGGGGCGCGGGCGGGGGCGCGGACGGGGGCTGCGGCTGGGGCGGATGCTG
GCGTAGAGCAAGGGCAGGCAGCTGGTTGGGGGGTGAAGCTACAGGCGCGA
GCGCTTGCGATTCCTGCGAGTTTCTTGCCCAAGCGAACTTGAAACCGCGG
CCTCGCTGCTATTCGAAAGCCTGCGAAACGTCGTCCGCGAACGCCACACC
CTCAAAGGCGCCGGAGTCCGAGTCTCCGCCGTCGCAGGGCTCGAGCTCCC
CTCGCCCAGCGGCAAGGCACAATCCCCGACGCCACACTCCGGCGGTGGCG
CCCCCGTGCCATCAGGTAGAAGGAGCACCGCGTCCTCGGACCTCGACGCT
GGCCGAACGTTCTCGCGGTCATTTTCGTCGTTGCCCCCGCCACCACCACC
GCCCCCGGAGTTGCTCCACGCTGTCGGGTCCGGGGTGATCAGCGTGTTGC
CCGGGGGAGTGGCCTTGGTCGAGCACTTGGGGCGAGGCGTTGCCGGCGCC
GGTGTGAGTGGGAGCGAGGCTCAGGAAGACGGATCCGGTCTCGGCTACGA
TGTAGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGGCGTTGCCTCGGGGT
CGACGGCTGGTGGAGGGCGAGGCTCGTCCCCGCAAGAGGCCTCGGCCTCG
CTGTGGAGGCTGAGGGCCGCCCGGAGACGCCGGCAGGCGAGGGGCGACAA
GATGCGCTCGCTGGTTACGTGGGCGGCGGGAGAGGACGCGGCCGCTTGGA
GCGCCGGGGCGGACGGCACCGGGGCTCAGATGCGCGGCGGTGGCGGCGGG
GGGCGCGGGGGTAGAGAAGAAGCGACCCCTTCCGGCCGAGCTAAATTCTC
CGGTCGCAGTGGCTCTTTAGGTGGCACCGGTCGAGGGGATGTGAGGTCGG
GGGCCGCGCCGGGCGGCAGGACTGGGGCTGAAGTGGGGGCGCGGGCGGGG
GCGCGGACGGGGGCTGCGGCTGGGGCGGATGCTGGCGTAGAGCAAGGGCA
GGCAGCTGGTTGGGGGGTGAAGCTACAGGCGCGAGCGCTTGCGATTCCTG
CGAGTTTCTTGCCCAAGCGAACTTGA