mRNA_S-dermatodea_contig12285.1431.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig12285.1431.1 vs. uniprot
Match: D8LEZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEZ4_ECTSI) HSP 1 Score: 857 bits (2215), Expect = 4.760e-293 Identity = 509/672 (75.74%), Postives = 545/672 (81.10%), Query Frame = 1
Query: 1 VVSRHDGEGQRKLRSRGGG--DGKRTIFDARPYVKLLETIDGTTPRDERGDLLVFLSGMGDMLAVTEGVREYVEGKSPRRWVVLMLHSSLSVEEQDK-------VFDAAPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPMSGVRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYSRSTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLVDPRLFPYLSPPPPENLEAALEALALLGATDVAAS----GFCGSDDTITDTDPGETLPETRRDPGNGRSSDEIPGAPSAQQPDLSPP--LPPLSRGEQGGPLSPAVAFDDATARAPLTPLGRVLSSLPVEPSVGKMLALASLFGEVEHVLTLAAALSTQTPFDARAAASASGANPVAEFASPDGDPFTVMNAYDEWIRVKAARQESSRRWCKRHGLQEQRLYEITKLRKQFEDLLSNTGLLWLGAAAQRARRXXXXXXXXXXXXXXXXXXASKDKIRELKMRRGGRKRKVLEVDHGVAGDGDAEXXXXXXXXXXXEAEDAQKDLRAEVGEGGGDGDVGLDLSSLEFYMAQDVDQLAESSGRRLARRDIAVLKAILCQGLYPHFAVADAGNAGRASNEQQYITRPSAGLFMSPSSVLACQDFGVRAGGGGTAAAPTSRSLRAVPPQM-RGEGTGCF 1968
VVS+HDGEGQRKLRSRGGG +GKR +FDARPYVKLLE+ID TTPRDERGDLLVFLSGM DMLAVTEGVREYVE KSPRRWVVLMLHSSLSVEEQDK VFDA+PLGTRKMILATNIAETSVTIDGVRFV DSGKAKEMSWDP SGVRSLQEFWVSRASAEQRKGRAGRTGPG+CFRLY+RSTFDRL PFAEPEIRRCPLEGLVLQMKSLGL DPR FPYLSPPPPENL AALE+LALLGATD A++ + E DP G GAP A++ +P P R E + FDDATARAPLTPLGRVLS+LPV+PSVGKMLAL +LFGE EHVLTLAAALSTQTPFDARAAA+ASGANPVAEFAS GDPFTVMNAYDEWIRVKAAR+ESSRRWCKRHGLQEQRLYEITKLR+QFEDLL + GL+WLGAAAQRAR XXXXXXXXXXXXXXXXXX GRKRKVL+VD G GDA XXXXXXXXXXX+ E+A++DLR EVGEG DG+ GLDLSSLEFYMAQDVDQLAESSGRRLARRD+A++KAILCQGLYP FAVADAGNAGRASNEQQY+TRPS GLFMSPSSVLACQDFG+ A GGTA S S R RG+G C+
Sbjct: 561 VVSKHDGEGQRKLRSRGGGGGEGKRVMFDARPYVKLLESIDTTTPRDERGDLLVFLSGMSDMLAVTEGVREYVEAKSPRRWVVLMLHSSLSVEEQDKARDFLGLVFDASPLGTRKMILATNIAETSVTIDGVRFVCDSGKAKEMSWDPASGVRSLQEFWVSRASAEQRKGRAGRTGPGVCFRLYARSTFDRLPPFAEPEIRRCPLEGLVLQMKSLGLDDPRYFPYLSPPPPENLRAALESLALLGATDAASAVSVPAAAADEAAXXXXXXTEGAVAVGSDPRGGAGL----GAPHAERLPAAPESNAEPRRREEGTTATTTPPTFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAAAASGANPVAEFASSHGDPFTVMNAYDEWIRVKAARKESSRRWCKRHGLQEQRLYEITKLRRQFEDLLGSAGLIWLGAAAQRARXXXXXXXXXXXXXXXXXXXXXXXXXX-------GRKRKVLQVDGG----GDAAXXXXXXXXXXXDVEEARRDLRGEVGEGEVDGEAGLDLSSLEFYMAQDVDQLAESSGRRLARRDVAIIKAILCQGLYPQFAVADAGNAGRASNEQQYVTRPSGGLFMSPSSVLACQDFGIAATAGGTANGIHSSSSRGAAANAGRGDGLLCY 1217
BLAST of mRNA_S-dermatodea_contig12285.1431.1 vs. uniprot
Match: A0A6H5K4A6_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A6_9PHAE) HSP 1 Score: 403 bits (1036), Expect = 6.230e-125 Identity = 241/396 (60.86%), Postives = 263/396 (66.41%), Query Frame = 1
Query: 1 VVSRHDGEGQRKLRSRGGG--DGKRTIFDARPYVKLLETIDGTTPRDERGDLLVFLSGMGDMLAVTEGVREYVEGKSPRRWVVLMLHSSLSVEEQDKVFDAAPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPMSGVRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYSRSTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLVDPRLFPYLSPPPPENLEAALEALALLGATDVAAS----GFCGSDDTITDTDPGETLPETRRDPGNGRSSDEIPGAPSAQQPDLSPPLPPLSRGEQGGPLSPAVA---FDDATARAPLTPLGRVLSSLPVEPSVGKMLALASLFGEVEHVLTLAAALSTQTPFDARAAASASGANPVAEFASPDGD 1161
VVSRHDGEGQRKLRSRGGG +GKR +FDARP+VKLLE+ID TTPRDERGDLLVFLSGM DMLAVTEGVREYVE KSPRRWVVLMLHSSLSVEEQDK D L RKGRAGRTGPG+CFRLY+RSTFDRL PFAEPEIRRCPLEGLVLQMKSLGL DPR FPYLSPPPPENL AAL +LALLGATD A++ E + E G+ GAP A++ +P R + G + + FDDATARAPLTPLGRVLS LPV+PSVGKMLAL +LFGE EHVLTLAAALSTQTPFD RAA++ASGANPVAEFASP G+
Sbjct: 596 VVSRHDGEGQRKLRSRGGGGGEGKRVMFDARPFVKLLESIDTTTPRDERGDLLVFLSGMSDMLAVTEGVREYVEAKSPRRWVVLMLHSSLSVEEQDKARDFLGL--------------------------------------------------------RKGRAGRTGPGVCFRLYARSTFDRLPPFAEPEIRRCPLEGLVLQMKSLGLDDPRFFPYLSPPPPENLRAALGSLALLGATDPASAVSVPAAAADXXXXXXXXXXEAITEGAVAAGSDLRGGAGLGAPHAERLPAAPESNAEPRRREQGTTAATITPPTFDDATARAPLTPLGRVLSKLPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDTRAASAASGANPVAEFASPHGE 935
BLAST of mRNA_S-dermatodea_contig12285.1431.1 vs. uniprot
Match: A0A7K7LCV4_9AVES (DHX34 helicase (Fragment) n=3 Tax=Anatinae TaxID=2068716 RepID=A0A7K7LCV4_9AVES) HSP 1 Score: 394 bits (1011), Expect = 6.160e-123 Identity = 247/600 (41.17%), Postives = 321/600 (53.50%), Query Frame = 1
Query: 61 GKRTIFDARPYVKLLETIDGTTPRDERGDLLVFLSGMGDMLAVTEGVREYVEGKSPRRWVVLMLHSSLSVEEQDKVFDAAPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPMSGVRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYSRSTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLVDPRLFPYLSPPPPENLEAALEALALLGATDVAASGFCGSDDTITDTDPGETLPETRRDPGNGRSSDEIPGAPSAQQPDLSPPLPPLSRGEQGGPLSPAVAFDDATARAPLTPLGRVLSSLPVEPSVGKMLALASLFGEVEHVLTLAAALSTQTPFDARAAASASGANPVAEFASPDGDPFTVMNAYDEWIRVKAARQESSRRWCKRHGLQEQRLYEITKLRKQFEDLLSNTGLLWLGAAAQRARRXXXXXXXXXXXXXXXXXXASKDKIRELKMRRGGRKRKVLEVDHGVAGDGDAEXXXXXXXXXXXEAEDAQKDLRAEVGEGGGD-GDVGLDLSSLEFYMAQDVDQLAESSGRRLARRDIAVLKAILCQGLYPHFAVADAGNAGRASNEQQYITRPSAGLFMSPSSVLA 1857
GK D RPY+++L+ ID P +ERGDLLVFLSG+ ++ AV E + Y +RW+VL LHS+LSV EQDKVFD P G RK ILATNIAETSVTIDGVRFV DSGK KEMS+DP ++ LQEFW+SRASAEQRKGRAGRTGPG+C+RLY+ S +D P+ PEI+R L+ LVLQ+KS+GL DPR FP+L PPP +LE A+ L GA D A LTP+G +L+ LPV+ VGKML L +LFG E LT+AAALS Q+PF + A+ A SP GDP T++NA++EW++VK+ R SSR+WC+R GL+E RLYE LR+QF++LL + LL AA R + + GRKRKVL + G AG E E G G + G+ +D+ ++F + D+D+L SG L+ +A+LK +LC+GLYP AV DA N R ++Q + T+ G+ + PS V A
Sbjct: 16 GKPERLDPRPYLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVQEAAQVYAT--QTQRWIVLPLHSTLSVSEQDKVFDVPPPGVRKCILATNIAETSVTIDGVRFVLDSGKVKEMSYDPQGKLQRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFPPYPVPEIQRVALDALVLQVKSMGLGDPRTFPFLEPPPSASLETAVRYLREQGALDEAEE---------------------------------------------------------------------------LTPIGTLLAQLPVDVVVGKMLVLGALFGLAEPTLTVAAALSVQSPFLRLSNANPDCATARRPLESPHGDPLTLLNAFNEWVQVKSERGGSSRKWCRRRGLEEHRLYEAANLRRQFQELLRDHRLL--EAAPSRPSDSYSRQSRHRERRELHRLWRHHTETQ-------GRKRKVLRLQDGTAGSSGEE----------------------EEGAGAREPGERSVDIQDVKFKLRHDMDELQAVSGSVLSPSQLALLKLVLCRGLYPQLAVPDALNNSRKDSDQIFHTKSKQGVVLHPSCVFA 507
BLAST of mRNA_S-dermatodea_contig12285.1431.1 vs. uniprot
Match: UPI001CAA3BAE (probable ATP-dependent RNA helicase DHX34 isoform X3 n=1 Tax=Chelonia mydas TaxID=8469 RepID=UPI001CAA3BAE) HSP 1 Score: 397 bits (1019), Expect = 1.290e-122 Identity = 241/596 (40.44%), Postives = 321/596 (53.86%), Query Frame = 1
Query: 76 FDARPYVKLLETIDGTTPRDERGDLLVFLSGMGDMLAVTEGVREYVEGKSPRRWVVLMLHSSLSVEEQDKVFDAAPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPMSGVRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYSRSTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLVDPRLFPYLSPPPPENLEAALEALALLGATDVAASGFCGSDDTITDTDPGETLPETRRDPGNGRSSDEIPGAPSAQQPDLSPPLPPLSRGEQGGPLSPAVAFDDATARAPLTPLGRVLSSLPVEPSVGKMLALASLFGEVEHVLTLAAALSTQTPFDARAAASASGANPVAEFASPDGDPFTVMNAYDEWIRVKAARQESSRRWCKRHGLQEQRLYEITKLRKQFEDLLSNTGLLW--LGAAAQRARRXXXXXXXXXXXXXXXXXXASKDKIRELKMRRGGRKRKVLEVDHGVAGDGDAEXXXXXXXXXXXEAEDAQKDLRAEVGEGGGDGDVGLDLSSLEFYMAQDVDQLAESSGRRLARRDIAVLKAILCQGLYPHFAVADAGNAGRASNEQQYITRPSAGLFMSPSSVLA 1857
D RPY+++L+ ID P +ERGDLLVFLSG+ ++ AV E + Y +RWVVL LHS+LS+ EQDKVFD P G RK I++TNIAETSVTIDGVRFV DSGK KE+S+DP + ++ LQEFW+SRASAEQRKGRAGRTGPG+C+RLY+ S +D AP+ PEI+R L+ LVLQMKS+GL DPR FP+L PPP +LE A+ L GA D A S LTP+G +L+ LPV+ +GKML L +LFG E VLT+AAALS Q+PF + A SP GDP T++N ++EW++VK+ R SSR+WC+R GL+E RLYE LR+QF++LL + GLL G AR+ ++R+ GRKRKVL + G AG E G G+D+ ++F + +VD+L +SG L+ +A+LK +LC+GLYP AV D N+ R ++Q + T+ G+ + P+ V A
Sbjct: 370 LDPRPYLRVLQAIDHKYPPEERGDLLVFLSGVAEISAVLEAAQAYAT--HTQRWVVLPLHSTLSIAEQDKVFDMPPPGVRKCIVSTNIAETSVTIDGVRFVLDSGKVKELSYDPQAKLQRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIQRVALDALVLQMKSMGLGDPRTFPFLEPPPQSSLETAVRYLREQGALDRAES---------------------------------------------------------------------------LTPIGSLLAQLPVDVVIGKMLVLGALFGLAEPVLTVAAALSVQSPFLRPTRTNPDCATARRPLESPHGDPLTLLNTFNEWVQVKSERAGSSRKWCRRRGLEEHRLYEAANLRRQFQELLRDHGLLEPVQGPRDSYARQSRHRERRELH------------RLRQRHEETEGRKRKVLRLQEGEAGSSSDEGASRT-------------------------GPSGVDIQDVKFKLRHNVDELQAASGAALSSHQLALLKLVLCRGLYPQLAVPDQYNSCRKDSDQIFHTKNKQGIVLHPTCVFA 851
BLAST of mRNA_S-dermatodea_contig12285.1431.1 vs. uniprot
Match: A0A7K7BJT6_9AVES (DHX34 helicase (Fragment) n=1 Tax=Nothoprocta ornata TaxID=83376 RepID=A0A7K7BJT6_9AVES) HSP 1 Score: 391 bits (1004), Expect = 1.560e-122 Identity = 242/601 (40.27%), Postives = 322/601 (53.58%), Query Frame = 1
Query: 61 GKRTIFDARPYVKLLETIDGTTPRDERGDLLVFLSGMGDMLAVTEGVREYVEGKSPRRWVVLMLHSSLSVEEQDKVFDAAPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPMSGVRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYSRSTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLVDPRLFPYLSPPPPENLEAALEALALLGATDVAASGFCGSDDTITDTDPGETLPETRRDPGNGRSSDEIPGAPSAQQPDLSPPLPPLSRGEQGGPLSPAVAFDDATARAPLTPLGRVLSSLPVEPSVGKMLALASLFGEVEHVLTLAAALSTQTPFDARAAASASGANPVAEFASPDGDPFTVMNAYDEWIRVKAARQESSRRWCKRHGLQEQRLYEITKLRKQFEDLLSNTGLLWLGAAAQRARRXXXXXXXXXXXXXXXXXXASKDKIRELKMRRGGRKRKVLEVDHGVAGDGDAEXXXXXXXXXXXEAEDAQKDLRAEVGEGGGD--GDVGLDLSSLEFYMAQDVDQLAESSGRRLARRDIAVLKAILCQGLYPHFAVADAGNAGRASNEQQYITRPSAGLFMSPSSVLA 1857
GK D RP++++L+ ID P +ERGDLLVFLSG+ ++ AV E + Y +RWVVL LHS+LSV EQDKVFD P G RK IL+TNIAETSVTIDGVRFV DSGK KEMS+DP ++ LQEFW+SRASAEQRKGRAGRTGPG+C+RLY+ S +D +P+ PEI+R L+ LVLQ+KS+GL DPR FP+L PPPP +LE A+ L GA D A LTP+G++L+ LPV+ VGK+L L +L G E LT+AAALS Q+PF A + A SP GDP T++N ++EW++VK+ R +SR+WC+R GL+E RLYE LR+QF++LL + LL AA+ R S + GRKRKVL + G A GG D G+ G+D+ ++F + DV+QL ++G L+ +A+L+ +LC+GLYP A+ D N+GR ++Q + TR GL + P+ V A
Sbjct: 230 GKTERLDPRPFLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVLEAAQPYAA--RTQRWVVLPLHSTLSVAEQDKVFDVPPPGVRKCILSTNIAETSVTIDGVRFVLDSGKVKEMSYDPQGKLQRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFSPYPVPEIQRVALDVLVLQLKSMGLGDPRTFPFLEPPPPSSLETAVRYLREQGALDEAEE---------------------------------------------------------------------------LTPIGKLLAQLPVDVVVGKVLVLGALLGLAEPALTVAAALSVQSPFLRAAPGNPERATARRPLESPHGDPLTLLNVFNEWLQVKSERGGNSRKWCRRRGLEEHRLYEAANLRRQFQELLQDHQLL--EAASSRPSDSYSRQSRHRERRELHRLWRSHAETE-------GRKRKVLRLQDG-----------------------AGXXXXXXXXXGGADRRGERGIDIQDVKFKLRHDVEQLQAAAGAALSPAQLALLQLVLCRGLYPQLALPDPLNSGRKDSDQIFHTRSKQGLVLHPTCVFA 721
BLAST of mRNA_S-dermatodea_contig12285.1431.1 vs. uniprot
Match: A0A151MYR5_ALLMI (Putative ATP-dependent RNA helicase DHX34 isoform A n=3 Tax=Alligator mississippiensis TaxID=8496 RepID=A0A151MYR5_ALLMI) HSP 1 Score: 392 bits (1007), Expect = 6.000e-122 Identity = 254/602 (42.19%), Postives = 334/602 (55.48%), Query Frame = 1
Query: 52 GGDGKRTIFDARPYVKLLETIDGTTPRDERGDLLVFLSGMGDMLAVTEGVREYVEGKSPRRWVVLMLHSSLSVEEQDKVFDAAPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPMSGVRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYSRSTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLVDPRLFPYLSPPPPENLEAALEALALLGATDVAASGFCGSDDTITDTDPGETLPETRRDPGNGRSSDEIPGAPSAQQPDLSPPLPPLSRGEQGGPLSPAVAFDDATARAPLTPLGRVLSSLPVEPSVGKMLALASLFGEVEHVLTLAAALSTQTPFDARAAASASGANPVAEFASPDGDPFTVMNAYDEWIRVKAARQESSRRWCKRHGLQEQRLYEITKLRKQFEDLLSNTGLLWLGAAAQRARRXXXXXXXXXXXXXXXXXXASKDKIRELKMRRGGRKRKVLEVDHGVAGDGDAEXXXXXXXXXXXEAEDAQKDLRAEVGEGGGDGDVGLDLSSLEFYMAQDVDQLAESSGRRLARRDIAVLKAILCQGLYPHFAVADAGNAGRASNEQQYITRPSAGLFMSPSSVLA 1857
G GK+ D RPY+++L+ ID P +ERGDLLVFLSG+ ++ AV E + Y +RWVVL LHS+LS+ EQDKVFD P G RK IL+TNIAETSVTIDGVRFV DSGK KEMS+DP + ++ LQEFW+SRASAEQRKGRAGRTGPG+C+RLY+ S +D AP+ PEI+R L+ LVLQMKS+ L DPR FP+L PPPP +LE A+ L EQG A DDA LTP+G +L+ LPV+ VGKML L LFG E VLT AA LS Q+PF A A+ A SP GDP T++N +++W++VK+ R +SR+WC+R GL+E RLYE LR+QF+DLL + GL+ + +A RA ++ GR+RK L++ G A XXXXXXXXX RA +D+ ++F + +VD+L SG L+ + +A+LK +LC+GLYP AV D+ N+ R ++Q + TR G+ + P+SV A
Sbjct: 43 GAGGKQERLDPRPYLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVLEAAQTYAT--HTQRWVVLPLHSTLSIAEQDKVFDLPPPGVRKCILSTNIAETSVTIDGVRFVLDSGKVKEMSYDPQAKLQRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIQRVALDALVLQMKSMCLGDPRSFPFLEPPPPSSLETAMRYLR-----------------------------------------------------------------EQG-------ALDDAED---LTPIGSLLAQLPVDVVVGKMLVLGVLFGLAEPVLTAAALLSVQSPFLRPAHANPDCATARRPLESPHGDPLTLLNTFNQWVQVKSERSSNSRKWCRRRGLEEHRLYEAANLRRQFQDLLRDHGLVKVASA--RASDSYTRQSRHRERRELHRLWRRHEQTE-------GRRRKALKLQDGEAASSSXXXXXXXXXXX----------XRARS----------VDIQDVKFKLRHNVDELQAVSGSALSPQQLALLKLVLCRGLYPQLAVPDSFNSCRKDSDQIFHTRSKQGVVLHPTSVFA 538
BLAST of mRNA_S-dermatodea_contig12285.1431.1 vs. uniprot
Match: A0A7L0UPE0_CHOAC (DHX34 helicase (Fragment) n=1 Tax=Chordeiles acutipennis TaxID=118183 RepID=A0A7L0UPE0_CHOAC) HSP 1 Score: 387 bits (995), Expect = 5.870e-121 Identity = 246/614 (40.07%), Postives = 328/614 (53.42%), Query Frame = 1
Query: 43 SRGGGDGKRTIFDARPYVKLLETIDGTTPRDERGDLLVFLSGMGDMLAVTEGVREYVEGKSPRRWVVLMLHSSLSVEEQDKVFDAAPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPMSGVRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYSRSTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLVDPRLFPYLSPPPPENLEAALEALALLGATDVAASGFCGSDDTITDTDPGETLPETRRDPGNGRSSDEIPGAPSAQQPDLSPPLPPLSRGEQGGPLSPAVAFDDATARAPLTPLGRVLSSLPVEPSVGKMLALASLFGEVEHVLTLAAALSTQTPFDARAAASASGANPVAEFASPDGDPFTVMNAYDEWIR-VKAARQESSRRWCKRHGLQEQRLYEITKLRKQFEDLLSNTGLL-----WLGAAAQRARRXXXXXXXXXXXXXXXXXXASKDKIRELKMRRG---GRKRKVLEVDHGVAGDGDAEXXXXXXXXXXXEAEDAQKDLRAEVGEGGGDGDVGLDLSSLEFYMAQDVDQLAESSGRRLARRDIAVLKAILCQGLYPHFAVADAGNAGRASNEQQYITRPSAGLFMSPSSVLA 1857
S G GK D P++++L+TID P +ERGDLLVFLSG+ ++ AV E + Y +RW+VL LHS+LSV EQDKVFD P G RK IL+TNIAETSVTIDGVRFV DSGK KEMS+DP ++ LQEFW+SRASAEQRKGRAGRTGPG+C+RLY+ S +D +P+ PEI+R L+ LVLQ+KS+GL DPR FP+L PPP +LE AL L GA D A LTP+G +L+ LPV+ VGKML L +LFG VE LT+AAALS Q+PF A + A SP GDP T++N +++W++ VK+ R SSR+WC+R GL+E RLYE T LR+QF++LL + LL LG + +R R + ++ L R GRKRKVL + GV DA E G G G+ +D+ ++F + +V++L S L+ +A+LK +LC+GLYP AV D N+ R ++Q + T+ G+ + P+ + A
Sbjct: 12 STSGKPGKSERLDPLPFLRVLQTIDHKYPPEERGDLLVFLSGVAEIGAVLEAAQAYAA--RTQRWIVLPLHSTLSVTEQDKVFDVPPPGVRKCILSTNIAETSVTIDGVRFVLDSGKVKEMSYDPQGKLQRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFSPYPVPEIQRVALDALVLQLKSMGLGDPRTFPFLEPPPSSSLETALRYLKDQGALDEAED---------------------------------------------------------------------------LTPIGNLLAQLPVDVVVGKMLVLGALFGLVEPTLTVAAALSVQSPFLRSAHPNPDCATTRRPLESPHGDPLTLLNIFNQWVQQVKSERSCSSRKWCRRRGLEEHRLYEATNLRRQFQELLRDHQLLEEASNQLGDSYRRQSRHR-----------------ERRELHRLWRRHAETEGRKRKVLRLQDGV---------------------DASSGEEEEDGGTRGKGEHSIDIQDVKFKLRHNVEELQAVSSSVLSSSQLALLKLVLCRGLYPQLAVPDQLNSSRKDSDQIFHTKNKQGVVLHPTCIFA 510
BLAST of mRNA_S-dermatodea_contig12285.1431.1 vs. uniprot
Match: UPI0010A93603 (probable ATP-dependent RNA helicase DHX34 isoform X2 n=1 Tax=Ornithorhynchus anatinus TaxID=9258 RepID=UPI0010A93603) HSP 1 Score: 394 bits (1012), Expect = 6.310e-121 Identity = 262/667 (39.28%), Postives = 354/667 (53.07%), Query Frame = 1
Query: 76 FDARPYVKLLETIDGTTPRDERGDLLVFLSGMGDMLAVTEGVREYVEGKSPRRWVVLMLHSSLSVEEQDKVFDAAPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPMSGVRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYSRSTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLVDPRLFPYLSPPPPENLEAALEALALLGATDVAASGFCGSDDTITDTDPGETLPETRRDPGNGRSSDEIPGAPSAQQPDLSPPLPPLSRGEQGGPLSPAVAFDDATARAPLTPLGRVLSSLPVEPSVGKMLALASLFGEVEHVLTLAAALSTQTPFDARAAASASGANPVAEFASPDGDPFTVMNAYDEWIRVKAARQESSRRWCKRHGLQEQRLYEITKLRKQFEDLLSNTGLLWLGAAAQRARRXXXXXXXXXXXXXXXXXXASKDKIRELKMRRG---GRKRKVLEV--DHGVAGDGDAEXXXXXXXXXXXEAEDAQKDLRAEVGEGGGDGDVGLDLSSLEFYMAQDVDQL--AESSGRRLARRDIAVLKAILCQGLYPHFAVADAGNAGRASNEQQYITRPSAGLFMSPSSVLACQDFGVRAGGGGTAAAPTSRSLRAVPPQMRGEGTGCFVTAR*WRRSGRFCRRLRLSRRCKRCCCSA 2055
D RPY+++L+ ID P DERGDLLVFLSGM ++ AV E + Y +RW+VL LHS+LSV +QDKVFD AP G RK IL+TNIAETSVTIDGVRFV DSGK KEMS+DP + ++ LQEFW+SRASAEQRKGRAGRTGPG+C+RLY+ S +D AP+ PEI+R L+ LVLQMKS+GL DPR FP++ PPP +LE A+ L GA D A LTP+G +L+ LPV+ +GKML L SLF VE VLT+AAALS Q+PF ++ S GDPFT++NA++ W++VK+ R SR+WC+R GL+EQRLYE+ LR+QF++LL + GLL A R + ++R LK R GR+R+VL + G + GD + A+ D R EGG +D+ ++F + VD+L A S+GR L+R ++A+LK +L +GLYP A AD N+ R ++Q + T+ G + P+SV A ++ G G AA+ +S + ++R W+ + R C+ CC SA
Sbjct: 386 LDPRPYLRVLQAIDHRYPADERGDLLVFLSGMAEISAVQEAAQTYAT--HTQRWIVLPLHSTLSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGVRFVLDSGKVKEMSFDPKAKLQRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIQRVALDALVLQMKSMGLGDPRTFPFIEPPPSSSLETAVLYLRDQGALDAAED---------------------------------------------------------------------------LTPIGNLLAQLPVDVVIGKMLILGSLFQLVEPVLTVAAALSVQSPFLRSGHSNPDCGTARKPLESSHGDPFTLLNAFNAWVQVKSERGSGSRKWCRRRGLEEQRLYEMANLRRQFKELLRDHGLL----ADSRTT--------PADSFSRQRQHRERQELRRLKRRHEEGEGRRRRVLPLPGQEGGSSSGD---------------DAAEGDPR----EGGA-----VDIQDVKFKLRHSVDELQAAASAGRDLSRDELALLKLVLARGLYPQLAAADHFNSCRKDSDQIFHTKTKQGTVLHPTSVFASNPEVLQTGAMGRAASTSS-----------------WPSSRCWKPPNHTWSTVSACRPCRLCCSSA 922
BLAST of mRNA_S-dermatodea_contig12285.1431.1 vs. uniprot
Match: A0A7K4JV00_GEOCA (DHX34 helicase (Fragment) n=1 Tax=Geococcyx californianus TaxID=8947 RepID=A0A7K4JV00_GEOCA) HSP 1 Score: 385 bits (988), Expect = 7.070e-121 Identity = 242/602 (40.20%), Postives = 320/602 (53.16%), Query Frame = 1
Query: 52 GGDGKRTIFDARPYVKLLETIDGTTPRDERGDLLVFLSGMGDMLAVTEGVREYVEGKSPRRWVVLMLHSSLSVEEQDKVFDAAPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPMSGVRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYSRSTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLVDPRLFPYLSPPPPENLEAALEALALLGATDVAASGFCGSDDTITDTDPGETLPETRRDPGNGRSSDEIPGAPSAQQPDLSPPLPPLSRGEQGGPLSPAVAFDDATARAPLTPLGRVLSSLPVEPSVGKMLALASLFGEVEHVLTLAAALSTQTPFDARAAASASGANPVAEFASPDGDPFTVMNAYDEWIRVKAARQESSRRWCKRHGLQEQRLYEITKLRKQFEDLLSNTGLLWLGAAAQRARRXXXXXXXXXXXXXXXXXXASKDKIRELKMRRGGRKRKVLEVDHGVAGDGDAEXXXXXXXXXXXEAEDAQKDLRAEVGEGGGDGDVGLDLSSLEFYMAQDVDQLAESSGRRLARRDIAVLKAILCQGLYPHFAVADAGNAGRASNEQQYITRPSAGLFMSPSSVLA 1857
G GK D PY+++L+ ID P +ERGDLLVFLSG+ ++ AV E + Y +RW+VL LHS+LSV EQDKVFD P G RK IL+TNIAETSVTIDGVRFV DSGK KEMS+DP ++ LQEFW+SRASAEQRKGRAGRTGPG+C+RLY+ S +D +P+ PEI+R L+ LVLQ+KS+GL DPR FP+L PPP +LE A+ L RD G A DDA LTP+G +L+ LPV+ VGKML L +LFG E LT+AA LS Q+PF + + A SP GDP T++N ++EW++VK+ R SSR+WC+R GL+E RLYE LR+QF++LL + LL A+ + S + GRKRKVL + G ED G+G + G+D+ ++F + +V++L S L+ +AVLK +LC+GLYP AV D N GR ++Q + T+ G+ + P+SV A
Sbjct: 120 GKAGKPERLDPLPYLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVLEAAQAYAA--QTQRWIVLPLHSTLSVAEQDKVFDVPPPGVRKCILSTNIAETSVTIDGVRFVLDSGKVKEMSYDPQGKLQRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFSPYPVPEIQRVALDSLVLQLKSMGLGDPRTFPFLEPPPSSSLETAVRYL---------------------------------RDQG---------------------------------------ALDDAEE---LTPIGNLLAQLPVDVVVGKMLVLGALFGLAEPTLTVAATLSVQSPFLRSSQPNPDCATARRPLESPHGDPLTLLNIFNEWVQVKSERSGSSRKWCRRRGLEEHRLYEAANLRRQFQELLRDHRLL--EEASNQTSDSYSRQSRHRERRELHRLWRSHTETE-------GRKRKVLRLQDGA---------------DNSSGEDNDXXXXXNHGKG----ERGIDIQDVKFKLRHNVEELQAVSSSSLSSSRLAVLKLLLCRGLYPQLAVPDHLNTGRKDSDQIFHTKTKQGVVLHPTSVFA 616
BLAST of mRNA_S-dermatodea_contig12285.1431.1 vs. uniprot
Match: A0A8B9SIT6_ANAPL (DExH-box helicase 34 n=2 Tax=Anas TaxID=8835 RepID=A0A8B9SIT6_ANAPL) HSP 1 Score: 399 bits (1025), Expect = 1.080e-120 Identity = 250/600 (41.67%), Postives = 322/600 (53.67%), Query Frame = 1
Query: 61 GKRTIFDARPYVKLLETIDGTTPRDERGDLLVFLSGMGDMLAVTEGVREYVEGKSPRRWVVLMLHSSLSVEEQDKVFDAAPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPMSGVRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYSRSTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLVDPRLFPYLSPPPPENLEAALEALALLGATDVAASGFCGSDDTITDTDPGETLPETRRDPGNGRSSDEIPGAPSAQQPDLSPPLPPLSRGEQGGPLSPAVAFDDATARAPLTPLGRVLSSLPVEPSVGKMLALASLFGEVEHVLTLAAALSTQTPFDARAAASASGANPVAEFASPDGDPFTVMNAYDEWIRVKAARQESSRRWCKRHGLQEQRLYEITKLRKQFEDLLSNTGLLWLGAAAQRARRXXXXXXXXXXXXXXXXXXASKDKIRELKMRRGGRKRKVLEVDHGVAGDGDAEXXXXXXXXXXXEAEDAQKDLRAEVGEGGGD-GDVGLDLSSLEFYMAQDVDQLAESSGRRLARRDIAVLKAILCQGLYPHFAVADAGNAGRASNEQQYITRPSAGLFMSPSSVLA 1857
GK D RPY+++L+ ID P +ERGDLLVFLSG+ ++ AV E + Y +RW+VL LHS+LSV EQDKVFD P G RK ILATNIAETSVTIDGVRFV DSGK KEMS+DP ++ LQEFW+SRASAEQRKGRAGRTGPG+C+RLY+ S +D P+ PEI+R L+ LVLQ+KS+GL DPR FP+L PPP +LE A+ L GA D A LTP+G +L+ LPV+ VGKML L +LFG E LT+AAALS Q+PF + A+ A SP GDP T++NA++EW++VK+ R SSR+WC+R GL+E RLYE LR+QF++LL + LL AA R + + GRKRKVL + G AG E E G G + G+ G+D+ ++F + DVD+L SG L+ +A+LK +LC+GLYP AV DA N R ++Q + TR G+ + PS V A
Sbjct: 346 GKAERLDPRPYLRVLQAIDHKYPPEERGDLLVFLSGVAEISAVQEAAQVYAT--QTQRWIVLPLHSTLSVSEQDKVFDVPPPGVRKCILATNIAETSVTIDGVRFVLDSGKVKEMSYDPQGKLQRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDSFPPYPVPEIQRVALDALVLQVKSMGLGDPRTFPFLEPPPSASLETAVRYLREQGALDEAEE---------------------------------------------------------------------------LTPIGTLLAQLPVDVVVGKMLVLGALFGLAEPTLTVAAALSVQSPFLRLSNANPDCATARRPLESPHGDPLTLLNAFNEWVQVKSERGGSSRKWCRRRGLEEHRLYEAANLRRQFQELLRDHRLL--EAAPNRPSDSYSRQSRHRERRELHRLWRHHTETQ-------GRKRKVLRLHDGTAGSSGEE----------------------EEGAGSREPGERGVDIQDVKFKLRHDVDELQAVSGSVLSPSQLALLKLVLCRGLYPQLAVPDALNNSRKDSDQIFHTRSKQGVVLHPSCVFA 837 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12285.1431.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig12285.1431.1 >prot_S-dermatodea_contig12285.1431.1 ID=prot_S-dermatodea_contig12285.1431.1|Name=mRNA_S-dermatodea_contig12285.1431.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=36bp METQRPFLSSVTPLPALQALLLFSARVDTSEDASLVback to top mRNA from alignment at S-dermatodea_contig12285:253..6316- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig12285.1431.1 ID=mRNA_S-dermatodea_contig12285.1431.1|Name=mRNA_S-dermatodea_contig12285.1431.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6064bp|location=Sequence derived from alignment at S-dermatodea_contig12285:253..6316- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig12285:253..6316- >mRNA_S-dermatodea_contig12285.1431.1 ID=mRNA_S-dermatodea_contig12285.1431.1|Name=mRNA_S-dermatodea_contig12285.1431.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=216bp|location=Sequence derived from alignment at S-dermatodea_contig12285:253..6316- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |