mRNA_S-dermatodea_contig12235.1401.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig12235.1401.1
Unique NamemRNA_S-dermatodea_contig12235.1401.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig12235.1401.1 vs. uniprot
Match: D7FHW3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHW3_ECTSI)

HSP 1 Score: 576 bits (1485), Expect = 1.770e-192
Identity = 449/843 (53.26%), Postives = 494/843 (58.60%), Query Frame = 1 
Query:   10 ALDFVHSGGRVHRDVKPANLLITRKGDLKLADFGAAGVENSSRMVGTQRFMAPERLKGRPASAQSDLWSFGLSLATAALGDDFMAQASNEFEQLDLAGRARSTLAKATTLSAELRDFLHRCLSRDPARRPALRDLMKHPFLEQRHNWASKCPEVALAMRDRKRRQREAATALSTDAVLTALCEARAEDNLISSRVDTTTAADLAYELGVTAKSLVRNVHRRTLELIRERGGGLA-------------GVSDSGGDNGDDAAGPGSGRCRVGSGIASDARARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVGLVIESDGSWSPVGSPPVTGEAPADGPQILAPVAPFATVGGSSS----STNSNLPPVTPRNRKTEGRAGGVTGTATFGSRNTSSVSR--RRGRRAVEISSAVKLTPRKRRGERKSSHTKRNGSRC-ADAARRAR-------------------------------------------------------HQRETERGTVTETSTPAXXXXXXXAAATXXXXXXXXXXXDGTGCRRSKGEHRGAAGGGXCSGSRRASGPRKMKE--KPRTAASRILPSRTDVSLRSVRNMFQVADAMKAQILVRDRVHRLRVYLNCFSGREAVQWMLDGCHASSVIEAERLGNEMMKASVFQHILNSHVFEDSSVYYQFTDGETPPPPARGGKRLRQIARVFRGHVARKFVPNGGGTAGASPASGASGGFEPSVIARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPSSLRKPPRLPKSSGIDRSKHRRSRCRQASGASTIGSQA--QLRSFGSSMSTVTVPETPY 2301
            ALDFVHS GRVHRDVKPANLLITR GDLKL DFGAAGVENSSRMVGTQRFMAPERLKG  A+AQSDLWS GLSLATAA GDDF++Q SN+F QLD+A R R  L+K TTLSAEL DFLH CLSRDPARRPALRDLMKHPFL QR NW +KCPEVALAM+DRKR Q    +A+  + VL ALC  RAE+NLI +  D  TAADLAYELGVT  SLVR+VHRRTLE IRERGGG               GVSDSG +NGD+       R R   G   + R R    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               E   S               D   +   + P AT  G  S      N+  P VTPR+R T G   G TG A FG R+++ VS   R  RRA+E+S AVKLTP KRRGERK+S TKRNGS C A+  RRA                                                        HQR  E G  T    P        A   XXXX       DG    R    H  A          R S  RK K   +PRTA+SR LPSR DV  RS+R +FQ+AD MKAQI VRDRVHRLRVY  CFSGREAVQWMLDGCHASSV+EAE +GNEMMKASVFQHILNSHVFEDSSVYYQFTDG+TPPPP+RG +RLRQIARV  GHVAR+ VP+GGG  G     GA+    P     G                              S L    +  +         RRSR R        GSQ+  QLR F SSMST+TVPETPY
Sbjct:    2 ALDFVHSCGRVHRDVKPANLLITRNGDLKLGDFGAAGVENSSRMVGTQRFMAPERLKGHRATAQSDLWSLGLSLATAAFGDDFISQGSNQFVQLDMACRVRRRLSKTTTLSAELMDFLHSCLSRDPARRPALRDLMKHPFLSQRQNWQAKCPEVALAMQDRKRLQSGDVSAI--EEVLDALCHVRAEENLIGTSFDPATAADLAYELGVTTDSLVRDVHRRTLEFIRERGGGSGXXXXXSGSLSSSGGVSDSGDENGDEM------RSRDSDG--GEDRWRTISGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTREERPVHRGGEGRREESCSPRXXXXXXXXXXXXXDALTLAMDMIPTATREGDGSIPRSGGNNAYPLVTPRDRPTRG---GATGGAGFGGRHSTVVSSNTRSRRRALEMSPAVKLTPHKRRGERKASQTKRNGSSCVANGTRRAGRGXXXXXXXXXXXXXTEPETSISGSPQEQATEVVTAAAETAVEGLYARVTGTDRDHQRFREAGAATVAG-PGAGHVGAAAXXXXXXXSAGITAADGLPSCRDNLVHTAAC---------RRSWERKCKRNSRPRTASSRTLPSRADVRTRSMRGVFQLADEMKAQIAVRDRVHRLRVYPRCFSGREAVQWMLDGCHASSVMEAENIGNEMMKASVFQHILNSHVFEDSSVYYQFTDGDTPPPPSRGSRRLRQIARVVGGHVARRLVPSGGGAGGI----GAADCICPVAPGNG------------------------------SGLANQHQASRPGDRGSKVKRRSRGR--------GSQSVLQLRRFSSSMSTLTVPETPY 779
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BLAST of mRNA_S-dermatodea_contig12235.1401.1 vs. uniprot
Match: A0A836C8E3_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8E3_9STRA)

HSP 1 Score: 151 bits (381), Expect = 1.890e-37
Identity = 75/143 (52.45%), Postives = 101/143 (70.63%), Query Frame = 1 
Query:   10 ALDFVHSGGRVHRDVKPANLLITRKGDLKLADFGAAGVENSSRMVGTQRFMAPERLKGRPASAQSDLWSFGLSLATAALGDDFMAQASNEFEQLDLAGRARSTLAKATTLSAELRDFLHRCLSRDPARRPALRDLMKHPFLEQ 438
            AL  +H  GR HRD+KPAN LIT +GD KLADFG A  +   RMVGT+R++ PE LKG     +SD+WSFGL++A AA  D  +AQA NEFEQL  A R R+T+A+   +S +LRDFL  CL  +P+ R ++ +L++HPFL++
Sbjct:  122 ALQTLHENGRTHRDIKPANCLITCEGDAKLADFGCASGDLGRRMVGTRRYLPPEVLKGEAVLPKSDVWSFGLTMAAAACADPPVAQAQNEFEQLQAAERVRTTIAQLHNISPQLRDFLSLCLVVNPSERASIAELLEHPFLQR 264
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BLAST of mRNA_S-dermatodea_contig12235.1401.1 vs. uniprot
Match: A0A835Z6W9_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6W9_9STRA)

HSP 1 Score: 145 bits (367), Expect = 2.030e-36
Identity = 77/142 (54.23%), Postives = 99/142 (69.72%), Query Frame = 1 
Query:   10 ALDFVHSGGRVHRDVKPANLLITRKGDLKLADFGAAGVENSSRMVGTQRFMAPERLKGRPASAQSDLWSFGLSLATAALGDDFMAQASNEFEQLDLAGRARSTLA-KATTLSAELRDFLHRCLSRDPARRPALRDLMKHPFL 432
            AL ++HS GR H DVKPAN+L+TR+GD KLADFG A    +  M+GT+R+MAPERLKG     +SD+WSFGL++A AAL +  +AQA NEF+Q+    R R  +A +   LS ELRDFL  CL  DPA R  +  L++HPFL
Sbjct:   52 ALQYLHSCGRAHCDVKPANVLVTREGDAKLADFGCASSSVARTMLGTRRYMAPERLKGEQVVPESDVWSFGLAMAAAALAECPVAQAHNEFDQVHEGERVRGFIAAQHGALSPELRDFLCACLEPDPAARAGVAALLRHPFL 193
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BLAST of mRNA_S-dermatodea_contig12235.1401.1 vs. uniprot
Match: A0A7S1TZN7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZN7_9STRA)

HSP 1 Score: 105 bits (261), Expect = 5.430e-21
Identity = 58/150 (38.67%), Postives = 86/150 (57.33%), Query Frame = 1 
Query:    7 QALDFVHSGGRVHRDVKPANLLITRKGDLKLADFGAAG-----VENSSRMVGTQRFMAPERLKGRPASAQSDLWSFGLSLATAALGD-DFMAQASNEFEQLDLAGRARSTLAK--ATTLSAELRDFLHRCLSRDPARRPALRDLMKHPFL 432
            + L F+HS  R+HRD+KP+NLLI   G++K  DFG A      +  +   VGT  +M+PER+ G+P +  SD+W+FGL++ T ALG   +  QA++  +   +    R   A       S+    FL  CL +DP RRP+   L++HPFL
Sbjct:   67 RGLAFLHSRRRMHRDIKPSNLLINHTGEVKFCDFGLARDLDHTLAQAETFVGTYPYMSPERISGQPYTTSSDIWAFGLTMMTLALGRFPYSGQATDVHDYWSMLHALRDAPAPELGAGFSSSFASFLAACLEKDPDRRPSADALLEHPFL 216
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BLAST of mRNA_S-dermatodea_contig12235.1401.1 vs. uniprot
Match: A0A2R5GRK5_9STRA (Mitogen-activated protein kinase kinase 3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GRK5_9STRA)

HSP 1 Score: 108 bits (270), Expect = 6.020e-21
Identity = 58/149 (38.93%), Postives = 86/149 (57.72%), Query Frame = 1 
Query:    7 QALDFVHSGGRVHRDVKPANLLITRKGDLKLADFGAAGVENS-----SRMVGTQRFMAPERLKGRPASAQSDLWSFGLSLATAALGDDFMAQASNEFEQLDLAGRARSTLAKATTLSAELRDFLHRCLSRDPARRPALRDLMKHPFLEQ 438
            + L F+H   ++HRD+KP+NLLI  +G++K++DFG      S     S  VGT  +M+PER+ G   +A SD+WSFGLSL + ALG   +A A   +  L                S  + DF+ +CL+RDP +RP+   L++HPF+ Q
Sbjct:  324 RGLQFIHERHQIHRDIKPSNLLINHRGEVKISDFGIVRELESTQAMASTFVGTLTYMSPERISGLAYNANSDVWSFGLSLMSVALGTYPLATAGGYWALLSSLNEGPVPRLPEDRFSPIMIDFVAQCLTRDPHQRPSCEQLLQHPFVTQ 472
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BLAST of mRNA_S-dermatodea_contig12235.1401.1 vs. uniprot
Match: A0A1Y3BVD7_EURMA (Dual specificity mitogen-activated protein kinase kinase 1-like protein n=1 Tax=Euroglyphus maynei TaxID=6958 RepID=A0A1Y3BVD7_EURMA)

HSP 1 Score: 105 bits (263), Expect = 3.920e-20
Identity = 55/136 (40.44%), Postives = 81/136 (59.56%), Query Frame = 1 
Query:   40 VHRDVKPANLLITRKGDLKLADFGAAGV---ENSSRMVGTQRFMAPERLKGRPASAQSDLWSFGLSLATAALGDDFMAQASNEFEQLDLAGRARSTLAKATTLSAELRDFLHRCLSRDPARRPALRDLMKHPFLEQ 438
            +HRDVKP+N+L+  +G++K+ DFG +G      ++  VGT+ +M+PERL+G   S QSD+WS GLSL   ALG     Q  + F QLD            +  S E +DF+  CL ++P+ RP L  LM HP++ +
Sbjct:  303 IHRDVKPSNILVNSRGEIKICDFGVSGQLIDSMANSFVGTRSYMSPERLQGNHYSVQSDIWSLGLSLVEMALGP---VQPLSIFAQLDYIVMDPPPTLPLSVFSREFKDFVDSCLKKNPSERPDLNGLMNHPYIRR 435
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BLAST of mRNA_S-dermatodea_contig12235.1401.1 vs. uniprot
Match: D7FS87_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS87_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 5.660e-20
Identity = 67/150 (44.67%), Postives = 90/150 (60.00%), Query Frame = 1 
Query:    7 QALDFVHSGGRVHRDVKPANLLITRKGDLKLADFGAA----GVENSSRMVGTQRFMAPERLKGRPASAQSDLWSFGLSLATAALGDDFMAQASNEFEQLDLAGRA----RSTLAKATTLSAELRDFLHRCLSRDPARRPALRDLMKHPFL 432
            +AL ++H  G +HRDVKPAN+L+   G  +L DFG+       E   RM GT RFM+PERL  RP    SDLW+ GL++A+AALG++ +  ++N+FE    A  A    RS  A A  LS  L DFL   L  DP RRP +  ++ HP+L
Sbjct:  292 EALRYLHERGFIHRDVKPANVLLG-PGGARLVDFGSTIDDREDECGGRMHGTVRFMSPERLCARPYRPSSDLWAAGLTVASAALGENPVPHSANKFEAAGHAEVAFEMVRSHPASAG-LSPSLLDFLRAVLVADPERRPTVEQMLAHPYL 439
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BLAST of mRNA_S-dermatodea_contig12235.1401.1 vs. uniprot
Match: A0A1X0P935_9TRYP (Protein kinase n=1 Tax=Trypanosoma theileri TaxID=67003 RepID=A0A1X0P935_9TRYP)

HSP 1 Score: 103 bits (256), Expect = 6.020e-20
Identity = 63/149 (42.28%), Postives = 88/149 (59.06%), Query Frame = 1 
Query:   13 LDFVHSGGRV-HRDVKPANLLITRKGDLKLADFGAAGV----ENSSRMVGTQRFMAPERLKGRPASAQSDLWSFGLSLATAALGDDFMA--QASNEFEQLD-LAGRARSTLAKATTLSAELRDFLHRCLSRDPARRPALRDLMKHPFLE 435
            L ++H   RV HRD+KP+NLLI   G +K+ DFG + +    + SS  VGT  FMAPERL+    S  SD+WS GL++     G +  A  +  N F+ L  ++G    TL +    S E RDF+ +CL RDP +RP+  DL+KHPF +
Sbjct:  168 LVYLHDKKRVIHRDIKPSNLLIRDDGYVKIGDFGVSKLVQTLDVSSTYVGTMYFMAPERLEQGAYSFSSDVWSLGLTMIATVTGKNPWAPPEEMNLFQLLGRISGDTTPTLPEKPAYSDEARDFVRKCLVRDPQQRPSTADLLKHPFFK 316
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BLAST of mRNA_S-dermatodea_contig12235.1401.1 vs. uniprot
Match: Q582P9_TRYB2 (Protein kinase, putative n=3 Tax=Trypanozoon TaxID=39700 RepID=Q582P9_TRYB2)

HSP 1 Score: 102 bits (254), Expect = 1.140e-19
Identity = 63/149 (42.28%), Postives = 87/149 (58.39%), Query Frame = 1 
Query:   13 LDFVHSGGRV-HRDVKPANLLITRKGDLKLADFGAAGV----ENSSRMVGTQRFMAPERLKGRPASAQSDLWSFGLSLATAALGDDFMAQAS--NEFEQLD-LAGRARSTLAKATTLSAELRDFLHRCLSRDPARRPALRDLMKHPFLE 435
            L ++H   RV HRD+KP+NLLI   G +K++DFG + +    + SS  VGT  FMAPERL+    S  SD+WS GL++     G +  A     N F+ L  +AG    +L +    S E RDF+ +CL RDP  RP+  +L+KHPF E
Sbjct:  171 LVYLHDTKRVIHRDLKPSNLLIRDDGYVKISDFGVSKLVQTLDVSSTYVGTMYFMAPERLEQTVYSFSSDIWSLGLTVIATVTGKNPWAPPDEMNLFQLLGKIAGETTPSLPEKPVYSEEARDFIKKCLVRDPQERPSAAELLKHPFFE 319
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BLAST of mRNA_S-dermatodea_contig12235.1401.1 vs. uniprot
Match: A0A8H7S6V8_9FUNG (Protein kinase domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S6V8_9FUNG)

HSP 1 Score: 102 bits (253), Expect = 1.490e-19
Identity = 57/153 (37.25%), Postives = 88/153 (57.52%), Query Frame = 1 
Query:    7 QALDFVHSGGRVHRDVKPANLLITRKGDLKLADFGAAGVENSSR---MVGTQRFMAPERLKGRPASAQSDLWSFGLSLATAALGDDFMAQASNE----FEQLD-LAGRARSTLAKATTLSAELRDFLHRCLSRDPARRPALRDLMKHPFLEQR 441
            + L ++HS   +HRD+KP+N+L+TR G++KL D G +G   +S      GTQ +MAPER+KG   S QSD+WS GL++   A     +          FE LD +  +    L    ++  E RDF+ +CL +DP  RP    +++HPF+++R
Sbjct:  202 KGLIYLHSKNVIHRDIKPSNILMTRNGEIKLCDLGVSGELINSMAETFTGTQYYMAPERIKGATYSVQSDIWSLGLTIIEVAQNHPALPPPGQPHLSVFELLDFIVSQPLPNLGDDRSI--ECRDFISKCLIKDPLERPGPERMLEHPFIKER 352
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12235.1401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHW3_ECTSI1.770e-19253.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C8E3_9STRA1.890e-3752.45Kinase-like domain-containing protein (Fragment) n... [more]
A0A835Z6W9_9STRA2.030e-3654.23Kinase-like domain-containing protein (Fragment) n... [more]
A0A7S1TZN7_9STRA5.430e-2138.67Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A2R5GRK5_9STRA6.020e-2138.93Mitogen-activated protein kinase kinase 3 n=1 Tax=... [more]
A0A1Y3BVD7_EURMA3.920e-2040.44Dual specificity mitogen-activated protein kinase ... [more]
D7FS87_ECTSI5.660e-2044.67Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A1X0P935_9TRYP6.020e-2042.28Protein kinase n=1 Tax=Trypanosoma theileri TaxID=... [more]
Q582P9_TRYB21.140e-1942.28Protein kinase, putative n=3 Tax=Trypanozoon TaxID... [more]
A0A8H7S6V8_9FUNG1.490e-1937.25Protein kinase domain-containing protein n=1 Tax=M... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12235contigS-dermatodea_contig12235:2575..6072 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score516.9
Seed ortholog evalue1.5e-143
Seed eggNOG ortholog2880.D7FHW3
KEGG koko:K08838
EggNOG free text desc.MAP kinase kinase kinase kinase activity
EggNOG OGsKOG0201@1,KOG0201@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01001,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSTE/STE7 protein kinase
Ec32 orthologEc-12_006120.1
Exons2
Model size2364
Cds size2166
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12235.1401.1prot_S-dermatodea_contig12235.1401.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig12235 2713..6012 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924238.4753652-UTR-S-dermatodea_contig12235:2574..27121622924238.4753652-UTR-S-dermatodea_contig12235:2574..2712Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12235 2575..2712 +
1694079116.24688-UTR-S-dermatodea_contig12235:2574..27121694079116.24688-UTR-S-dermatodea_contig12235:2574..2712Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12235 2575..2712 +
1622924238.5063157-UTR-S-dermatodea_contig12235:6012..60721622924238.5063157-UTR-S-dermatodea_contig12235:6012..6072Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12235 6013..6072 +
1694079116.2882981-UTR-S-dermatodea_contig12235:6012..60721694079116.2882981-UTR-S-dermatodea_contig12235:6012..6072Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12235 6013..6072 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924238.4855304-CDS-S-dermatodea_contig12235:2712..27151622924238.4855304-CDS-S-dermatodea_contig12235:2712..2715Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12235 2713..2715 +
1694079116.2719135-CDS-S-dermatodea_contig12235:2712..27151694079116.2719135-CDS-S-dermatodea_contig12235:2712..2715Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12235 2713..2715 +
1622924238.4937398-CDS-S-dermatodea_contig12235:3849..60121622924238.4937398-CDS-S-dermatodea_contig12235:3849..6012Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12235 3850..6012 +
1694079116.280339-CDS-S-dermatodea_contig12235:3849..60121694079116.280339-CDS-S-dermatodea_contig12235:3849..6012Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12235 3850..6012 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig12235.1401.1

>prot_S-dermatodea_contig12235.1401.1 ID=prot_S-dermatodea_contig12235.1401.1|Name=mRNA_S-dermatodea_contig12235.1401.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=722bp
MVGTQRFMAPERLKGRPASAQSDLWSFGLSLATAALGDDFMAQASNEFEQ
LDLAGRARSTLAKATTLSAELRDFLHRCLSRDPARRPALRDLMKHPFLEQ
RHNWASKCPEVALAMRDRKRRQREAATALSTDAVLTALCEARAEDNLISS
RVDTTTAADLAYELGVTAKSLVRNVHRRTLELIRERGGGLAGVSDSGGDN
GDDAAGPGSGRCRVGSGIASDARARRRRRSENRRRGNDKGEEKNAGEAGE
HGGDCGCGFGEAGGSAGGDSVGLVIESDGSWSPVGSPPVTGEAPADGPQI
LAPVAPFATVGGSSSSTNSNLPPVTPRNRKTEGRAGGVTGTATFGSRNTS
SVSRRRGRRAVEISSAVKLTPRKRRGERKSSHTKRNGSRCADAARRARHQ
RETERGTVTETSTPAETPTEKEAAATTTPATETPNETDGTGCRRSKGEHR
GAAGGGGCSGSRRASGPRKMKEKPRTAASRILPSRTDVSLRSVRNMFQVA
DAMKAQILVRDRVHRLRVYLNCFSGREAVQWMLDGCHASSVIEAERLGNE
MMKASVFQHILNSHVFEDSSVYYQFTDGETPPPPARGGKRLRQIARVFRG
HVARKFVPNGGGTAGASPASGASGGFEPSVIARGGNNSGGSGGARASGAG
TGGGGGAESSSSVPSSLRKPPRLPKSSGIDRSKHRRSRCRQASGASTIGS
QAQLRSFGSSMSTVTVPETPY*
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mRNA from alignment at S-dermatodea_contig12235:2575..6072+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig12235.1401.1 ID=mRNA_S-dermatodea_contig12235.1401.1|Name=mRNA_S-dermatodea_contig12235.1401.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3498bp|location=Sequence derived from alignment at S-dermatodea_contig12235:2575..6072+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GCACGCCAGGCGCTAGACTTCGTTCACTCGGGTGGTCGGGTGCACCGTGA
CGTCAAGCCGGCCAACCTCCTCATCACCAGGAAGGGGGACCTGAAGCTTG
CGGATTTCGGCGCGGCCGGCGTGGAGAACTCATCGCGAATGGTAAGAGGT
CGAGAGAGGGAGAGAGAGAGAGGGGAGTCATAGATCAGGCGTCGTTATCA
TGGCAACAGCCCGTTCGTTGCCTCCGTTTGATGCTGTCGCGCTTTGGCAG
ATATTGCCACCGGCTTCGCACAAAAAAATTGTAGCACCTGTTTGATATCA
TATTATACCACAGGTATACACTACTGTAGTATTTTGTGCCATGCCGCATC
CGCCCTCTGGCTTGTCTCTTGCGCGTGTTTTGTTTGGGCGCGTGCTCTCG
CGGTGCGCTTGCTGCTGCCGACGGTCTCCGTCCCCTGCCGCCACCCCTGG
TCTCGTGGCAAGAATATCCTTGGTTCAGCGGGATGTCTCCGATGCGGCGT
TTTGCTAGAATCACACCGGTCATTGGTCGGTTGTGGGGAGGCCAGCTTAC
CGGCTCTATTATTTGCGTGCATTGGTTGCGGCGAGGTGCACTGGCACTAG
CGAAAGTGCATCGAAACTTGATTGAGTTGGACCTGGGTTGTCGCAGCTGT
CCTTGCAGCCGAGAGAGGCGGCGTGTTATAACTCTGTCCATGTCTTATTT
TTGTCGAGTTTCGGGAAGAAGACGGCGGTTCACTGCTTCGGGTTGATGCC
GCTGCCGCTCACTGGCGGGGGGTAGGGCGGTGTGACTCTAAGTGAGTGAC
CCCCCCCCCCCCCCCCCCAGTGCCTCTTTGTCCCTTCGGTGAAGGAAGGT
GCCGGACACGGTCTCGAGTCGAGGCGTGTCGCGGGTTGGTTGGGGTGGAC
GTGTGTGGTGATGCCACAAACACGGCGGCTGTGGTGACACCTTTCTCCCC
TCTGCTGTTTGGTGCTGCGCCAACCGTGTATTTTGGTCAACCGCTCTTTC
GTGCTACAGTATGTATGCATGTTGGTATCGACACCGCTGATAAGCGTTGT
GTGCTTTTTCTCTAAATACCAAGTGTAGAGTTCCTCGACGCGCCTCAAAC
CAGCACCCGTCAAAACCCTTCATGTTAAAAGTATGTGATACAAGGTACAA
TCCTCAGGTTCCATTAATTGTACACTTGCATCGGCCACGCGCGTTTCCTA
TGTACCACTTTCCTCCCCATTTCTTACCCCCCTCGTCCTTAATTCGTTTT
TTTGTTTTTTTGTTCTCCCCAACAGGTCGGCACGCAGCGCTTCATGGCAC
CAGAGCGATTGAAGGGGCGTCCAGCCTCGGCGCAGTCCGACCTTTGGTCC
TTCGGGCTGTCGCTGGCGACGGCGGCGCTCGGCGACGACTTCATGGCGCA
GGCGAGCAACGAGTTCGAGCAGCTCGACCTCGCCGGGCGTGCGCGAAGCA
CTCTTGCGAAGGCGACCACCCTATCCGCGGAGCTCAGGGACTTCCTCCAC
CGGTGCCTCTCGAGAGACCCGGCGCGCCGACCAGCTCTCCGGGATCTCAT
GAAGCACCCATTCCTGGAGCAGCGACACAACTGGGCAAGCAAGTGCCCCG
AAGTGGCGCTTGCCATGCGCGATCGCAAGCGGCGGCAGCGCGAGGCCGCG
ACCGCGCTGAGCACGGACGCGGTGCTCACTGCTCTGTGCGAGGCGCGCGC
GGAGGACAACCTCATATCGTCAAGGGTGGACACGACGACGGCCGCTGACC
TGGCGTACGAGCTGGGCGTCACGGCGAAAAGCCTCGTGCGCAACGTCCAC
AGGCGCACGCTGGAGCTAATCCGTGAGCGCGGCGGTGGCCTCGCCGGTGT
GAGCGACAGCGGCGGGGATAACGGCGACGACGCGGCGGGTCCGGGGTCCG
GTCGGTGTCGAGTCGGCAGCGGCATAGCGAGCGACGCGAGAGCGAGGAGG
CGGAGAAGAAGCGAGAACCGCCGGCGCGGAAACGATAAGGGGGAAGAAAA
GAACGCGGGTGAGGCGGGAGAACACGGGGGGGACTGCGGCTGCGGCTTCG
GCGAGGCCGGCGGAAGCGCCGGAGGTGACAGCGTCGGCCTGGTGATCGAG
TCGGACGGATCGTGGTCTCCCGTGGGCTCTCCCCCCGTAACGGGGGAGGC
GCCCGCGGATGGGCCACAAATTCTCGCGCCGGTGGCTCCGTTCGCGACCG
TCGGCGGCAGCAGCAGCAGTACTAACAGCAACCTCCCGCCGGTGACGCCG
CGGAATCGAAAGACGGAGGGGCGGGCAGGGGGCGTAACGGGAACAGCGAC
GTTCGGCAGCCGGAACACGTCGTCGGTTTCGAGAAGGCGCGGCAGGAGAG
CGGTGGAGATATCGTCCGCCGTGAAGCTGACCCCGCGGAAACGCAGAGGC
GAGAGGAAGTCCTCGCACACGAAAAGGAACGGGTCTCGCTGCGCAGACGC
CGCGCGACGGGCGAGACACCAGCGGGAGACGGAGCGCGGCACGGTCACGG
AGACCTCGACCCCCGCGGAGACGCCGACTGAGAAGGAGGCGGCGGCTACG
ACCACGCCCGCGACCGAGACCCCGAACGAAACCGACGGTACTGGCTGCAG
GCGTTCAAAGGGGGAACACCGGGGCGCCGCCGGTGGTGGTGGTTGTAGTG
GTAGCCGGAGAGCTTCGGGCCCGCGGAAGATGAAGGAGAAGCCGCGGACG
GCCGCGTCACGAATCCTACCGAGCCGGACGGATGTGTCGCTCCGGTCGGT
GCGGAACATGTTTCAGGTGGCGGACGCGATGAAGGCGCAGATCCTGGTGA
GAGATCGCGTCCACCGGCTCCGCGTGTACCTGAACTGCTTCTCGGGGAGG
GAGGCCGTGCAGTGGATGCTGGACGGGTGCCACGCGTCATCCGTCATCGA
GGCCGAGAGGCTCGGCAACGAGATGATGAAAGCCTCCGTTTTCCAGCACA
TCCTCAACTCCCACGTTTTCGAGGACTCGTCCGTGTACTACCAGTTCACC
GACGGCGAGACGCCGCCCCCGCCCGCGAGAGGCGGGAAGCGCCTGCGCCA
GATCGCGCGCGTTTTCCGCGGTCACGTTGCCCGAAAGTTCGTGCCCAACG
GCGGTGGCACCGCGGGCGCGAGTCCCGCCTCGGGAGCGAGCGGCGGTTTC
GAGCCCAGCGTCATCGCCAGGGGCGGCAATAACAGCGGAGGCTCCGGCGG
GGCTCGGGCGAGTGGTGCGGGGACCGGCGGCGGCGGTGGCGCCGAGTCCT
CATCTTCGGTGCCATCGTCTCTGAGGAAGCCGCCGAGGCTGCCGAAGTCG
AGCGGGATAGACCGGAGCAAGCACAGGCGGAGTCGGTGTCGGCAGGCGAG
CGGAGCGTCGACCATCGGATCGCAGGCGCAGCTGCGCAGCTTCGGCAGTA
GCATGAGCACGGTCACCGTGCCCGAGACCCCGTACTAGCGGGGAGGGGGA
TCGAGCGCCGGCGTCGGAGTCTTGGGAGCTTGTGATATTTTGGGCGGC
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Coding sequence (CDS) from alignment at S-dermatodea_contig12235:2575..6072+

>mRNA_S-dermatodea_contig12235.1401.1 ID=mRNA_S-dermatodea_contig12235.1401.1|Name=mRNA_S-dermatodea_contig12235.1401.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=4332bp|location=Sequence derived from alignment at S-dermatodea_contig12235:2575..6072+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGATGGTCGGCACGCAGCGCTTCATGGCACCAGAGCGATTGAAGGGGCG
TCCAGCCTCGGCGCAGTCCGACCTTTGGTCCTTCGGGCTGTCGCTGGCGA
CGGCGGCGCTCGGCGACGACTTCATGGCGCAGGCGAGCAACGAGTTCGAG
CAGCTCGACCTCGCCGGGCGTGCGCGAAGCACTCTTGCGAAGGCGACCAC
CCTATCCGCGGAGCTCAGGGACTTCCTCCACCGGTGCCTCTCGAGAGACC
CGGCGCGCCGACCAGCTCTCCGGGATCTCATGAAGCACCCATTCCTGGAG
CAGCGACACAACTGGGCAAGCAAGTGCCCCGAAGTGGCGCTTGCCATGCG
CGATCGCAAGCGGCGGCAGCGCGAGGCCGCGACCGCGCTGAGCACGGACG
CGGTGCTCACTGCTCTGTGCGAGGCGCGCGCGGAGGACAACCTCATATCG
TCAAGGGTGGACACGACGACGGCCGCTGACCTGGCGTACGAGCTGGGCGT
CACGGCGAAAAGCCTCGTGCGCAACGTCCACAGGCGCACGCTGGAGCTAA
TCCGTGAGCGCGGCGGTGGCCTCGCCGGTGTGAGCGACAGCGGCGGGGAT
AACGGCGACGACGCGGCGGGTCCGGGGTCCGGTCGGTGTCGAGTCGGCAG
CGGCATAGCGAGCGACGCGAGAGCGAGGAGGCGGAGAAGAAGCGAGAACC
GCCGGCGCGGAAACGATAAGGGGGAAGAAAAGAACGCGGGTGAGGCGGGA
GAACACGGGGGGGACTGCGGCTGCGGCTTCGGCGAGGCCGGCGGAAGCGC
CGGAGGTGACAGCGTCGGCCTGGTGATCGAGTCGGACGGATCGTGGTCTC
CCGTGGGCTCTCCCCCCGTAACGGGGGAGGCGCCCGCGGATGGGCCACAA
ATTCTCGCGCCGGTGGCTCCGTTCGCGACCGTCGGCGGCAGCAGCAGCAG
TACTAACAGCAACCTCCCGCCGGTGACGCCGCGGAATCGAAAGACGGAGG
GGCGGGCAGGGGGCGTAACGGGAACAGCGACGTTCGGCAGCCGGAACACG
TCGTCGGTTTCGAGAAGGCGCGGCAGGAGAGCGGTGGAGATATCGTCCGC
CGTGAAGCTGACCCCGCGGAAACGCAGAGGCGAGAGGAAGTCCTCGCACA
CGAAAAGGAACGGGTCTCGCTGCGCAGACGCCGCGCGACGGGCGAGACAC
CAGCGGGAGACGGAGCGCGGCACGGTCACGGAGACCTCGACCCCCGCGGA
GACGCCGACTGAGAAGGAGGCGGCGGCTACGACCACGCCCGCGACCGAGA
CCCCGAACGAAACCGACGGTACTGGCTGCAGGCGTTCAAAGGGGGAACAC
CGGGGCGCCGCCGGTGGTGGTGGTTGTAGTGGTAGCCGGAGAGCTTCGGG
CCCGCGGAAGATGAAGGAGAAGCCGCGGACGGCCGCGTCACGAATCCTAC
CGAGCCGGACGGATGTGTCGCTCCGGTCGGTGCGGAACATGTTTCAGGTG
GCGGACGCGATGAAGGCGCAGATCCTGGTGAGAGATCGCGTCCACCGGCT
CCGCGTGTACCTGAACTGCTTCTCGGGGAGGGAGGCCGTGCAGTGGATGC
TGGACGGGTGCCACGCGTCATCCGTCATCGAGGCCGAGAGGCTCGGCAAC
GAGATGATGAAAGCCTCCGTTTTCCAGCACATCCTCAACTCCCACGTTTT
CGAGGACTCGTCCGTGTACTACCAGTTCACCGACGGCGAGACGCCGCCCC
CGCCCGCGAGAGGCGGGAAGCGCCTGCGCCAGATCGCGCGCGTTTTCCGC
GGTCACGTTGCCCGAAAGTTCGTGCCCAACGGCGGTGGCACCGCGGGCGC
GAGTCCCGCCTCGGGAGCGAGCGGCGGTTTCGAGCCCAGCGTCATCGCCA
GGGGCGGCAATAACAGCGGAGGCTCCGGCGGGGCTCGGGCGAGTGGTGCG
GGGACCGGCGGCGGCGGTGGCGCCGAGTCCTCATCTTCGGTGCCATCGTC
TCTGAGGAAGCCGCCGAGGCTGCCGAAGTCGAGCGGGATAGACCGGAGCA
AGCACAGGCGGAGTCGGTGTCGGCAGGCGAGCGGAGCGTCGACCATCGGA
TCGCAGGCGCAGCTGCGCAGCTTCGGCAGTAGCATGAGCACGGTCACCGT
GCCCGAGACCCCGTACTAGGTCGGCACGCAGCGCTTCATGGCACCAGAGC
GATTGAAGGGGCGTCCAGCCTCGGCGCAGTCCGACCTTTGGTCCTTCGGG
CTGTCGCTGGCGACGGCGGCGCTCGGCGACGACTTCATGGCGCAGGCGAG
CAACGAGTTCGAGCAGCTCGACCTCGCCGGGCGTGCGCGAAGCACTCTTG
CGAAGGCGACCACCCTATCCGCGGAGCTCAGGGACTTCCTCCACCGGTGC
CTCTCGAGAGACCCGGCGCGCCGACCAGCTCTCCGGGATCTCATGAAGCA
CCCATTCCTGGAGCAGCGACACAACTGGGCAAGCAAGTGCCCCGAAGTGG
CGCTTGCCATGCGCGATCGCAAGCGGCGGCAGCGCGAGGCCGCGACCGCG
CTGAGCACGGACGCGGTGCTCACTGCTCTGTGCGAGGCGCGCGCGGAGGA
CAACCTCATATCGTCAAGGGTGGACACGACGACGGCCGCTGACCTGGCGT
ACGAGCTGGGCGTCACGGCGAAAAGCCTCGTGCGCAACGTCCACAGGCGC
ACGCTGGAGCTAATCCGTGAGCGCGGCGGTGGCCTCGCCGGTGTGAGCGA
CAGCGGCGGGGATAACGGCGACGACGCGGCGGGTCCGGGGTCCGGTCGGT
GTCGAGTCGGCAGCGGCATAGCGAGCGACGCGAGAGCGAGGAGGCGGAGA
AGAAGCGAGAACCGCCGGCGCGGAAACGATAAGGGGGAAGAAAAGAACGC
GGGTGAGGCGGGAGAACACGGGGGGGACTGCGGCTGCGGCTTCGGCGAGG
CCGGCGGAAGCGCCGGAGGTGACAGCGTCGGCCTGGTGATCGAGTCGGAC
GGATCGTGGTCTCCCGTGGGCTCTCCCCCCGTAACGGGGGAGGCGCCCGC
GGATGGGCCACAAATTCTCGCGCCGGTGGCTCCGTTCGCGACCGTCGGCG
GCAGCAGCAGCAGTACTAACAGCAACCTCCCGCCGGTGACGCCGCGGAAT
CGAAAGACGGAGGGGCGGGCAGGGGGCGTAACGGGAACAGCGACGTTCGG
CAGCCGGAACACGTCGTCGGTTTCGAGAAGGCGCGGCAGGAGAGCGGTGG
AGATATCGTCCGCCGTGAAGCTGACCCCGCGGAAACGCAGAGGCGAGAGG
AAGTCCTCGCACACGAAAAGGAACGGGTCTCGCTGCGCAGACGCCGCGCG
ACGGGCGAGACACCAGCGGGAGACGGAGCGCGGCACGGTCACGGAGACCT
CGACCCCCGCGGAGACGCCGACTGAGAAGGAGGCGGCGGCTACGACCACG
CCCGCGACCGAGACCCCGAACGAAACCGACGGTACTGGCTGCAGGCGTTC
AAAGGGGGAACACCGGGGCGCCGCCGGTGGTGGTGGTTGTAGTGGTAGCC
GGAGAGCTTCGGGCCCGCGGAAGATGAAGGAGAAGCCGCGGACGGCCGCG
TCACGAATCCTACCGAGCCGGACGGATGTGTCGCTCCGGTCGGTGCGGAA
CATGTTTCAGGTGGCGGACGCGATGAAGGCGCAGATCCTGGTGAGAGATC
GCGTCCACCGGCTCCGCGTGTACCTGAACTGCTTCTCGGGGAGGGAGGCC
GTGCAGTGGATGCTGGACGGGTGCCACGCGTCATCCGTCATCGAGGCCGA
GAGGCTCGGCAACGAGATGATGAAAGCCTCCGTTTTCCAGCACATCCTCA
ACTCCCACGTTTTCGAGGACTCGTCCGTGTACTACCAGTTCACCGACGGC
GAGACGCCGCCCCCGCCCGCGAGAGGCGGGAAGCGCCTGCGCCAGATCGC
GCGCGTTTTCCGCGGTCACGTTGCCCGAAAGTTCGTGCCCAACGGCGGTG
GCACCGCGGGCGCGAGTCCCGCCTCGGGAGCGAGCGGCGGTTTCGAGCCC
AGCGTCATCGCCAGGGGCGGCAATAACAGCGGAGGCTCCGGCGGGGCTCG
GGCGAGTGGTGCGGGGACCGGCGGCGGCGGTGGCGCCGAGTCCTCATCTT
CGGTGCCATCGTCTCTGAGGAAGCCGCCGAGGCTGCCGAAGTCGAGCGGG
ATAGACCGGAGCAAGCACAGGCGGAGTCGGTGTCGGCAGGCGAGCGGAGC
GTCGACCATCGGATCGCAGGCGCAGCTGCGCAGCTTCGGCAGTAGCATGA
GCACGGTCACCGTGCCCGAGACCCCGTACTAG
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