mRNA_S-dermatodea_contig12203.1382.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig12203.1382.1 vs. uniprot
Match: D8LMV6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMV6_ECTSI) HSP 1 Score: 290 bits (743), Expect = 4.280e-93 Identity = 136/184 (73.91%), Postives = 153/184 (83.15%), Query Frame = 3
Query: 399 PRRVLILPDSRAPVEQRDLWHHHLKARVLA--ENVASTIEDMPDPYAFNTKRYETFWTGFMADELALCPNTLVVAHGTAADAVLRFVETHEIWGAVLVCPGGEMYHAGERHGRAYLWPRIRRGCKWIAVVHATGDPIVGDAEARRVKDALGVPSALFREVAGGQRRLRDRSGHLLEVEEFVASA 944
PRR+LILPD+RA + D WHHHLKA V+ ++V TIEDMPDPY+FNTKRYETFW FMADELAL P TLVVAHGTAADAVLRFVE +E+WGAVLVCPGGEMYHAGERHGRAY+WP +RRGC W+A+VH GDPI+GDAEA R+K ALGVP LFRE GGQ+RLRD +G L EVEE V SA
Sbjct: 44 PRRLLILPDARADLSNPDCWHHHLKANVVVADKDVEVTIEDMPDPYSFNTKRYETFWLNFMADELALDPGTLVVAHGTAADAVLRFVEKYEVWGAVLVCPGGEMYHAGERHGRAYVWPAVRRGCPWLAIVHGNGDPIMGDAEAGRMKGALGVPPLLFREADGGQQRLRDHTGSLREVEELVLSA 227
BLAST of mRNA_S-dermatodea_contig12203.1382.1 vs. uniprot
Match: A0A835YHT6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHT6_9STRA) HSP 1 Score: 113 bits (282), Expect = 2.690e-25 Identity = 73/188 (38.83%), Postives = 96/188 (51.06%), Query Frame = 3
Query: 465 HLKARVLAENVASTIEDMPDPYAFNTKRYETFWTGFM--ADELALCPNTLVVAHGTAADAVLRFVETHEIWGAVLVCPGGEMYHAGERHGRAYLWPRIRRGCKW----------------IAVVHATGDPIVGDAEARRVKDALGVPSALFREVAGGQ--RRLRDRSGHLLEVEEFVASALAHTSPAS 968
H+ +R A T +PD YAFN KRYE FW G M A EL + P+TLV+A G AADA LR++E ++ GA+LV G++YHA ERHGRAY W +IR C +A+ + G G E R V+ AL VP ALF G R D+S +L + L + A+
Sbjct: 34 HIVSRGWAPEAIRTGH-LPDIYAFNNKRYERFWLGLMGSAQELHITPHTLVIAAGAAADATLRYIERSQVHGAILV-NAGDLYHAAERHGRAYAWAQIRANCDGGXXXXXXXXXXXXXARVALAYGEG----GLEEGRAVQAALRVPEALFVTAPGADAARSAADQSAAVLSAATMLFDRLCAATAAA 215
BLAST of mRNA_S-dermatodea_contig12203.1382.1 vs. uniprot
Match: A0A7S0DJF2_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DJF2_9EUKA) HSP 1 Score: 99.0 bits (245), Expect = 1.210e-19 Identity = 54/146 (36.99%), Postives = 80/146 (54.79%), Query Frame = 3
Query: 405 RVLILPDSRAPVEQRDLWHHHLKARVLAENVASTIEDMPDPYAFNTKRYETFWT----GFMADELALCPNTLVVAHGTAADAVLRFVETHEIWGAVLVCPGGEMYHAGERHGRAYLWPRIRRGCKWIAVVHATGDPIVGDAEARRV 830
R++I+P ++ W+ ++ A V ++ +P+PY TKR+E W F DE NT++V HG+ A+A LRFVE H + G LV G+ Y+AGERHGR Y W ++R K+I + H+ DP+ EAR V
Sbjct: 100 RIVIVPHNKFSQGGAGTWYQSVQDSFPAGTV-ELMKGLPNPYETMTKRWERTWIDAMRSFTPDE-----NTILVGHGSGAEAALRFVEDHPVLGLCLVATPGDEYYAGERHGRLYRWGSVKRNSKFIDLFHSLDDPMGKIEEARNV 239
BLAST of mRNA_S-dermatodea_contig12203.1382.1 vs. uniprot
Match: A0A5A9NSR0_9TELE (Putative hydrolase RBBP9 n=1 Tax=Triplophysa tibetana TaxID=1572043 RepID=A0A5A9NSR0_9TELE) HSP 1 Score: 73.6 bits (179), Expect = 1.410e-11 Identity = 46/153 (30.07%), Postives = 78/153 (50.98%), Query Frame = 3
Query: 402 RRVLILPDSRAPVEQRDLWHHHLKARVLA-ENVASTIEDMPDPYAFNTKRYETFWTGFMADELALCPNTLVVAHGTAADAVLRFVETHEIWGAVLVCP-----GGEMYHAGERHGRAYLWPRIRRGCKWIAVVHATGDPIVGDAEARRVKDAL 842
+RV+I+P + A + W+ LK R+ +++ +++MPDP T R E+ W FM +L +T+++ H + A A +R+ ETH+++G +LV G E R + W +IR K+I +T DP + E + V D L
Sbjct: 4 KRVVIVPGNGAGDMEHCNWYGWLKKRINEMSDLSCAMKNMPDPV---TAR-ESVWLPFMEKDLKCDEDTVIIGHSSGASAAMRYSETHQVFGLILVGAYTSDLGDENERESGYFSRPWEWEKIRSNVKYIIQFGSTDDPFLPWEEQQEVADGL 152
BLAST of mRNA_S-dermatodea_contig12203.1382.1 vs. uniprot
Match: A0A5J4Z4B6_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4B6_PORPP) HSP 1 Score: 72.8 bits (177), Expect = 5.850e-11 Identity = 45/137 (32.85%), Postives = 67/137 (48.91%), Query Frame = 3
Query: 456 WHHHLKARVLAENVASTIEDMPDPYAFNTKRYETFWTGFMADELAL-CPNTLVVAHGTAADAVLRFVETHEIW-----GAVLVCPGGEMYHAGERHGRAYLWPRIRR--GCKWIAVVHATGDPIVGDAEARRVKDAL 842
W+ L V A S + +P Y N+KR+E W + L+ T+++AHG+ ADA+LR +E I G VL+ P +YHAGERH R+Y RI + G +V++ DP E + + L
Sbjct: 62 WYDTLA--VDASTEVSVLRGLPYLYDSNSKRWERVWLEELKQHLSFGTDKTIIIAHGSGADALLRLLEEEAIGADVRVGVVLIAPTTRLYHAGERHPRSYRVMRIAKNVGRNKFFIVYSDNDPFASQTECEALCEDL 196
BLAST of mRNA_S-dermatodea_contig12203.1382.1 vs. uniprot
Match: A0A0B6YAK9_9EUPU (Uncharacterized protein n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6YAK9_9EUPU) HSP 1 Score: 68.9 bits (167), Expect = 5.950e-10 Identity = 41/142 (28.87%), Postives = 69/142 (48.59%), Query Frame = 3
Query: 456 WHHHLKARVLAENVASTIEDMPDPYAFNTKRYETFWTGFMADELALCPNTLVVAHGTAADAVLRFVETHEIWGAVLVCP-----GGEMYHAGERHGRAYLWPRIRRGCKWIAVVHATGDPIVGDAEARRVKDALGVPSALFR 866
W+ + ++ V ++ +MPDP E+ W FM EL +T++V H + A+A +R+ ETH+++G VLV G + A + R + W +I+ + IA + DP + +E V LG S LF+
Sbjct: 25 WYGWISNKLKHAGVQCSLRNMPDPITAK----ESVWLPFMEKELGCDQHTIIVGHSSGAEAAMRYAETHQVYGIVLVSACVTDLGIDNERASGYYNRPWDWEKIKVNSQIIAQFGSVDDPFIPWSEQEEVAKGLG--SNLFK 160
BLAST of mRNA_S-dermatodea_contig12203.1382.1 vs. uniprot
Match: A0A2G4JHP8_9BACT (Alpha/beta hydrolase n=1 Tax=Acidobacterium sp. TaxID=1872119 RepID=A0A2G4JHP8_9BACT) HSP 1 Score: 66.2 bits (160), Expect = 4.790e-9 Identity = 44/136 (32.35%), Postives = 67/136 (49.26%), Query Frame = 3
Query: 450 DLWHHHLKARVLAENVASTIEDMPDPYAFNTKRYETFWTGFMADELALCPNTLVVAHGTAADAVLRFVETHEIWGAVLV--CPG--GEMYHAGERHGR-AYLWPRIRRGCKWIAVVHATGDPIVGDAEARRVKDAL 842
D W L+ +V A V PD N K + W ++ + L T++V H + A A +R+ ETH++ G+VLV C G+ A + R + W RIR +W+ + H+T DP++ AEAR V L
Sbjct: 16 DHWLPWLERQVTALGVDVINHTFPD----NVKARASVWLPYL-ESLDADEETILVGHSSGAVAAMRYAETHQLLGSVLVSVCHTDLGDACEAASGYYRDPWQWRRIRENQQWVGIFHSTDDPLIPIAEARHVAAQL 146
BLAST of mRNA_S-dermatodea_contig12203.1382.1 vs. uniprot
Match: A0A7S0ZB27_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZB27_9RHOD) HSP 1 Score: 60.5 bits (145), Expect = 1.510e-7 Identity = 29/85 (34.12%), Postives = 50/85 (58.82%), Query Frame = 3
Query: 453 LWHHHLKARVLAEN--VASTIEDMPDPYAFNTKRYETFWTGFMADEL----ALCPNTLVVAHGTAADAVLRFVETHEIWGAVLVC 689
+W+ LK + E+ S + + P+PY N+KR+E W F+ L + + +++ HG+ ADAVLR++E H + GAV++C
Sbjct: 43 IWYCWLKDILEKESNLSVSILNEFPNPYESNSKRWERIWMEFLHQNLIKFKSNSDSVILIGHGSGADAVLRYLEEHSVDGAVIIC 127
BLAST of mRNA_S-dermatodea_contig12203.1382.1 vs. uniprot
Match: A0A0D2MXD3_9CHLO (PCI domain-containing protein (Fragment) n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MXD3_9CHLO) HSP 1 Score: 63.5 bits (153), Expect = 2.990e-7 Identity = 48/165 (29.09%), Postives = 71/165 (43.03%), Query Frame = 3
Query: 399 PRRVLILPDSRAPVEQRDLWHHHLKARV-LAENVASTIEDMPDPYAFNTKRYETFWTGFMADELALCPNTLVVAHGTAADAVLRFVETHEIWGA-----------VLVCP-----GGEMYHAGERHGRAYLWPRIRRGCKWIAVVHATGDPIVGDAEARRVKDAL 842
P RV+ILP + + W+ L R+ + + +MPDP E+ W FMA EL + +T+VV H + A A +RF ET + G VLV G E+ R + W +IR ++ +T DP + AE + V D L
Sbjct: 3 PVRVVILPGNGSGSVYNANWYGWLHQRLHKPPAITCVLRNMPDPVGAR----ESIWLPFMAGELGVGQDTVVVGHSSGAAAAMRFAETKRVAGKHRVLCDLGGSLVLVSAYTSDQGDELEARSGYFNRPWEWDKIRSNAGFVVQFGSTDDPFLPWAEQQEVADGL 163
BLAST of mRNA_S-dermatodea_contig12203.1382.1 vs. uniprot
Match: A0A7S1J1P9_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J1P9_9EUGL) HSP 1 Score: 58.5 bits (140), Expect = 1.770e-5 Identity = 43/150 (28.67%), Postives = 71/150 (47.33%), Query Frame = 3
Query: 399 PRRVLILPDSRAPVEQRDLWHHHLKARVLAENVASTIEDMPDPYAFNTKRYETFWTGFMADELALCPNTLVVAHGTAADAVLRFVETHEIWGAVLVCPGGEMYHAGERHGRAYLWPRIRRGCKWIAVVHATGDPIVGDAEARRVKDALGV 848
P + LPD R + R ++ A + + MP+ Y + +ET W ++ L L LV+AHG+AA+AVLR++E + + +L+ P + Y AG R Y + I+ C ++ T P A+ ++ ALGV
Sbjct: 200 PLDAIFLPDQRD--KDRGWFYAAFFAGLRDRDTELEAVPMPNIYQKEEESWETLWLTYLQGMLILGERELVLAHGSAAEAVLRYMEENPLQAVILIDPPAK-YKAGTAAERDYRYSDIKANCPNCKLMILTLTP-QATADMLVLQKALGV 345 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12203.1382.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig12203.1382.1 >prot_S-dermatodea_contig12203.1382.1 ID=prot_S-dermatodea_contig12203.1382.1|Name=mRNA_S-dermatodea_contig12203.1382.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=246bp MSFSRRPFNCRAAVVLALAVAVAVLPSSRSRVCAFTASGGSAAATKQRAIback to top mRNA from alignment at S-dermatodea_contig12203:2593..5682- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig12203.1382.1 ID=mRNA_S-dermatodea_contig12203.1382.1|Name=mRNA_S-dermatodea_contig12203.1382.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3090bp|location=Sequence derived from alignment at S-dermatodea_contig12203:2593..5682- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig12203:2593..5682- >mRNA_S-dermatodea_contig12203.1382.1 ID=mRNA_S-dermatodea_contig12203.1382.1|Name=mRNA_S-dermatodea_contig12203.1382.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1476bp|location=Sequence derived from alignment at S-dermatodea_contig12203:2593..5682- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |