mRNA_S-dermatodea_contig1217.1354.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1217.1354.1 vs. uniprot
Match: A0A6H5KNT1_9PHAE (Carrier domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KNT1_9PHAE) HSP 1 Score: 206 bits (525), Expect = 7.110e-59 Identity = 100/126 (79.37%), Postives = 116/126 (92.06%), Query Frame = 1
Query: 82 SLLEALDFWAEQSPSKTAMTFVDDAGTDIDSLTYSDVQRRSSALASHLLEGLGLTRGSTCLLVYTPSLDFTVAYLACLRAGVIAVPCFPPDPRRLKKDLDMFTAIQGSSGATVALTSRSYNYAKKV 459
SLL A+D+WAE++PSKTA+TF+DDAG ++D+LTYS V RRS+ALASHLL+ LGL +GSTCLLVY P LDFTVAYLACLRAGVIAVPC+PPDPRRLKKDL MF AIQGSSGATVALT+R+YNYAKK+
Sbjct: 6 SLLGAIDYWAEKTPSKTALTFLDDAGAEVDALTYSSVLRRSNALASHLLDKLGLVKGSTCLLVYPPCLDFTVAYLACLRAGVIAVPCYPPDPRRLKKDLHMFKAIQGSSGATVALTNRNYNYAKKM 131
BLAST of mRNA_S-dermatodea_contig1217.1354.1 vs. uniprot
Match: A0A6A5ALQ8_9STRA (AMP-binding domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ALQ8_9STRA) HSP 1 Score: 146 bits (368), Expect = 2.070e-41 Identity = 77/141 (54.61%), Postives = 95/141 (67.38%), Query Frame = 1
Query: 64 MAKRSGSLLEALDFWAEQSPSKTAMTFVDDAGTDIDSLTYSDVQRRSSALASHLL-------EGLGLTRGSTCLLVYTPSLDFTVAYLACLRAGVIAVPCFPPDPRRLKKDLDMFTAIQGSSGATVALTSRSYNYAKKVCA 465
M ++L LD WA P K FVDD G DS+TY DVQ RSS LA +L +GLGL++G LLVY P LDF VA+LACLRAGV+AVP +PPDPR+L+KD+ MFT + ++GA VALT+ +YNYAKKV A
Sbjct: 1 MIMADNTVLGRLDHWATVQPKKNLFAFVDDNGQVTDSVTYDDVQSRSSNLAKWMLTSPSVSSKGLGLSKGDIVLLVYPPGLDFIVAFLACLRAGVVAVPVYPPDPRKLRKDIAMFTTVCSNAGAKVALTNSTYNYAKKVVA 141
BLAST of mRNA_S-dermatodea_contig1217.1354.1 vs. uniprot
Match: A0A7S2HQ97_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HQ97_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.810e-40 Identity = 80/139 (57.55%), Postives = 100/139 (71.94%), Query Frame = 1
Query: 58 TAMAKRSGSLLEALDFWAEQSPSKTAMTFVDDAGTDIDSLTYSDVQRRSSALASHLL-----EGLGLTRGSTCLLVYTPSLDFTVAYLACLRAGVIAVPCFPPDPRRLKKDLDMFTAIQGSSGATVALTSRSYNYAKKV 459
T M+ +LLEALD W++ P K TF+DD GT++D+LTY D+ +S+ALA HLL G GL G LLVY PSLDF A+ ACLRAG+IAVP FPPD R+ KKDL MF+AIQ SSGA VALT++++NYAKK+
Sbjct: 3 TEMSGSGRTLLEALDHWSKVQPDKLLHTFLDDHGTEVDTLTYKDLLDKSAALAQHLLAPTRQNGAGLKPGDRALLVYLPSLDFITAFYACLRAGIIAVPVFPPDVRKAKKDLYMFSAIQSSSGALVALTNKTFNYAKKL 141
BLAST of mRNA_S-dermatodea_contig1217.1354.1 vs. uniprot
Match: A0A7S2HQA0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HQA0_9STRA) HSP 1 Score: 154 bits (388), Expect = 2.230e-40 Identity = 80/139 (57.55%), Postives = 100/139 (71.94%), Query Frame = 1
Query: 58 TAMAKRSGSLLEALDFWAEQSPSKTAMTFVDDAGTDIDSLTYSDVQRRSSALASHLL-----EGLGLTRGSTCLLVYTPSLDFTVAYLACLRAGVIAVPCFPPDPRRLKKDLDMFTAIQGSSGATVALTSRSYNYAKKV 459
T M+ +LLEALD W++ P K TF+DD GT++D+LTY D+ +S+ALA HLL G GL G LLVY PSLDF A+ ACLRAG+IAVP FPPD R+ KKDL MF+AIQ SSGA VALT++++NYAKK+
Sbjct: 3 TEMSGSGRTLLEALDHWSKVQPDKLLHTFLDDHGTEVDTLTYKDLLDKSAALAQHLLAPTRQNGAGLKPGDRALLVYLPSLDFITAFYACLRAGIIAVPVFPPDVRKAKKDLYMFSAIQSSSGALVALTNKTFNYAKKL 141
BLAST of mRNA_S-dermatodea_contig1217.1354.1 vs. uniprot
Match: A0A6G0XHZ7_9STRA (Carrier domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHZ7_9STRA) HSP 1 Score: 149 bits (376), Expect = 6.420e-39 Identity = 78/143 (54.55%), Postives = 96/143 (67.13%), Query Frame = 1
Query: 52 PPTAMAKRSGSLLEALDFWAEQSPSKTAMTFVDDAGTDIDSLTYSDVQRRSSALASHLL-------EGLGLTRGSTCLLVYTPSLDFTVAYLACLRAGVIAVPCFPPDPRRLKKDLDMFTAIQGSSGATVALTSRSYNYAKKV 459
P +++ K +LLE LD W P K FVDD G +DSLTY DV RSS LA L+ +GLGL RG LLVY P LDF V +LACLRAGV+AVP +PPDPR+L+KD+ MF + ++GA VALT++SYNYAKKV
Sbjct: 8 PQSSIFKMEKTLLERLDHWTSHHPDKNLYEFVDDNGRVVDSLTYKDVHARSSNLAKWLVTSPNVSSKGLGLARGERVLLVYPPGLDFIVTFLACLRAGVVAVPVYPPDPRKLRKDIVMFATVCSNTGAKVALTNKSYNYAKKV 150
BLAST of mRNA_S-dermatodea_contig1217.1354.1 vs. uniprot
Match: W4FD50_9STRA (Carrier domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FD50_9STRA) HSP 1 Score: 146 bits (368), Expect = 8.590e-38 Identity = 77/141 (54.61%), Postives = 95/141 (67.38%), Query Frame = 1
Query: 64 MAKRSGSLLEALDFWAEQSPSKTAMTFVDDAGTDIDSLTYSDVQRRSSALASHLL-------EGLGLTRGSTCLLVYTPSLDFTVAYLACLRAGVIAVPCFPPDPRRLKKDLDMFTAIQGSSGATVALTSRSYNYAKKVCA 465
M ++L LD WA P K FVDD G DS+TY DVQ RSS LA +L +GLGL++G LLVY P LDF VA+LACLRAGV+AVP +PPDPR+L+KD+ MFT + ++GA VALT+ +YNYAKKV A
Sbjct: 1 MIMADNTVLGRLDHWATVQPKKNLFAFVDDNGQVTDSVTYDDVQSRSSNLAKWMLTSPSVSSKGLGLSKGDIVLLVYPPGLDFIVAFLACLRAGVVAVPVYPPDPRKLRKDIAMFTTVCSNAGAKVALTNSTYNYAKKVVA 141
BLAST of mRNA_S-dermatodea_contig1217.1354.1 vs. uniprot
Match: A0A024U0U6_9STRA (Carrier domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U0U6_9STRA) HSP 1 Score: 143 bits (361), Expect = 7.280e-37 Identity = 74/132 (56.06%), Postives = 90/132 (68.18%), Query Frame = 1
Query: 85 LLEALDFWAEQSPSKTAMTFVDDAGTDIDSLTYSDVQRRSSALASHLL-------EGLGLTRGSTCLLVYTPSLDFTVAYLACLRAGVIAVPCFPPDPRRLKKDLDMFTAIQGSSGATVALTSRSYNYAKKV 459
+L LD WA P K FVDD G DSL Y DV RS+ LA +L +GLGL+RG LLVY P LDF VA+LACLRAGV+AVP +PPDPR+L+KD+ MFT + +SGA +ALT+ +YNYAKKV
Sbjct: 5 VLGRLDHWAAHQPKKNLFAFVDDNGRVTDSLLYEDVHTRSANLAKWMLTSPSVSSQGLGLSRGDIVLLVYPPGLDFIVAFLACLRAGVVAVPVYPPDPRKLRKDIVMFTTVCSNSGAKIALTNSAYNYAKKV 136
BLAST of mRNA_S-dermatodea_contig1217.1354.1 vs. uniprot
Match: A0A7S1C448_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C448_9STRA) HSP 1 Score: 142 bits (359), Expect = 1.590e-36 Identity = 73/128 (57.03%), Postives = 91/128 (71.09%), Query Frame = 1
Query: 85 LLEALDFWAEQSPSKTAMTFVDDAGTDIDSLTYSDVQRRSSALASHLL----EGLGLTRGSTCLLVYTPSLDFTVAYLACLRAGVIAVPCFPPDPRRLKKDLDMFTAIQGSSGATVALTSRSYNYAKK 456
LL AL WA P K T++ D G + LTY DV+ ++ LA H+L EGLG+ +G LLVY PSLDF VA+LACLRAGV+AVP +PPDPRRLKK++ MF +IQ SSGA VALTS+ YN+AK+
Sbjct: 19 LLPALRHWASTQPDKVLFTYLGDDGEETRRLTYGDVEAQTRRLAQHILSNTAEGLGVGQGDRVLLVYPPSLDFIVAFLACLRAGVVAVPVYPPDPRRLKKNMYMFASIQASSGARVALTSKQYNWAKR 146
BLAST of mRNA_S-dermatodea_contig1217.1354.1 vs. uniprot
Match: A0A835Z9C9_9STRA (AMP-binding domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9C9_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.030e-34 Identity = 63/123 (51.22%), Postives = 84/123 (68.29%), Query Frame = 1
Query: 82 SLLEALDFWAEQSPSKTAMTFVDDAGTDIDSLTYSDVQRRSSALASHLLEGLGLTRGSTCLLVYTPSLDFTVAYLACLRAGVIAVPCFPPDPRRLKKDLDMFTAIQGSSGATVALTSRSYNYA 450
S+LEALD WA +PSK F+DD G + T+ +Q S ++A HL L L +G LLVY PSLDF VA+L CL AG++AVP +PPDP +L++DL F A+ SSGA+VALTS +Y++A
Sbjct: 2 SVLEALDHWAAATPSKAVFIFLDDQGNSTCTHTFLSLQAASRSVADHLTGPLQLRKGDRALLVYPPSLDFIVAFLGCLAAGIVAVPVYPPDPSKLRQDLVAFAAVAASSGASVALTSSAYSHA 124
BLAST of mRNA_S-dermatodea_contig1217.1354.1 vs. uniprot
Match: A0A485LHG9_9STRA (Aste57867_21441 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LHG9_9STRA) HSP 1 Score: 133 bits (334), Expect = 3.660e-33 Identity = 67/132 (50.76%), Postives = 88/132 (66.67%), Query Frame = 1
Query: 85 LLEALDFWAEQSPSKTAMTFVDDAGTDIDSLTYSDVQRRSSALASHLL-------EGLGLTRGSTCLLVYTPSLDFTVAYLACLRAGVIAVPCFPPDPRRLKKDLDMFTAIQGSSGATVALTSRSYNYAKKV 459
+L LD W P K FVDD G +SL Y DV RS+ +A ++ +GLGL RG LLV+ P LDF VA+LACLRAGV+AVP +PPDPR+++KD+ MFT + ++GA +ALT+ +YNYAKKV
Sbjct: 8 VLGRLDHWHATQPDKNLFAFVDDNGRVTESLKYKDVHARSTNMAKWMVTNPSVSSKGLGLARGDKVLLVFPPGLDFIVAFLACLRAGVVAVPVYPPDPRKIRKDIVMFTTVCSNAGAKIALTNSTYNYAKKV 139 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1217.1354.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1217.1354.1 >prot_S-dermatodea_contig1217.1354.1 ID=prot_S-dermatodea_contig1217.1354.1|Name=mRNA_S-dermatodea_contig1217.1354.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=155bp QQLPPIHSRTSGSPRPDPPTAMAKRSGSLLEALDFWAEQSPSKTAMTFVDback to top mRNA from alignment at S-dermatodea_contig1217:21592..22056+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1217.1354.1 ID=mRNA_S-dermatodea_contig1217.1354.1|Name=mRNA_S-dermatodea_contig1217.1354.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=465bp|location=Sequence derived from alignment at S-dermatodea_contig1217:21592..22056+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1217:21592..22056+ >mRNA_S-dermatodea_contig1217.1354.1 ID=mRNA_S-dermatodea_contig1217.1354.1|Name=mRNA_S-dermatodea_contig1217.1354.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=930bp|location=Sequence derived from alignment at S-dermatodea_contig1217:21592..22056+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |