mRNA_S-dermatodea_contig12163.1349.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig12163.1349.1 vs. uniprot
Match: D8LHK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHK8_ECTSI) HSP 1 Score: 107 bits (266), Expect = 8.910e-25 Identity = 70/167 (41.92%), Postives = 78/167 (46.71%), Query Frame = 1
Query: 1 MAEAIELALKFLPLDAAPMALIVTDGVMDYCPPMTYDGLSMRLCRQDVT--------------------------------------------------------------RGGCETDRRGADDRPHSGGYAMARKFRVPDLNGLAHLVSVSGGCFFDLETLHGVVA 315
MA+AI LALKFLPLDAAP+AL+VTDG++DY P YDGLSMRLCR DV G ETDR PH YA ARK RVPDL+GLAHLV V+GG FDLETL +A
Sbjct: 490 MADAIVLALKFLPLDAAPIALVVTDGLVDYPSPTEYDGLSMRLCRHDVAVSCLLMDRMGERADVGVXXXXXXXXXATTASSVAVLPSGNRGATAVGRWLPAAAAAGGVGGAMGRYETDRVDISFAPHGEAYAAARKHRVPDLSGLAHLVGVTGGWLFDLETLEAELA 656
BLAST of mRNA_S-dermatodea_contig12163.1349.1 vs. uniprot
Match: A0A6H5KTQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTQ7_9PHAE) HSP 1 Score: 105 bits (263), Expect = 2.300e-24 Identity = 71/168 (42.26%), Postives = 79/168 (47.02%), Query Frame = 1
Query: 1 MAEAIELALKFLPLDAAPMALIVTDGVMDYCPPMTYDGLSMRLCRQDVT--------------------------------------------------------RGGC-------ETDRRGADDRPHSGGYAMARKFRVPDLNGLAHLVSVSGGCFFDLETLHGVVA 315
MA+AI LALKFLPLDAAP+AL+VTDG++DY P YDGLSMRLCR DV GG ETDR PH YA ARK RVPDL+GLAHLV V+GG FDLETL +A
Sbjct: 482 MADAIVLALKFLPLDAAPIALVVTDGLVDYPSPTEYDGLSMRLCRHDVAVSCLLMDRMGERADVGVGGGVXXXXXXXXXXSSVAVLPSGNRGATAVGRWLPAAAAAGGVGGAIGRYETDRVDISFAPHGEAYAAARKHRVPDLSGLAHLVGVTGGWLFDLETLEAELA 649
BLAST of mRNA_S-dermatodea_contig12163.1349.1 vs. uniprot
Match: A0A836C7M7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7M7_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 1.420e-10 Identity = 43/104 (41.35%), Postives = 56/104 (53.85%), Query Frame = 1
Query: 7 EAIELALKFLPLDAAPMALIVTDGVMDYCPPMTYDGLSMRLCRQD-----VTRGGCETDRRGADDR-PHSGGYAMARKFRVPDLNGLAHLVSVSGGCFFDLETL 300
+A ALKFLP DAAP+A+++TDGV + YD L M+LCR D + G C A P S + F VPD+ GLAH+ +GG + DLE L
Sbjct: 300 QAAAFALKFLPFDAAPLAVVLTDGVGERPSSCAYDSLLMQLCRHDTPVHCIQVGACFAATAPASPADPQSVMPCLPFGF-VPDVEGLAHMCFTTGGEYLDLEAL 402
BLAST of mRNA_S-dermatodea_contig12163.1349.1 vs. uniprot
Match: T0QNR9_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QNR9_SAPDV) HSP 1 Score: 63.2 bits (152), Expect = 2.330e-9 Identity = 39/94 (41.49%), Postives = 53/94 (56.38%), Query Frame = 1
Query: 22 ALKFLPLDAAPMALIVTDGVMDYCPPMTYDGLSMRLCRQDVTRGGCETDRRGADDRPH-SGGYAMARKFRVPDLNGLAHLVSVSGGCFFDLETL 300
AL LP DAAP+ ++VTDGV+D YD + M+L R +T C + G PH S GY VPD + L ++ + +GG FFD+ETL
Sbjct: 241 ALNSLPHDAAPLLVLVTDGVVDLPHVYAYDHMMMQLARHHIT---CHAIQLGGGFVPHCSFGY-------VPDTDLLRYVTAATGGAFFDMETL 324
BLAST of mRNA_S-dermatodea_contig12163.1349.1 vs. uniprot
Match: A0A067D4Z2_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D4Z2_SAPPC) HSP 1 Score: 62.8 bits (151), Expect = 3.180e-9 Identity = 39/99 (39.39%), Postives = 55/99 (55.56%), Query Frame = 1
Query: 22 ALKFLPLDAAPMALIVTDGVMDYCPPMTYDGLSMRLCRQDVTRGGCETDRRGADDRPH-SGGYAMARKFRVPDLNGLAHLVSVSGGCFFDLETLHGVVA 315
AL LP DAAP+ ++VTDGV+D YD + M+L R +T C + G PH S GY VPD + L ++ + +GG FFD++TL + A
Sbjct: 239 ALNSLPHDAAPLLVLVTDGVVDLPHVYAYDHMMMQLARHHIT---CHAIQLGGGFVPHCSFGY-------VPDTDLLRYVTAATGGAFFDMQTLSSLPA 327
BLAST of mRNA_S-dermatodea_contig12163.1349.1 vs. uniprot
Match: A0A1V9YH17_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YH17_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 8.080e-9 Identity = 39/99 (39.39%), Postives = 54/99 (54.55%), Query Frame = 1
Query: 22 ALKFLPLDAAPMALIVTDGVMDYCPPMTYDGLSMRLCRQDVTRGGCETDRRGADDRPH-SGGYAMARKFRVPDLNGLAHLVSVSGGCFFDLETLHGVVA 315
AL LP DAAP+ ++VTDGV+D YD + M+L R +T C + G PH S GY VPD + L ++ + +GG FFD+ TL + A
Sbjct: 242 ALNSLPHDAAPLLVLVTDGVVDLPHVYAYDHMMMQLARHHIT---CHAIQLGGGFVPHCSFGY-------VPDTDLLRYVTAATGGAFFDMHTLSALHA 330 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12163.1349.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig12163.1349.1 >prot_S-dermatodea_contig12163.1349.1 ID=prot_S-dermatodea_contig12163.1349.1|Name=mRNA_S-dermatodea_contig12163.1349.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=105bp MAEAIELALKFLPLDAAPMALIVTDGVMDYCPPMTYDGLSMRLCRQDVTRback to top mRNA from alignment at S-dermatodea_contig12163:4759..5145+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig12163.1349.1 ID=mRNA_S-dermatodea_contig12163.1349.1|Name=mRNA_S-dermatodea_contig12163.1349.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=387bp|location=Sequence derived from alignment at S-dermatodea_contig12163:4759..5145+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig12163:4759..5145+ >mRNA_S-dermatodea_contig12163.1349.1 ID=mRNA_S-dermatodea_contig12163.1349.1|Name=mRNA_S-dermatodea_contig12163.1349.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=630bp|location=Sequence derived from alignment at S-dermatodea_contig12163:4759..5145+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |