mRNA_S-dermatodea_contig12160.1348.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig12160.1348.1 vs. uniprot
Match: A0A6H5KU75_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU75_9PHAE) HSP 1 Score: 144 bits (364), Expect = 2.340e-38 Identity = 75/94 (79.79%), Postives = 81/94 (86.17%), Query Frame = 1
Query: 1 QVQGFAMMALLFAIIGLAFEPLHRNAGMLMTLYSLTFFFSNFGPNSTTFMLPSLTFPDQVRGSLNGISAAAGKFGALIGSLMFRPAVAKFGVGP 282
QVQGF MALLFA+IGL+F L R+A +LM LYSLTFFFSNFGPNSTTFMLPSLTFPDQVR SLNGISAAAGK GAL GSLMF+PA +GVGP
Sbjct: 388 QVQGFLAMALLFAVIGLSFHSLGRHADILMLLYSLTFFFSNFGPNSTTFMLPSLTFPDQVRSSLNGISAAAGKLGALAGSLMFKPAAETWGVGP 481
BLAST of mRNA_S-dermatodea_contig12160.1348.1 vs. uniprot
Match: A0A7S3PUP1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PUP1_9STRA) HSP 1 Score: 109 bits (273), Expect = 3.440e-27 Identity = 54/93 (58.06%), Postives = 72/93 (77.42%), Query Frame = 1
Query: 1 QVQGFAMMALLFAIIGLAFEPLHRNAGMLMTLYSLTFFFSNFGPNSTTFMLPSLTFPDQVRGSLNGISAAAGKFGALIGSLMFRPAVAKFGVG 279
Q+QGF +MA+L++II + + L ++ +L+ LY TFFFSN+GPN+TTFMLPSLTF + R +LNGISAA+GK GALIGS+MF P K+G G
Sbjct: 198 QLQGFVIMAILYSIIAVTWNVLTQHHSLLVILYGSTFFFSNYGPNTTTFMLPSLTFSPECRSTLNGISAASGKAGALIGSIMFEPVARKYGDG 290
BLAST of mRNA_S-dermatodea_contig12160.1348.1 vs. uniprot
Match: A0A7S1RY98_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RY98_ALECA) HSP 1 Score: 107 bits (268), Expect = 3.910e-27 Identity = 52/85 (61.18%), Postives = 68/85 (80.00%), Query Frame = 1
Query: 1 QVQGFAMMALLFAIIGLAFEPLHRNAGMLMTLYSLTFFFSNFGPNSTTFMLPSLTFPDQVRGSLNGISAAAGKFGALIGSLMFRP 255
Q+QGFAMMA+L+ I+GL + + NA +L+ +Y LT+FFSNFGPNSTTF+LPS TFP +VR SLNG+ AA GK GA++GS F+P
Sbjct: 80 QLQGFAMMAVLYLILGLFLDRMKNNAILLLFIYGLTYFFSNFGPNSTTFILPSETFPYEVRSSLNGVCAATGKLGAVVGSAGFKP 164
BLAST of mRNA_S-dermatodea_contig12160.1348.1 vs. uniprot
Match: A0A1Q9DZ37_SYMMI (Inorganic phosphate transporter 1-6 n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DZ37_SYMMI) HSP 1 Score: 110 bits (274), Expect = 4.210e-26 Identity = 53/91 (58.24%), Postives = 68/91 (74.73%), Query Frame = 1
Query: 1 QVQGFAMMALLFAIIGLAFEPLHRNAGMLMTLYSLTFFFSNFGPNSTTFMLPSLTFPDQVRGSLNGISAAAGKFGALIGSLMFRPAVAKFG 273
QVQGFA MA+L+A++ + EP+ L+ +Y LT+FFSNFGPNSTTF+LPS TFP +VR +LNG AA GK GA++GS MF+P V FG
Sbjct: 461 QVQGFAFMAVLYAVLAIWMEPMEDYPATLLLVYGLTYFFSNFGPNSTTFILPSETFPTEVRSTLNGFCAACGKLGAVVGSSMFKPLVGAFG 551
BLAST of mRNA_S-dermatodea_contig12160.1348.1 vs. uniprot
Match: A0A7S0FP90_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FP90_9STRA) HSP 1 Score: 101 bits (252), Expect = 3.950e-25 Identity = 51/93 (54.84%), Postives = 70/93 (75.27%), Query Frame = 1
Query: 1 QVQGFAMMALLFAIIGLAFEPLHRNAGMLMTLYSLTFFFSNFGPNSTTFMLPSLTFPDQVRGSLNGISAAAGKFGALIGSLMFRPAVAKFGVG 279
Q+QGFA+MA+L+A+IG+ +E L +L+ LY TFFF+N+GPN+TTF+LPS+T+ R +LNGISAAAGK GAL+G+ +F PA G G
Sbjct: 64 QMQGFALMAVLYALIGVFWESLTHMQVLLVLLYGSTFFFANYGPNATTFLLPSVTYSHNCRSTLNGISAAAGKMGALLGASVFEPAADILGDG 156
BLAST of mRNA_S-dermatodea_contig12160.1348.1 vs. uniprot
Match: A0A7S4TAR6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4TAR6_9STRA) HSP 1 Score: 105 bits (262), Expect = 6.250e-25 Identity = 49/91 (53.85%), Postives = 70/91 (76.92%), Query Frame = 1
Query: 1 QVQGFAMMALLFAIIGLAFEPLHRNAGMLMTLYSLTFFFSNFGPNSTTFMLPSLTFPDQVRGSLNGISAAAGKFGALIGSLMFRPAVAKFG 273
Q+QGF +M++++ +IGL F+ L + +L+ LY+ TFFFSN+GPNSTTFMLPS+TF R +LNGI AA GK GAL+G+++F PA ++G
Sbjct: 215 QMQGFLVMSIIYCVIGLKFDSLSESKALLLGLYASTFFFSNYGPNSTTFMLPSMTFSRACRSTLNGICAACGKIGALLGTILFVPASGRYG 305
BLAST of mRNA_S-dermatodea_contig12160.1348.1 vs. uniprot
Match: A0A7S4TAR7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4TAR7_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.790e-24 Identity = 49/91 (53.85%), Postives = 70/91 (76.92%), Query Frame = 1
Query: 1 QVQGFAMMALLFAIIGLAFEPLHRNAGMLMTLYSLTFFFSNFGPNSTTFMLPSLTFPDQVRGSLNGISAAAGKFGALIGSLMFRPAVAKFG 273
Q+QGF +M++++ +IGL F+ L + +L+ LY+ TFFFSN+GPNSTTFMLPS+TF R +LNGI AA GK GAL+G+++F PA ++G
Sbjct: 407 QMQGFLVMSIIYCVIGLKFDSLSESKALLLGLYASTFFFSNYGPNSTTFMLPSMTFSRACRSTLNGICAACGKIGALLGTILFVPASGRYG 497
BLAST of mRNA_S-dermatodea_contig12160.1348.1 vs. uniprot
Match: A0A7S3W7B3_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3W7B3_9SPIT) HSP 1 Score: 104 bits (260), Expect = 3.070e-24 Identity = 54/88 (61.36%), Postives = 66/88 (75.00%), Query Frame = 1
Query: 1 QVQGFAMMALLFAIIGLAFEPLHRNAG---MLMTLYSLTFFFSNFGPNSTTFMLPSLTFPDQVRGSLNGISAAAGKFGALIGSLMFRP 255
Q+QGF +MA+ FA +GLA+E L +A ++ LY LTFFFSNFGPNSTTF+LPS TFP +VR +LNG SAA GK GA IGS F+P
Sbjct: 352 QMQGFLLMAITFATLGLAYEQLELSAAGRIAMLFLYGLTFFFSNFGPNSTTFILPSETFPQEVRSTLNGFSAACGKLGATIGSSSFKP 439
BLAST of mRNA_S-dermatodea_contig12160.1348.1 vs. uniprot
Match: A0A813GKY1_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GKY1_POLGL) HSP 1 Score: 104 bits (259), Expect = 3.430e-24 Identity = 51/91 (56.04%), Postives = 67/91 (73.63%), Query Frame = 1
Query: 1 QVQGFAMMALLFAIIGLAFEPLHRNAGMLMTLYSLTFFFSNFGPNSTTFMLPSLTFPDQVRGSLNGISAAAGKFGALIGSLMFRPAVAKFG 273
Q+QGF MMA+L+ +GL + L NA +LM +Y LT+FFS+FGPNSTTF+LPS +FP +VR SLNG AA GK GA +GS F+P ++ G
Sbjct: 345 QLQGFVMMAVLYGALGLWMDDLEGNAAVLMLIYGLTYFFSSFGPNSTTFILPSESFPREVRSSLNGFCAAMGKLGATVGSACFKPIISAAG 435
BLAST of mRNA_S-dermatodea_contig12160.1348.1 vs. uniprot
Match: A0A7S2V487_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V487_9STRA) HSP 1 Score: 103 bits (257), Expect = 4.210e-24 Identity = 56/93 (60.22%), Postives = 69/93 (74.19%), Query Frame = 1
Query: 1 QVQGFAMMALLFAIIGLAFEPLHR-NAGMLMTLYSLTFFFSNFGPNSTTFMLPSLTFPDQVRGSLNGISAAAGKFGALIGSLMFRPAVAKFGV 276
Q+QGF +MALL+A+IGL + L R + L+ LY LTF FSNFGPNSTTF+LPSLTFP + R SLNGI AA GK GA++GS F P ++GV
Sbjct: 294 QLQGFVLMALLYALIGLFWNALDRVSPTALLLLYGLTFLFSNFGPNSTTFVLPSLTFPARGRSSLNGICAAMGKLGAIVGSSCFSPLSEEWGV 386 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12160.1348.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig12160.1348.1 >prot_S-dermatodea_contig12160.1348.1 ID=prot_S-dermatodea_contig12160.1348.1|Name=mRNA_S-dermatodea_contig12160.1348.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=88bp MMALLFAIIGLAFEPLHRNAGMLMTLYSLTFFFSNFGPNSTTFMLPSLTFback to top mRNA from alignment at S-dermatodea_contig12160:3614..6391- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig12160.1348.1 ID=mRNA_S-dermatodea_contig12160.1348.1|Name=mRNA_S-dermatodea_contig12160.1348.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2778bp|location=Sequence derived from alignment at S-dermatodea_contig12160:3614..6391- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig12160:3614..6391- >mRNA_S-dermatodea_contig12160.1348.1 ID=mRNA_S-dermatodea_contig12160.1348.1|Name=mRNA_S-dermatodea_contig12160.1348.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=528bp|location=Sequence derived from alignment at S-dermatodea_contig12160:3614..6391- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |