mRNA_S-dermatodea_contig12145.1335.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig12145.1335.1 vs. uniprot
Match: D7G1C2_ECTSI (Iron-sulfur cluster assembly protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1C2_ECTSI) HSP 1 Score: 191 bits (486), Expect = 4.990e-61 Identity = 96/99 (96.97%), Postives = 98/99 (98.99%), Query Frame = 1
Query: 1 GLVGAPACGDVMKLQIKVDENGVIIESKFKTFGCGSAIASSSVATEWLKGRSVDDSLKIKNTDIAGHLKLPPVKLHCSMLAEDAIKAAIKDLQDKGAIA 297
GLVGAPACGDVMKLQIKVDENGVI ESKFKTFGCGSAIASSSVATEWLKGRSVD+SLKIKNTDIAGHLKLPPVKLHCSMLAEDAIKAAIKDLQDKGA+A
Sbjct: 42 GLVGAPACGDVMKLQIKVDENGVITESKFKTFGCGSAIASSSVATEWLKGRSVDESLKIKNTDIAGHLKLPPVKLHCSMLAEDAIKAAIKDLQDKGAVA 140
BLAST of mRNA_S-dermatodea_contig12145.1335.1 vs. uniprot
Match: A0A6G0XIV5_9STRA (Iron-sulfur cluster assembly protein n=2 Tax=Eukaryota TaxID=2759 RepID=A0A6G0XIV5_9STRA) HSP 1 Score: 171 bits (433), Expect = 6.720e-53 Identity = 83/95 (87.37%), Postives = 90/95 (94.74%), Query Frame = 1
Query: 1 GLVGAPACGDVMKLQIKVDENGVIIESKFKTFGCGSAIASSSVATEWLKGRSVDDSLKIKNTDIAGHLKLPPVKLHCSMLAEDAIKAAIKDLQDK 285
GLVGAPACGDVMKLQI+VDENG II+SKFKTFGCGSAIASSSVATEWLKG++VDD L IKNTDIA HLKLPPVKLHCSMLAEDAIKAA++D +DK
Sbjct: 52 GLVGAPACGDVMKLQIEVDENGTIIDSKFKTFGCGSAIASSSVATEWLKGKNVDDCLSIKNTDIANHLKLPPVKLHCSMLAEDAIKAAVQDYKDK 146
BLAST of mRNA_S-dermatodea_contig12145.1335.1 vs. uniprot
Match: A0A024TZZ4_9STRA (Iron-sulfur cluster assembly protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TZZ4_9STRA) HSP 1 Score: 170 bits (431), Expect = 1.310e-52 Identity = 83/99 (83.84%), Postives = 92/99 (92.93%), Query Frame = 1
Query: 1 GLVGAPACGDVMKLQIKVDENGVIIESKFKTFGCGSAIASSSVATEWLKGRSVDDSLKIKNTDIAGHLKLPPVKLHCSMLAEDAIKAAIKDLQDKGAIA 297
GLVGAPACGDVMKLQI+VDENG II+SKFKTFGCGSAIASSSVATEWLKG++VD+ L IKNTDIA HLKLPPVKLHCSMLAEDAIKAA++D +DK +A
Sbjct: 51 GLVGAPACGDVMKLQIEVDENGTIIDSKFKTFGCGSAIASSSVATEWLKGKNVDECLNIKNTDIASHLKLPPVKLHCSMLAEDAIKAAVQDYKDKQKVA 149
BLAST of mRNA_S-dermatodea_contig12145.1335.1 vs. uniprot
Match: A0A1Z5JMQ2_FISSO (Iron-sulfur cluster assembly protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JMQ2_FISSO) HSP 1 Score: 170 bits (431), Expect = 2.100e-52 Identity = 83/97 (85.57%), Postives = 91/97 (93.81%), Query Frame = 1
Query: 1 GLVGAPACGDVMKLQIKVDENGVIIESKFKTFGCGSAIASSSVATEWLKGRSVDDSLKIKNTDIAGHLKLPPVKLHCSMLAEDAIKAAIKDLQDKGA 291
GLVGAPACGDVMKLQIKVDENG+I ESKFKTFGCGSAIASSSVATEW+KG+SVD+ L IKN+DIA HLKLPPVKLHCSMLAEDAIKAA+KD ++K A
Sbjct: 57 GLVGAPACGDVMKLQIKVDENGIITESKFKTFGCGSAIASSSVATEWVKGKSVDEVLSIKNSDIASHLKLPPVKLHCSMLAEDAIKAAVKDWKEKSA 153
BLAST of mRNA_S-dermatodea_contig12145.1335.1 vs. uniprot
Match: A0A024GP90_9STRA (Iron-sulfur cluster assembly protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GP90_9STRA) HSP 1 Score: 169 bits (429), Expect = 3.510e-52 Identity = 83/95 (87.37%), Postives = 89/95 (93.68%), Query Frame = 1
Query: 1 GLVGAPACGDVMKLQIKVDENGVIIESKFKTFGCGSAIASSSVATEWLKGRSVDDSLKIKNTDIAGHLKLPPVKLHCSMLAEDAIKAAIKDLQDK 285
GLVGAPACGDVMKLQIKVDENG I++SKFKTFGCGSAIASSSVATEWLKGR+VD+ + IKNTDIA HLKLPPVKLHCSMLAEDAIKAAIKD + K
Sbjct: 64 GLVGAPACGDVMKLQIKVDENGKIVDSKFKTFGCGSAIASSSVATEWLKGRTVDECISIKNTDIASHLKLPPVKLHCSMLAEDAIKAAIKDYKKK 158
BLAST of mRNA_S-dermatodea_contig12145.1335.1 vs. uniprot
Match: A0A1V9YMH2_9STRA (Iron-sulfur cluster assembly protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YMH2_9STRA) HSP 1 Score: 169 bits (428), Expect = 3.530e-52 Identity = 81/95 (85.26%), Postives = 89/95 (93.68%), Query Frame = 1
Query: 1 GLVGAPACGDVMKLQIKVDENGVIIESKFKTFGCGSAIASSSVATEWLKGRSVDDSLKIKNTDIAGHLKLPPVKLHCSMLAEDAIKAAIKDLQDK 285
GLVGAPACGDVMKLQI+VDENG I++SKFKTFGCGSAIASSSVATEWLKG+++DD LKIKNTDIA HLKLPPVKLHCSMLAEDAIKAA+ D + K
Sbjct: 50 GLVGAPACGDVMKLQIEVDENGTIVDSKFKTFGCGSAIASSSVATEWLKGKNIDDCLKIKNTDIASHLKLPPVKLHCSMLAEDAIKAAVNDYKKK 144
BLAST of mRNA_S-dermatodea_contig12145.1335.1 vs. uniprot
Match: K3XAL1_GLOUD (Iron-sulfur cluster assembly protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAL1_GLOUD) HSP 1 Score: 169 bits (428), Expect = 4.540e-52 Identity = 84/99 (84.85%), Postives = 91/99 (91.92%), Query Frame = 1
Query: 1 GLVGAPACGDVMKLQIKVDENGVIIESKFKTFGCGSAIASSSVATEWLKGRSVDDSLKIKNTDIAGHLKLPPVKLHCSMLAEDAIKAAIKDLQDKGAIA 297
GLVGAPACGDVMKLQI+VDENG I++SKFKTFGCGSAIASSSVATEWLKG++V++ LKIKNTDIA HLKLPPVKLHCSMLAEDAIKAAI D Q K A A
Sbjct: 58 GLVGAPACGDVMKLQIEVDENGTIVDSKFKTFGCGSAIASSSVATEWLKGKTVEECLKIKNTDIASHLKLPPVKLHCSMLAEDAIKAAISDYQKKQASA 156
BLAST of mRNA_S-dermatodea_contig12145.1335.1 vs. uniprot
Match: G4ZR66_PHYSP (Iron-sulfur cluster assembly protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZR66_PHYSP) HSP 1 Score: 168 bits (426), Expect = 8.320e-52 Identity = 83/95 (87.37%), Postives = 89/95 (93.68%), Query Frame = 1
Query: 1 GLVGAPACGDVMKLQIKVDENGVIIESKFKTFGCGSAIASSSVATEWLKGRSVDDSLKIKNTDIAGHLKLPPVKLHCSMLAEDAIKAAIKDLQDK 285
GLVGAPACGDVMKLQI+VDE+G I++SKFKTFGCGSAIASSSVATEWLKGRSVD+ LKIKNTDIA HLKLPPVKLHCSMLAEDAIKAAI D + K
Sbjct: 56 GLVGAPACGDVMKLQIQVDEHGTIVDSKFKTFGCGSAIASSSVATEWLKGRSVDECLKIKNTDIAAHLKLPPVKLHCSMLAEDAIKAAISDYKRK 150
BLAST of mRNA_S-dermatodea_contig12145.1335.1 vs. uniprot
Match: A0A1V9ZYA9_9STRA (Iron-sulfur cluster assembly protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYA9_9STRA) HSP 1 Score: 168 bits (425), Expect = 9.480e-52 Identity = 82/95 (86.32%), Postives = 88/95 (92.63%), Query Frame = 1
Query: 1 GLVGAPACGDVMKLQIKVDENGVIIESKFKTFGCGSAIASSSVATEWLKGRSVDDSLKIKNTDIAGHLKLPPVKLHCSMLAEDAIKAAIKDLQDK 285
GLVGAPACGDVMKLQI+VDENG II SKFKTFGCGSAIASSSVATEWLKG++VD+ LKIKNTDIA HLKLPPVKLHCSMLAEDAIKAA+ D + K
Sbjct: 48 GLVGAPACGDVMKLQIEVDENGTIINSKFKTFGCGSAIASSSVATEWLKGKNVDECLKIKNTDIASHLKLPPVKLHCSMLAEDAIKAAVNDYKSK 142
BLAST of mRNA_S-dermatodea_contig12145.1335.1 vs. uniprot
Match: A0A835YL97_9STRA (Iron-sulfur cluster assembly protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL97_9STRA) HSP 1 Score: 168 bits (426), Expect = 1.330e-51 Identity = 82/99 (82.83%), Postives = 92/99 (92.93%), Query Frame = 1
Query: 1 GLVGAPACGDVMKLQIKVDENGVIIESKFKTFGCGSAIASSSVATEWLKGRSVDDSLKIKNTDIAGHLKLPPVKLHCSMLAEDAIKAAIKDLQDKGAIA 297
GLVGAPACGDVMKLQI+VDENGVI E+KFKTFGCGSAIASSSVATEWLKG+++D+SL I+NTDIA HLKLPPVKLHCSMLAEDAIKAA++D + K A A
Sbjct: 58 GLVGAPACGDVMKLQIRVDENGVITETKFKTFGCGSAIASSSVATEWLKGKTIDESLSIRNTDIAAHLKLPPVKLHCSMLAEDAIKAAVRDYKAKRAAA 156 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12145.1335.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig12145.1335.1 >prot_S-dermatodea_contig12145.1335.1 ID=prot_S-dermatodea_contig12145.1335.1|Name=mRNA_S-dermatodea_contig12145.1335.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=99bp GLVGAPACGDVMKLQIKVDENGVIIESKFKTFGCGSAIASSSVATEWLKGback to top mRNA from alignment at S-dermatodea_contig12145:4602..6291- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig12145.1335.1 ID=mRNA_S-dermatodea_contig12145.1335.1|Name=mRNA_S-dermatodea_contig12145.1335.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1690bp|location=Sequence derived from alignment at S-dermatodea_contig12145:4602..6291- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig12145:4602..6291- >mRNA_S-dermatodea_contig12145.1335.1 ID=mRNA_S-dermatodea_contig12145.1335.1|Name=mRNA_S-dermatodea_contig12145.1335.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=594bp|location=Sequence derived from alignment at S-dermatodea_contig12145:4602..6291- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |