mRNA_S-dermatodea_contig1214.1333.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig1214.1333.1
Unique NamemRNA_S-dermatodea_contig1214.1333.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig1214.1333.1 vs. uniprot
Match: A0A6H5JD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD90_9PHAE)

HSP 1 Score: 690 bits (1781), Expect = 8.200e-220
Identity = 387/680 (56.91%), Postives = 485/680 (71.32%), Query Frame = 1
Query:    4 GTIAAGTISVLTVLGVVIVSAGSLVRSSSGDGSDSSSG---------SRGIDSLVSATESAAYSGGGEGSRRHVSTRRPSATLAVLLLTQLQFLATLSLVDFTVGKDSLLADFLVGLRWVNLWWPADITEDVTPRSCVDETGVSDIGIPVFVGNLVLVVVILMGIFLVHVTVISAVEAYWLSKRRANANLAAARLRGTPVSELRARADYGKRIRRTLPEPDGSTSGTHPSAPDASGGIFRRKQKGQGSTLTPHSPECQLPLDDDSDGDEEHGKVIIP--AENRLNPVAECREHSRSAWLHFPHVELLFLFFAFEGAVASQASVIRTADCPEVFYTAVVVLLLFPILMFVMVWRTIWVRVRPNVLIVFNAYD-DGANQDAPNGRGNFL*RFKTSWSEDYSLFSWADKGQWETVETNN*QAVRDGNWFRIGFEPVFVDYTKSGTWFVVISLVEWAAIACVGVVIDNSVVQLLSFCGIQLVMFIILVWLRPFANRVKNTMAACLVAIDAVSVALQAISALRWDGTRKAQRVDTTVGILQLVELCVLVIPIYLDATTILMGAIRGRLRK-IG-----VEGKAREARDYIRSYTRRHWCGTWCIMLRHNIFACARDTREGHMFIPPAPFCHVELRRPRVLTTAARAGPYPPLGSSNGPDN-----GVLRRPNDDAIGTVNTPVLV 1974
            GTIAAG +S+  ++G+++VS GS+VRS+ G+GS SS+G         SRG+     A      +G G+   R VS RRPSATLA +L+TQLQFLA LSLVD+ V + S LADF+VGLRW+NLWWPADI ED+    C+ ETG S+IG  VFVGNL LV+ IL+ IF +HV V+S  EA WL+K+RA  NL  AR R TP+SEL AR   G+ IR+T P       G    +P AS                  +P         +D +EE G+ ++P  +ENRL+PVA CREHS SAWLHFPHVEL+FLFFAFEGAVAS AS IR ++CPE+FYTA+  ++L+P+LMF  V RT++VRVRP+ L++F  YD DG N + PNGRG FL RFK+SW+E+YSLFSWADKGQWETV+T N    R+G+WFRIGFEPVFVDYTK GTWF+VISLVEWA+IA VGV+IDNS VQLL FCG+Q  MF+ILV L+PFAN V N + AC+VAIDAV   L A++AL+W+GT +A  V++ VG+LQ+V LC LVIP+YLDA TI+MGAIR R+RK +G     + G++ EARDYIR++TRR WCGTWC MLRHN+FACARDTR+G             +R+P +LT AAR+GPYPPL  S GPD      G  RRP+ +AIGTV+TPV+V
Sbjct: 1344 GTIAAGAVSIFALIGIMVVSTGSIVRSNHGNGSVSSAGGAGGASADGSRGLVDTAGAIAPVGETGEGDSPPR-VSHRRPSATLAFVLMTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPADIGEDIASDGCIFETGASEIGALVFVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRIIRQTNP-------GLTDPSPFAS-----------------RNPSLVRDGSQRTD-EEEGGRELVPMCSENRLSPVAMCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNTPNGRGGFLSRFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSYVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVCTGLLAVAALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRKRIRKALGKTGQQLTGESPEARDYIRTFTRRQWCGTWCAMLRHNVFACARDTRDG-------------VRKPHLLT-AARSGPYPPLDKSIGPDGTEGDGGPPRRPSFNAIGTVHTPVVV 1983          
BLAST of mRNA_S-dermatodea_contig1214.1333.1 vs. uniprot
Match: D7FWS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS4_ECTSI)

HSP 1 Score: 663 bits (1710), Expect = 9.760e-217
Identity = 373/683 (54.61%), Postives = 476/683 (69.69%), Query Frame = 1
Query:    4 GTIAAGTISVLTVLGVVIVSAGSLVRSSSGDGSDSSSGSR----------GIDSLVSATESAAYSGGGEGSRRHVSTRRPSATLAVLLLTQLQFLATLSLVDFTVGKDSLLADFLVGLRWVNLWWPADITEDVTPRSCVDETGVSDIGIPVFVGNLVLVVVILMGIFLVHVTVISAVEAYWLSKRRANANLAAARLRGTPVSELRARADYGKRIRRTLPEPDGSTSGTHPSAPDASGGIFRRKQKGQGSTLTPHSPECQLPLDDDSDGDEEHGKVIIP--AENRLNPVAECREHSRSAWLHFPHVELLFLFFAFEGAVASQASVIRTADCPEVFYTAVVVLLLFPILMFVMVWRTIWVRVRPNVLIVFNAY-DDGANQDAPNGRGNFL*RFKTSWSEDYSLFSWADKGQWETVETNN*QAVRDGNWFRIGFEPVFVDYTKSGTWFVVISLVEWAAIACVGVVIDNSVVQLLSFCGIQLVMFIILVWLRPFANRVKNTMAACLVAIDAVSVALQAISALRWDGTRKAQRVDTTVGILQLVELCVLVIPIYLDATTILMGAIRGRLRK-IGVEG-----KAREARDYIRSYTRRHWCGTWCIMLRHNIFACARDTREGHMFIPPAPFCHVELRRPRVLTTAARAGPYPPL-------GSSNGPDNGVLRRPNDDAIGTVNTPVLV 1974
            GT AAG +S+L ++G+++VS GS++RS+ G+GS                 G+   V     A  +  GE +  H S RRPSATLA +L+TQLQFLATLSLVD+ + +DS LADF+ GLRW+NLWWPA++ +++    C  E G S IG  VFVGNL LV+ IL+ IF +HV  +S VEA WL+K+RA  NL AAR RG P+ EL+AR   G+ I RT P+     +   P A        R+  +  G+  T H  E       D   +EE G+ ++P  +ENRL+PVA CREHS SAWLHFPHVEL+FLFFAFEGAVAS AS IR ++CPE+FYTA+  ++L+P+LMFV V+RT+ VRVRPNVL++F  Y +DG N DAP+  G  L RFK+SW+E+YSLFSWADKGQWETV+T + Q  R+G+WFRIGFEPVFVDYTK GTWF+VISLVEWAA A VGV+I+NSVVQL+ FCG+  VMF IL++L+PFAN V N + AC+ AIDA+S+ + A SAL W+GT +A  ++T+V +LQL+ L  LVIP+YLDA TI+MGAIR R+RK +G  G     + REAR YIRSYTRR WCGTWC MLRHN+FACARDT EG             +R+PR  TTAAR+GPYPPL       G+ +G   G  RRP+ +A+GT NTPV+V
Sbjct: 1114 GTTAAGAVSILALIGILVVSTGSVIRSNRGNGSXXXXXXXXXXXXXXXXXGLSGTVDPLTPADGTAEGE-NPPHASNRRPSATLAFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWPAEVGQNIASDECAFEAGASGIGALVFVGNLALVIGILLAIFFMHVAAVSGVEALWLTKKRARENLDAARRRGAPIGELQARLRGGRIICRTNPD----LADPSPFA--------RQAPQPSGTPSTLHEEES------DMSDEEEGGRGLVPMRSENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNVLLIFKTYAEDGTNGDAPSRAGGLLSRFKSSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWAAFAFVGVMIENSVVQLVLFCGLHSVMFFILMFLKPFANSVINNIEACVTAIDAISMGVFAASALWWEGTNRAAHLNTSVVVLQLLSLFALVIPVYLDAVTIVMGAIRNRIRKALGKTGHELTDEEREARHYIRSYTRRQWCGTWCTMLRHNVFACARDTSEG-------------VRKPR-FTTAARSGPYPPLDRSKQAGGTEDG--GGPPRRPSCNAVGTANTPVIV 1761          
BLAST of mRNA_S-dermatodea_contig1214.1333.1 vs. uniprot
Match: D8LLG6_ECTSI (Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI)

HSP 1 Score: 671 bits (1732), Expect = 3.750e-213
Identity = 379/680 (55.74%), Postives = 476/680 (70.00%), Query Frame = 1
Query:    4 GTIAAGTISVLTVLGVVIVSAGSLVRSSSGDGSDSSSGSRGIDSLVSATESAAYSGGG-------EG-SRRHVSTRRPSATLAVLLLTQLQFLATLSLVDFTVGKDSLLADFLVGLRWVNLWWPADITEDVTPRSCVDETGVSDIGIPVFVGNLVLVVVILMGIFLVHVTVISAVEAYWLSKRRANANLAAARLRGTPVSELRARADYGKRIRRTLPEPDGSTSGTHPSAPDASGGIFRRKQKGQGSTLTPHSPECQLPLDDDSDGDEEHGKVIIP--AENRLNPVAECREHSRSAWLHFPHVELLFLFFAFEGAVASQASVIRTADCPEVFYTAVVVLLLFPILMFVMVWRTIWVRVRPNVLIVFNAYD-DGANQDAPNGRGNFL*RFKTSWSEDYSLFSWADKGQWETVETNN*QAVRDGNWFRIGFEPVFVDYTKSGTWFVVISLVEWAAIACVGVVIDNSVVQLLSFCGIQLVMFIILVWLRPFANRVKNTMAACLVAIDAVSVALQAISALRWDGTRKAQRVDTTVGILQLVELCVLVIPIYLDATTILMGAIRGRLRK-IG------VEGKAREARDYIRSYTRRHWCGTWCIMLRHNIFACARDTREGHMFIPPAPFCHVELRRPRVLTTAARAGPYPPLGSSNGPDN-----GVLRRPNDDAIGTVNTPVLV 1974
            GT AAG +S+  ++G+++VS GS+VRS+ G+GS SS+                            EG S   VS RRPSATLA +L+TQLQFLA LSLVD+ V + S LADF+VGLRW+NLWWPA+I ED+    C+ ETG S+IG  VFVGNL LV+ IL+ IF +HV V+S  EA WL+K+RA  NL  AR R TP+SEL AR   G+ IRRT P       G    +P  S      + + Q +                   +EE G+ ++P  +EN+L+PVA CREHS SAWLHFPHVEL+FLFFAFEGAVAS AS IR ++CPE+FYTA+  ++L+P+LMF  V RT++VRVRP+ L++F  YD DG N +APN RG FL  FK+SW+E+YSLFSWADKGQWETV+T N    R+G+WFRIGFEPVFVDYTK GTWF+VISLVEWA+IA VGV+IDNS VQLL FCG+Q  MF+ILV L+PFAN V N + AC+VAIDAVS  L A++AL+W+GT +A  V++ VG+LQ+V LC LVIP+YLDA TI+MGAIR R+RK +G      ++G++ EARDYIR++TRR WCGTWC MLRHN+FACARDTREG             +R+P +LT AAR+GPYPPL  S GPD      G  RRP+ +AIGTV+TPV+V
Sbjct: 1303 GTTAAGAVSIFALIGIMVVSTGSIVRSNHGNGSVSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGDSPSRVSHRRPSATLAFVLMTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPAEIGEDIVSDGCIFETGASEIGALVFVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRMIRRTNP-------GLTDPSPFGSRNPSLVRDRSQRTD------------------EEEGGRGLVPMCSENQLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNAPNCRGGFLSHFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSNVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVSTGLLAVAALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRNRIRKALGKTGQQQLKGESPEARDYIRTFTRRQWCGTWCAMLRHNVFACARDTREG-------------VRKPHLLT-AARSGPYPPLDKSIGPDGTEGDGGPPRRPSFNAIGTVHTPVVV 1943          
BLAST of mRNA_S-dermatodea_contig1214.1333.1 vs. uniprot
Match: A0A6H5JR60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR60_9PHAE)

HSP 1 Score: 566 bits (1459), Expect = 3.980e-191
Identity = 328/657 (49.92%), Postives = 428/657 (65.14%), Query Frame = 1
Query:    4 GTIAAGTISVLTVLGVVIVSAGSLVRSSSGDGSDSSSGSRGIDSLVSA-------TESAAYSGGGEGSRRH---VSTRRPSATLAVLLLTQLQFLATLSLVDFTVGKDSLLADFLVGLRWVNLWWPADITEDVTPRSCVDETGVSDIGIPVFVGNLVLVVVILMGIFLVHVTVISAVEAYWLSKRRANANLAAARLRGTPVSELRARADYGKRIRRTLPEPDGSTSGTHPSAPDASGGIFRRKQKGQGSTLTPHSPECQLPLDDDSDGDEEHGKVIIPAENRLNPVAECREHSRSAWLHFPHVELLFLFFAFEGAVASQASVIRTADCPEVFYTAVVVLLLFPILMFVMVWRTIWVRVRPNVLIVFNAYDDGANQ-DAPNGRGNFL*RFKTSWSEDYSLFSWADKGQWETVETNN*QAVRDGNWFRIGFEPVFVDYTKSGTWFVVISLVEWAAIACVGVVIDNSVVQLLSFCGIQLVMFIILVWLRPFANRVKNTMAACLVAIDAVSVALQAISALRWDGTRKAQRVDTTVGILQLVELCVLVIPIYLDATTILMGAIRGRLRKIGVEGKAREARDYIRSYTRRHWCGTWCIMLRHNIFACARDTREGHMFIPPAPFCHVELRRPRVLTTAARAGPYPPLGSSNGP----DNGVLRR 1929
            GT AAG +++L ++G++++S GS++RS+ G+ S +S GS   DS + A       +  A     G   R +    S RRPSATL  +L+TQLQFLATLSLVD+ + +DS LADF+ GLRW+NLWW A++ +++       E G S I   VFVGN+ LV  IL+ IF +HV  +S VEA WL+K+ A  NL AAR RG P+ EL+AR    + I RT P+     S     AP ASG +         STL     E +  + D+ +G    G+V + +ENRLNPVA CREHS SAWLHFPHVEL+F FFAFEGAVAS AS IR  +CP++FYTA+  ++L P+LMFV V+RT+ VRVRPNVL++F  Y +G    DAP+  G FL RFK+SW E+YSLFSWADK QWET +T + Q  R+G+W RIGFEPVFV+YTK GTWF+VISLVEW A+A VGV+++NS+VQL+ FCG+  V+F+IL++L+PFAN V N + AC+ AIDA+S+ + A SAL W+GT +A  ++T+V +LQL+ L                              + REARDYIRSYTRR WCGTWC +L HN+FACARDT EG             +R+PR  TTAAR+GPYPPL  S       DNG+  R
Sbjct:  133 GTTAAGAVTILALIGILVISTGSVIRSNRGNDSSASCGSGSGDSFLGAPVAFRARSVDALAPADGTAERENPPPASNRRPSATLTFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWLAEVGQNIASDESAFEAGASGIRALVFVGNVALVKGILLAIFFIHVAAVSGVEALWLTKKPARENLDAARRRGAPIGELQARLRGVRIICRTNPDL-ADPSPFSRQAPHASGTL---------STLN----EEESDMSDEEEGG--RGRVPMRSENRLNPVATCREHSTSAWLHFPHVELVFQFFAFEGAVASFASAIRNYECPKIFYTAIAAMVLCPLLMFVTVFRTLLVRVRPNVLLIFKTYAEGGTSGDAPSRAGGFLSRFKSSWEENYSLFSWADKRQWETAQTPDRQISREGDWCRIGFEPVFVEYTKRGTWFIVISLVEWVALALVGVMVENSIVQLVLFCGLPSVIFLILMFLKPFANSVTNNIEACVTAIDAISMGVFAASALWWEGTDRAAHLNTSVVVLQLLSLF----------------------------DEEREARDYIRSYTRRQWCGTWCTVLGHNVFACARDTSEG-------------VRKPR-FTTAARSGPYPPLDRSKQAGGTEDNGIRVR 731          
BLAST of mRNA_S-dermatodea_contig1214.1333.1 vs. uniprot
Match: D8LN93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN93_ECTSI)

HSP 1 Score: 456 bits (1173), Expect = 1.830e-141
Identity = 292/632 (46.20%), Postives = 366/632 (57.91%), Query Frame = 1
Query:  217 ATLAVLLLTQLQFLATLSLVDFTVGKDSLLADFLVGLRWVNLWWPADITEDVTPRS-------------------CVDETGVSDIGIPVFVGNLVLVVVILMGIFLVHVTVISAVEAYWLSKRRANANLAAARLRGTPVSELRA--RADYGKRIRRTLPEPDGSTSG-----------------THPSAPDASG-GIFRRKQK-------------GQGSTLTPHSPECQLPLDDD------SDGDEEHGK---VIIPAENRLNPVAECREHSRSAWLHFPHVELLFLFFAFEGAVASQASVIRTADCPEVFYTAVVVLLLFPILMFVMVWRTIWVRVRPNVLIVFN---AYDD-GANQDAPNGR----GNFL*RFKTSWSEDYSLFSWADKGQWETVETNN*QAVRDGNWFRIGFEPVFVDYTKSGTWFVVISLVEWAAIACVGVVIDNSVVQLLSFCGIQLVMFIILVWLRPFANRVKNTMAACLVAIDAVSVALQAISALRWDGTRKAQRVDTTVGILQLVELCVLVIPIYLDATTILMGAIRGRLRKIG------VEGKAREARD-YIRSYTRRHWCGTWCIMLRHNIFACARDTREGHMFIPPAPFCHVELRRPRVLTTAARAGPYP 1884
            A L  + +TQLQFLATLSLVD T G+DS L  F    RW NLW PA   E+    S                   C  +  +  +G  VF+GN  LV   L+ IFL+HV+++S VEAYWL+K+RA    A AR  G  + E  +    D  +  +  +PEPD   SG                   PS  +A+  G  RR +K               GS +     + +   DD+      SD DEE G     +  AE+RL+PVAECREHSRSAWLHFPHVEL+FLFFA+EGAVASQ S +R A CP V   A + L+ +PILMFV V RT +VRVRPN LIVF    A DD G   DA  G+     +FL + +  W ED+SLF+WA+KG WET ET+N    R+G WFRIGFEP+FVD+TKSG WFV  +LVEWAA+ C+G +ID SV+QL  FC +  + F++LV  RPFAN V N M A LV IDAV +AL A+SA RW+GT  A +VD+ V +LQL  LC L+IPIY+D + IL+GAIR RL+K        V  +A +  D ++R + RR W  TWC ML  NIFACA DTREG   I P      E R       AAR GP+P
Sbjct:  758 AILGAVAVTQLQFLATLSLVDDTGGEDSSLPGFADSFRWANLWPPASFAEEFIDTSDEGQQRRLXXXXXXXXXXGCSWDGSLGGLGSLVFIGNQGLVFGALVLIFLLHVSLVSGVEAYWLAKKRAKEEAARARRLGVSIGEYFSDTHVDGREHEQAPVPEPDARPSGGTTDISVASSFRRRRLRRDPSLLNAAATGSQRRLEKLPALDAPHRSRKVRDGSWVAEDGEKKEARSDDNLSGTDCSDYDEEGGGGLGTLTRAESRLSPVAECREHSRSAWLHFPHVELVFLFFAYEGAVASQVSALREAGCPPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTLIVFTPKEADDDTGDAGDAEEGQRARSASFLSKVRAGWEEDHSLFAWANKGTWETAETDNEGTRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANSVINAMGAGLVGIDAVCMALLAVSASRWEGTAAAGKVDSVVMLLQLFALCALIIPIYIDTSLILIGAIRSRLQKSTTTTPQHVRTEAEKEEDLFVRHFIRRSWPRTWCTMLGKNIFACASDTREG---IRPPGTSMAEDRLATSTARAARTGPFP 1386          
BLAST of mRNA_S-dermatodea_contig1214.1333.1 vs. uniprot
Match: D7G1L9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI)

HSP 1 Score: 427 bits (1097), Expect = 2.250e-138
Identity = 258/589 (43.80%), Postives = 350/589 (59.42%), Query Frame = 1
Query:  193 HVSTRRPSATLAVLLLTQLQFLATLSLVDFTVGKDSLLADFLVGLRWVNLWWPADITEDVTP-----------RSC-VDETGVSDIGIPVFVGNLVLVVVILMGIFLVHVTVISAVEAYWLSKRRANANLAAARLRGTPVSELRARADYGKRIRRTLPEPDGSTSGTHPSAPDASGGIFRRKQKGQGSTLTPHSPECQLPLDDDSDGDEEHGKVIIPAENRLNPV----AECREHSRSAWLHFPHVELLFLFFAFEGAVASQASVIRTADCPEVFYTAVVVLLLFPILMFVMVWRTIWVRVRPNVLIVFNAYDDGANQ--DAPNGRGNFL*RFKTSWSEDYSLFSWADKGQWETVETNN*QAVRDGNWFRIGFEPVFVDYTKSGTWFVVISLVEWAAIACVGVVIDNSVVQLLSFCGIQLVMFIILVWLRPFANRVKNTMAACLVAIDAVSVALQAISALRWDGTRKAQRVDTTVGILQLVELCVLVIPIYLDATTILMGAIRGRLRKIG---------VEGKAREARDYIRSYTRRHWCGTWCIMLRHNIFACARDTREGHMFIPPAPFCHVELRRPRVLTTAARAGP 1878
            HVS R PS T+AVLLLTQ+QFLATLSLVD T  +DSLL++    LRWVNLW P  +    +            R+C ++ T  SDIG  VF+GN+ L   +L+GI ++H+ ++SAVEAYWLSK RA   L  A+ RG P+  L AR     R  R    PD  +     +A  ++ G   R+     S          + +D + DG        IP  +R   +    A+CR  S S WL+FPH+ELLFL FAFEGA+ASQ + +R   CP VFY+A   L+++P+LM ++ +RT  VRV P+ LIVF    +  N   D    R +FL + +T   ED+S+F+WA+ G WETVET + + VR+G+ FRIGFEP+FVD+TK  +WF V  L+E   IAC  V++D+SVVQL  FCG+  + F++LV  RPFAN + NTM ACL  IDA S+A+ A +A RW  T +A+R+DT V +LQLV L  L+IP+Y+DA+T+++GAIR ++R +           E +A+E R +IR Y  R W  TWC ML  N+ AC  DT  G                 RV T+AAR GP
Sbjct:   42 HVSVRAPSVTIAVLLLTQIQFLATLSLVDSTGAEDSLLSELTQNLRWVNLWPPDSVGRTFSSGGERLFQQDGSRACGIEPTSASDIGALVFLGNIGLFTSLLLGIVVIHIVLVSAVEAYWLSKERAMEELTKAQRRGIPIRGLGAR-----RASRVAHSPDAESDPDELAASASNDGAMSREHAAADSV--------DVGVDFEEDG--------IPIRSRPKGLRAMLADCRYRSSSVWLYFPHIELLFLLFAFEGAMASQLATMRGGGCPWVFYSACASLVVYPVLMIILSYRTHRVRVAPDTLIVFKPVGEEENHGTDGTVPR-SFLSKVRTGLKEDHSMFAWANTGAWETVETPDEETVREGDQFRIGFEPLFVDFTKKASWFTVYFLLEMTGIACTAVLVDDSVVQLFLFCGLHSLSFLLLVIFRPFANSIINTMGACLTLIDAASMAMLADTAHRWQRTSRAKRMDTAVVVLQLVALVALIIPMYIDASTVILGAIREKIRSLTKSNTCDDGRTEEEAKEERKFIRGYIFRAWGPTWCRMLGSNVLACVADTTRGTR---------------RVNTSAARTGP 593          
BLAST of mRNA_S-dermatodea_contig1214.1333.1 vs. uniprot
Match: A0A6H5J9C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C2_9PHAE)

HSP 1 Score: 368 bits (945), Expect = 1.360e-114
Identity = 229/555 (41.26%), Postives = 335/555 (60.36%), Query Frame = 1
Query:  205 RRPSATLAVLLLTQLQFLATLSLVDFTVGKDSLLADFLVGLRWVNLW-------------------WPADITEDVTPRSCVDETGVSDIGIPVFVGNLVLVVVILMGIFLVHVTVISAVEAYWLSKRRANANLAAARLRGTPVSELRARADYGKRIRRTLPEPDGSTSGTHPSAPDASGGIFRRKQKGQGSTLTPHSPECQLPLDDDSDGDEEHG--KVIIPAENRLNPVAECREHSRSAWLHFPHVELLFLFFAFEGAVASQASVIRTADCPEVFYTAVVVLLLFPILMFVMVWRTIWVRVRPNVLIVFNAYDDGANQDAPNGRGNFL*RFKTSWSEDYSLFSWADKGQWETVETNN*QAVRDGNWFRIGFEPVFVDYTKSGTWFVVISLVEWAAIACVGVVIDNSVVQLLSFCGIQLVMFIILVWLRPFANRVKNTMAACLVAIDAVSVALQAISALRWDGTRKAQRVDTTVGILQLVELCVLVIPIYLDATTILMGAIRGRLRKIGVEGKAREA----RDYIRSYTRRHWCGTWCIMLRHNIFACARDTREG 1794
            R PSAT+A +L +Q+QFLATLS VD T  ++S  +D    LRWVNLW                    P+D  ED T  S + +T  S++G  +F+GNL L   +L+ IF  HV V S VEAYW++K+RA   ++ +  RG  +SE+          + T+   DGS++G+  S      GI +  Q+ +   ++P+          DS  DEE G  +   P  N +  V++CRE S+S WLH+PH+EL+FLFFAFEGAV SQ + +R+A+   + Y AV  L+L+P+LM VMV RT  V V+P+ LIVF + +    ++A  G+ + L R  +    D+SLFSWADKGQWETV+T N +A R  +WFRIGFEP+F D+T++G+WF++ +L+E A +A + V++DNS +Q L FC +  + F++LV  +PFAN V N +AA ++  DAV + + A++A  ++GT  A R+DT V ++Q + + VLVIP+Y+D    + G IR R  K  V+ +  EA    R+  +  T R W   W  M+  N+FAC RDTREG
Sbjct:  142 RSPSATMAFVLTSQIQFLATLSFVDTTGAEESAFSDLTNNLRWVNLWPSESFSEGIASRIISDEPDQPSD--EDDTTPSAISQTVTSNVGSLLFMGNLALFSGLLVIIFTSHVLVASVVEAYWVAKQRARKVISRSLRRGLSLSEIPIALSGTWSQQPTMD--DGSSAGSQSS------GIMQSPQRMERQAVSPYDGG-------DSKSDEEEGGPRNTRPG-NSIGQVSDCRELSQSPWLHYPHLELIFLFFAFEGAVTSQMAALRSANSSTILYAAVATLVLYPLLMVVMVARTHRVWVQPDALIVFASSE---TEEALAGKPSTLSRTVSGLKNDFSLFSWADKGQWETVQTANDKARRKADWFRIGFEPLFADFTQAGSWFIIYTLIECAVLASIAVLVDNSAMQFLLFCAMHSLTFVLLVGWKPFANSVLNAVAAMVMLTDAVCMGMLALAAGTFNGTATAARMDTAVMVIQALCIAVLVIPLYVDTAVSIYGMIRNR--KGSVDERENEADRAEREVTKRLTLRLWGRAWFRMVFSNMFACLRDTREG 673          
BLAST of mRNA_S-dermatodea_contig1214.1333.1 vs. uniprot
Match: D8LN89_ECTSI (Liver stage antigen 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN89_ECTSI)

HSP 1 Score: 385 bits (989), Expect = 2.310e-113
Identity = 260/639 (40.69%), Postives = 357/639 (55.87%), Query Frame = 1
Query:  175 GEGSRRHVSTRRPSATLAVLLLTQLQFLATLSLVDFTVGKDSLLADFLVGLRWVNLWWPADITEDVTPRSCVDET-------------------------GVS-----DIGIPVFVGNLVLVVVILMGIFLVHVTVISAVEAYWLSKRRANANLAAARLRGTPVSELRARADYGKRIRRTLPEPDGSTSGTHPSAPDASGGIFRRKQKGQGSTLTPHSPECQLPLDDDSDGDEEHGKVIIPAENRLNPVAECREHSRSAWLHFPHVELLFLFFAFEGAVASQASVIRTADCPEVFYTAVVVLLLFPILMFVMVWRTIWVRVRPNVLIVF--NAYDDG--ANQDAPNGRGNFL*RFKTSWSEDYSLFSWADKGQWETVETNN*QAVRDGNWFRIGFEPVFVDYTKSGTWFVVISLVEWAAIACVGVVIDNSVVQLLSFCGIQLVMFIILVWLRPFANRVKNTMAACLVAIDAVSVALQAISALRWDGTRKAQRVDTTVGILQLVELCVLVIPIYLDATTILMGAIRGRLRKIGVEGKA-REARDYIRSYTRRHWCGTWCIMLRHNIFACARDTREGHMFIPPAPFCHVELRRPRVL--TTAARAGPYPPLGSSN--GPDNGVLRRPNDDAIGTVNTPVLV 1974
            G G +   S RRPS T+A++ L QLQFLATLSLV  T  +DS L DF   LRW+NLW PA      TP S   E                          GV      D+   VFVGNLVL ++IL  IFL+H+TV S +EAYWL+KR A  ++A A+ RG PV EL AR                    ++P AP      F    + Q S  T  +        DD+D +E  G       ++L+ +AECRE S+S WLHFPHVEL++L FAFEGAVA+Q S IR      V   AV+ LL FP+LM   V  T + ++R    IVF  NA DD   A  D      +F  + +    E YS+F+W++KG+WE+V+T + +  R  +WFRIGFEP+FVD+T +G+WF V +L+E  A A VGVV+DNSV+QL  F     V F++LV L+PFAN + N M A +  IDA  +A+ A++A +W GT +A +VD+ V I+QL+ L  ++IP+Y+D   +++G+IR +LR +  +     + R YIR Y    W   +C M+R N+ A  ++T  G+     +P   V     R L  TTAAR GPYPPL + +   P     RRP +  +GTV+TP++V
Sbjct: 2172 GAGLQDSSSIRRPSTTMAIVALGQLQFLATLSLVGNTGTEDSKLYDFANNLRWINLWPPASFARSFTPASMYGELDQEGEDAXXXXXXXXXXXXXXXXXEGVENEESGDLSSGVFVGNLVLFLIILFIIFLIHITVASGIEAYWLAKRGAEKHVARAQRRGVPVRELSARL-------------------SNPWAP------FDPNSESQRSLRTAKTSGDDEGEADDTDAEE--GMPETVGRSKLSKIAECRERSQSVWLHFPHVELMYLLFAFEGAVAAQVSAIRENATLLVLILAVLALLFFPVLMTFNVMCTFFGKIRSKKHIVFIPNA-DDAVEAESDLYTSVRSFGSKVRRGLKESYSMFAWSNKGEWESVDTPDEEDKRARDWFRIGFEPLFVDFTGAGSWFAVYALIELVANAVVGVVVDNSVLQLSLFGAFNTVSFLLLVVLKPFANGIINFMGAAVYGIDAACMAVLAVTADKWGGTERASQVDSVVVIVQLLTLAAIIIPLYVDTAFMMVGSIRDKLRGVREDDHIDADERKYIRRYIWGAWAPIFCTMIRKNVLAFLKETSAGY-----SPSVKVSASHVRALSTTTAARTGPYPPLDTFDFDKPTEFDPRRPRE--LGTVDTPIVV 2775          
BLAST of mRNA_S-dermatodea_contig1214.1333.1 vs. uniprot
Match: A0A6H5KV63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV63_9PHAE)

HSP 1 Score: 332 bits (850), Expect = 2.790e-102
Identity = 198/422 (46.92%), Postives = 248/422 (58.77%), Query Frame = 1
Query:  763 DDSDGDEEHGK---VIIPAENRLNPVAECREHSRSAWLHFPHVELLFLFFAFEGAVASQASVIRTADCPEVFYTAVVVLLLFPILMFVMVWRTIWVRVRPNVLIVFNAYDDGANQDAPNGRGNFL*RFKTSWSEDYSLFSWADKGQWETVETNN*QAVRDGNWFRIGFEPVFVDYTKSGTWFVVISLVE------------------WAAIACVGVVIDNSVVQLLSFCGIQLVMFIILVWLRPFANRVK--------------------NTMAACLVAIDAVSVALQAISALRWDGTRKAQRVDTTVGILQLVELCVLVIPIYLDATTILMGAIRGRLRKIG------VEGKAREARD-YIRSYTRRHWCGTWCIMLRHNIFACARDTREGHMFIPPAPFCHVELRRPRVLTTAARAGPYP 1884
            D SD DEE G     +  AE+RL+ VAECREHS+ AWLHFPHVEL+FLFFA+EGAVASQ S +R A C  V   A + L+ +PILMFV V RT +VRVRPN  IVF                  L + +  W ED+SLF+WA+KG WET ET+N    R+G WFRIGFEP+FVD+TKSG WFV  +LVE                  WAA+ C+G +ID SV+QL  FC +  + F++LV  RPFANR++                    N M A LV IDAV +AL A+SA RW+GT  A +VD+ V +LQL   C L+IPIY+D + +L+ AIR RL+K        V  +A +  D ++R + RR W  TWC +L  NIFACA DT EG   I P      E R       AAR GP+P
Sbjct:  139 DCSDYDEEGGGGLGTLTRAESRLSSVAECREHSQFAWLHFPHVELVFLFFAYEGAVASQVSALREAGCLPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTPIVF------------------LSKVRAGWEEDHSLFAWANKGTWETAETDNEGIRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEGCLGLGHAVSFLLIYFAQWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANRLERKTQRVRFLDRLYFRAHSVINAMGAGLVGIDAVCMALLAVSASRWEGTVAAGKVDSAVMLLQLFARCALIIPIYIDTSLMLIEAIRSRLQKCTTTAPQHVRTEAEKVEDLFVRHFIRRSWPRTWCTILGKNIFACASDTSEG---IRPPGTSTAEDRLAATTMRAARTGPFP 539          
BLAST of mRNA_S-dermatodea_contig1214.1333.1 vs. uniprot
Match: A0A6H5JTJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ3_9PHAE)

HSP 1 Score: 330 bits (846), Expect = 1.260e-94
Identity = 223/568 (39.26%), Postives = 304/568 (53.52%), Query Frame = 1
Query:  205 RRPSATLAVLLLTQLQFLATLSLVDFTVGKDSLLADFLVGLRWVNLWWPADITEDVT---------PRSCVDE---------------TGVSDIGIPVFVGNLVLVVVILMGIFLVHVTVISAVEAYWLSKRRANANLAAARLRGTPVSELRARADYGKRIRRTLPEPDGSTSGTHPSAPDASGGIFRRKQKGQGSTLTPHS--PECQLPLDDDSDGDEEHGKVIIPAENRLNPVAECREHSRSAWLHFPHVELLFLFFAFEGAVASQASVIRTADCPEVFYTAVVVLL--------LFPILMFVMVWRTIWVRVRPNVLIVF--NAYDDGANQDAPNGRGNFL*RFKTSWSEDYSLFSWADKGQWETVETNN*QAVRDGNWFRIGFEPVFVDYTKSGTWFVVISLVEWAAIACVGVVIDNSVVQLLSFCGIQLVMFIILVWLRPFANRVKNTMAACLVAIDAVSVALQAISALRWDGTRKAQRVDTTVGILQLVELCVLVIPIYLDATTILMGAIRGRLRKIGVEGKA--REARDYIRSYTRRHWCGTWCIMLRHNIFACARDTREG 1794
            R PS+T+A++L +Q+QFLATLS VD T  + S L+     LRWVNLW     +E V          P S  D+               T +SD+G  +F+GNL L     + IF VH+ + SAVEAYWL+K+RA                           R  +P   G    T  S+   SG   R  Q  Q   L  H   P       +DS   +E  +    A + +  V+ECRE S+SAWLH+PH+EL+FLFFAFEGAV SQ S +R+     VFY AV  L            IL F++      VRVR + LIVF  N  D+G+      G+     +  T   +D SLF+WADKG W TV+T +  A RD +WFRIGFEP++ D+T++G+WF V +L+EWA +AC+ V++DNS VQ   FC +  + FI+LV  +PFAN V NTM A ++  DAV + + A+SA  +  T  A R+D  V + Q + + VLV+P+Y+D   ++ GAIR R   +     A  R  R++I   T R W  TW  M+  N+FAC RDTREG
Sbjct:   98 RNPSSTMALVLTSQIQFLATLSFVDDTGVEGSALSGLTKNLRWVNLWPSQSFSEGVASWVLCNEPEPTSGEDDDSEEDGDSTQRGISWTVISDVGSFLFMGNLALFAGFFVIIFSVHILLASAVEAYWLAKQRA---------------------------RNEIPRALGGDLSTSGSSTAWSG--TRAIQSPQ---LMEHQALPSWDSTGRNDSTNVQEAARTNTRAGSSIGQVSECRELSQSAWLHYPHLELVFLFFAFEGAVTSQVSALRSTSSSTVFYAAVATLTGCNLSRIATMSILGFILFDVRGRVRVRSDALIVFTSNKTDEGST-----GKSTLYSKMVTGLKKDSSLFAWADKGHWNTVQTADEDARRDADWFRIGFEPLYADFTQAGSWFTVYTLIEWATLACIAVLVDNSAVQCGLFCALHSMTFILLVVCKPFANSVLNTMGAIVMLTDAVCMGMLALSAGTFRMTAAADRIDIVVMVAQHLCIAVLVVPLYVDTLLLVWGAIRNRRGPVKTRDNAAQRAEREFINRRTLRLWGRTWFNMVGSNVFACVRDTREG 628          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1214.1333.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JD90_9PHAE8.200e-22056.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWS4_ECTSI9.760e-21754.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LLG6_ECTSI3.750e-21355.74Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JR60_9PHAE3.980e-19149.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN93_ECTSI1.830e-14146.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G1L9_ECTSI2.250e-13843.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9C2_9PHAE1.360e-11441.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN89_ECTSI2.310e-11340.69Liver stage antigen 3 n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5KV63_9PHAE2.790e-10246.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTJ3_9PHAE1.260e-9439.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1214contigS-dermatodea_contig1214:7275..14853 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-00_009250.1
Exons10
Model size1974
Cds size669
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1214.1333.1prot_S-dermatodea_contig1214.1333.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig1214 9835..12648 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924233.0337307-UTR-S-dermatodea_contig1214:7274..74541622924233.0337307-UTR-S-dermatodea_contig1214:7274..7454Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1214 7275..7454 -
1694079112.3187606-UTR-S-dermatodea_contig1214:7274..74541694079112.3187606-UTR-S-dermatodea_contig1214:7274..7454Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1214 7275..7454 -
1622924233.0464547-UTR-S-dermatodea_contig1214:7668..77941622924233.0464547-UTR-S-dermatodea_contig1214:7668..7794Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1214 7669..7794 -
1694079112.3284543-UTR-S-dermatodea_contig1214:7668..77941694079112.3284543-UTR-S-dermatodea_contig1214:7668..7794Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1214 7669..7794 -
1622924233.0591667-UTR-S-dermatodea_contig1214:8195..82721622924233.0591667-UTR-S-dermatodea_contig1214:8195..8272Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1214 8196..8272 -
1694079112.3383086-UTR-S-dermatodea_contig1214:8195..82721694079112.3383086-UTR-S-dermatodea_contig1214:8195..8272Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1214 8196..8272 -
1622924233.0712829-UTR-S-dermatodea_contig1214:8509..86581622924233.0712829-UTR-S-dermatodea_contig1214:8509..8658Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1214 8510..8658 -
1694079112.352079-UTR-S-dermatodea_contig1214:8509..86581694079112.352079-UTR-S-dermatodea_contig1214:8509..8658Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1214 8510..8658 -
1622924233.086202-UTR-S-dermatodea_contig1214:9119..92411622924233.086202-UTR-S-dermatodea_contig1214:9119..9241Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1214 9120..9241 -
1694079112.3615618-UTR-S-dermatodea_contig1214:9119..92411694079112.3615618-UTR-S-dermatodea_contig1214:9119..9241Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1214 9120..9241 -
1622924233.0990014-UTR-S-dermatodea_contig1214:9645..98341622924233.0990014-UTR-S-dermatodea_contig1214:9645..9834Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1214 9646..9834 -
1694079112.3782473-UTR-S-dermatodea_contig1214:9645..98341694079112.3782473-UTR-S-dermatodea_contig1214:9645..9834Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1214 9646..9834 -
1622924233.1471848-UTR-S-dermatodea_contig1214:12648..127811622924233.1471848-UTR-S-dermatodea_contig1214:12648..12781Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1214 12649..12781 -
1694079112.4216485-UTR-S-dermatodea_contig1214:12648..127811694079112.4216485-UTR-S-dermatodea_contig1214:12648..12781Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1214 12649..12781 -
1622924233.15996-UTR-S-dermatodea_contig1214:14220..144071622924233.15996-UTR-S-dermatodea_contig1214:14220..14407Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1214 14221..14407 -
1694079112.437391-UTR-S-dermatodea_contig1214:14220..144071694079112.437391-UTR-S-dermatodea_contig1214:14220..14407Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1214 14221..14407 -
1622924233.1739671-UTR-S-dermatodea_contig1214:14711..148531622924233.1739671-UTR-S-dermatodea_contig1214:14711..14853Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1214 14712..14853 -
1694079112.4563892-UTR-S-dermatodea_contig1214:14711..148531694079112.4563892-UTR-S-dermatodea_contig1214:14711..14853Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1214 14712..14853 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924233.1124256-CDS-S-dermatodea_contig1214:9834..99751622924233.1124256-CDS-S-dermatodea_contig1214:9834..9975Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1214 9835..9975 -
1694079112.3917053-CDS-S-dermatodea_contig1214:9834..99751694079112.3917053-CDS-S-dermatodea_contig1214:9834..9975Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1214 9835..9975 -
1622924233.1262472-CDS-S-dermatodea_contig1214:10165..106301622924233.1262472-CDS-S-dermatodea_contig1214:10165..10630Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1214 10166..10630 -
1694079112.4011416-CDS-S-dermatodea_contig1214:10165..106301694079112.4011416-CDS-S-dermatodea_contig1214:10165..10630Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1214 10166..10630 -
1622924233.1355138-CDS-S-dermatodea_contig1214:12585..126481622924233.1355138-CDS-S-dermatodea_contig1214:12585..12648Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1214 12586..12648 -
1694079112.409839-CDS-S-dermatodea_contig1214:12585..126481694079112.409839-CDS-S-dermatodea_contig1214:12585..12648Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1214 12586..12648 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig1214.1333.1

>prot_S-dermatodea_contig1214.1333.1 ID=prot_S-dermatodea_contig1214.1333.1|Name=mRNA_S-dermatodea_contig1214.1333.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=223bp
MGIFLVHVTVISAVEAYWLSKRRANANLAAARLRGTPVSELRARADYGKR
IRRTLPEPDGSTSGTHPSAPDASGGIFRRKQKGQGSTLTPHSPECQLPLD
DDSDGDEEHGKVIIPAENRLNPVAECREHSRSAWLHFPHVELLFLFFAFE
GAVASQASVIRTADCPEVFYTAVVVLLLFPILMFVMVWRTIWVRVRPNVL
IVFNAYDDGANQDAPNGRGNFL*
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mRNA from alignment at S-dermatodea_contig1214:7275..14853-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig1214.1333.1 ID=mRNA_S-dermatodea_contig1214.1333.1|Name=mRNA_S-dermatodea_contig1214.1333.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7579bp|location=Sequence derived from alignment at S-dermatodea_contig1214:7275..14853- (Saccorhiza dermatodea SderLu1190fm monoicous)
TCCGGAACCATCGCAGCCGGAACGATATCCGTCCTCACAGTGCTTGGGGT TGTTATTGTGTCCGCCGGAAGCCTTGTGAGGAGCAGCAGCGGCGACGGAT CCGATTCTTCGTCGGGTTCTCGTGGAATTGATAGCTTGGTGAGTACATAC AAGAATAACCAATTGTTACGGTAGACAGATATTTCCTGACTCGTGGCGCA ACAACTGTGACGGTACCTTTCATAGACTTGTTACGGAAATCTTAGTGGCG TAACGGTGTGCATGTGCAACGGGGGCAAGAGCTAACCAACGGAAGTCAAG CGCAGGGGTGTTGCACGCGTATCATGAACGGACGTATTACCTTGCCCCTG TCGGACCCGCATGCGATACCATTCGGGCGATAAATCTGACGTACCAAGCC CTTCCACAATATTTTGTTCGCGGCGCCACCTCGTTTCAACAGGGAGGCGC CACGGAATCCGCCGCTTACTCTGGTGGCGGAGAGGGCTCGCGGCGGCATG TCAGCACCCGCAGACCGTCGGCAACGTTAGCTGTTTTGCTCCTGACACAG CTGCAGTTCCTGGCGACTCTGTCGCTAGTGGACTTTACCGTCGGCAAGGA TTCTTTGCTCGCAGACTTCCTAGTGGGCCTCAGGTGAGTCAATATTCTGT CGGTTGGGTGCGGGACGTATGCGCTGCTGGTGGCTTACCGTACACGTATG CGCACGGGGCTCATGATGACTCATAACTTGAGGATGGAGCATGTATTTCG CCGGGTGGACCAATTCCAGCTCCCTGAACCTTACACATCTCCCTTTGCAC CTGCACGATACTGGGAGAGAAAAGGACGCACCTGCTTTCGCTTTCCCCGG GAACTGGCGTGCCTTTGTGTTTATAGAAGTGTACATGTAAACATAAATTT TATTGATTTCAGAGAAACTAACCTTCCGTAGAGTGCGTAATAAGAGCAAG AGGGGCTGGAGCGTATTGTTTGTTTGCGCCAACAAGCTCACAATAACATA TTGGTTTGTGCTTGGACGCTGGTACTTATTATTATTATGATGATTATTCT TATTATTATTATCATTATCACACATACAGCCTGGTACTGTAGGAAAATGG TTGAACAAGGGCGAGCAATACTGCGGTGGCGGCCTACCGCCTTTGAAATG CTTGGAGTATACATCGCTGCTTTGAAACTCTGTATTCGTCTTCGTTCCGT TTTGTTTTTATGTATTTTCCGGCGATTACGGCGGACGTGCCTGGGGGGGG GGGGGGAGGAAGGGGGGAAGGTAGACTGTGTGTGTTTTTTTTCGTTCTCC TTTCAATCTTGTTGTAAATTTCGTTTGGTTCTTCTCATCATCTGATTTTT ATTTCTGCGCCCGAGGCGTACCGTACGTTGCGGCTGGGGAAAGTGGGTGA GAGGGCCTGCGCGGTCGGTTTCGTCTTTCATTTATCGGTTAATTGAGTTT CACTTCATTTTTTGGGGCTATCTCCTTGTTATTTTTCGCCTGAGGTGGAC GGTGCGCTGTGTGATGCTCGCGCAGATGTTGCCAAAGTTCAGGCATCGAG AGTGTGATGGGCCCTTGCTCTAGCAGAGGGGAGACCCAAGCGGTGGTGGG GCATGCCATCTCTGACCCGAGCACGTCGTCCACTCATTTTCATTTACTGT ATAACTGGTATACTGCACACAGCGGGCTCCGTTGGTTTTTCGATTTATCG CTTTTTCACCTGACCACGAGCAGGATCGGCGACTATTGGTGGGCCGATCT ATTGCAAGGTTGATAAGCAAAACAAATAAGGTAAATCCATCAATCGCTGT GTGTATCATAGTATGCGGCAATTGTCGCGACTTCTCATCCTGGCGTAAGG TCAGGGCCCAAGTTAGGTTCTGACACACTTTTGGAGGCCGTCAAAGCACA AGAAAAACAGTCCGTACATTTACGCACGGGAGAATGAACGAAACACATCG GAAACGTACAGCTCCTCGGGTGTGATGCAGCCACCACGTGGCCAAACGCG CACGGCCCTACTGCTTAAAACGCGAAACAGAAGCCTACCGGCCGTATCGC CCTCCGTTTTGCTACAAAAAAGGTGGGTGAACCTCTGGTGGCCGGCGGAC ATCACGGAAGACGTCACACCACGAAGTTGCGTAGATGAAACCGGGGTCAG CGATATTGGCATCCCGGTGTTCGTTGGAAACCTTGTGCTGGTCGTGGTGA TCCTGATGGGCATCTTCCTCGTGCACGTGACCGTGATTTCGGCGGTGGAG GCGTATTGGCTGTCAAAGGTAAGTTCTCTACTCGGCGCTGACCCGCTGTT GGCTTCTTGTTGAGCGCCCTGCTAATGCAATTTTGTGCCAGGTAGTTCAT AGAGTGATTCAGGTCTTGGCTGGATGGTTTGTCAATAGGCTTGCTGATGA ACCAACGGCTTTTTCTCTCCTGTGTATAAGAAGCGTTGTTTCGGACGCTC TAAATAAAACCTGGGCGAATAAAAACCCATGACGGACCGGTGTTTAAAGC GGCAATATGCAGTAAAATATAGAGAGGTGATTCGGAACAGCTGGTCTTCG GGTGAAGTCCGTGTCTAATATAATCGGCGAGACAGGTGGTCGACGTTTTA ACCAGTTGGGCTTGCAAATGTAGTGTGGAGTATGTTTTTGGCGGCGCAAA GTACATCCTCGGACATGTCCAACATTGTATGGTAGTGCTTTGAGCCAATA CGGATACTCATTCAACCGATATATTATATACAAGTATCCGCTTTGCAATA GGTCGACCTTTGCGTGGTTATTTTAGTGTAATATGTCACACGCCCAACTG ATCGGCCCTCCAGGTCACGCTTGCGGTACCAGTATTTACTCCCAAATCAT TGCAGTACTGCCTTCGATTTTTGTTGCATTTTGGGTTCAGCATTGCAAGC GAATCGCGCCAAGGTCACGAAGGAAAAACACCGAAGGATCAGCTATTTGA ATGTTGAGTCAGCATGTAAAACTTTAAGGAACGTGGTTCCTTCTGTCGCG TCCTACGAACTTTGAGTTTTATTTGTTCCGTATCATCGAAATGTTTTGAC GAGCTATGAAAATAGGCTGGCTTCGGCAGTCCGAGATGACCCGATGTTCT TTTGGCCCCAGAGTGTTCAGACGATGGGATCTTTGTCGGCGTGCCCGTGG CGCATGCGACAAGTTTTGGCTAGCAATACACCTCTTGACAACATAGACCC AAGGCGGAACGTGAACATAGCGATGGTAATCAAATATTTACGAAGCGAGA GAATGCAGCTTCACCCACCCCGCGACAGCTGAAGACTGAAACGTTCTTCC CCGGAATGTTTCCGTCGCCACAGGTAGCATCAATGGCACAGTGCGCCACG AAACTAGTACAAGAAGCAAGTGGTTTCTTGCCCTGTGGCCAATCTCGAAG TCCCGTGCTCTCCTGTTTGACAAGGTTGGATGGGCCATGTGTTATCTTTC TTGCTTCAGTGCTTTTCGTGCGGGCAACATATGCACATTGGTTTGTGACG AACAATGTCGTGGGAGACGAAAGCCCGGACGTTTCGTGGCGCGCATTCCT TGGAATTGTACACATATTTACTGTAGCATTGCTGTGGGAATGTACAAATT GCATTGGTTGAAAAATGGGTTTGAACCCAGTGCTCTGGAAAGTCTCTCCT GTCCGATTGAATTTTAAACTAGTTGACAGTTCGATTTTTATCAAAATCTC TGGAGACCCTTCCCTGTATCCAATAGGTCCGAAATACTGCGATACTGCTG TGTAATTTGTTGCCTTTCCACAGAGGCTCGCAAGCTTCCACGCCGATCGC ACAGGATCCCGGCAATGCGAGAGAGTGAACGAGATAAACTCCTCAACAAC ATACCCGCAGTCGACAAGATCAACCACCCATACTACGCGGCATATGTCTT CTCCCCTTCCCATCCCAGCCGCCACAGTATCCAGTGCAATATGTTATCGC AATTCCCCAAATAGTACACAATGCGTAGTACTCTCCCCGAGGCTACGTGG CCTTTTATATTAACTTGCGGAATCGATGCATCGACTACAAATTTACGTCA ACCCGGGCCATCTTGAGGCCTTACGCTGTCCTCGCATGTTCAGCTTAATT GCCACGGAAACATACGTCTGGACACTGGCCTTTCTGCTCCGAGTCGTAAG ACACAAATCGCTGACTACATCCTGACGCCTTACGTGGTGTGCTTGTTTGT TTTTAACCTTTGCTTCATATTAGCGACGCGCCAACGCCAATCTGGCGGCA GCTCGCCTGCGCGGCACACCCGTGAGCGAATTGAGAGCGCGAGCCGACTA CGGAAAACGAATCCGCCGGACATTGCCAGAGCCGGACGGCTCCACCTCCG GCACCCATCCGTCAGCTCCGGACGCGAGCGGCGGGATATTCCGCCGTAAG CAGAAGGGTCAAGGATCCACCCTCACCCCCCATTCGCCTGAGTGCCAGTT ACCTTTGGATGACGATTCCGATGGTGATGAGGAACACGGGAAAGTGATAA TACCTGCAGAGAACCGACTAAACCCGGTGGCGGAGTGCCGGGAGCACTCG CGGTCGGCGTGGCTCCACTTCCCGCACGTTGAGCTCCTGTTTTTGTTCTT CGCATTTGAAGGGGCCGTGGCGTCGCAAGCGTCGGTCATTCGGACGGCTG ATTGCCCAGAGGTTTTCTACACGGCGGTGGTCGTGCTGGTGAGTCCTACT GACAAAGCGTCTTGAAATACATCGCATGGATGGGTCGCCAGGAGTGACTA CGCTTTCCCGAGTCGGCCTGATCGCAAGGGGGAATTAATTTACCTAAATC TTACTCATTTTTTGTCCTGTCTCGCGTTTTGTCCCTCCCTCCAACGCCAG TGTATTCATCCCGTTGCAACACGCGAAGTTGCTATTCCCTATTCTCATGT TCGTCATGGTTTGGCGAACAATTTGGGTGCGGGTCCGTCCGAACGTACTA ATCGTCTTCAACGCCTACGACGATGGCGCCAATCAAGACGCACCGAACGG CAGGGGCAACTTCCTATAGAGGTTTAAGACCAGCTGGTCGGAGGACTACA GCTTATTCTCTTGGGCAGACAAGGGGCAATGGGAGACAGTTGAAACCAAC AACTAACAAGCCGTCCGGGACGGAAACTGGTTCCGAATCGGGTTCGAACC AGTTTTCGTGGACTACACCAAATCTGGAACATGGTTTGTGGTGATTTCCC TTGTCGAGGTGGGTTTGTGAGGTGGGGGGGGTGGGGGGGAGGCATGGAAC GGAGGCACATGCACGTTTCTTCCTTTCTAGGAGCACTGGTCCTTCGCACC TACCGTGCTTGCCGACCTTTACGTCCGGCGGCGAACCGAATTTCTGCACG CGGTATCGTCGTGGTGTGCCGTAACGCATGAGAGGCTTGCTTCAAGTCAA CCAAATTTGACCTCTTGTTGTCACGGTCGTAAAAAACATACGAAGTGAAT GTGTGGATTAAACTAATAACATCGGCAAAATATTTGCAGATTAGAATTTC TGTGACTTTTCTACAGTGCAACTGGCTCTCCACGAAGTAAGGCAGTCCTC ATGTGGAAGTGAAGGACGTACCTGACATTTACCCCTCCCCGCTCGCATTC TGCATGCTTCAGTGGGCGGCAATCGCTTGTGTCGGCGTGGTGATAGACAA CAGCGTGGTGCAGCTGCTGTCGTTTTGCGGCATACAGCTGGTGATGTTCA TCATTCTGGTGTGGCTCAGACCCTTCGCAAACAGGTAACGGTACCGGTGT CGCGGGGCACAAGTTGTTTGTTATTTTCCAGCTGCGCTCCAGGCGTTATT CCCAGGCAGCGTAGAGAAAGGCAGTGCTACGACACTTGCGTAATTTCGAA GGGGATGCTTGACGGGCTGGCAACTTTGTTTTTCGTGTTAGTTGTTTCAG TATATTGCGTTAAATCTACTGTGCCAGTCCGCGCCTGTAGAAGCAGGATG CCATTCCTCTGTATAGCGCTCGTCGACCCGCCATGCCCGCACCAAATGAA GTGACTCCTACCAGCCCGTGACCCTGGTTTCGGAAGTCCGAGTTAACACT GACGTTGAGGGTAGCCCTGTGTCGCTGCTGAGAGCTCCGACGACTAGCAA ATGCCCGAACTGCGCGTGACTTGCCAAGGCTATGATAGAGCGTTGCAACG CCATAATCCAAAACCGCGTTATTTTTTTGGCCACTTGACGTCCAGGGTGA AAAACACGATGGCGGCATGTCTGGTTGCCATTGATGCGGTCAGCGTCGCG TTGCAGGCGATATCTGCCCTTCGATGGGACGGCACGCGTAAAGCTCAGAG GGTTGACACCACTGTTGGCATCTTGCAGCTCGTAGAACTTTGCGGTGAGT TACGACTGGGGTGTCAGTCTGGGAGCTGTTGGGCTTTGATAGCGCCCTAA AGGTTGCTGTGAGTGAAGCACCACAGGGCGATGGCCTTCTTTGGCACCAG CCGCAAGTACTCGTCACTGCCAGCGCTCGATCAGCCATATGCGCGCGATA TTGATGCGCTGTAAAATTAAGTCTTCATGCAAGTCACTTGCTGTCAATGT CACCGTCACTCCCGTGCCCTTCCCCACCCAGTGCTGGTGATTCCCATTTA CCTGGATGCCACGACCATCTTGATGGGAGCGATACGGGGACGGCTGCGCA AAATCGGGGTAAACCCGGGCACGACGATGGCAAGGTGGGTTGATTGATTG ATTGATTGATTTGATTGATTGATTTTCACACTTACAGCCGACCGGCCCGC CAATTTTGCAATTGCAAAAGTGGATCAAAGCACAATAGCAATTGAAATCC AGCACCCATACACAGAACAAAAAACTGATGGCCAGACATGACAGAGATAC AACCCGCACGCCGCGCGGAGCGCCTGACCCTGAATACATCAACCTCATAC AAAAGCGTGGTGTATCATCATTCCAACGAACGCCTCACGAGTACCCTTCT CGTCGCCGGGCTCGTTTACTCGCCGAGGACCAATTGCCGATAGACAACCG TCGAGCACCGGATCCCAAACATACCGTCGTCGTGCTGATTGTATGGGCAT TCATACCAGGTGGAGGGCAAAGCACGTGAGGCAAGGGACTACATTCGAAG CTACACGAGGCGGCATTGGTGTGGTACCTGGTGCATAATGCTTCGCCACA ACATATTTGCCTGTGCCAGAGACACTCGAGAAGGCGTACGTAGGTGATAT ATCTAACGGCAGGGCGTGGAATGTTCGAGGCGTTTTCGTGTCCTTGGGGA TTCCCTTCGTATTTCATGTTGTTGTCCGCGACGTGCGTATCACCGGCTGC GTTGCTGTTGGTACTGTAATTTGAAAACGGGACGGTTACGGTTACATAGA GTAAGCAATACTTGGGTTAAAGTGACATGGCCAGCCAGGTGTTTTGCAGC ACATGTTCATACCCCCCGCCCCCTTCTGTCATGTTGAACTGCGCAGGCCC CGAGTACTGACAACAGCCGCGCGCGCTGGGCCCTACCCTCCGTTGGGCTC CAGCAATGGACCTGACAATGGCGTGCTCCGCCGACCGAACGACGATGCCA TCGGCACGGTCAATACGCCGGTACTTGTG
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Coding sequence (CDS) from alignment at S-dermatodea_contig1214:7275..14853-

>mRNA_S-dermatodea_contig1214.1333.1 ID=mRNA_S-dermatodea_contig1214.1333.1|Name=mRNA_S-dermatodea_contig1214.1333.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1338bp|location=Sequence derived from alignment at S-dermatodea_contig1214:7275..14853- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGGCATCTTCCTCGTGCACGTGACCGTGATTTCGGCGGTGGAGGCGTA
TTGGCTGTCAAAGATGGGCATCTTCCTCGTGCACGTGACCGTGATTTCGG
CGGTGGAGGCGTATTGGCTGTCAAAGCGACGCGCCAACGCCAATCTGGCG
GCAGCTCGCCTGCGCGGCACACCCGTGAGCGAATTGAGAGCGCGAGCCGA
CTACGGAAAACGAATCCGCCGGACATTGCCAGAGCCGGACGGCTCCACCT
CCGGCACCCATCCGTCAGCTCCGGACGCGAGCGGCGGGATATTCCGCCGT
AAGCAGAAGGGTCAAGGATCCACCCTCACCCCCCATTCGCCTGAGTGCCA
GTTACCTTTGGATGACGATTCCGATGGTGATGAGGAACACGGGAAAGTGA
TAATACCTGCAGAGAACCGACTAAACCCGGTGGCGGAGTGCCGGGAGCAC
TCGCGGTCGGCGTGGCTCCACTTCCCGCACGTTGAGCTCCTGTTTTTGTT
CTTCGCATTTGAAGGGGCCGTGGCGTCGCAAGCGTCGGTCATTCGGACGG
CTGATTGCCCAGAGGTTTTCTACACGGCGGTGGTCGTGCTGCGACGCGCC
AACGCCAATCTGGCGGCAGCTCGCCTGCGCGGCACACCCGTGAGCGAATT
GAGAGCGCGAGCCGACTACGGAAAACGAATCCGCCGGACATTGCCAGAGC
CGGACGGCTCCACCTCCGGCACCCATCCGTCAGCTCCGGACGCGAGCGGC
GGGATATTCCGCCGTAAGCAGAAGGGTCAAGGATCCACCCTCACCCCCCA
TTCGCCTGAGTGCCAGTTACCTTTGGATGACGATTCCGATGGTGATGAGG
AACACGGGAAAGTGATAATACCTGCAGAGAACCGACTAAACCCGGTGGCG
GAGTGCCGGGAGCACTCGCGGTCGGCGTGGCTCCACTTCCCGCACGTTGA
GCTCCTGTTTTTGTTCTTCGCATTTGAAGGGGCCGTGGCGTCGCAAGCGT
CGGTCATTCGGACGGCTGATTGCCCAGAGGTTTTCTACACGGCGGTGGTC
GTGCTGTTGCTATTCCCTATTCTCATGTTCGTCATGGTTTGGCGAACAAT
TTGGGTGCGGGTCCGTCCGAACGTACTAATCGTCTTCAACGCCTACGACG
ATGGCGCCAATCAAGACGCACCGAACGGCAGGGGCAACTTCCTATAGTTG
CTATTCCCTATTCTCATGTTCGTCATGGTTTGGCGAACAATTTGGGTGCG
GGTCCGTCCGAACGTACTAATCGTCTTCAACGCCTACGACGATGGCGCCA
ATCAAGACGCACCGAACGGCAGGGGCAACTTCCTATAG
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