mRNA_S-dermatodea_contig12078.1292.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig12078.1292.1 vs. uniprot
Match: D7FHW5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHW5_ECTSI) HSP 1 Score: 129 bits (324), Expect = 9.110e-37 Identity = 63/72 (87.50%), Postives = 66/72 (91.67%), Query Frame = 1
Query: 58 MEQATEQTKRICDEIKNGLKEMSLARYKYVVQVVIGEQRGEGVRMGSRCFWDSDTDNVASETYVNVRTAVTP 273
M+QAT QTKRICDEIKNGLKEM+L RYKYVVQVVIGEQRGEGVRMGSRCFWDS+TDNVASETYVNVR P
Sbjct: 1 MDQATVQTKRICDEIKNGLKEMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDNVASETYVNVRVVRPP 72
BLAST of mRNA_S-dermatodea_contig12078.1292.1 vs. uniprot
Match: A0A6H5L5Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Z1_9PHAE) HSP 1 Score: 125 bits (314), Expect = 7.310e-36 Identity = 60/65 (92.31%), Postives = 63/65 (96.92%), Query Frame = 1
Query: 58 MEQATEQTKRICDEIKNGLKEMSLARYKYVVQVVIGEQRGEGVRMGSRCFWDSDTDNVASETYVN 252
M+QAT QTKRICDEIKNGLKEM+L RYKYVVQVVIGEQRGEGVRMGSRCFWDS+TDNVASETYVN
Sbjct: 1 MDQATVQTKRICDEIKNGLKEMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDNVASETYVN 65
BLAST of mRNA_S-dermatodea_contig12078.1292.1 vs. uniprot
Match: A0A835ZG13_9STRA (Tctex-1 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG13_9STRA) HSP 1 Score: 119 bits (299), Expect = 3.510e-33 Identity = 57/84 (67.86%), Postives = 69/84 (82.14%), Query Frame = 1
Query: 1 MREVIKGILDSELQGWTYHMEQATEQTKRICDEIKNGLKEMSLARYKYVVQVVIGEQRGEGVRMGSRCFWDSDTDNVASETYVN 252
MRE+I+ IL+ +L G TY + AT QTK+I DEIK+ LK MSL RYKYVVQV+IGEQRGEGVRMG RCFWD+DTD ASE+++N
Sbjct: 13 MREIIRAILEEQLSGQTYSGDVATAQTKKISDEIKDRLKTMSLDRYKYVVQVIIGEQRGEGVRMGCRCFWDADTDACASESFIN 96
BLAST of mRNA_S-dermatodea_contig12078.1292.1 vs. uniprot
Match: A0A6U6Z4C7_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A6U6Z4C7_9DINO) HSP 1 Score: 109 bits (272), Expect = 6.940e-29 Identity = 52/83 (62.65%), Postives = 65/83 (78.31%), Query Frame = 1
Query: 4 REVIKGILDSELQGWTYHMEQATEQTKRICDEIKNGLKEMSLARYKYVVQVVIGEQRGEGVRMGSRCFWDSDTDNVASETYVN 252
+E+IK +L S+L+ Y ME+ TK++ D+IK+ LKE++ RYK VVQV IGEQRG+GVRMGSRCFWDSDTDN ASETY N
Sbjct: 29 KEIIKEVLQSKLEKAQYSMEETQALTKQVADDIKDRLKELNWHRYKIVVQVAIGEQRGQGVRMGSRCFWDSDTDNFASETYSN 111
BLAST of mRNA_S-dermatodea_contig12078.1292.1 vs. uniprot
Match: A0A507FCI1_9FUNG (Uncharacterized protein n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507FCI1_9FUNG) HSP 1 Score: 109 bits (272), Expect = 8.240e-29 Identity = 51/83 (61.45%), Postives = 63/83 (75.90%), Query Frame = 1
Query: 7 EVIKGILDSELQGWTYHMEQATEQTKRICDEIKNGLKEMSLARYKYVVQVVIGEQRGEGVRMGSRCFWDSDTDNVASETYVNV 255
++I IL L G TYH + ++ T+ I DEIKN LKE+ L RYKY+V VVIGE RGEGVRMG RCFWD+DTDNVA +T++NV
Sbjct: 29 KLIHQILADRLTGATYHPDTCSQWTREIADEIKNRLKELDLPRYKYLVNVVIGEMRGEGVRMGCRCFWDADTDNVAQDTFINV 111
BLAST of mRNA_S-dermatodea_contig12078.1292.1 vs. uniprot
Match: A0A7S3MAW9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAW9_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.360e-28 Identity = 52/83 (62.65%), Postives = 65/83 (78.31%), Query Frame = 1
Query: 4 REVIKGILDSELQGWTYHMEQATEQTKRICDEIKNGLKEMSLARYKYVVQVVIGEQRGEGVRMGSRCFWDSDTDNVASETYVN 252
RE+IK +L S+L+ Y+ME TK++ D+IK+ LK++ L RYK VVQV IGEQRG+GVRMGSRCFWDSDTD+ ASETY N
Sbjct: 30 REIIKEVLQSKLEKAQYNMETTQALTKQVADDIKDRLKDLVLPRYKIVVQVAIGEQRGQGVRMGSRCFWDSDTDSYASETYSN 112
BLAST of mRNA_S-dermatodea_contig12078.1292.1 vs. uniprot
Match: A0A507E5F5_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E5F5_9FUNG) HSP 1 Score: 106 bits (264), Expect = 1.170e-27 Identity = 49/84 (58.33%), Postives = 63/84 (75.00%), Query Frame = 1
Query: 1 MREVIKGILDSELQGWTYHMEQATEQTKRICDEIKNGLKEMSLARYKYVVQVVIGEQRGEGVRMGSRCFWDSDTDNVASETYVN 252
++++I L L G TY+ E ++ TK I D+IKN LKE+ L RYKY+V VVIGE RGEGVRMG RCFWD+DTDNVA +T++N
Sbjct: 29 VQKLIHQALMDRLTGATYNAESCSQWTKEIADDIKNRLKELDLPRYKYIVNVVIGEMRGEGVRMGCRCFWDADTDNVAQDTFIN 112
BLAST of mRNA_S-dermatodea_contig12078.1292.1 vs. uniprot
Match: A0A507CZQ7_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CZQ7_9FUNG) HSP 1 Score: 105 bits (261), Expect = 5.240e-27 Identity = 47/84 (55.95%), Postives = 63/84 (75.00%), Query Frame = 1
Query: 1 MREVIKGILDSELQGWTYHMEQATEQTKRICDEIKNGLKEMSLARYKYVVQVVIGEQRGEGVRMGSRCFWDSDTDNVASETYVN 252
++++I +L S L G TY Q + T+ I D+IKN LKEM L RYKYVV VV+GEQRGEGVR+G+RC WD+DTDN+A + ++N
Sbjct: 45 VQKIIHDVLQSRLAGATYDHAQCSTWTREIADDIKNRLKEMDLKRYKYVVNVVLGEQRGEGVRIGARCLWDADTDNIAQDVFIN 128
BLAST of mRNA_S-dermatodea_contig12078.1292.1 vs. uniprot
Match: A0A813IMB4_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IMB4_POLGL) HSP 1 Score: 105 bits (261), Expect = 6.530e-27 Identity = 50/83 (60.24%), Postives = 64/83 (77.11%), Query Frame = 1
Query: 4 REVIKGILDSELQGWTYHMEQATEQTKRICDEIKNGLKEMSLARYKYVVQVVIGEQRGEGVRMGSRCFWDSDTDNVASETYVN 252
REVIK ++ ++L+ TY + + TK++ DEIK+ LKE+ L RYK VVQV IGEQ+G+GVRMGSRCFWD DTD+ ASETY N
Sbjct: 54 REVIKDVMQAKLERATYSPDTTSLLTKQVADEIKDRLKELMLPRYKIVVQVAIGEQKGQGVRMGSRCFWDGDTDSYASETYSN 136
BLAST of mRNA_S-dermatodea_contig12078.1292.1 vs. uniprot
Match: A0A2D4CDY2_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDY2_PYTIN) HSP 1 Score: 103 bits (258), Expect = 7.400e-27 Identity = 52/90 (57.78%), Postives = 65/90 (72.22%), Query Frame = 1
Query: 1 MREVIKGILDSELQGWTYHMEQATEQTKRICDEIKNGLKEMSLARYKYVVQVVIGEQRGEGVRMGSRCFWDSDTDNVASETYVNVRTAVT 270
M+++I IL +L+G TY ++A+ TK + D IK LK + AR KYVVQVVIGEQRGEGVRMG RCFWD +TD ASETY N++ VT
Sbjct: 27 MKQIISQILQEKLEGATYQSDRASALTKELADAIKAQLKACNFARCKYVVQVVIGEQRGEGVRMGCRCFWDPETDCYASETYSNMQRIVT 116 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12078.1292.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig12078.1292.1 >prot_S-dermatodea_contig12078.1292.1 ID=prot_S-dermatodea_contig12078.1292.1|Name=mRNA_S-dermatodea_contig12078.1292.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=92bp MREVIKGILDSELQGWTYHMEQATEQTKRICDEIKNGLKEMSLARYKYVVback to top mRNA from alignment at S-dermatodea_contig12078:2032..3052+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig12078.1292.1 ID=mRNA_S-dermatodea_contig12078.1292.1|Name=mRNA_S-dermatodea_contig12078.1292.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1021bp|location=Sequence derived from alignment at S-dermatodea_contig12078:2032..3052+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig12078:2032..3052+ >mRNA_S-dermatodea_contig12078.1292.1 ID=mRNA_S-dermatodea_contig12078.1292.1|Name=mRNA_S-dermatodea_contig12078.1292.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=552bp|location=Sequence derived from alignment at S-dermatodea_contig12078:2032..3052+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |