mRNA_S-dermatodea_contig12077.1291.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig12077.1291.1 vs. uniprot
Match: A0A6L7TM31_9CHLR (Lectin_legB domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L7TM31_9CHLR) HSP 1 Score: 82.4 bits (202), Expect = 1.670e-16 Identity = 39/79 (49.37%), Postives = 47/79 (59.49%), Query Frame = 1
Query: 1 DRTSLRAVYDKTGGPWWTTRSGWRDSLPLEQWHGVTVDGEGRVTKLDLSNNNLEGNLPVELANLTALGELRLQGNKLEG 237
DR +L+ YD G W W + PL+ W GV D +GRVT LDL NNL GN+P E+ NLTAL EL+L N L G
Sbjct: 954 DRQTLKVFYDTMAGRGWHRSENWGTNAPLKNWQGVLTDDDGRVTHLDLVRNNLTGNVPPEVVNLTALTELQLDYNDLSG 1032
BLAST of mRNA_S-dermatodea_contig12077.1291.1 vs. uniprot
Match: A0A2A2G600_9BACT (Two component regulator three Y domain protein (Fragment) n=1 Tax=Aliifodinibius sp. WN023 TaxID=2032627 RepID=A0A2A2G600_9BACT) HSP 1 Score: 77.4 bits (189), Expect = 1.780e-16 Identity = 36/75 (48.00%), Postives = 43/75 (57.33%), Query Frame = 1
Query: 1 DRTSLRAVYDKTGGPWWTTRSGWRDSLPLEQWHGVTVDGEGRVTKLDLSNNNLEGNLPVELANLTALGELRLQGN 225
DR +L +Y TGG W SGW P WHGV VD GRV +LDL N L+G LP + NLT L L ++GN
Sbjct: 31 DRQALMDLYSATGGDSWANNSGWGSGDPSGSWHGVEVDANGRVVRLDLWKNGLQGQLPSTIGNLTKLTYLNVKGN 105
BLAST of mRNA_S-dermatodea_contig12077.1291.1 vs. uniprot
Match: D7G450_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G450_ECTSI) HSP 1 Score: 81.3 bits (199), Expect = 3.680e-16 Identity = 40/72 (55.56%), Postives = 48/72 (66.67%), Query Frame = 1
Query: 1 DRTSLRAVYDKTGGPWWTTRSGWRDSLPLEQWHGVTVDGEGRVTKLDLSNNNLEGNLPVELANLTALGELRL 216
DRT L +++ T GP WTT + W S L +W+GVTV+ EGRVTKLDL NNL G +P L LTAL LRL
Sbjct: 317 DRTVLMELFNTTKGPSWTTSTAWGTSSSLGEWYGVTVNAEGRVTKLDLEKNNLTGPIPPSLGGLTALLLLRL 388
BLAST of mRNA_S-dermatodea_contig12077.1291.1 vs. uniprot
Match: A0A3C1PQ76_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A3C1PQ76_9BACT) HSP 1 Score: 80.9 bits (198), Expect = 5.790e-16 Identity = 36/70 (51.43%), Postives = 46/70 (65.71%), Query Frame = 1
Query: 1 DRTSLRAVYDKTGGPWWTTRSGWRDSLPLEQWHGVTVDGEGRVTKLDLSNNNLEGNLPVELANLTALGEL 210
DR +L A+Y+ TGG W T++ W PL WHGVTV+ GRV L+LS NNL GN+PVE+ NL L +
Sbjct: 512 DRAALIAIYNATGGANWITKTNWLSQEPLNAWHGVTVNANGRVIALNLSENNLIGNIPVEIGNLLELDSI 581
BLAST of mRNA_S-dermatodea_contig12077.1291.1 vs. uniprot
Match: A0A7X3PID0_9BACT (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A7X3PID0_9BACT) HSP 1 Score: 80.1 bits (196), Expect = 1.090e-15 Identity = 36/70 (51.43%), Postives = 47/70 (67.14%), Query Frame = 1
Query: 1 DRTSLRAVYDKTGGPWWTTRSGWRDSLPLEQWHGVTVDGEGRVTKLDLSNNNLEGNLPVELANLTALGEL 210
DR++L A Y T GP WT R W PL QW+GV VDG GRV++L+L +NN+ G +P EL +L+ L EL
Sbjct: 491 DRSALVAFYKATDGPNWTQRDNWLTDAPLAQWYGVQVDGRGRVSRLELHDNNVGGRIPAELGHLSGLVEL 560
BLAST of mRNA_S-dermatodea_contig12077.1291.1 vs. uniprot
Match: A0A6B1AF42_9BACT (Uncharacterized protein n=2 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A6B1AF42_9BACT) HSP 1 Score: 80.1 bits (196), Expect = 1.090e-15 Identity = 37/80 (46.25%), Postives = 48/80 (60.00%), Query Frame = 1
Query: 1 DRTSLRAVYDKTGGPWWTTRSGWRDSLPLEQWHGVTVDGEGRVTKLDLSNNNLEGNLPVELANLTALGELRLQGNKLEGK 240
D + LR +Y G W GW P+++W+GV D G V +LDLS+NNL G P LANL AL ELRL GN++ G+
Sbjct: 603 DVSVLRGLYAAAAGSGWIRSDGWLSERPVDEWYGVGADSLGMVVRLDLSDNNLVGEFPPRLANLAALRELRLTGNRVAGR 682
BLAST of mRNA_S-dermatodea_contig12077.1291.1 vs. uniprot
Match: A0A7X3WB35_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X3WB35_9BACT) HSP 1 Score: 79.7 bits (195), Expect = 1.440e-15 Identity = 34/64 (53.12%), Postives = 45/64 (70.31%), Query Frame = 1
Query: 1 DRTSLRAVYDKTGGPWWTTRSGWRDSLPLEQWHGVTVDGEGRVTKLDLSNNNLEGNLPVELANL 192
DR +L A YD TGGP WT R+ W + PL++WHGV+ D +G VT+L L+ N+L+G LP EL L
Sbjct: 379 DRNALIAFYDMTGGPDWTDRANWLSNAPLDEWHGVSTDADGMVTRLALNGNSLQGPLPEELGQL 442
BLAST of mRNA_S-dermatodea_contig12077.1291.1 vs. uniprot
Match: A0A7X4B239_9BACT (Intimin n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X4B239_9BACT) HSP 1 Score: 79.3 bits (194), Expect = 2.020e-15 Identity = 36/75 (48.00%), Postives = 48/75 (64.00%), Query Frame = 1
Query: 1 DRTSLRAVYDKTGGPWWTTRSGWRDSLPLEQWHGVTVDGEGRVTKLDLSNNNLEGNLPVELANLTALGELRLQGN 225
+R +L A+Y++T GP WT S W L +WHGV D EG+V K+DL +NNL G+LP L +LT+L L L N
Sbjct: 505 ERDALIALYNRTDGPNWTNNSNWYSFKSLNEWHGVITDAEGKVVKVDLEDNNLNGSLPGSLGDLTSLTALNLSFN 579
BLAST of mRNA_S-dermatodea_contig12077.1291.1 vs. uniprot
Match: A0A7X3R8N3_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X3R8N3_9BACT) HSP 1 Score: 77.8 bits (190), Expect = 4.330e-15 Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 1
Query: 1 DRTSLRAVYDKTGGPWWTTRSGWRDSLPLEQWHGVTVDGEGRVTKLDLSNNNLEGNLPVELANL 192
DR +L YD TGGP WT R+ W + PL++WHGV+ D +G VT+L L+ N L+G LP EL L
Sbjct: 99 DRNALIVFYDMTGGPDWTERANWLSNAPLDEWHGVSTDADGMVTRLALNGNTLQGPLPEELGQL 162
BLAST of mRNA_S-dermatodea_contig12077.1291.1 vs. uniprot
Match: A0A6G2JIA8_9BACT (BIG2 domain-containing protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6G2JIA8_9BACT) HSP 1 Score: 78.2 bits (191), Expect = 5.050e-15 Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 1
Query: 1 DRTSLRAVYDKTGGPWWTTRSGWRDSLPLEQWHGVTVDGEGRVTKLDLSNNNLEGNLPVELANLTALGELRLQ 219
DR +L A+Y+ TGGP W ++ W LPL WHGV+++ +GRV +L L +NNL+G+LP E+A L L +L L+
Sbjct: 157 DRDALVALYNGTGGPDWIIQTNWLSDLPLRDWHGVSLNDDGRVEELHLFDNNLKGSLPAEIAKLEELRKLVLR 229 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12077.1291.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig12077.1291.1 >prot_S-dermatodea_contig12077.1291.1 ID=prot_S-dermatodea_contig12077.1291.1|Name=mRNA_S-dermatodea_contig12077.1291.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=83bp DRTSLRAVYDKTGGPWWTTRSGWRDSLPLEQWHGVTVDGEGRVTKLDLSNback to top mRNA from alignment at S-dermatodea_contig12077:4608..5310+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig12077.1291.1 ID=mRNA_S-dermatodea_contig12077.1291.1|Name=mRNA_S-dermatodea_contig12077.1291.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=703bp|location=Sequence derived from alignment at S-dermatodea_contig12077:4608..5310+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig12077:4608..5310+ >mRNA_S-dermatodea_contig12077.1291.1 ID=mRNA_S-dermatodea_contig12077.1291.1|Name=mRNA_S-dermatodea_contig12077.1291.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=498bp|location=Sequence derived from alignment at S-dermatodea_contig12077:4608..5310+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |