mRNA_S-dermatodea_contig1204.1268.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1204.1268.1 vs. uniprot
Match: D8LR59_ECTSI (Triacylglycerol lipase, putative (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR59_ECTSI) HSP 1 Score: 126 bits (316), Expect = 2.930e-30 Identity = 68/122 (55.74%), Postives = 90/122 (73.77%), Query Frame = 3
Query: 3 FELMCFIDHADTDTQVALWRDATNRRLVVAFRGTEAWKDVLTDANFLLDDLDRSGEVEQAKTIPVAAEEVMAAMRNTTSGWKKDRVQPLPETLGKQRDYLLQSMNKALESSKDLLKDLQSTT 368
FE MCFID+ DTDTQV +WRD +RLVV+FRGT +D +DLD SG V Q +P A ++VMAA+R TT+GWKK+RVQP+P TL +Q+ ++L+SMNK L++S++LLKDLQ TT
Sbjct: 449 FEFMCFIDNHDTDTQVGVWRDEAKKRLVVSFRGTAQLED---------EDLDHSG-VTQRAVLP-AVDDVMAAVRETTAGWKKERVQPIPVTLAQQKVHMLESMNKLLDTSRELLKDLQDTT 559
BLAST of mRNA_S-dermatodea_contig1204.1268.1 vs. uniprot
Match: A0A6H5KT38_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT38_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 2.210e-19 Identity = 58/127 (45.67%), Postives = 84/127 (66.14%), Query Frame = 3
Query: 3 FELMCFIDHADTDTQVA-----LWRDATNRRLVVAFRGTEAWKDVLTDANFLLDDLDRSGEVEQAKTIPVAAEEVMAAMRNTTSGWKKDRVQPLPETLGKQRDYLLQSMNKALESSKDLLKDLQSTT 368
FE MCFID+ DTDTQ + ++A R L G +D + + +DLD SG + +A +P A ++VMAA+R TT+GWKK+RVQP+P TL +Q+ ++L+SMNK L++S+ LLKDL+ TT
Sbjct: 452 FEFMCFIDNHDTDTQASGGLARRGQEAYGRLL--PRHGAARGRDYGRQLSAVTEDLDHSGVIRRA-VLP-AVDDVMAAVRETTAGWKKERVQPIPVTLAQQKVHMLESMNKLLDTSRALLKDLKDTT 574
BLAST of mRNA_S-dermatodea_contig1204.1268.1 vs. uniprot
Match: UPI001F5C11B4 (uncharacterized protein LOC124671575 n=2 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5C11B4) HSP 1 Score: 69.7 bits (169), Expect = 1.360e-10 Identity = 31/49 (63.27%), Postives = 40/49 (81.63%), Query Frame = 3
Query: 3 FELMCFIDHADTDTQVALWRDATNRRLVVAFRGTEA--WKDVLTDANFL 143
FE +CF+D+ TDTQVA+WRD++ RRLVVAFRGTE WKD++TD N +
Sbjct: 580 FEKICFLDNGSTDTQVAIWRDSSRRRLVVAFRGTEQTRWKDLVTDLNLV 628
BLAST of mRNA_S-dermatodea_contig1204.1268.1 vs. uniprot
Match: A0A6P4CD85_ARADU (uncharacterized protein LOC107474267 n=6 Tax=Arachis TaxID=3817 RepID=A0A6P4CD85_ARADU) HSP 1 Score: 69.3 bits (168), Expect = 1.850e-10 Identity = 32/45 (71.11%), Postives = 38/45 (84.44%), Query Frame = 3
Query: 3 FELMCFIDHADTDTQVALWRDATNRRLVVAFRGTEA--WKDVLTD 131
FE +CF+D+A TDTQVA+WRD+T RRLVVAFRGTE WKD+ TD
Sbjct: 556 FEKICFLDNASTDTQVAIWRDSTRRRLVVAFRGTEQSQWKDLRTD 600
BLAST of mRNA_S-dermatodea_contig1204.1268.1 vs. uniprot
Match: A0A7J7LNY3_9MAGN (C2 domain-containing protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7LNY3_9MAGN) HSP 1 Score: 68.9 bits (167), Expect = 2.600e-10 Identity = 31/45 (68.89%), Postives = 38/45 (84.44%), Query Frame = 3
Query: 3 FELMCFIDHADTDTQVALWRDATNRRLVVAFRGTEA--WKDVLTD 131
FE +CF+D+ TDTQVA+WRD+T +RLVVAFRGTE WKD+LTD
Sbjct: 458 FEKICFLDNTSTDTQVAIWRDSTQKRLVVAFRGTEQTRWKDLLTD 502
BLAST of mRNA_S-dermatodea_contig1204.1268.1 vs. uniprot
Match: A0A8K0MTN4_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0MTN4_9ROSA) HSP 1 Score: 68.6 bits (166), Expect = 3.660e-10 Identity = 31/45 (68.89%), Postives = 38/45 (84.44%), Query Frame = 3
Query: 3 FELMCFIDHADTDTQVALWRDATNRRLVVAFRGTEA--WKDVLTD 131
FE +CF+D+A TDTQVA+WRD+T RRLV+AFRGTE WKD+ TD
Sbjct: 579 FEKICFLDNATTDTQVAIWRDSTRRRLVIAFRGTEQARWKDLRTD 623
BLAST of mRNA_S-dermatodea_contig1204.1268.1 vs. uniprot
Match: UPI0007753890 (uncharacterized protein LOC4336360 isoform X5 n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=UPI0007753890) HSP 1 Score: 68.2 bits (165), Expect = 4.490e-10 Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 3
Query: 3 FELMCFIDHADTDTQVALWRDATNRRLVVAFRGTEA--WKDVLTD 131
FE +CF+D+ TDTQVA+WRD + RRLVVAFRGTE WKD+LTD
Sbjct: 426 FEKICFLDNVSTDTQVAIWRDCSRRRLVVAFRGTEQSKWKDLLTD 470
BLAST of mRNA_S-dermatodea_contig1204.1268.1 vs. uniprot
Match: A0A0D9ZN08_9ORYZ (C2 domain-containing protein n=3 Tax=Oryza TaxID=4527 RepID=A0A0D9ZN08_9ORYZ) HSP 1 Score: 68.2 bits (165), Expect = 4.660e-10 Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 3
Query: 3 FELMCFIDHADTDTQVALWRDATNRRLVVAFRGTEA--WKDVLTD 131
FE +CF+D+ TDTQVA+WRD + RRLVVAFRGTE WKD+LTD
Sbjct: 594 FEKICFLDNVSTDTQVAIWRDCSRRRLVVAFRGTEQSKWKDLLTD 638
BLAST of mRNA_S-dermatodea_contig1204.1268.1 vs. uniprot
Match: A0A3B6B206_WHEAT (C2 domain-containing protein n=5 Tax=Triticum TaxID=4564 RepID=A0A3B6B206_WHEAT) HSP 1 Score: 67.8 bits (164), Expect = 5.930e-10 Identity = 30/45 (66.67%), Postives = 38/45 (84.44%), Query Frame = 3
Query: 3 FELMCFIDHADTDTQVALWRDATNRRLVVAFRGTEA--WKDVLTD 131
FE +CF+D+ TDTQVA+WRD++ RRLVVAFRGTE WKD++TD
Sbjct: 578 FEKICFLDNVSTDTQVAIWRDSSRRRLVVAFRGTEQTRWKDLITD 622
BLAST of mRNA_S-dermatodea_contig1204.1268.1 vs. uniprot
Match: A0A446L924_TRITD (C2 domain-containing protein n=2 Tax=Triticum TaxID=4564 RepID=A0A446L924_TRITD) HSP 1 Score: 67.8 bits (164), Expect = 6.060e-10 Identity = 30/45 (66.67%), Postives = 38/45 (84.44%), Query Frame = 3
Query: 3 FELMCFIDHADTDTQVALWRDATNRRLVVAFRGTEA--WKDVLTD 131
FE +CF+D+ TDTQVA+WRD++ RRLVVAFRGTE WKD++TD
Sbjct: 412 FEKICFLDNVSTDTQVAIWRDSSRRRLVVAFRGTEQTRWKDLITD 456 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1204.1268.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1204.1268.1 >prot_S-dermatodea_contig1204.1268.1 ID=prot_S-dermatodea_contig1204.1268.1|Name=mRNA_S-dermatodea_contig1204.1268.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=181bp MCFIDHADTDTQVALWRDATNRRLVVAFRGTEAWKDVLTDANFLLDDLDRback to top mRNA from alignment at S-dermatodea_contig1204:1344..3717+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1204.1268.1 ID=mRNA_S-dermatodea_contig1204.1268.1|Name=mRNA_S-dermatodea_contig1204.1268.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2374bp|location=Sequence derived from alignment at S-dermatodea_contig1204:1344..3717+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1204:1344..3717+ >mRNA_S-dermatodea_contig1204.1268.1 ID=mRNA_S-dermatodea_contig1204.1268.1|Name=mRNA_S-dermatodea_contig1204.1268.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1086bp|location=Sequence derived from alignment at S-dermatodea_contig1204:1344..3717+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |