mRNA_S-dermatodea_contig12036.1265.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig12036.1265.1 vs. uniprot
Match: D8LRH3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRH3_ECTSI) HSP 1 Score: 351 bits (901), Expect = 1.140e-103 Identity = 244/467 (52.25%), Postives = 291/467 (62.31%), Query Frame = 3
Query: 780 RQEVDEHAARASDAATAALAAALASATMLPPSPRNAQ---PLQAPKK-------RKEECVAGAAAAXXXXXXXXXXXXXXXRGEGRAGRDPI-MMIFRVPQGRALPERVEPPDVDRALAAARFAPQQPPSSRGSIAGAFGAGVEIXXXXXXXXXXXXXXXXXTTSMPCMVGFFKVDDTTGVHRCAGTWAMTKTDLEAAARIESRASPFEFKTTVGGGAD-----FPHTGNYRGHFLVRQHPKPVTKVEEDELHLAFERNTGGGWNVNGSGRNVYGPFTITGRLGADRRLEVFRAYPKPSSRGHRRASTSSHPAPAPARAP-----------TSPAACVPNRGKHPHSAPPLVVAQAASPPAFANGA-SAMAEDAASLVSPAPTSRRVSRTPSYLIKDIGNDGTAHLTHGLRRCVTLLRSVMGVRGKSEWFLEPVDFVKLALVDYPRIIRRPMDLGTIRKKLEGGTYQ 2096
RQEVDEHAARASDAA P+PR A+ P ++P + EE A XXXXXXXXXXXXXXX G G AGR +M+FR PQGR+LP++ DV+RAL+AA F P + + G G G + T SMPCMVGFFKVD+ TGVHRCAG WAM K DL+AA + +RASPFEF+ GGGA FPHTG Y+GHFLVRQ PKPV+KVEE +LH+AF +N+ GGWNV G G NVYG FTITGRL A+R LEV+RAY K + HRRAS++ A A A ++P PNRGKH A A F++G SA A D+ S +PAP SRRVSRTPS LI DIGNDGT HLTHGLRRCVT+L ++ +RGKSEWF EPVD+V L L +Y II+RPMDLGT++ KLE G Y+
Sbjct: 320 RQEVDEHAARASDAAXXXXXXXXXXXXXXXPTPRPARASPPSKSPVPSQQQLLPKAEERGTAAXXXXXXXXXXXXXXXXXXSGGGSAGRHSTPLMVFRAPQGRSLPQKCSEADVERALSAAHFVPDRSSPAWG------GGGPPLPPPLPLP----------TGSMPCMVGFFKVDEKTGVHRCAGNWAMNKADLQAADK--NRASPFEFRMVEGGGAGTGVVRFPHTGKYQGHFLVRQPPKPVSKVEEKDLHIAFVKNSEGGWNVEGQGNNVYGAFTITGRLSANRELEVYRAYRKVAKAQHRRASST-----AGAGAXXXXXXXXXXXXSTPGLHGPNRGKHFSPA-------AVGGTGFSDGGGSAKAGDSGS-ETPAPPSRRVSRTPSKLINDIGNDGTTHLTHGLRRCVTVLNNLRAIRGKSEWFNEPVDYVGLNLPEYTTIIKRPMDLGTVKSKLESGEYK 755
BLAST of mRNA_S-dermatodea_contig12036.1265.1 vs. uniprot
Match: A0A836CDK9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDK9_9STRA) HSP 1 Score: 157 bits (398), Expect = 1.040e-36 Identity = 121/323 (37.46%), Postives = 160/323 (49.54%), Query Frame = 3
Query: 1242 MPCMVGFFKVDDTTGVHRCAGTWAMT-KTDLEAAARIESRASPFEFKTTVG-GGADFPHTGNYRGHFLVRQHPKPVTKVEEDELHLAFERNTGGGWNVNGSGRNVYGPFTITGRLGADRRLEVFRAY------PKPSSRGHR------RASTSSHPAPAPARAPTSPAACVPNRGKHPHSAPPLVVAQAAS--PPAFANGASAMAEDA------------ASLVSP--APTSRRVSRTPSYLIKDIGNDGTAHLTHGLRRCVTLLRSVMGVRGKSEWFLEPVDFVKLALVDYPRIIRRPMDLGTIRKK---------LEGGTY 2093
+PCM G V+ TG H G W M+ K L SPFEF+ GG + P +G Y HF+VR KP KV E+ + L F N+GGGWNV GSG N +GPF + G L R+LE+F+ Y P G R RA+T P A A A ++ A +P G V +A+S + +NGA+ + ++A A+ V P AP RR+SR PS+L D G L GLR+CV LL+ + V+ S WF +PVD V L L Y I++RPMDLGT++ K LE G Y
Sbjct: 84 LPCMRGVLAVEANTGDHVVTGWWGMSSKAHLPG-----GETSPFEFRRGARPGGEEVPASGEYAAHFMVRMPGKPADKVHENGMQLTFTVNSGGGWNVEGSGTNKFGPFNLLGTLDGQRQLELFKIYTIRAAAPSTQKTGKRPTPVKRRAATGISPPVATADATSTKAPMLPPPGVGXXX---XXVRRASSFFDDSTSNGATQVPDEAQFEAPPGGDAKVAAGVGPDGAPLRRRISRLPSHLQDDRGQ---VRLPEGLRKCVNLLKQISTVKNLSHWFRDPVDPVALNLPTYLTIVKRPMDLGTVKAKRLSRIGSTHLEAGEY 395
BLAST of mRNA_S-dermatodea_contig12036.1265.1 vs. uniprot
Match: A0A7S3GWX5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GWX5_9STRA) HSP 1 Score: 107 bits (266), Expect = 2.790e-20 Identity = 98/303 (32.34%), Postives = 138/303 (45.54%), Query Frame = 3
Query: 1296 CAGTWAMTKTDLEAAARIESRASPFEFKTTVGG--GADFPHTGNYRGHFLVRQHP--KPVTKVEEDELHLAFERNTG--GGWNVNGSGRNVYGPFTITGRLGADRRLEVFRAY----PKPSSRGHRRAST---SSHPAPAPARAPTSPAACVPNRGKHPHSAPPL------------VVAQAASPPAFANGA-----SAMAEDAASLVSPAPTSRRVSRTPSY-------LIKDIGNDGTAHLTHGLRRCVTLLRSVMGVRGKSEWFLEPVDFVKLALVDYPRIIRRPMDLGTIRKKLEGGTY 2093
C G W M+ + A ++ S FEFK + FP G Y+GHF ++Q P K KVE+ E+ F R+ G + +NG+G N +G FT+ G L D L V+R Y P P + RR S S P R+ A G+ PP+ V Q+ + +A A S A V PAP S + +TPS + +D +D L+ L++C LL+ M + + WFLEPVD+V+ + DYP II PMD TIRK++EG Y
Sbjct: 85 CKGAWGMS----DYAHNFPAQLSEFEFKLVKADEDSSLFPVNGRYQGHFYLKQAPPLKGSVKVEDKEMVFKFVRSEDVEGQYMINGNGLNKFGSFTLKGTLSEDGDLHVYREYYNLTPLPGTHVKRRLSIDGDSEGP-----RSKKKALAVKAGTGEDIIPLPPMDPNVSPREGAGRVRKQSLAMKEYAETAVKAPTSVPKPAATPKVEPAPLSLKQPKTPSQQAAPVPLMRQDSSSDRAHRLSFPLKKCSELLKE-MSKQPHAAWFLEPVDYVRFNIPDYPLIISTPMDFSTIRKRIEGSLY 377
BLAST of mRNA_S-dermatodea_contig12036.1265.1 vs. uniprot
Match: A0A7S2GBV0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GBV0_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 3.800e-9 Identity = 31/82 (37.80%), Postives = 52/82 (63.41%), Query Frame = 3
Query: 1851 RVSRTPSYLIKDIGNDGTAHLTHGLRRCVTLLRSVMGVRGKSEWFLEPVDFVKLALVDYPRIIRRPMDLGTIRKKLEGGTYQ 2096
R+ R PS+L + ++ L +R+C+ L+ +MG + + WF E VD+V L ++DYP I++ PMDLGT++K +E G +
Sbjct: 167 RIRRLPSHLKEQPDDEQQVRLNEHMRKCLQTLKHLMG-QPNAHWFNERVDYVALGILDYPTIVKNPMDLGTVKKNIETGLIE 247
BLAST of mRNA_S-dermatodea_contig12036.1265.1 vs. uniprot
Match: A0A485L658_9STRA (Aste57867_15482 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L658_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 6.660e-9 Identity = 94/355 (26.48%), Postives = 145/355 (40.85%), Query Frame = 3
Query: 1233 TTSMPCMVGFFKVDDTTGVHRCAGTWAMTKTDL------------------------------------EAAARIESRASPFEFKTTVGGGADFPHTGNYRGHF-LVRQHPKPVTKVEEDELHLAFER-NTGGGWNVNGSGRNVYGPFTITGRLG-ADRRLEVFRAY-PKPSSRGHRRASTSSHPAPAPARAPTSPAACVPNRGKHPHS-----------------------APPLVVAQAASPPAFA---NGASAMAEDAASLVSPAPTSRRVSRTPSYLIKDIGNDGTAHLTH--GLRRCVTLLRSVMGVRGKSEWFLEPVDFVKLALVDYPRIIRRPMDLGTIRKKLEGGTY 2093
TT P ++G ++VD+ GV G WAMT+ + A E+RASP + + + P + G F ++ KP T E+D L L F++ + + V G+G N +G FT+ G L A + L +++AY PK + +R P R+ P+ + K P A P+ V AF NG S+ + D S + +SR S L + +G A L +R+C +L++++G K+ FL PVD V L + DY ++I+ PMDLGT+R LE G Y
Sbjct: 99 TTQCPLLLGSYRVDEN-GVALWTGRWAMTEAEYATGITSLFEMYSSKPLSSTRLLHHNQSDPLNNLQGESATDEDENRASPVPAEKVMTAKGECPIERKFDGFFQILTVKGKPATIPEKDVL-LTFQKCDIDNVFTVRGTGENRFGVFTLQGVLDEASQELRLYKAYKPKDKTPVAKRTRPKDPP-----RSTMEPSVKLEKVEKTPKKQKVXXXXAEKFESINPAEMTTTLAAPVAVDFTHVSKAFGMPTNGTSSSSYDRPSSSN---SSRHRSERKRSLPAHLREEGLAELERMPAMRKCHNILKNLVG-NAKAVPFLIPVDPVALGIPDYFKVIKEPMDLGTVRGNLENGVY 442
BLAST of mRNA_S-dermatodea_contig12036.1265.1 vs. uniprot
Match: D8R369_SELML (Uncharacterized protein n=8 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R369_SELML) HSP 1 Score: 66.6 bits (161), Expect = 1.180e-7 Identity = 34/59 (57.63%), Postives = 44/59 (74.58%), Query Frame = 3
Query: 1923 LRRCVTLLRSVMGVRGKSEW-FLEPVDFVKLALVDYPRIIRRPMDLGTIRKKLEGGTYQ 2096
+++C TLL+ + + K W F EPVD VKL L DY ++IRRPMDLGTI+KKLEGG Y+
Sbjct: 114 MKQCGTLLKKL--ITHKHAWVFNEPVDAVKLGLHDYHKVIRRPMDLGTIKKKLEGGHYR 170
BLAST of mRNA_S-dermatodea_contig12036.1265.1 vs. uniprot
Match: A0A3R7B7T7_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7B7T7_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 2.820e-7 Identity = 83/289 (28.72%), Postives = 131/289 (45.33%), Query Frame = 3
Query: 1290 HRCAGTWAMTKTDLEAAARIESRASPFEF-KTTVGGGADFPHTGNYRGHF-LVRQHPKPVTKVEEDELHLAFER-NTGGGWNVNGSGRNVYGPFTITGRLG-ADRRLEVFRAY-PKPSSRGHRRASTSSHPAPAPARAPTSPAACVPNRGKH-----PHSAPPLVVAQAASPPAFANGASAMAEDAASLVSPAPT---------SRRVSRTPSYLIKDIGNDGTAHLTH--GLRRCVTLLRSVMGVRGKSEWFLEPVDFVKLALVDYPRIIRRPMDLGTIRKKLEGGTY 2093
H G A TD + E+RASP K+T G P + G F ++ KP T + E ++ L F++ + + V G+G N +G FT+ G L + L +++AY PK + +R + P A T+ P++ + + P + + A+ A + A AA + APT +R S L + +G A L +R+C +L++++ KS FL PVD V LA+ DY ++I+ PMDLGT+R LE G Y
Sbjct: 1211 HNNNGLHAENATDED-----ENRASPLASDKSTTKGSC--PIERKFDGFFQILTMKGKPAT-IPEKDVSLTFQKCDMDNVYLVRGTGENRFGVFTLQGLLDETSQELRLYKAYKPKDKTPVAKRTRPKAEPV-VKVEAQTAHVEKTPSKKQKVKVEPAYPIPQSITSSLATSVAVDFAYVSKALGAAPTTTSAPTISYERMSNAARHRSERKRSLPAHLREEGLAELERVPAMRKCHNILKNLI-TNPKSVPFLVPVDPVALAIPDYFKVIKEPMDLGTVRGNLENGVY 1489
BLAST of mRNA_S-dermatodea_contig12036.1265.1 vs. uniprot
Match: W4H4J0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H4J0_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 2.870e-7 Identity = 84/289 (29.07%), Postives = 132/289 (45.67%), Query Frame = 3
Query: 1290 HRCAGTWAMTKTDLEAAARIESRASPFEF-KTTVGGGADFPHTGNYRGHF-LVRQHPKPVTKVEEDELHLAFER-NTGGGWNVNGSGRNVYGPFTITGRLG-ADRRLEVFRAY-PKPSSRGHRRASTSSHPAPAPARAPTSPAACVPNRGKHPHSAP----PLVVAQAASPPAFANGAS-AMAEDAASLVSPAPT---------SRRVSRTPSYLIKDIGNDGTAHLTH--GLRRCVTLLRSVMGVRGKSEWFLEPVDFVKLALVDYPRIIRRPMDLGTIRKKLEGGTY 2093
H G A TD + E+RASP K+T G P + G F ++ KP T + E ++ L F++ + + V G+G N +G FT+ G L + L +++AY PK + +R + P A T+ P++ + P P + + +P + A + A AA + APT +R S L + +G A L +R+C +L++++ KS FL PVD V LA+ DY ++I+ PMDLGT+R LE G Y
Sbjct: 205 HNNNGLHAENATDED-----ENRASPLASDKSTTKGSC--PIERKFDGFFQILTMKGKPAT-IPEKDVSLTFQKCDMDNVYLVRGTGENRFGVFTLQGLLDETSQELRLYKAYKPKDKTPVAKRTRPKAEPV-VKVEAQTAHVEKTPSKKQKVKVEPAYPIPQSITSSLAPSVAVDFAYVSKALGAAPTTTSAPTISYERMSNAARHRSERKRSLPAHLREEGLAELERVPAMRKCHNILKNLI-TNPKSVPFLVPVDPVALAIPDYFKVIKEPMDLGTVRGNLENGVY 483
BLAST of mRNA_S-dermatodea_contig12036.1265.1 vs. uniprot
Match: W4H2D5_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H2D5_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 3.150e-7 Identity = 84/289 (29.07%), Postives = 132/289 (45.67%), Query Frame = 3
Query: 1290 HRCAGTWAMTKTDLEAAARIESRASPFEF-KTTVGGGADFPHTGNYRGHF-LVRQHPKPVTKVEEDELHLAFER-NTGGGWNVNGSGRNVYGPFTITGRLG-ADRRLEVFRAY-PKPSSRGHRRASTSSHPAPAPARAPTSPAACVPNRGKHPHSAP----PLVVAQAASPPAFANGAS-AMAEDAASLVSPAPT---------SRRVSRTPSYLIKDIGNDGTAHLTH--GLRRCVTLLRSVMGVRGKSEWFLEPVDFVKLALVDYPRIIRRPMDLGTIRKKLEGGTY 2093
H G A TD + E+RASP K+T G P + G F ++ KP T + E ++ L F++ + + V G+G N +G FT+ G L + L +++AY PK + +R + P A T+ P++ + P P + + +P + A + A AA + APT +R S L + +G A L +R+C +L++++ KS FL PVD V LA+ DY ++I+ PMDLGT+R LE G Y
Sbjct: 211 HNNNGLHAENATDED-----ENRASPLASDKSTTKGSC--PIERKFDGFFQILTMKGKPAT-IPEKDVSLTFQKCDMDNVYLVRGTGENRFGVFTLQGLLDETSQELRLYKAYKPKDKTPVAKRTRPKAEPV-VKVEAQTAHVEKTPSKKQKVKVEPAYPIPQSITSSLAPSVAVDFAYVSKALGAAPTTTSAPTISYERMSNAARHRSERKRSLPAHLREEGLAELERVPAMRKCHNILKNLI-TNPKSVPFLVPVDPVALAIPDYFKVIKEPMDLGTVRGNLENGVY 489
BLAST of mRNA_S-dermatodea_contig12036.1265.1 vs. uniprot
Match: W4H4I6_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H4I6_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 3.150e-7 Identity = 84/289 (29.07%), Postives = 132/289 (45.67%), Query Frame = 3
Query: 1290 HRCAGTWAMTKTDLEAAARIESRASPFEF-KTTVGGGADFPHTGNYRGHF-LVRQHPKPVTKVEEDELHLAFER-NTGGGWNVNGSGRNVYGPFTITGRLG-ADRRLEVFRAY-PKPSSRGHRRASTSSHPAPAPARAPTSPAACVPNRGKHPHSAP----PLVVAQAASPPAFANGAS-AMAEDAASLVSPAPT---------SRRVSRTPSYLIKDIGNDGTAHLTH--GLRRCVTLLRSVMGVRGKSEWFLEPVDFVKLALVDYPRIIRRPMDLGTIRKKLEGGTY 2093
H G A TD + E+RASP K+T G P + G F ++ KP T + E ++ L F++ + + V G+G N +G FT+ G L + L +++AY PK + +R + P A T+ P++ + P P + + +P + A + A AA + APT +R S L + +G A L +R+C +L++++ KS FL PVD V LA+ DY ++I+ PMDLGT+R LE G Y
Sbjct: 211 HNNNGLHAENATDED-----ENRASPLASDKSTTKGSC--PIERKFDGFFQILTMKGKPAT-IPEKDVSLTFQKCDMDNVYLVRGTGENRFGVFTLQGLLDETSQELRLYKAYKPKDKTPVAKRTRPKAEPV-VKVEAQTAHVEKTPSKKQKVKVEPAYPIPQSITSSLAPSVAVDFAYVSKALGAAPTTTSAPTISYERMSNAARHRSERKRSLPAHLREEGLAELERVPAMRKCHNILKNLI-TNPKSVPFLVPVDPVALAIPDYFKVIKEPMDLGTVRGNLENGVY 489 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12036.1265.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig12036.1265.1 >prot_S-dermatodea_contig12036.1265.1 ID=prot_S-dermatodea_contig12036.1265.1|Name=mRNA_S-dermatodea_contig12036.1265.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=574bp MAATSTTWGLGTHKMTADISSSAPVTSPSAADSPIKAKSFSVMEGPSKESback to top mRNA from alignment at S-dermatodea_contig12036:655..3755- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig12036.1265.1 ID=mRNA_S-dermatodea_contig12036.1265.1|Name=mRNA_S-dermatodea_contig12036.1265.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3101bp|location=Sequence derived from alignment at S-dermatodea_contig12036:655..3755- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig12036:655..3755- >mRNA_S-dermatodea_contig12036.1265.1 ID=mRNA_S-dermatodea_contig12036.1265.1|Name=mRNA_S-dermatodea_contig12036.1265.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3444bp|location=Sequence derived from alignment at S-dermatodea_contig12036:655..3755- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |