mRNA_S-dermatodea_contig11891.1191.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
|
Overview
Homology
BLAST of mRNA_S-dermatodea_contig11891.1191.1 vs. uniprot
Match: D8LLZ5_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLZ5_ECTSI) HSP 1 Score: 186 bits (471), Expect = 3.830e-54 Identity = 89/127 (70.08%), Postives = 110/127 (86.61%), Query Frame = 3
Query: 3 MIDSMDTYFQVLAEN--QDKIVVVKVFAGFCRACKAFDRKYRALALDYEATGAEIKFYEMDWMQTRDLCKSLQ--VKKLPHLELYSGERGRLESFVCGPSKAGLLKDKLELLLADPSDPSLGTAPPP 371
+I + + YF+VL EN +D+IVV+K++AGFCRACKAFDRK+R L+LD++ GA +KF+EMDWMQTRDLCKSLQ VKKLPH+ELY GERGRLESFVCGPSK+ LLK+KL+ L+ADP+DPSLG AP P
Sbjct: 132 VISTAERYFEVLRENAQKDQIVVIKIYAGFCRACKAFDRKFRLLSLDFQEQGANVKFFEMDWMQTRDLCKSLQKKVKKLPHMELYVGERGRLESFVCGPSKSSLLKEKLDKLVADPADPSLGEAPIP 258
BLAST of mRNA_S-dermatodea_contig11891.1191.1 vs. uniprot
Match: A0A6H5JEA9_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEA9_9PHAE) HSP 1 Score: 188 bits (477), Expect = 3.040e-52 Identity = 90/127 (70.87%), Postives = 111/127 (87.40%), Query Frame = 3
Query: 3 MIDSMDTYFQVLAEN--QDKIVVVKVFAGFCRACKAFDRKYRALALDYEATGAEIKFYEMDWMQTRDLCKSLQ--VKKLPHLELYSGERGRLESFVCGPSKAGLLKDKLELLLADPSDPSLGTAPPP 371
+ID+ + YF+VL EN +D+IVV+K++AGFCRACKAFDRK+R L+LD++ GA +KF+EMDWMQTRDLCKSLQ VKKLPH+ELY GERGRLESFVCGPSK+ LLK+KL+ L+ADP+DPSLG AP P
Sbjct: 405 VIDTAERYFEVLRENAQKDQIVVIKIYAGFCRACKAFDRKFRLLSLDFQEQGANVKFFEMDWMQTRDLCKSLQKKVKKLPHMELYVGERGRLESFVCGPSKSSLLKEKLDKLVADPADPSLGEAPIP 531
BLAST of mRNA_S-dermatodea_contig11891.1191.1 vs. uniprot
Match: A0A2V3IJC0_9FLOR (Thioredoxin-like 2-1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJC0_9FLOR) HSP 1 Score: 90.9 bits (224), Expect = 1.160e-18 Identity = 42/110 (38.18%), Postives = 68/110 (61.82%), Query Frame = 3
Query: 3 MIDSMDTYFQVLAENQDKIVVVKVFAGFCRACKAFDRKYRALALDYEATGAEIKFYEMDWMQTRDLCKSLQVKKLPHLELYSGERGRLESFVCGPSKAGLLKDKLELLLA 332
+I ++ Y QVL E+ D +VV+KVFA +CR+C+A K A ++ + ++F++MD+ Q ++LC L V +P Y G G +E F CGP +A +L++K+E LA
Sbjct: 65 LIHGVEQYLQVLRESSDSLVVLKVFAPWCRSCRALTPKVNRFAREF----SNVRFFKMDYEQNKELCHRLGVASMPTFVFYWGVAGEIEKFSCGPQRAYILREKIEQCLA 170
BLAST of mRNA_S-dermatodea_contig11891.1191.1 vs. uniprot
Match: A0A7S3ATR9_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ATR9_9EUKA) HSP 1 Score: 89.7 bits (221), Expect = 3.900e-18 Identity = 43/107 (40.19%), Postives = 69/107 (64.49%), Query Frame = 3
Query: 6 IDSMDTYFQVLAE--NQDKIVVVKVFAGFCRACKAFDRKYRALALDYEATGAEIKFYEMDWMQTRDLCKSLQVKKLPHLELYSGERGRLESFVCGPSKAGLLKDKLE 320
ID D Y ++ E ++++VV+K FA +CRACKA K+ +A D+ +++F+E+ + + LCKSL +K LP++E+ G G++E F CGPSK L++KLE
Sbjct: 58 IDDTDAYEALIEEATRENRVVVIKFFASWCRACKAMSPKFTRIADDWP----DVEFHEIMFDNNKKLCKSLGIKILPYIEIIGGSGGKVEGFTCGPSKISRLQEKLE 160
BLAST of mRNA_S-dermatodea_contig11891.1191.1 vs. uniprot
Match: A0A7S4C0Q1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C0Q1_CHRCT) HSP 1 Score: 88.6 bits (218), Expect = 1.100e-17 Identity = 39/95 (41.05%), Postives = 69/95 (72.63%), Query Frame = 3
Query: 39 AENQDKIVVVKVFAGFCRACKAFDRKYRALALDYEATGAEIKFYEMDWMQTRDLCKSLQVKKLPHLELYSGERGRLESFVCGPSKAGLLKDKLEL 323
A+ ++++VV+KV+A +CRACKA KY+ +A D+ +++F ++ + ++LCKSL +K LP++E+ +G +G++E F CGPSK L++KLE+
Sbjct: 80 AKRENQVVVIKVYASWCRACKAMAPKYQRIAEDWP----DVEFCDILFDNNKNLCKSLGIKVLPYVEIIAGGKGKVEGFSCGPSKVSQLQEKLEV 170
BLAST of mRNA_S-dermatodea_contig11891.1191.1 vs. uniprot
Match: A0A7S3WN14_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WN14_EMIHU) HSP 1 Score: 84.3 bits (207), Expect = 6.510e-16 Identity = 40/95 (42.11%), Postives = 63/95 (66.32%), Query Frame = 3
Query: 39 AENQDKIVVVKVFAGFCRACKAFDRKYRALALDYEATGAEIKFYEMDWMQTRDLCKSLQVKKLPHLELYSGERGRLESFVCGPSKAGLLKDKLEL 323
AE++ ++V +K +A +CRACKA KY+ +A D+ EI+F E+ + + LCK L +K LP++E+ +G G++E F CGPSK L +KLE+
Sbjct: 98 AESESRVVCIKFYASWCRACKAMAPKYKRVADDWP----EIEFCEVLFDTNKALCKGLGIKVLPYIEVVAGSAGKVEGFSCGPSKISSLMEKLEV 188
BLAST of mRNA_S-dermatodea_contig11891.1191.1 vs. uniprot
Match: A0A7S3TUC7_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TUC7_9SPIT) HSP 1 Score: 82.4 bits (202), Expect = 8.180e-16 Identity = 38/95 (40.00%), Postives = 63/95 (66.32%), Query Frame = 3
Query: 39 AENQDKIVVVKVFAGFCRACKAFDRKYRALALDYEATGAEIKFYEMDWMQTRDLCKSLQVKKLPHLELYSGERGRLESFVCGPSKAGLLKDKLEL 323
A+ ++++VV+K +A +CRACKA KY +A D+ E++F EM + + LCK L +K LP++E+ +G G+++ F CGPSK L ++LE+
Sbjct: 32 AKAENRVVVIKFYASWCRACKAMGPKYVKVAQDWP----ELEFCEMLYDNNKKLCKELGIKVLPYIEIVAGNAGKVDGFSCGPSKISKLIERLEV 122
BLAST of mRNA_S-dermatodea_contig11891.1191.1 vs. uniprot
Match: A0A7S4A7N2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7N2_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 9.690e-16 Identity = 40/105 (38.10%), Postives = 67/105 (63.81%), Query Frame = 3
Query: 18 DTYFQVLAENQ-DKIVVVKVFAGFCRACKAFDRKYRALALDYEATGAEIKFYEMDWMQTRDLCKSLQVKKLPHLELYSGERGRLESFVCGPSKAGLLKDKLELLL 329
DT+ ++++ DK+V +K +AG+CRACK ++ LA ++ G E FYE+++ +DLC+ L +KKLP ++ + G G + + +CGPSK ++ KLE LL
Sbjct: 119 DTFLAAMSKSAGDKVVAIKFYAGWCRACKTIAPRFERLAKEF---GEEAAFYEIEFSANKDLCRRLDIKKLPCVQFFRGAEGHVATVMCGPSKFPDVRLKLEDLL 220
BLAST of mRNA_S-dermatodea_contig11891.1191.1 vs. uniprot
Match: A0A7S0J7Q1_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J7Q1_9EUKA) HSP 1 Score: 82.4 bits (202), Expect = 3.980e-15 Identity = 39/95 (41.05%), Postives = 63/95 (66.32%), Query Frame = 3
Query: 39 AENQDKIVVVKVFAGFCRACKAFDRKYRALALDYEATGAEIKFYEMDWMQTRDLCKSLQVKKLPHLELYSGERGRLESFVCGPSKAGLLKDKLEL 323
A ++K+V++K A +CRACKA KY+ +A D+ E++F E+ + + LCKSL +K LP++E+ G G++E F CGPSK L+++LE+
Sbjct: 109 ATRENKVVIIKFHASWCRACKAMAPKYQRVAEDWP----ELEFCEILFDNNKKLCKSLGIKILPYVEVIGGTLGKVEGFSCGPSKISRLQERLEV 199
BLAST of mRNA_S-dermatodea_contig11891.1191.1 vs. uniprot
Match: A0A7S2GHN9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2GHN9_9EUKA) HSP 1 Score: 81.6 bits (200), Expect = 9.000e-15 Identity = 39/94 (41.49%), Postives = 60/94 (63.83%), Query Frame = 3
Query: 39 AENQDKIVVVKVFAGFCRACKAFDRKYRALALDYEATGAEIKFYEMDWMQTRDLCKSLQVKKLPHLELYSGERGRLESFVCGPSKAGLLKDKLE 320
A +++ V +K++A +CRACKA KY +A D E + ++FYE+ + + LCKSL +K LP +E+ +G +G++ SF CGPSK L LE
Sbjct: 81 AAREERTVCIKIYATWCRACKAMGPKYERIAKDPEYS--HVEFYEIAFDDNKALCKSLGIKVLPVIEVVAGSKGKVTSFACGPSKMSKLTFALE 172 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11891.1191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11891.1191.1 >prot_S-dermatodea_contig11891.1191.1 ID=prot_S-dermatodea_contig11891.1191.1|Name=mRNA_S-dermatodea_contig11891.1191.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=133bp MIDSMDTYFQVLAENQDKIVVVKVFAGFCRACKAFDRKYRALALDYEATGback to top mRNA from alignment at S-dermatodea_contig11891:2394..3866- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11891.1191.1 ID=mRNA_S-dermatodea_contig11891.1191.1|Name=mRNA_S-dermatodea_contig11891.1191.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1473bp|location=Sequence derived from alignment at S-dermatodea_contig11891:2394..3866- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11891:2394..3866- >mRNA_S-dermatodea_contig11891.1191.1 ID=mRNA_S-dermatodea_contig11891.1191.1|Name=mRNA_S-dermatodea_contig11891.1191.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=798bp|location=Sequence derived from alignment at S-dermatodea_contig11891:2394..3866- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |