mRNA_S-dermatodea_contig1187.1173.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1187.1173.1 vs. uniprot
Match: D8LSM4_ECTSI (Alkyl transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM4_ECTSI) HSP 1 Score: 234 bits (596), Expect = 2.090e-73 Identity = 140/239 (58.58%), Postives = 152/239 (63.60%), Query Frame = 1
Query: 1 GRQFVTLYAFSTENWNRPASEVYFLMELMERTLQEQREGLRRNGIRLTAIGELHRLPPRLRSLIKAIQEES---------------------------------------------------------LPA--------TMTLCLAISYGGRAELAAAAREIAAEAAAGVLDPEDIDEDALGRRLSTTRLGIPDPDLVVRTSGESRLSNLLLWQAAYSELHVVSKAWPEFRRRDLVDAF 522
G +FVTLYAFSTENW RP EV F+M+LME TL EQR+ LRRNGIRLTAIGEL RLP RLRSL+ IQE+S LP TMTLCLAISYGGR+EL AAARE+AAEAAAG LDP DIDE AL RRLST RLGIPDPDLVVRTSGESRLSNLL+WQ+AYSEL VV KAWP+FRR DLV+AF
Sbjct: 115 GVEFVTLYAFSTENWRRPTGEVSFIMDLMEETLLEQRDSLRRNGIRLTAIGELDRLPARLRSLLLEIQEDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAPPLPQPVAAPPTPTMTLCLAISYGGRSELVAAARELAAEAAAGRLDPADIDEPALARRLSTARLGIPDPDLVVRTSGESRLSNLLVWQSAYSELCVVGKAWPDFRRPDLVEAF 353
BLAST of mRNA_S-dermatodea_contig1187.1173.1 vs. uniprot
Match: A0A6H5KLI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLI8_9PHAE) HSP 1 Score: 236 bits (601), Expect = 1.660e-71 Identity = 142/242 (58.68%), Postives = 154/242 (63.64%), Query Frame = 1
Query: 1 GRQFVTLYAFSTENWNRPASEVYFLMELMERTLQEQREGLRRNGIRLTAIGELHRLPPRLRSLIKAIQEES----------------------------------------------------------LP----------ATMTLCLAISYGGRAELAAAAREIAAEAAAGVLDPEDIDEDALGRRLSTTRLGIPDPDLVVRTSGESRLSNLLLWQAAYSELHVVSKAWPEFRRRDLVDAF 522
G +FVTLYAFSTENW RPA EV FLM+LME TL EQR+ LRRNGIRLT IGEL RLP RLRSL+ IQE+S LP ATMTLCLAISYGGR+ELAAAARE+A EAAAG LDP DIDE AL RRLST+RLGIPDPDLVVRTSGESRLSNLL+WQ+AYSEL VV KAWP+FRR DLV+AF
Sbjct: 362 GVEFVTLYAFSTENWRRPAGEVSFLMDLMEETLLEQRDSLRRNGIRLTVIGELDRLPARLRSLLLEIQEDSNXXXXXXXXXXXXXXXXXXXXGVPPSVAIPVAXXXXXXXXXXXXXXXXXXXXXXIAPPLPKQPVAAAPPTATMTLCLAISYGGRSELAAAARELAVEAAAGRLDPADIDEPALARRLSTSRLGIPDPDLVVRTSGESRLSNLLVWQSAYSELCVVGKAWPDFRRPDLVEAF 603
BLAST of mRNA_S-dermatodea_contig1187.1173.1 vs. uniprot
Match: A0A835ZI19_9STRA (Alkyl transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI19_9STRA) HSP 1 Score: 187 bits (474), Expect = 3.810e-56 Identity = 96/181 (53.04%), Postives = 128/181 (70.72%), Query Frame = 1
Query: 1 GRQFVTLYAFSTENWNRPASEVYFLMELMERTLQEQREGLRRNGIRLTAIGELHRLPPRLRSLIKAIQEESLPAT-------MTLCLAISYGGRAELAAAAREIAAEAAAGVLDPEDIDEDALGRRLSTTRLGIPDPDLVVRTSGESRLSNLLLWQAAYSELHVVSKAWPEFRRRDLVDAF 522
G Q+VTL+ FSTENW RPA+EV LM L+E ++ R +R+NGIRL IG+ RL L+ L++ +Q E+ A MT+CLA+SYGGR E+A AA+ +A A G L +D+ E+ L LSTT+ G+PDPDL++RTSGE R+SN LLWQAAYSEL+V +KAWP+F+ DLV+AF
Sbjct: 78 GVQYVTLFTFSTENWKRPAAEVASLMALLEHNIEANRRAMRQNGIRLVLIGQKERLSTGLQCLVEEVQRETSVADAQQSGDQMTVCLAVSYGGRDEIARAAKAVALAVAEGRLSADDVTEEVLQGYLSTTQAGVPDPDLIIRTSGEHRISNFLLWQAAYSELYVSAKAWPDFKAADLVEAF 258
BLAST of mRNA_S-dermatodea_contig1187.1173.1 vs. uniprot
Match: A0A4V1S5M1_9BACT (Isoprenyl transferase n=3 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4V1S5M1_9BACT) HSP 1 Score: 181 bits (459), Expect = 1.880e-54 Identity = 95/174 (54.60%), Postives = 128/174 (73.56%), Query Frame = 1
Query: 1 GRQFVTLYAFSTENWNRPASEVYFLMELMERTLQEQREGLRRNGIRLTAIGELHRLPPRLRSLIKAIQEESLPAT-MTLCLAISYGGRAELAAAAREIAAEAAAGVLDPEDIDEDALGRRLSTTRLGIPDPDLVVRTSGESRLSNLLLWQAAYSELHVVSKAWPEFRRRDLVDA 519
G +++TLYAFS+ENW RP SEV LM L++R L+E+ + L+R +RL AIG++ RLP + R LI IQ+E+ T +TL LA+SYGGR E+ AA+ +AA+AAAG + P +ID + RL T GIPDPDL+VRTSGE R+SN LLWQ +YSE+ +V K WP+FR++DL DA
Sbjct: 51 GVEYLTLYAFSSENWRRPESEVSALMGLLDRFLKEKAKDLQRQNVRLQAIGQIDRLPEKTRKLITKIQDETAGNTALTLVLALSYGGREEIVEAAKSLAADAAAGKISPAEIDSELFASRLQTA--GIPDPDLLVRTSGEMRVSNFLLWQISYSEMVIVRKFWPDFRQKDLFDA 222
BLAST of mRNA_S-dermatodea_contig1187.1173.1 vs. uniprot
Match: UPI00190AA498 (isoprenyl transferase n=1 Tax=Luteolibacter yonseiensis TaxID=1144680 RepID=UPI00190AA498) HSP 1 Score: 178 bits (452), Expect = 2.150e-53 Identity = 92/174 (52.87%), Postives = 129/174 (74.14%), Query Frame = 1
Query: 1 GRQFVTLYAFSTENWNRPASEVYFLMELMERTLQEQREGLRRNGIRLTAIGELHRLPPRLRSLIKAIQEESLPAT-MTLCLAISYGGRAELAAAAREIAAEAAAGVLDPEDIDEDALGRRLSTTRLGIPDPDLVVRTSGESRLSNLLLWQAAYSELHVVSKAWPEFRRRDLVDA 519
G +++TLYAFS+ENWNRPA+EV LM L++R L+E+ + L R +RL AIG+L RLP + R+LI+ IQE + T +TL LA+SYG R E+ +AA+ +A++A AG++DP DI + RL T G+PDPDL++RTSGE R+SN LLWQ +Y+E+ +V K WPEFR+ DL +A
Sbjct: 51 GVEYLTLYAFSSENWNRPAAEVTALMGLLDRFLKEKAKDLDRQNVRLLAIGQLDRLPAKTRALIEQIQERTTNHTALTLVLALSYGSREEIVSAAKSLASDAVAGIIDPTDITNELFASRLHTA--GMPDPDLLIRTSGEMRVSNFLLWQISYAEMVIVKKFWPEFRQGDLFEA 222
BLAST of mRNA_S-dermatodea_contig1187.1173.1 vs. uniprot
Match: UPI00198BEAB0 (Isoprenyl transferase n=1 Tax=Gloeobacteraceae cyanobacterium ES-bin-144 TaxID=2762589 RepID=UPI00198BEAB0) HSP 1 Score: 176 bits (446), Expect = 1.730e-52 Identity = 92/174 (52.87%), Postives = 125/174 (71.84%), Query Frame = 1
Query: 1 GRQFVTLYAFSTENWNRPASEVYFLMELMERTLQEQREGLRRNGIRLTAIGELHRLPPRLRSLIKAIQEESLP-ATMTLCLAISYGGRAELAAAAREIAAEAAAGVLDPEDIDEDALGRRLSTTRLGIPDPDLVVRTSGESRLSNLLLWQAAYSELHVVSKAWPEFRRRDLVDA 519
G +++TLYAFS+ENWNRPA+EV LM L++R L E+ + L + IRL AIG+L RLP + R+L+ I + +TL LA+SYGGR E+ +AAR +A +AAAG + P+DID RL T GIPDPDL+VRTSGE R+SN LLWQ +Y+E+ +V K WP+FRR DL+++
Sbjct: 51 GVEYLTLYAFSSENWNRPAAEVKALMSLLDRFLAEKAKDLDKQKIRLLAIGQLERLPNKTRALLDKIMARTADHKALTLVLALSYGGREEIVSAARSLATDAAAGAISPDDIDAPLFASRLQTH--GIPDPDLLVRTSGEMRVSNFLLWQISYAEIVIVKKFWPDFRRNDLIES 222
BLAST of mRNA_S-dermatodea_contig1187.1173.1 vs. uniprot
Match: A0A6N6P144_9BACT (Isoprenyl transferase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A6N6P144_9BACT) HSP 1 Score: 172 bits (437), Expect = 3.980e-51 Identity = 92/174 (52.87%), Postives = 126/174 (72.41%), Query Frame = 1
Query: 1 GRQFVTLYAFSTENWNRPASEVYFLMELMERTLQEQREGLRRNGIRLTAIGELHRLPPRLRSLIKAIQEESLPAT-MTLCLAISYGGRAELAAAAREIAAEAAAGVLDPEDIDEDALGRRLSTTRLGIPDPDLVVRTSGESRLSNLLLWQAAYSELHVVSKAWPEFRRRDLVDA 519
G +++TL+AFS+ENW+RPA+EV+ LM L+ER L+E+ + L R +RL AIG+L RLP + R+L+ +I + T MT+ LA+SYG R E+ AAAR +A + AAG L PE ID + RL TT GIPDPDL++RTSGE R+SN LLWQ +Y+E+ +V K WP+FR DL +A
Sbjct: 51 GVEYLTLFAFSSENWSRPAAEVHALMTLLERFLREKAKDLDRQNVRLQAIGQLDRLPAKTRALLDSIIARTASHTSMTMVLALSYGAREEIVAAARALATDTAAGRLLPEAIDAELFASRLQTT--GIPDPDLLIRTSGEMRISNFLLWQISYAEIIIVKKNWPDFREGDLFEA 222
BLAST of mRNA_S-dermatodea_contig1187.1173.1 vs. uniprot
Match: UPI0019930ADA (Isoprenyl transferase n=1 Tax=Flavobacterium sp. TaxID=239 RepID=UPI0019930ADA) HSP 1 Score: 173 bits (438), Expect = 4.110e-51 Identity = 92/174 (52.87%), Postives = 119/174 (68.39%), Query Frame = 1
Query: 1 GRQFVTLYAFSTENWNRPASEVYFLMELMERTLQEQREGLRRNGIRLTAIGELHRLPPR-LRSLIKAIQEESLPATMTLCLAISYGGRAELAAAAREIAAEAAAGVLDPEDIDEDALGRRLSTTRLGIPDPDLVVRTSGESRLSNLLLWQAAYSELHVVSKAWPEFRRRDLVDA 519
G F+TLYAFS ENWNRP EVY LMEL+ T+ ++ + L NG++L AIG L LPPR ++ L + I++ S+ + TL LA+SY R E+ AAR +A + G L+P DIDED RLST GIPDP+L++RTSGE R+SN LLWQ AYSEL+ K WP+FRR D +A
Sbjct: 56 GIPFLTLYAFSAENWNRPKLEVYALMELLVSTISKETKTLMENGVKLNAIGNLKSLPPRCIKQLNETIKKTSVNSNCTLTLALSYSSRWEITQAARSLALDVKEGKLEPADIDEDVFESRLSTA--GIPDPELMIRTSGEYRISNYLLWQLAYSELYFTPKLWPDFRREDFYEA 227
BLAST of mRNA_S-dermatodea_contig1187.1173.1 vs. uniprot
Match: A0A3N5VFZ4_9BACT (Isoprenyl transferase n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A3N5VFZ4_9BACT) HSP 1 Score: 172 bits (435), Expect = 7.980e-51 Identity = 92/174 (52.87%), Postives = 123/174 (70.69%), Query Frame = 1
Query: 1 GRQFVTLYAFSTENWNRPASEVYFLMELMERTLQEQREGLRRNGIRLTAIGELHRLPPRLRSLI-KAIQEESLPATMTLCLAISYGGRAELAAAAREIAAEAAAGVLDPEDIDEDALGRRLSTTRLGIPDPDLVVRTSGESRLSNLLLWQAAYSELHVVSKAWPEFRRRDLVDA 519
G +++TLYAFS+ENWNRP SEV LM+L++R L E+ + L++ IRL AIG+L RLP + R L+ K I E + +TL LA+SYG R E+ AA R +AA+A AG L +ID RL T GIPDPDL++RTSGE R+SN LLWQ +Y+E+ +V K WP+FRR DL++A
Sbjct: 51 GVEYLTLYAFSSENWNRPESEVKALMQLLDRFLAEKSKDLKKQNIRLQAIGQLDRLPEKTRKLLDKIIAETASHTALTLVLALSYGAREEIVAATRSLAADAEAGRLRSAEIDCTLFASRLQTA--GIPDPDLLIRTSGEMRVSNFLLWQISYAEIVIVKKFWPDFRRNDLIEA 222
BLAST of mRNA_S-dermatodea_contig1187.1173.1 vs. uniprot
Match: UPI0018690B5E (isoprenyl transferase n=1 Tax=Luteolibacter sp. NBU1238 TaxID=2776705 RepID=UPI0018690B5E) HSP 1 Score: 172 bits (435), Expect = 7.980e-51 Identity = 91/174 (52.30%), Postives = 123/174 (70.69%), Query Frame = 1
Query: 1 GRQFVTLYAFSTENWNRPASEVYFLMELMERTLQEQREGLRRNGIRLTAIGELHRLPPRLRSLIKA-IQEESLPATMTLCLAISYGGRAELAAAAREIAAEAAAGVLDPEDIDEDALGRRLSTTRLGIPDPDLVVRTSGESRLSNLLLWQAAYSELHVVSKAWPEFRRRDLVDA 519
G +++TLYAFS+ENWNRPA+EV LM L+ER L+E+ + L + ++L AIG L RLP R R+ + A I+ + ++TL LA+SYG R EL AAR +A +AAAG +DP DID D RL T GIPDPDL++RTSGE R+SN LLWQ +Y+E+ + K WP+F + DL +A
Sbjct: 51 GVEYLTLYAFSSENWNRPAAEVTALMALLERFLEEKADELMKQDVKLQAIGHLDRLPDRTRAKLNAAIERTAQNGSLTLVLALSYGSREELVEAARSLATDAAAGKIDPADIDGDLFASRLYTA--GIPDPDLLIRTSGELRVSNFLLWQISYAEIVIFKKFWPDFHQADLFEA 222 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1187.1173.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1187.1173.1 >prot_S-dermatodea_contig1187.1173.1 ID=prot_S-dermatodea_contig1187.1173.1|Name=mRNA_S-dermatodea_contig1187.1173.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=174bp GRQFVTLYAFSTENWNRPASEVYFLMELMERTLQEQREGLRRNGIRLTAIback to top mRNA from alignment at S-dermatodea_contig1187:7653..8835+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1187.1173.1 ID=mRNA_S-dermatodea_contig1187.1173.1|Name=mRNA_S-dermatodea_contig1187.1173.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1183bp|location=Sequence derived from alignment at S-dermatodea_contig1187:7653..8835+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1187:7653..8835+ >mRNA_S-dermatodea_contig1187.1173.1 ID=mRNA_S-dermatodea_contig1187.1173.1|Name=mRNA_S-dermatodea_contig1187.1173.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1044bp|location=Sequence derived from alignment at S-dermatodea_contig1187:7653..8835+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |