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Homology
BLAST of mRNA_S-dermatodea_contig11866.1169.1 vs. uniprot
Match: A0A6H5JEK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEK2_9PHAE) HSP 1 Score: 161 bits (407), Expect = 1.610e-38 Identity = 104/206 (50.49%), Postives = 120/206 (58.25%), Query Frame = 1
Query: 964 EREVRLTRAEWQGLQFGETISFATTYLHQQQQLASXXXXXXXXXXSVAEAPEKPGEREAVVAALAVLKAAHATSLAQAAMDPAGDGRPTGLEAGGFLERGREG--GEILGGGGXXXXXXXXXXXXXXXXXXXXXXAAWVEEGVRGVAGLLIVLGKGYQHLMQFRCPEAMKELERLPPQQYCTGWVLHQVGKAHFERADYANAKVCL 1575
E E+RLTRAEWQ +Q+ ET+S+A H Q + S A EKPGERE ++AALAV+KAAHATS+A AA A G T A R+G I GGGG EGVR VA LL+VL K YQHL QFRCPEA++EL RLPPQQYCTGWVLHQVG+A+FERADY NAK L
Sbjct: 508 EGELRLTRAEWQCVQYEETVSYAVR--HSGQLALAASAGAAADSPSTAADSEKPGERETIMAALAVVKAAHATSVALAARGEAEQGDTTTGWATKLQGSCRDGVGSPIRGGGGGARREGVGGSG----------------EGVRAVAALLLVLSKAYQHLTQFRCPEALQELGRLPPQQYCTGWVLHQVGRAYFERADYGNAKSAL 695
BLAST of mRNA_S-dermatodea_contig11866.1169.1 vs. uniprot
Match: D7FXT2_ECTSI (Putative subunit of the Anaphase Promoting Complex n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXT2_ECTSI) HSP 1 Score: 124 bits (310), Expect = 2.980e-27 Identity = 93/145 (64.14%), Postives = 103/145 (71.03%), Query Frame = 1
Query: 1141 VVAALAVLKAAHATSLAQAAMDPAGDGRPTGLEAGGFLERGREGGEILGGGGXXXXXXXXXXXXXXXXXXXXXXAAWVEEGVRGVAGLLIVLGKGYQHLMQFRCPEAMKELERLPPQQYCTGWVLHQVGKAHFERADYANAKVCL 1575
++AALAV+KAAHATS+A AA A G A E R+GG G XXXXXXXXXXXXXXXXX EGVR VA LL+VL K YQHLMQFRCPEA++EL RLPPQQYCTGWVLHQVG+A+FERADY NAK L
Sbjct: 1 MMAALAVVKAAHATSVALAARGEAEQGDTMTGWAAKLQESCRDGG-----GSPIRGXXXXXXXXXXXXXXXXXAGVGSGEGVRAVAALLLVLSKAYQHLMQFRCPEALQELGRLPPQQYCTGWVLHQVGRAYFERADYGNAKSAL 140
BLAST of mRNA_S-dermatodea_contig11866.1169.1 vs. uniprot
Match: A0A7S4QN69_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QN69_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 5.190e-9 Identity = 34/65 (52.31%), Postives = 44/65 (67.69%), Query Frame = 1
Query: 1381 GVRGVAGLLIVLGKGYQHLMQFRCPEAMKELERLPPQQYCTGWVLHQVGKAHFERADYANAKVCL 1575
GV+ + LL LG + L QFRC EA++ +LP QQ+ TGWV HQVG+A+FE ADY N+K L
Sbjct: 675 GVQAILELLCTLGAAQKLLCQFRCREALQIFHQLPFQQFNTGWVQHQVGRAYFEMADYQNSKRAL 739
BLAST of mRNA_S-dermatodea_contig11866.1169.1 vs. uniprot
Match: A0A7S4N5K4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N5K4_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 1.590e-8 Identity = 32/65 (49.23%), Postives = 43/65 (66.15%), Query Frame = 1
Query: 1381 GVRGVAGLLIVLGKGYQHLMQFRCPEAMKELERLPPQQYCTGWVLHQVGKAHFERADYANAKVCL 1575
GVR + LL LG + L Q+RC +A++ +LP Q+ TGWV HQVG+AHFE ADY +A+ L
Sbjct: 711 GVREILELLCTLGAAQRQLCQYRCQDALQIFHQLPHSQFDTGWVQHQVGRAHFEMADYHSAQRAL 775
BLAST of mRNA_S-dermatodea_contig11866.1169.1 vs. uniprot
Match: A0A7S3BSJ3_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BSJ3_9EUKA) HSP 1 Score: 67.4 bits (163), Expect = 2.540e-8 Identity = 32/67 (47.76%), Postives = 43/67 (64.18%), Query Frame = 1
Query: 1363 AAWVEEGVRGVAGLLIVLGKGYQHLMQFRCPEAMKELERLPPQQYCTGWVLHQVGKAHFERADYANA 1563
AA G R LL L GY+HL Q++C EA+ + LP +Q TGWVL+Q+G+A+FER YA+A
Sbjct: 86 AALTASGARSALALLDQLALGYRHLCQYKCGEAIAVFQGLPLRQKQTGWVLNQIGRAYFERVQYADA 152
BLAST of mRNA_S-dermatodea_contig11866.1169.1 vs. uniprot
Match: UPI0003C119B7 (cell division cycle protein 27 homolog isoform X4 n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=UPI0003C119B7) HSP 1 Score: 67.0 bits (162), Expect = 5.830e-8 Identity = 30/65 (46.15%), Postives = 42/65 (64.62%), Query Frame = 1
Query: 1372 VEEGVRGVAGLLIVLGKGYQHLMQFRCPEAMKELERLPPQQYCTGWVLHQVGKAHFERADYANAK 1566
+++ G+ LL +GKGY L + C EA+ L +LPP Y TGWVL Q+G+AHFE A+Y A+
Sbjct: 456 IQKAAAGLMTLLRDMGKGYLALCSYNCKEAINILSQLPPHHYNTGWVLCQIGRAHFELAEYMQAE 520
BLAST of mRNA_S-dermatodea_contig11866.1169.1 vs. uniprot
Match: UPI0006D9287C (cell division cycle protein 27 homolog isoform X2 n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=UPI0006D9287C) HSP 1 Score: 67.0 bits (162), Expect = 5.840e-8 Identity = 30/65 (46.15%), Postives = 42/65 (64.62%), Query Frame = 1
Query: 1372 VEEGVRGVAGLLIVLGKGYQHLMQFRCPEAMKELERLPPQQYCTGWVLHQVGKAHFERADYANAK 1566
+++ G+ LL +GKGY L + C EA+ L +LPP Y TGWVL Q+G+AHFE A+Y A+
Sbjct: 460 IQKAAAGLMTLLRDMGKGYLALCSYNCKEAINILSQLPPHHYNTGWVLCQIGRAHFELAEYMQAE 524
BLAST of mRNA_S-dermatodea_contig11866.1169.1 vs. uniprot
Match: A0A3D8QCW1_9HELO (TPR-like protein n=2 Tax=Coleophoma TaxID=453209 RepID=A0A3D8QCW1_9HELO) HSP 1 Score: 66.6 bits (161), Expect = 7.660e-8 Identity = 32/65 (49.23%), Postives = 42/65 (64.62%), Query Frame = 1
Query: 1375 EEGVRGVAGLLIVLGKGYQHLMQFRCPEAMKELERLPPQQYCTGWVLHQVGKAHFERADYANAKV 1569
EE V + GL LG GY L Q+ C +A+ LP QY T WVL Q+GKAH+E+A+YA+A+V
Sbjct: 488 EEAVEWLLGLFKRLGTGYFSLSQYACQDAISVFNALPKSQYETPWVLSQIGKAHYEQANYADAEV 552
BLAST of mRNA_S-dermatodea_contig11866.1169.1 vs. uniprot
Match: D8RCQ8_SELML (Uncharacterized protein HBT1-1 n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RCQ8_SELML) HSP 1 Score: 65.5 bits (158), Expect = 1.560e-7 Identity = 29/63 (46.03%), Postives = 42/63 (66.67%), Query Frame = 1
Query: 1378 EGVRGVAGLLIVLGKGYQHLMQFRCPEAMKELERLPPQQYCTGWVLHQVGKAHFERADYANAK 1566
EG + LL VLG+G++H+ + EA++ +LP QY TGWVL Q+G+A+FE DYA A+
Sbjct: 318 EGATELLALLKVLGEGFKHVCMYESQEALEAFAKLPQNQYETGWVLCQIGRAYFEMVDYAEAE 380
BLAST of mRNA_S-dermatodea_contig11866.1169.1 vs. uniprot
Match: A0A443PQ62_9MAGN (Cell division cycle protein 27 B isoform X1 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443PQ62_9MAGN) HSP 1 Score: 65.1 bits (157), Expect = 2.240e-7 Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 1
Query: 1363 AAWVEEGVRGVAGLLIVLGKGYQHLMQFRCPEAMKELERLPPQQYCTGWVLHQVGKAHFERADYANA 1563
A+ V G + GLL +LG+GY+ ++C +A++ +LP + Y TGWVL QVGKAHFE DY A
Sbjct: 423 ASKVGSGALELLGLLRILGEGYRLSCMYKCQDALEVYLKLPHEHYNTGWVLSQVGKAHFELVDYYEA 489
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 125.9 |
| Seed ortholog evalue | 5.3e-26 |
| Seed eggNOG ortholog | 2880.D7FXT2 |
| Preferred name | CDC27 |
| KEGG ko | ko:K03350 |
| KEGG Pathway | ko04110,ko04111,ko04113,ko04114,ko04120,ko04914,ko05166,map04110,map04111,map04113,map04114,map04120,map04914,map05166 |
| KEGG Module | M00389 |
| GOs | GO:0000003,GO:0000070,GO:0000151,GO:0000152,GO:0000209,GO:0000278,GO:0000280,GO:0000375,GO:0000377,GO:0000398,GO:0000819,GO:0001775,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005680,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0006139,GO:0006396,GO:0006397,GO:0006464,GO:0006508,GO:0006511,GO:0006725,GO:0006807,GO:0006810,GO:0006887,GO:0006996,GO:0007049,GO:0007050,GO:0007059,GO:0007088,GO:0007091,GO:0007275,GO:0007338,GO:0007343,GO:0007346,GO:0007389,GO:0008150,GO:0008152,GO:0008283,GO:0008356,GO:0008380,GO:0009056,GO:0009057,GO:0009504,GO:0009566,GO:0009653,GO:0009719,GO:0009725,GO:0009733,GO:0009790,GO:0009791,GO:0009793,GO:0009798,GO:0009888,GO:0009896,GO:0009933,GO:0009948,GO:0009949,GO:0009952,GO:0009987,GO:0010014,GO:0010015,GO:0010033,GO:0010071,GO:0010154,GO:0010467,GO:0010498,GO:0010564,GO:0010638,GO:0010965,GO:0015630,GO:0016043,GO:0016070,GO:0016071,GO:0016192,GO:0016567,GO:0016740,GO:0017156,GO:0019538,GO:0019787,GO:0019899,GO:0019902,GO:0019903,GO:0019941,GO:0019953,GO:0022402,GO:0022414,GO:0022622,GO:0030071,GO:0030154,GO:0030163,GO:0031145,GO:0031331,GO:0031461,GO:0031974,GO:0031981,GO:0032270,GO:0032436,GO:0032446,GO:0032501,GO:0032502,GO:0032940,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034399,GO:0034641,GO:0036211,GO:0042221,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043632,GO:0043900,GO:0043901,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044770,GO:0044772,GO:0044784,GO:0045055,GO:0045732,GO:0045786,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045930,GO:0045931,GO:0046483,GO:0046903,GO:0048285,GO:0048316,GO:0048364,GO:0048507,GO:0048508,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048532,GO:0048608,GO:0048731,GO:0048829,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051247,GO:0051276,GO:0051301,GO:0051603,GO:0051704,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0060467,GO:0060468,GO:0060471,GO:0061458,GO:0061630,GO:0061659,GO:0062033,GO:0065001,GO:0065007,GO:0070013,GO:0070647,GO:0070979,GO:0071704,GO:0071840,GO:0071849,GO:0071850,GO:0071851,GO:0080154,GO:0090068,GO:0090304,GO:0090421,GO:0097159,GO:0098813,GO:0099402,GO:0140014,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903047,GO:1903052,GO:1903364,GO:1905392,GO:1905818,GO:1905820,GO:1990234,GO:2000241,GO:2000242,GO:2001252 |
| EggNOG free text desc. | metaphase/anaphase transition of mitotic cell cycle |
| EggNOG OGs | COG0457@1,KOG1126@2759 |
| COG Functional cat. | JM |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01009,ko03036,ko04121 |
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Model size | 1575 |
| Cds size | 1563 |
| Stop | 0 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11866.1169.1 >prot_S-dermatodea_contig11866.1169.1 ID=prot_S-dermatodea_contig11866.1169.1|Name=mRNA_S-dermatodea_contig11866.1169.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=521bp
MTPAFQTPAAASDIRLNAGGGDGGTRASGAPAHHGNAIAGRGRGGGGEGR
LAMPGARPTRGAGGRRVGGRLSFSSAVGFDDGSGGEGGGEERVRGAAGVG
AGAARAGITPSTTTAAAHSRDFAASSLKKNSMRPPPPNAGSSSSTTPASA
ALAGRAARSAVSATAAAAASAWAGGGGAGAGATARASRNNHYATPMDVDA
GTPGQARSNPGVEAVTVGARRSSRDRGEGPGGGGGGPAAVATRTPAPRSS
RRPTTRATAKRASEGHGRQSPSSSSSASASASAASKAVPVPMPLPAPAKA
SRGGRDPAAARAGAREGEREVRLTRAEWQGLQFGETISFATTYLHQQQQL
ASAAAAAAAAAASVAEAPEKPGEREAVVAALAVLKAAHATSLAQAAMDPA
GDGRPTGLEAGGFLERGREGGEILGGGGGGREGGVGGGEGGEGGEGGDGG
AAWVEEGVRGVAGLLIVLGKGYQHLMQFRCPEAMKELERLPPQQYCTGWV
LHQVGKAHFERADYANAKVCL back to topmRNA from alignment at S-dermatodea_contig11866:658..6610+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig11866.1169.1 ID=mRNA_S-dermatodea_contig11866.1169.1|Name=mRNA_S-dermatodea_contig11866.1169.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5953bp|location=Sequence derived from alignment at S-dermatodea_contig11866:658..6610+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GGCGGAGCGTTCATGACCCCCGCCTTCCAAACCCCGGCGGCCGCCTCCGA
CATTCGGCTTAACGCCGGAGGGGGCGATGGCGGCACCCGCGCCAGCGGAG
CACCCGCTCACCACGGCAACGCTATCGCAGGAAGGGGCCGAGGAGGGGGG
GGGGAAGGGAGGCTGGGTGCATCGGCGGTGGCGGCTAGAGCTGGAGCGGG
AGGCGTTGGTGGAGCCGGAGGTAGGAGCGCAGTTAACGTAAGAGGTAAAA
CCGGGGGTAGAGCTACCGAAGCTGGGGCGGCGGCTGCCGGGGCAGCGACG
CCGGCAGCGGCGGCGTCAACTGGGGGAAGCGGGGCCGTTGAGCACCTCCT
CGACCTTGGCGCGCGCCTGGGCTCCTTTTTCCCCCCGGCCGTGGGCCCGG
GGCCTGTTCCGGGGCTTGAACAGCTGCTGCAGGAGGCGACGGACGCCGCG
GCCTACAGCGCAAGAGGGCGGGTGTACCCGTCGACTCCCGGCGGCCCCGG
GTTTCCTGGAGAGATGGGCGCCGGCGGTTCGGCGGCGGCGGGAGGGGGGC
GAGGCGTGACTGGGGCTGGGGCTAGGGCTGACCCTGGGGTGGCAAGTGTC
GGGGTGGGGAGATTTCTTGCGACCCCAGGGCTGACCCCTATCCCGAATGC
GCGGACACCGTATGCCGGTGGGGTTGGTGGTGGGGATGCCGGCGGCGGTG
GTGGTGGAGGGGATATGGAGGAAGACACGCCTTCCATGTTTCTGACGGGG
CTGTTGAGAGGCTCCCCCGGCCATGCCGGCGGCGGCAGCAGCGCTGGCGT
TGGCGTTGGGGTTGGAGTTGGAGTTGGCGGCGGCGGTGGCGGTGGCGGCG
GCGGCATGCCTTCTATGAGGGAAACGACGCCAACCCCTTCGCGCGGAGAC
GGGGCCGGCGTCTCGTCGTCTGCCGCGGCCGCGGCTGGGGTTAGGATGTC
CTCGAGGATGGCTAGCGCCGGTACGGACCTGGCATCGATCGGCGGGGGTG
CTCGAGAAGCGGCGGCTGGAGGCGACGCGGTGGTGATAGCGATGCCCGGG
GCTAGGCCGACTAGGGGTGCCGGGGGCAGGAGGGTCGGAGGAAGACTGTC
GTTCTCTTCGGCGGTCGGCTTTGACGATGGGAGTGGGGGGGAAGGGGGGG
GCGAGGAGCGGGTGAGGGGTGCGGCGGGGGTGGGGGCGGGGGCGGCGAGG
GCTGGAAGTAGAAGGTGGGCTGGGGTGGGATCGCGTGCTGGGAGTTGTGT
TTGTGTGTGTGTGCTTTCGGTCGTTATCGGGAGTTGTGGTGTTTGCTGTT
ACTGGGTGGTAGCGTTTTTTGTCCTCACAAGTCAAACAGTTTTGCATGGG
CACCTTTATGGTATTCACCAGAGATGAGCAAAATGTGGTTTGTAGCGAAG
GTTTTCCCCCCATCAGTTACTTATTAAACATGTAAAGGCTGTGGTAGGGT
GTTAGCCTCCTTCGCCGCAGCCCTTGTATACAAGTATTTTAGATCCTTTA
ACGATTCTCTTTTTCCTCAGACCACATTTTATTACCATGAATACCCAACT
ATTCCGACCATCAGTACCCAAAATAGCAAAAATCTCACGAAAACAAAAAA
AACACACGAGATATGGCCATACCCAAGAACGTGGACCTTGAAATATCGAT
AATTCCAGCCTATTTTGATTTCTCTAGTTCGAGACTTGTGGCAAATTTGG
ACCTGTTAAAGTTAAAGTTAACTATGGTATAGTCCTCCGTACTATTAATA
CTGTTATGTTTCGCTGTAGTTTTCATTTCGTCCTTTTTCGATCTTGTCTC
CCTAAGAGACACACTTTTACCCCCTCATTCGAGCGCTGCTCTCGAGCGCT
GTGGGACCTCCATTTACCTACCTTAAAATACCTTAAATAACTTCTACAAT
AGTTACTTTCGACTCTACTTGTAGCGTGTTTTTGTTTCGCAGGAGTTCTG
AGTTCTATGCCCTGTGTCGCGTGTGTGTCGCAACCAGTGAACCCTTCGAC
GCTACTGCTATCGTCTTTGTTCCCTGCATTTCTGCGTTTAGCATGTTCTC
AATCGTGGCGGTAAGTTCTTTCTCGTAGTAGCTTCGGCTTGGTTCGGGCC
CCACGCCCTCGGCAGGGGACATACGGTAGTCTCCCTGGGTACTTTTTGTA
TGGTCTCGTTGTAGTGGTCGCATTATTAATAGTAGTAGTGGTCGCAATTC
TCTGTCGTATTTTATTTTGTCGCTGTGCGCACTCATTTATCTTCACGTCT
GTGTGTCTTTGCCGCGAGCCGCTCGGAGTAATGCTTCCGTCCTTTTTTTT
CACGCGGTGTTTGGTTTCGCCCGACGTCCGTTTCTTTGTAAAAAGAAAAA
CACCACCCGTAGTCACGACCAATCGACGCGAAAACGGACACTCAGCGCCA
AACCTGTGAACCCTACGTCCCCCCCGTGCCACCCCTACCCCTACGCACTG
TCCTCCTCACGCGCACGTGCACGCGCGCGCTTTCTCTCTTCCTCCCTTAA
AAAAATGAAACCGCCGTTCGTCACAGGCGACCAGTCACCCCGAGCACAAC
AACAGCGGCAGCTCACTCGAGAGACTTCGCCGCATCGTCCTTGAAGAAGA
ACTCGATGCGACCCCCTCCCCCTAACGCAGGTTCCTCTTCCTCGACCACG
CCTGCGAGCGCCGCGCTAGCCGGCCGCGCGGCGCGATCGGCCGTGTCCGC
AACAGCAGCAGCAGCAGCGTCGGCGTGGGCGGGGGGCGGAGGAGCAGGAG
CAGGAGCTACGGCCAGAGCGTCGAGAAACAACCACTACGCCACGCCAATG
GACGTCGATGCTGGCACCCCGGGCCAAGCGCGGAGCAACCCGGGCGTAGA
GGCTGTTACCGTAGGCGCGAGAAGATCGTCCCGGGACAGGGGAGAAGGCC
CCGGCGGCGGCGGCGGCGGACCCGCCGCCGTGGCTACTAGGACACCGGCC
CCGCGCTCGAGCCGCCGGCCCACCACCCGAGCTACCGCTAAGAGAGCGAG
CGAGGGGCATGGGAGGCAATCACCGTCGTCCTCTTCCTCCGCGTCAGCAT
CAGCGTCGGCTGCTTCGAAGGCGGTGCCGGTGCCCATGCCGTTGCCCGCG
CCCGCGAAAGCTTCTCGAGGCGGAAGGGGTTCCGTCGGCGTGGACGTGGG
AGTGGATCCGGACGTTGGAGTGGAAGGAGACCCGGCAGCGGCGAGAGCGG
GAGCGCGGGAAGGAGAGCGGGAGGTCCGGCTTACGAGAGCGGAATGGCAA
GGGTTGCAGTTCGGCGAGACGATCTCGTTCGCGACGACCTATCTCCACCA
ACAGCAGCAGCTGGCCTCCGGTGTCAGCGGAAACGGCAGCGCCGGGATAG
TCGATCGCCGATTGACGGGTAAGGCCACAGCCGCCGCTGCTGCTGCTGCT
GCTGCTGCTAGTGTTGCCGAGGCACCCGAGAAGCCGGGGGAGCGAGAGGC
GGTCGTGGCCGCCCTCGCGGTGCTAAAGGCAGCGCACGCGACTAGCCTGG
CTCAGGCGGCCATGGATCCGGCGGGGGATGGTCGACCTACGGGGCTAGAG
GCGGGGGGTTTCCTTGAGCGAGGCAGGGAGGGTGGGGAGATTCTAGGGGG
TGGGGGAGGGGGTAGAGAGGGGGGAGTTGGTGGAGGTGAGGGTGGGGAGG
GGGGGGAGGGGGGTGATGGCGGGGCGGCGTGGGTGGAGGAAGGCGTGAGG
GGAGTGGCGGGGCTATTGATCGTGCTTGGGAAGGGGTATCAGCACCTGAT
GCAGTTTCGGTGTCCTGAGGTGAGGGCGTTGATTGTGTGTGTGTGTGTGT
TTTTGTGTGTTTGTTTGATCGATTGATGAATGGATTGGTTGATTGATTGA
TTGATTGATTGATTGATTGATTGATTGATTGATTAATTGGTTGATTGATT
GATTGATGGATTTATTGGTTGATAGACTGCTGTGACATTTATTGATTGAT
GCCTTGGTTGATTGGTTGACTGTTACACTCAATTGATAGAAGGGTCGATG
GATTGGTTGATTGATTTGATTGGTTGATGGAACTATGACACTTTCAACTG
ACCGGCCCGCCAATGGTTGCCGATCCCAGATGACAAGTCGATAAATCGAA
AGCCTACGGCATTACCTATATAACACATAAGTTAATTGAACTCAACGGTC
GAATCAGAGAGGACATGCCTCGGACATTGCGTCTACTAACCAGCCCCCTC
TCCGACAGCAAGCGCTCACCACACTCGTGGTGTGGTTGGTCACTGGGGAA
GGTTACTTTGCGGCGGAAATCATTGTCACTATTGTAGTAGGTAGCTACAT
CTACGCCCGTGAGGTGTGCGTGGTCGCTCAACTCTAAAATCAAGTTTTCG
GCCTCAAAATCGTATAGGAGTTTAGTGTACAAAATCGGCCTCAAAATCGT
ATAAGAAATAGCGTGGAAAAAGGTTCAAAGCGGTACCAGTTATAGTAGGT
AGCCACGGCTACGCCCGTGAGGTAAAAAATCCTACTCTTTTCAACATGGC
CTCAACACCGTATAGGAGTTTAGCACAAAAAATCGGCCCTCAAATCGTCT
AGGAGTGTAGCGTGGGATTAGCGTGGTGGTCTACACAAAAATCGCTATTA
AAAACCTTTCAAAGCGCTATTAATTTATTAACTAGTTGCAAGCCACGGCT
GTCGCCCGTGAGGTGTGCGTTGGCAGGACGATGTGCGGGTTAGGTTTGGG
ATACGGTGTGGCGACCCACGGCAGGCGTATCGCTATCATATGCATTTGAA
AATGTAAATCGTATCGGATTTAGTATACCCAATCCGGCTTCAGTTTGAGA
ACGTAAATCGTATAGGATTTTACCAAAGAAATGGTTGACGCTTGTATTAA
TTCATAAGGATATTATCTTTCGTTCGTTTCGTTTCGTTGTGGTGTGTGTG
TGTTTAGTTTCCTGTAAAAATGCAGAGATCCAAGGAGTCGGCGATATAGA
GCTGGGGGAGCGCTGAATGGGCCGATTGTCGGTTGTTGCATCGCATGCAT
GATACGATACCATACGATACGGTAACTGCTGTGACATACACCGTCGTGAG
TCCTCTAGAAAATACAATGATTTAAAAAACATAGGGCGACCATTGGGGTA
CTACTGTCCCACCTTTTCACAAGGGAAGATGGTCCAAGCTGTTAACCCTT
TTGGTACTAGCCACCTGTTTGGAGCGCCTGTTAGCACGTAATGAGGCGTG
CTTGAACCGGGGCCCTNNNNNNNNNNGCGCAAGGGAAACGGGGCTGTAGC
TGTCGATTGGCATCGAGAGAGTTTTGGGTCGTTTCGGAGAGCCATATTAA
TTATTAATACTAATATGATATTAATAGTGCTAATTTAATAGTACCAAAAG
GGTTATTAAACACACCTATGGAGGCTCATTTGTTACGTTTGCTGCTACGC
CCCCCAGAAATGTATACAGATTTCAGAAACATGAGCGAGCGTTGGGGTCC
CACCTTTTCTGCTACCCCCCCCTCCCCCCTGTAAAAACTCAACGGTAAAG
GATAGACAAAAGCCAGTATGATAAGACTAACTAAAATACGGAAACGAGGA
GGACAGACAGAAAAACGGGTAGACGTCATCGCGATCGCCCCGCAGCGCCG
CCCAGCGTCGCCTGACGGCAGGCTCGCGTGCGCGGCGCGCGCGCTACCAC
CCCCACCCCGCCCACGCGTCCAAAATATGGAAGATGAAAAAATCCCCAGC
TTCCGGGAGACAATGGTTAGGTGGAATGGAAATATGGAATGATGCATGGG
AATGGGTGAAAGCGCCCCTTCCCCTACCTACCCACTCACCCCCTCTCTCT
TTCTGCCTATGTTTGTTTTGAAAAACATGTTCTCAGGCCATGAAGGAACT
CGAGCGACTACCGCCACAGCAGTACTGCACTGGCTGGGTGTTGCACCAAG
TGGGGAAGGCGCACTTCGAGCGGGCGGACTACGCCAACGCCAAGGTCTGC
CTG back to topCoding sequence (CDS) from alignment at S-dermatodea_contig11866:658..6610+ >mRNA_S-dermatodea_contig11866.1169.1 ID=mRNA_S-dermatodea_contig11866.1169.1|Name=mRNA_S-dermatodea_contig11866.1169.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3126bp|location=Sequence derived from alignment at S-dermatodea_contig11866:658..6610+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGACCCCCGCCTTCCAAACCCCGGCGGCCGCCTCCGACATTCGGCTTAA
CGCCGGAGGGGGCGATGGCGGCACCCGCGCCAGCGGAGCACCCGCTCACC
ACGGCAACGCTATCGCAGGAAGGGGCCGAGGAGGGGGGGGGGAAGGGAGG
CTGGATGACCCCCGCCTTCCAAACCCCGGCGGCCGCCTCCGACATTCGGC
TTAACGCCGGAGGGGGCGATGGCGGCACCCGCGCCAGCGGAGCACCCGCT
CACCACGGCAACGCTATCGCAGGAAGGGGCCGAGGAGGGGGGGGGGAAGG
GAGGCTGGCGATGCCCGGGGCTAGGCCGACTAGGGGTGCCGGGGGCAGGA
GGGTCGGAGGAAGACTGTCGTTCTCTTCGGCGGTCGGCTTTGACGATGGG
AGTGGGGGGGAAGGGGGGGGCGAGGAGCGGGTGAGGGGTGCGGCGGGGGT
GGGGGCGGGGGCGGCGAGGGCTGGAACGATGCCCGGGGCTAGGCCGACTA
GGGGTGCCGGGGGCAGGAGGGTCGGAGGAAGACTGTCGTTCTCTTCGGCG
GTCGGCTTTGACGATGGGAGTGGGGGGGAAGGGGGGGGCGAGGAGCGGGT
GAGGGGTGCGGCGGGGGTGGGGGCGGGGGCGGCGAGGGCTGGAATCACCC
CGAGCACAACAACAGCGGCAGCTCACTCGAGAGACTTCGCCGCATCGTCC
TTGAAGAAGAACTCGATGCGACCCCCTCCCCCTAACGCAGGTTCCTCTTC
CTCGACCACGCCTGCGAGCGCCGCGCTAGCCGGCCGCGCGGCGCGATCGG
CCGTGTCCGCAACAGCAGCAGCAGCAGCGTCGGCGTGGGCGGGGGGCGGA
GGAGCAGGAGCAGGAGCTACGGCCAGAGCGTCGAGAAACAACCACTACGC
CACGCCAATGGACGTCGATGCTGGCACCCCGGGCCAAGCGCGGAGCAACC
CGGGCGTAGAGGCTGTTACCGTAGGCGCGAGAAGATCGTCCCGGGACAGG
GGAGAAGGCCCCGGCGGCGGCGGCGGCGGACCCGCCGCCGTGGCTACTAG
GACACCGGCCCCGCGCTCGAGCCGCCGGCCCACCACCCGAGCTACCGCTA
AGAGAGCGAGCGAGGGGCATGGGAGGCAATCACCGTCGTCCTCTTCCTCC
GCGTCAGCATCAGCGTCGGCTGCTTCGAAGGCGGTGCCGGTGCCCATGCC
GTTGCCCGCGCCCGCGAAAGCTTCTCGAGGCGGAAGGGTCACCCCGAGCA
CAACAACAGCGGCAGCTCACTCGAGAGACTTCGCCGCATCGTCCTTGAAG
AAGAACTCGATGCGACCCCCTCCCCCTAACGCAGGTTCCTCTTCCTCGAC
CACGCCTGCGAGCGCCGCGCTAGCCGGCCGCGCGGCGCGATCGGCCGTGT
CCGCAACAGCAGCAGCAGCAGCGTCGGCGTGGGCGGGGGGCGGAGGAGCA
GGAGCAGGAGCTACGGCCAGAGCGTCGAGAAACAACCACTACGCCACGCC
AATGGACGTCGATGCTGGCACCCCGGGCCAAGCGCGGAGCAACCCGGGCG
TAGAGGCTGTTACCGTAGGCGCGAGAAGATCGTCCCGGGACAGGGGAGAA
GGCCCCGGCGGCGGCGGCGGCGGACCCGCCGCCGTGGCTACTAGGACACC
GGCCCCGCGCTCGAGCCGCCGGCCCACCACCCGAGCTACCGCTAAGAGAG
CGAGCGAGGGGCATGGGAGGCAATCACCGTCGTCCTCTTCCTCCGCGTCA
GCATCAGCGTCGGCTGCTTCGAAGGCGGTGCCGGTGCCCATGCCGTTGCC
CGCGCCCGCGAAAGCTTCTCGAGGCGGAAGGGACCCGGCAGCGGCGAGAG
CGGGAGCGCGGGAAGGAGAGCGGGAGGTCCGGCTTACGAGAGCGGAATGG
CAAGGGTTGCAGTTCGGCGAGACGATCTCGTTCGCGACGACCTATCTCCA
CCAACAGCAGCAGCTGGCCTCCGACCCGGCAGCGGCGAGAGCGGGAGCGC
GGGAAGGAGAGCGGGAGGTCCGGCTTACGAGAGCGGAATGGCAAGGGTTG
CAGTTCGGCGAGACGATCTCGTTCGCGACGACCTATCTCCACCAACAGCA
GCAGCTGGCCTCCGCCGCCGCTGCTGCTGCTGCTGCTGCTGCTAGTGTTG
CCGAGGCACCCGAGAAGCCGGGGGAGCGAGAGGCGGTCGTGGCCGCCCTC
GCGGTGCTAAAGGCAGCGCACGCGACTAGCCTGGCTCAGGCGGCCATGGA
TCCGGCGGGGGATGGTCGACCTACGGGGCTAGAGGCGGGGGGTTTCCTTG
AGCGAGGCAGGGAGGGTGGGGAGATTCTAGGGGGTGGGGGAGGGGGTAGA
GAGGGGGGAGTTGGTGGAGGTGAGGGTGGGGAGGGGGGGGAGGGGGGTGA
TGGCGGGGCGGCGTGGGTGGAGGAAGGCGTGAGGGGAGTGGCGGGGCTAT
TGATCGTGCTTGGGAAGGGGTATCAGCACCTGATGCAGTTTCGGTGTCCT
GAGCCGCCGCTGCTGCTGCTGCTGCTGCTGCTAGTGTTGCCGAGGCACCC
GAGAAGCCGGGGGAGCGAGAGGCGGTCGTGGCCGCCCTCGCGGTGCTAAA
GGCAGCGCACGCGACTAGCCTGGCTCAGGCGGCCATGGATCCGGCGGGGG
ATGGTCGACCTACGGGGCTAGAGGCGGGGGGTTTCCTTGAGCGAGGCAGG
GAGGGTGGGGAGATTCTAGGGGGTGGGGGAGGGGGTAGAGAGGGGGGAGT
TGGTGGAGGTGAGGGTGGGGAGGGGGGGGAGGGGGGTGATGGCGGGGCGG
CGTGGGTGGAGGAAGGCGTGAGGGGAGTGGCGGGGCTATTGATCGTGCTT
GGGAAGGGGTATCAGCACCTGATGCAGTTTCGGTGTCCTGAGGCCATGAA
GGAACTCGAGCGACTACCGCCACAGCAGTACTGCACTGGCTGGGTGTTGC
ACCAAGTGGGGAAGGCGCACTTCGAGCGGGCGGACTACGCCAACGCCAAG
GTCTGCCTGGCCATGAAGGAACTCGAGCGACTACCGCCACAGCAGTACTG
CACTGGCTGGGTGTTGCACCAAGTGGGGAAGGCGCACTTCGAGCGGGCGG
ACTACGCCAACGCCAAGGTCTGCCTG back to top
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