mRNA_S-dermatodea_contig11862.1166.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11862.1166.1 vs. uniprot
Match: D8LED2_ECTSI (Ig-like protein, group 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED2_ECTSI) HSP 1 Score: 198 bits (503), Expect = 4.720e-59 Identity = 90/158 (56.96%), Postives = 115/158 (72.78%), Query Frame = 1
Query: 4 CNPNPCLNGGSCERDVGGGHVCSCPYVYGGMACQTDTSFLAEFYISVSFVGTWTPARQDVFHSAASRWAEVITHVPCGGNREH--PPGELLITATLDTIDGVGGTLGSAGPDLVWTDCNTISLTGSMTFDIADVAAMEADGILKGVVLHEMGHVIGVG 471
C+PNPC+NGGSCE D GG+ CSC YG M C+TD + ++EF+I+V F+G+WT R+ VF SAA+RW+EV+T +PC G + GEL IT+TL+ IDGV GTLG AGP ++DC IS +G MTFDI D+A ME G +GV+LHEMGHVIG G
Sbjct: 127 CDPNPCMNGGSCEVDPNGGYTCSCGSSYGAMMCETDVTGMSEFFITVDFLGSWTDERKGVFQSAANRWSEVLTRIPCSGTNGNRGAAGELTITSTLEPIDGVYGTLGFAGPRGTYSDCRGISYSGEMTFDIDDIAEMERQGTFEGVILHEMGHVIGTG 284
BLAST of mRNA_S-dermatodea_contig11862.1166.1 vs. uniprot
Match: D8LED3_ECTSI (WSC domain protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LED3_ECTSI) HSP 1 Score: 202 bits (515), Expect = 1.290e-58 Identity = 91/158 (57.59%), Postives = 115/158 (72.78%), Query Frame = 1
Query: 4 CNPNPCLNGGSCERDVGGGHVCSCPYVYGGMACQTDTSFLAEFYISVSFVGTWTPARQDVFHSAASRWAEVITHVPCGGNREH--PPGELLITATLDTIDGVGGTLGSAGPDLVWTDCNTISLTGSMTFDIADVAAMEADGILKGVVLHEMGHVIGVG 471
CNPNPC+NGGSCE D GG+ CSC YGGM C+TD + ++EF+I+V F+GTW+ R+ VF AA+RW+E++TH+PC G + GEL IT+TL+ IDGV GTLG AGP + DC IS +G MTFDI D+A ME G +GV+LHEMGHVIG G
Sbjct: 401 CNPNPCMNGGSCEVDPNGGYTCSCGSSYGGMMCETDVTGMSEFFITVDFLGTWSDERKGVFQRAANRWSEILTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTYNDCRGISYSGEMTFDIDDIAEMERQGTFEGVILHEMGHVIGTG 558
BLAST of mRNA_S-dermatodea_contig11862.1166.1 vs. uniprot
Match: D8LED1_ECTSI (PR1-like metalloprotease n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED1_ECTSI) HSP 1 Score: 202 bits (515), Expect = 1.530e-58 Identity = 91/158 (57.59%), Postives = 115/158 (72.78%), Query Frame = 1
Query: 4 CNPNPCLNGGSCERDVGGGHVCSCPYVYGGMACQTDTSFLAEFYISVSFVGTWTPARQDVFHSAASRWAEVITHVPCGGNREH--PPGELLITATLDTIDGVGGTLGSAGPDLVWTDCNTISLTGSMTFDIADVAAMEADGILKGVVLHEMGHVIGVG 471
CNPNPC+NGGSCE D GG+ CSC YGGM C+TD + ++EF+I+V F+GTW+ R+ VF AA+RW+E++TH+PC G + GEL IT+TL+ IDGV GTLG AGP + DC IS +G MTFDI D+A ME G +GV+LHEMGHVIG G
Sbjct: 414 CNPNPCMNGGSCEVDPNGGYTCSCGSSYGGMMCETDVTGMSEFFITVDFLGTWSDERKGVFQRAANRWSEILTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTYNDCRGISYSGEMTFDIDDIAEMERQGTFEGVILHEMGHVIGTG 571
BLAST of mRNA_S-dermatodea_contig11862.1166.1 vs. uniprot
Match: D7G7J6_ECTSI (Putative zinc metalloendopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J6_ECTSI) HSP 1 Score: 202 bits (515), Expect = 2.150e-58 Identity = 91/158 (57.59%), Postives = 115/158 (72.78%), Query Frame = 1
Query: 4 CNPNPCLNGGSCERDVGGGHVCSCPYVYGGMACQTDTSFLAEFYISVSFVGTWTPARQDVFHSAASRWAEVITHVPCGGNREH--PPGELLITATLDTIDGVGGTLGSAGPDLVWTDCNTISLTGSMTFDIADVAAMEADGILKGVVLHEMGHVIGVG 471
CNPNPC+NGGSCE D GG+ CSC YGGM C+TD + ++EF+I+V F+GTW+ R+ VF AA+RW+E++TH+PC G + GEL IT+TL+ IDGV GTLG AGP + DC IS +G MTFDI D+A ME G +GV+LHEMGHVIG G
Sbjct: 505 CNPNPCMNGGSCEVDPNGGYTCSCGSSYGGMMCETDVTGMSEFFITVDFLGTWSDERKGVFQRAANRWSEILTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTYNDCRGISYSGEMTFDIDDIAEMERQGTFEGVILHEMGHVIGTG 662
BLAST of mRNA_S-dermatodea_contig11862.1166.1 vs. uniprot
Match: D8LJN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJN8_ECTSI) HSP 1 Score: 181 bits (459), Expect = 1.510e-51 Identity = 87/162 (53.70%), Postives = 109/162 (67.28%), Query Frame = 1
Query: 1 ECNPNPCLNGGSCERDVGGGHVCSCPYVYGGMACQTDTSFLAEFYISVSFVGTWTPA----RQDVFHSAASRWAEVITHVPCGGNR-EHPPGELLITATLDTIDGVGGTLGSAGPDLVWTDCNTISLTGSMTFDIADVAAMEADGILKGVVLHEMGHVIGVG 471
ECNPNPCLN GSCE D GG+ CSC YGGM C+TDT+ L EF+I++ F GTW A R+D+F +AA RW +V+TH+PC G E GEL+I+ T IDG GG GP V+ DC +S G M FD D+ +E DGIL+G+V+HE+GHVIGVG
Sbjct: 382 ECNPNPCLNEGSCEVDPNGGYSCSCSSSYGGMNCETDTTGLPEFFITLEFDGTWDGALDATRKDIFQTAAKRWEKVVTHIPCTGTHPEGATGELIISVTQHEIDGSGGQFALGGPSDVYGDCPGVSYMGVMIFDSDDIDDLEDDGILEGLVVHEIGHVIGVG 543
BLAST of mRNA_S-dermatodea_contig11862.1166.1 vs. uniprot
Match: A0A359F4V1_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A359F4V1_9ACTN) HSP 1 Score: 96.3 bits (238), Expect = 1.100e-20 Identity = 57/129 (44.19%), Postives = 77/129 (59.69%), Query Frame = 1
Query: 127 EFYISVSFVGTWTPARQDVFHSAASRWAEVI------------THVPCGGNREHPPG--ELLITATLDTIDGVGGTLGSAGPDLVWTDCNTISLTGSMTFDIADVAAMEADGILKGVVLHEMGHVIGVG 471
F I+V F G T ++Q F SAA+RWA+VI G+ + G +L+I A + IDGVGG LGSAGP +V + + + G M FD AD+A++EADG+L VVLHEMGHV+G+G
Sbjct: 112 SFAINVRFNGALTSSQQAAFSSAATRWAQVIKTGLADQTINASADACAAGHPDFVGGVDDLMIDAIVTPIDGVGGVLGSAGPCVVRS--GGLPIYGVMQFDSADLASLEADGLLSTVVLHEMGHVLGIG 238
BLAST of mRNA_S-dermatodea_contig11862.1166.1 vs. uniprot
Match: UPI00166CECCE (peptidase n=1 Tax=Deinococcus roseus TaxID=392414 RepID=UPI00166CECCE) HSP 1 Score: 95.1 bits (235), Expect = 1.160e-20 Identity = 52/108 (48.15%), Postives = 70/108 (64.81%), Query Frame = 1
Query: 163 TPARQDVFHSAASRWAEVITH-VPCGGNREHPPG----ELLITATLDTIDGVGGTLGSAGPDLVWTDCNTISLTGSMTFDIADVAAMEADGILKGVVLHEMGHVIGVG 471
TPA++ F+ AA+RW+ VI +P + +L ITA+ +IDGVG LG AGPDLV D + +TG+M FD AD+ MEA+G L GV+LHEMGHV+G+G
Sbjct: 53 TPAQKTAFYDAANRWSSVIAAGLPDASGTINGQSLKVDDLQITASAVSIDGVGKVLGRAGPDLVRNDTG-LPITGTMEFDSADLKLMEANGTLSGVILHEMGHVLGIG 159
BLAST of mRNA_S-dermatodea_contig11862.1166.1 vs. uniprot
Match: A0A511NAJ7_9DEIO (Peptidase n=1 Tax=Deinococcus cellulosilyticus NBRC 106333 = KACC 11606 TaxID=1223518 RepID=A0A511NAJ7_9DEIO) HSP 1 Score: 94.4 bits (233), Expect = 3.050e-20 Identity = 50/107 (46.73%), Postives = 70/107 (65.42%), Query Frame = 1
Query: 163 TPARQDVFHSAASRWAEVITH----VPCGGNREHPPGELLITATLDTIDGVGGTLGSAGPDLVWTDCNTISLTGSMTFDIADVAAMEADGILKGVVLHEMGHVIGVG 471
T +++ +F AASRW +VITH + GG +L+I A+ IDGVGG LG AGP+ + + N++ L+G M FD AD++ ME GIL V+LHEMGHV+G+G
Sbjct: 78 TTSQKAIFEQAASRWEQVITHGLSNINDGGTIYD---DLVIKASAVAIDGVGGILGQAGPEFI-RNSNSLPLSGIMQFDSADLSNMETSGILYNVILHEMGHVLGIG 180
BLAST of mRNA_S-dermatodea_contig11862.1166.1 vs. uniprot
Match: A0A511N4R6_9DEIO (Uncharacterized protein n=1 Tax=Deinococcus cellulosilyticus NBRC 106333 = KACC 11606 TaxID=1223518 RepID=A0A511N4R6_9DEIO) HSP 1 Score: 93.6 bits (231), Expect = 4.010e-20 Identity = 51/107 (47.66%), Postives = 67/107 (62.62%), Query Frame = 1
Query: 154 GTWTPARQDVFHSAASRWAEVITH-VPCGGNREHPPGELLITATLDTIDGVGGTLGSAGPDLVWTDCNTISLTGSMTFDIADVAAMEADGILKGVVLHEMGHVIGVG 471
G+ T ++ F AASRW++VIT +P +L ITAT TIDG G LG AGP+ + N + +TG M FD AD+ ME +G LKGV+LHEMGHV+G+G
Sbjct: 50 GSLTTVQKAAFQEAASRWSQVITAGLPDVTMNGQTIDDLRITATAITIDGAGKILGRAGPEFLRNGSN-LPITGIMEFDAADLKMMEQNGTLKGVILHEMGHVLGIG 155
BLAST of mRNA_S-dermatodea_contig11862.1166.1 vs. uniprot
Match: A0A4P5WZA4_9BACT (Uncharacterized protein n=1 Tax=Planctomycetia bacterium TaxID=2052181 RepID=A0A4P5WZA4_9BACT) HSP 1 Score: 94.7 bits (234), Expect = 1.170e-19 Identity = 52/125 (41.60%), Postives = 75/125 (60.00%), Query Frame = 1
Query: 109 DTSFLAEFYISVSFVGTWTPARQDVFHSAASRWAEVITHVPCGGNREHPPG----ELLITATLDTIDGVGGTLGSAGPDLVWTDCNTISLTGSMTFDIADVAAMEADGILKGVVLHEMGHVIGVG 471
D + + ++V +VG +T A++ F +AA+RW++VIT G P G ++ I A++ IDG G LG AGP T + G M FD ADVAAME+DG +GV++HEMGHV+G+G
Sbjct: 259 DEADTPGYQVTVVYVGAFTAAQRSAFDAAAARWSQVITGDLPGVTL--PGGTFVDDVQIEASIVPIDGANGILGQAGPTDFRTGVAGLPYAGVMEFDTADVAAMESDGTFRGVIMHEMGHVLGLG 381 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11862.1166.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11862.1166.1 >prot_S-dermatodea_contig11862.1166.1 ID=prot_S-dermatodea_contig11862.1166.1|Name=mRNA_S-dermatodea_contig11862.1166.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=158bp ECNPNPCLNGGSCERDVGGGHVCSCPYVYGGMACQTDTSFLAEFYISVSFback to top mRNA from alignment at S-dermatodea_contig11862:5940..7146+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11862.1166.1 ID=mRNA_S-dermatodea_contig11862.1166.1|Name=mRNA_S-dermatodea_contig11862.1166.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1207bp|location=Sequence derived from alignment at S-dermatodea_contig11862:5940..7146+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11862:5940..7146+ >mRNA_S-dermatodea_contig11862.1166.1 ID=mRNA_S-dermatodea_contig11862.1166.1|Name=mRNA_S-dermatodea_contig11862.1166.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=948bp|location=Sequence derived from alignment at S-dermatodea_contig11862:5940..7146+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |