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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Model size | 420 |
| Cds size | 165 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622924219.5654078-UTR-S-dermatodea_contig11850:1846..2101 | 1622924219.5654078-UTR-S-dermatodea_contig11850:1846..2101 | Saccorhiza dermatodea SderLu1190fm monoicous | UTR | S-dermatodea_contig11850 1847..2101 + |
| 1694079101.924562-UTR-S-dermatodea_contig11850:1846..2101 | 1694079101.924562-UTR-S-dermatodea_contig11850:1846..2101 | Saccorhiza dermatodea SderLu1190fm monoicous | UTR | S-dermatodea_contig11850 1847..2101 + |
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11850.1157.1 >prot_S-dermatodea_contig11850.1157.1 ID=prot_S-dermatodea_contig11850.1157.1|Name=mRNA_S-dermatodea_contig11850.1157.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=55bp
MPQSASCSVSLRTVASADPRPDGVEDVLNVCPRQAARFGGRHLRLAWIRS
APDAA back to topmRNA from alignment at S-dermatodea_contig11850:1847..4550+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig11850.1157.1 ID=mRNA_S-dermatodea_contig11850.1157.1|Name=mRNA_S-dermatodea_contig11850.1157.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2704bp|location=Sequence derived from alignment at S-dermatodea_contig11850:1847..4550+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GATAGAGGAAGAGCGGCTGTTGTTGCTCTCTCGCTGACCGCTGTCGGCAC
ACCACACGGACACCACACACACACACACACACGCAAAGGGGTTTGCATCT
TTTTGGCTTGGTCGGGTGTGGAGTGGGGAAAGGAAGGAAGGAAGGAAGGA
AGGAAGGAAGGAAGAGGAGAGGAGAGGAGCCGTGGTGTGACCTCCTGTCC
TCGCGGGGTGGTGGAGCAACGGAGATAGGCAGGAAGACAGGAGGAGCTCT
GCACGATGCCTCAGTCGGCTTCCTGTAGCGTTTCGCTTCGTACGGTAGCC
TCGGCGGACCCTCGGCCAGATGGCGTGGAGGACGTGCTCAATGTCTGCCC
TCGTCAAGCCGCACGCTTTGGTGAGTGTGCCAGTTGGCGCTGGTGGGCGG
GAGAGGAGGGGAGAGGAGGACGTTGATATGTTATTGCTTGTGAGTCGACC
GACCGATACTCGTACTTGTACTTCTACAGGTAGCTGTCTTCCATGGTTTG
GTGCTTCTCTGCGGTGGTATGATATGATACTATTATAGCACTCGTAATAA
CGTGTGCATCCGACATGCCGCAATGGTCTCTTGTGTGTGTGCGCGGTGAT
GCCGCGTCGGGGGAAGGCTGGGACCAGTGTTCAGTGTTCAGCCCTTTGGA
AAAAGACCTTGTGTGGTACAGTAGTATGTATGCAACCTATGTACATTATA
CTAGTTGTCCTGCTGTTTGTGGGGTTGATTGTTGCCCGTGCTGCCTGGGC
ACGAGAGGGTGAAGACGGCATGACGCGTGCCGCCCGTGTCCTGCCTCCGT
TATTTCCCGACTATATAATTGCAAGTGAATATACTGTATCATAGGTGGTA
TGATATTTGCGCCGCACACGAGCTGTACTGCTGTGCAAAGACGGAGGTTG
TAGTGTAGGGTAAGTTATACGTGTAATTTGGGGCAGGGGGGTACAACCAA
CAGCATTTGTACAATATTAATAGTAGCATTTTAAAAGCTACTTGTTCTTG
CAGCTGTTTTCCCTGTCTCACGCGTACATACTTCTGTTACGCATGTACAA
GTATCACTACTACTGCTGTGCTATCCCCTCTACTGGAGAACGAACAACAA
AGGAGACGTGTGCGTCTCGGGCAAATGCTACGCCATCCCGGGCCACCCGC
GACAGACCGGCTGCCTGGGCAGCCAGTTGCCAAGCTGCCAAGGATGCTGT
ATTCTGAGACGCCCCGGTTTTTGCCTGCCTCCCCAAGCACAGAGCAGAAA
TGCTTACACCACGGCAGACAATTTTGATGCCTTTGCACTGCTGTTACATT
TTTTACAGCGCCAGAAGGACGCGCGGAGAGGAGCCGCGCTGCACGTAGCG
GCATTGCCGGGGCACGAGCGGTCATATGATGGGACGATTGATTTGATTCC
TCGCTAGAGACTATAGCAGAACAACGTGCATACTTAGAAGTATGATAGTG
TGATCGAAAGAACAAACCAACGGAGGCCCCGCTTGGGAGCAGTTGTTTAG
CGCAGCCAAAGCGGGGTTTGCAGTTGGATGCAAAACCTCCCTTCGGCTCT
GGCCACGGAGGCATGCCTGTTTCGCAGCACCGACACCGGGCCTCGGTAAA
ATAGCAAGGATGCACAAATTACAGCTCCGAAGCCGGCGGGGGGCGCCCTG
CGTAGTCCTGCGTGTGCCATTTCCCTGGCGCAGCGGTGGGCGGATTGATC
TGGGTGCCGCTCGCTGTCCGGAGGGTATGCGTCGCCGCTTGCGCGTTTCG
CGCTTCGTTCGCGAGCTGCGTTTCCGCTCTGCTCGGCTCTGTTCTGCTCT
GTTAGGTCCTGCTGTATGATAATTTTGCCTACAGCAGTACTACTGTAATG
CCTCTTGCAGTGTCGCTTAGCGGCTACGCCTTCGTTTTTTGTCTGTCCTG
CCCTGGTGGGCTTATTTCTTATTTTCCTCGGGCGGCAAGGTCGCTGCTCC
TCCTACTGCCGCTTGCCACCCCGTTTTATCAAGAGGAGAGATAAATGTAC
ATGTCTGAGCTGGGGAAAAAATGAAGCCTGTGACAGAGACACTTTTGAGG
CATGGGACAGCCAGACGAAGGCGGTATACTAGCTATACTGGGGGATAAGA
AGTGGCCTGAGAAGGCGAGAAATTATGTAGACCGGATAGGAAAAGCATTT
TGCACCACCTTTGGCAGAGTAGGAAGGAACGATTGGCCGTCGGCGATAGA
TCGATCCTGTGGGAGCAATGCTCCGTTCTCTCGACGACGTGTGGCCAATG
TCTAACAGCTAATGCATGCAAAACATGAGTACATGAGTACGCCCCTTCCC
CCACCCCCCCCCTCCATGGAACGAAGTAAAACGGTAGCGCCCGTGGCATC
CGCACCTTCGTGACACAAAACGAAACAATTTCCGTTTTTATACGGCCCGA
TTCTTGATGCTACTATAACCTTGCTCGTATTTCTCCCCCCTTCCCCCTTC
CCCCGTTACCTGGGTGGTGGCCGCAAGGCGCTCGCCCCATGGCATCGAAA
GCCGCTCTCCTACTACATATAATCGCAGAAATTTTAGAACAACGGCTAAA
AACGGCACGTGACCTCTCTCACCCCCGCGCACCCGACTCGCCTCTGTATT
TATTTTGCACGTAAACACGCAAACATAACATGTCATGTCACGCCGACTTC
ACAGGCGGGCGCCACCTCAGGCTAGCCTGGATACGCTCCGCCCCGGACGC
AGCC back to topCoding sequence (CDS) from alignment at S-dermatodea_contig11850:1847..4550+ >mRNA_S-dermatodea_contig11850.1157.1 ID=mRNA_S-dermatodea_contig11850.1157.1|Name=mRNA_S-dermatodea_contig11850.1157.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=330bp|location=Sequence derived from alignment at S-dermatodea_contig11850:1847..4550+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCCTCAGTCGGCTTCCTGTAGCGTTTCGCTTCGTACGGTAGCCTCGGC
GGACCCTCGGCCAGATGGCGTGGAGGACGTGCTCAATGTCTGCCCTCGTC
AAGCCGCACGCTTTGATGCCTCAGTCGGCTTCCTGTAGCGTTTCGCTTCG
TACGGTAGCCTCGGCGGACCCTCGGCCAGATGGCGTGGAGGACGTGCTCA
ATGTCTGCCCTCGTCAAGCCGCACGCTTTGGCGGGCGCCACCTCAGGCTA
GCCTGGATACGCTCCGCCCCGGACGCAGCCGCGGGCGCCACCTCAGGCTA
GCCTGGATACGCTCCGCCCCGGACGCAGCC back to top
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